NO15G01400.1, NO15G01400.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G01400.1
Unique NameNO15G01400.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1416
Alignment locationchr15:395374..397696 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:395374..397696 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO15G01400.1 vs.
Match: EWM22469.1 (c transferase [Nannochloropsis gaditana])

HSP 1 Score: 694.9 bits (1792), Expect = 1.700e-196
Identity = 334/398 (83.92%), Postives = 366/398 (91.96%), Query Frame = 0 
Query:   63 REQHAICMVCDFFYPRMGGVEMHIWSLAQCLLKLGHKVVIITHAYDDRKGIRYMNNGLKVYYCPLLTFFDQDVWPTLFAFFPLFRSILIREQINVVHTHQATSVMSIECALYARTMGYKLVYTDHSLFGFADAASIHINQVMRFILSDFDHGICVSNTCRENLALRARLHPIMLSTIPNAVDPDKFTPDPSQRRRGDGEDGRINVVIVSRLVYRKGIDLVAKVIPVICARYPRVHFIVGGDGNKKLLLEEMREKHQLQDRVEMLGRVPHVHVRNVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTCVGGVPEVLPPSMTKFAEPTAESIIAAIGAALPLAEKVVPAEFHQRVRHMYSWMDVARRTETVYDRVRESTMPTFAERLWRYSTVGGTVA 461
            R +HA+CMVCDFFYP MGGVEMHIWSLAQCLLKLGHKVV++TH+YD+RKG+RYM NGLKVYYCPLLTF+DQDVWPTLFAFFPLFR ILIRE+I++VHTHQATSVMSIEC LYARTMGYK+VYTDHSLFGFADA SIHINQVMRFILSD DH ICVSNTCRENLALRARLHPI+LSTIPNAVDPDKFTPD  Q RR      RINVV++SRLVYRKGIDLVA+VIP++CAR+P VHFIVGGDGNKKLL+EEMRE+HQLQDRVEMLGRVPH  VR+VLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTCVGGVPEVLPPSM KFA+PT ES+ AAI AALPLA++V PAEFH+RVRHMY+WM+VARRTETVY  VRE++ PT  ERL RY+TVGG VA
Sbjct:    6 RPRHAVCMVCDFFYPSMGGVEMHIWSLAQCLLKLGHKVVVVTHSYDNRKGVRYMQNGLKVYYCPLLTFYDQDVWPTLFAFFPLFRHILIRERISIVHTHQATSVMSIECTLYARTMGYKVVYTDHSLFGFADAGSIHINQVMRFILSDVDHCICVSNTCRENLALRARLHPILLSTIPNAVDPDKFTPDLGQHRRLSTGGDRINVVMISRLVYRKGIDLVARVIPMVCARFPHVHFIVGGDGNKKLLIEEMRERHQLQDRVEMLGRVPHSDVRDVLVRGHIFLNCSLTESFCIAILEAASCGLFVVSTCVGGVPEVLPPSMIKFADPTVESLAAAIEAALPLAKEVAPAEFHRRVRHMYNWMEVARRTETVYHHVREASTPTLMERLRRYNTVGGAVA 403
The following BLAST results are available for this feature:
BLAST of NO15G01400.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22469.11.700e-19683.92c transferase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01400NO15G01400Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G01400.1NO15G01400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G01400.1.cds1NO15G01400.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01400.1.cds2NO15G01400.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01400.1.cds3NO15G01400.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01400.1.cds4NO15G01400.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01400.1.cds5NO15G01400.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01400.1.cds6NO15G01400.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G01400.1 ID=NO15G01400.1|Name=NO15G01400.1|organism=Nannochloropsis oceanica|type=mRNA|length=1416bp
ATGAAGTTCCGTCGTCGTCGCTCGTCCAAAGGTGTCCCATCCGCAGGTGC
CCCGCCACCAACATTCTCCCACTCGTTACTGTCGTCATGGTTTGCGGGAA
AACCTGCGGTCGCAGAAAAGCGGCGGGGTGCGCCTGCGATAGACGCCGCC
ATGAGCGGCATGGGCGCGGGACAAAAGCCGCGACTCAGAGAGCAGCATGC
CATCTGCATGGTGTGCGACTTCTTCTATCCGCGCATGGGGGGAGTGGAGA
TGCACATATGGTCGCTGGCGCAGTGCTTGCTAAAACTGGGCCACAAAGTT
GTTATTATTACCCACGCCTACGACGACCGCAAGGGCATCCGGTACATGAA
CAATGGACTCAAGGTGTATTACTGTCCACTACTAACCTTCTTCGACCAAG
ACGTATGGCCTACTCTTTTTGCATTTTTCCCTCTTTTCCGGTCTATCTTG
ATTCGGGAACAGATCAACGTCGTCCATACGCACCAAGCCACATCAGTCAT
GAGCATTGAGTGTGCATTGTACGCCCGGACCATGGGCTACAAACTGGTCT
ACACAGATCATTCTTTGTTCGGCTTTGCAGACGCCGCTAGTATCCACATC
AACCAGGTCATGCGCTTCATCCTCTCTGATTTCGACCACGGCATATGCGT
CTCCAACACCTGTCGCGAGAATCTCGCGCTGCGAGCTCGCCTTCACCCCA
TCATGCTTTCAACTATTCCCAATGCGGTGGACCCAGACAAGTTTACACCA
GATCCCAGCCAACGCCGGCGCGGCGACGGGGAGGACGGCCGGATCAATGT
GGTGATTGTCAGTCGGCTTGTATACCGGAAAGGTATCGATTTGGTTGCCA
AGGTCATCCCAGTCATTTGTGCGCGATACCCACGAGTCCATTTCATAGTT
GGTGGCGACGGGAACAAAAAACTGCTTTTAGAGGAGATGCGAGAGAAGCA
CCAGTTGCAAGATCGCGTCGAGATGCTGGGCCGCGTGCCGCACGTACATG
TTCGCAACGTCTTAGTGCGGGGCCATATTTTCCTAAATTGCTCCTTGACT
GAGTCATTCTGTATCGCAATTCTCGAAGCAGCTAGCTGCGGCCTGTTTGT
CGTTAGCACCTGCGTGGGCGGCGTCCCGGAGGTGCTCCCTCCGTCCATGA
CCAAGTTCGCGGAGCCCACAGCCGAATCTATAATTGCAGCGATCGGTGCT
GCGTTGCCATTGGCCGAAAAGGTCGTGCCAGCCGAGTTCCATCAGCGGGT
TCGACATATGTATAGTTGGATGGACGTCGCGCGGCGAACTGAAACTGTCT
ATGACCGTGTGCGCGAGTCGACTATGCCCACGTTTGCTGAGCGTCTGTGG
CGCTACAGCACGGTTGGGGGCACGGTTGCAGCGATCATGGCCGAAGATAG
CACGATCGCTCAGTAA
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protein sequence of NO15G01400.1

>NO15G01400.1-protein ID=NO15G01400.1-protein|Name=NO15G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bp
MKFRRRRSSKGVPSAGAPPPTFSHSLLSSWFAGKPAVAEKRRGAPAIDAA
MSGMGAGQKPRLREQHAICMVCDFFYPRMGGVEMHIWSLAQCLLKLGHKV
VIITHAYDDRKGIRYMNNGLKVYYCPLLTFFDQDVWPTLFAFFPLFRSIL
IREQINVVHTHQATSVMSIECALYARTMGYKLVYTDHSLFGFADAASIHI
NQVMRFILSDFDHGICVSNTCRENLALRARLHPIMLSTIPNAVDPDKFTP
DPSQRRRGDGEDGRINVVIVSRLVYRKGIDLVAKVIPVICARYPRVHFIV
GGDGNKKLLLEEMREKHQLQDRVEMLGRVPHVHVRNVLVRGHIFLNCSLT
ESFCIAILEAASCGLFVVSTCVGGVPEVLPPSMTKFAEPTAESIIAAIGA
ALPLAEKVVPAEFHQRVRHMYSWMDVARRTETVYDRVRESTMPTFAERLW
RYSTVGGTVAAIMAEDSTIAQ*
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mRNA from alignment at chr15:395374..397696-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G01400.1 ID=NO15G01400.1|Name=NO15G01400.1|organism=Nannochloropsis oceanica|type=mRNA|length=2323bp|location=Sequence derived from alignment at chr15:395374..397696- (Nannochloropsis oceanica)
ATGAAGTTCCGTCGTCGTCGCTCGTCCAAAGGTGTCCCATCCGCAGGTGC
CCCGCCACCAACATTCTCCCACTCGTTACTGTCGTCATGGTTTGCGGGAA
AACCTGCGGTCGCAGAAAAGCGGCGGGGTGCGCCTGCGATAGACGCCGCC
ATGAGCGGCATGGGCGCGGGACAAAAGCCGCGACTCAGAGAGCAGCATGC
CATCTGCATGGTGTGCGACTTCTTCTATCCGCGCATGGGGGTACGTTTTG
TATTCATTTTTTTGATTAATGGTATGAAACCATGCTTGTTGCCCACTCTG
CGAGCCTGTTCTCATCATTTGAATGATCATCTCACATCAAAATATCCTTA
CTATATATATATATATACTGCTTATCACATCAGGGAGTGGAGATGCACAT
ATGGTCGCTGGCGCAGTGCTTGCTAAAACTGGGCCACAAAGTTGTTATTA
TTACCCACGCCTACGACGACCGCAAGTAAGTATGGCGAGAAGGGCTGAGT
ACTTCAAATAGACGGAGAATTTTGCGTTCAACTTTTCCACCCATATACAC
ACGTACTCACTTTTTTACTCCCTTGAGACAACAGGGGCATCCGGTACATG
AACAATGGACTCAAGGTGTATTACTGTCCACTACTAACCTTCTTCGACCA
AGACGTATGGCCTACTCTTTTTGCATTTTTCCCTCTTTTCCGGTCTATCT
TGATTCGGGAACAGATCAACGTCGTCCATACGCACCAAGCCACATCAGTC
ATGAGCATTGAGTGTGCATTGTACGCCCGGACCATGGGGTACGTTATTGA
GTATAGGCTGTACATTTGACGTGTCTCGCGGCTGGTCTGTGGTCTAGCTT
GCATATTTGAGTATTAATAATAATGAAGTTTGCGAATTGTGCCATGCTTG
TGAGCTCGCATTCTTTCCGTCCTCTGTCTGTATATCGTTTGCTCCAACAT
AAGAGCTCAGCATCAATCTACTTGCGCGCCTAAAATACACAAACTAGCTA
CAAACTGGTCTACACAGATCATTCTTTGTTCGGCTTTGCAGACGCCGCTA
GTATCCACATCAACCAGGTCATGCGCTTCATCCTCTCTGATTTCGACCAC
GGCATATGCGTCTCCAACACCTGTCGCGAGAATCTCGCGCTGCGAGCTCG
CCTTCACCCCATCATGCTTTCAACTATTCCCAATGCGGTGGACCCAGACA
AGTTTACACCAGATCCCAGCCAACGCCGGCGCGGCGACGGGGAGGACGGC
CGGATCAATGTGGTGATTGTCAGTCGGCTTGTATACCGGAAAGGTATCGA
TTTGGTTGCCAAGGTCATCCCAGTCATTTGTGCGCGATACCCACGAGTCC
ATTTCATAGTTGGTGGCGACGGGAACAAAAAACTGCTTTTAGAGGAGATG
CGAGAGAAGCACCAGTTGCAAGATCGCGTCGAGATGCTGGGCCGCGTGCC
GCACGTACATGTTCGCAACGTCTTAGTGCGGGGCCATATTTTCCTAAATT
GCTCCTTGACTGAGTCATTCTGTATCGCAATTCTCGAAGCAGCTAGCTGC
GGCCTGTTTGTCGTTAGCACCTGCGTGGGCGGCGTCCCGGAGGTGCTCCC
TCCGTCCATGACCAAGTTCGCGGAGCCCACAGCCGAATCTATAATTGCAG
CGATCGGTGCTGCGTTGCCATTGGCCGAAAAGGTCGTGCCAGCCGAGTTC
CATCAGCGGGTGAGTTAATAATTTGGTATTTAGGGAGCTGTTTGTGTGTA
TCTATGTATATGTCCACGCACATCGTCGTATCAATGTGTATTTTTTGCTT
GTGTGCGCTCTGCCTTTGTTTGAATGATGCATCTTGATTTGAATGTTTTA
CTTAGATTATGGTTTGTGTTTATGATTGCGCGATTCCAAATCGCGCGCTT
CTTTCATGTATCCCCGCACAAACGCCTGTAAAGCTTGCATTCGTCATTTG
CTTTTCTGACACGAACAGAACTCGCTCTTAGGCCCTCAATGCTCAGCCTA
CTCAATCCACACTATGTTATATTAGGTTCGACATATGTATAGTTGGATGG
ACGTCGCGCGGCGAACTGAAACTGTCTATGACCGTGTGCGCGAGTCGACT
ATGCCCACGTTTGCTGAGCGTCTGTGGCGCTACAGCACGGTTGGGGGCAC
GGTTGCAGGTTGGCTGTGTTGCTTCACAGTCTCTGTTATATATTTAGTTT
GGCGAATAATAGAATGGGTCTGGCCGCGCGATGGAATCGAATTGGCGAGC
AATTTTCCCACGAGACAACATATGGAGGACCAAAAAAGCGATCATGGCCG
AAGATAGCACGATCGCTCAGTAA
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Coding sequence (CDS) from alignment at chr15:395374..397696-

>NO15G01400.1 ID=NO15G01400.1|Name=NO15G01400.1|organism=Nannochloropsis oceanica|type=CDS|length=1416bp|location=Sequence derived from alignment at chr15:395374..397696- (Nannochloropsis oceanica)
ATGAAGTTCCGTCGTCGTCGCTCGTCCAAAGGTGTCCCATCCGCAGGTGC
CCCGCCACCAACATTCTCCCACTCGTTACTGTCGTCATGGTTTGCGGGAA
AACCTGCGGTCGCAGAAAAGCGGCGGGGTGCGCCTGCGATAGACGCCGCC
ATGAGCGGCATGGGCGCGGGACAAAAGCCGCGACTCAGAGAGCAGCATGC
CATCTGCATGGTGTGCGACTTCTTCTATCCGCGCATGGGGGGAGTGGAGA
TGCACATATGGTCGCTGGCGCAGTGCTTGCTAAAACTGGGCCACAAAGTT
GTTATTATTACCCACGCCTACGACGACCGCAAGGGCATCCGGTACATGAA
CAATGGACTCAAGGTGTATTACTGTCCACTACTAACCTTCTTCGACCAAG
ACGTATGGCCTACTCTTTTTGCATTTTTCCCTCTTTTCCGGTCTATCTTG
ATTCGGGAACAGATCAACGTCGTCCATACGCACCAAGCCACATCAGTCAT
GAGCATTGAGTGTGCATTGTACGCCCGGACCATGGGCTACAAACTGGTCT
ACACAGATCATTCTTTGTTCGGCTTTGCAGACGCCGCTAGTATCCACATC
AACCAGGTCATGCGCTTCATCCTCTCTGATTTCGACCACGGCATATGCGT
CTCCAACACCTGTCGCGAGAATCTCGCGCTGCGAGCTCGCCTTCACCCCA
TCATGCTTTCAACTATTCCCAATGCGGTGGACCCAGACAAGTTTACACCA
GATCCCAGCCAACGCCGGCGCGGCGACGGGGAGGACGGCCGGATCAATGT
GGTGATTGTCAGTCGGCTTGTATACCGGAAAGGTATCGATTTGGTTGCCA
AGGTCATCCCAGTCATTTGTGCGCGATACCCACGAGTCCATTTCATAGTT
GGTGGCGACGGGAACAAAAAACTGCTTTTAGAGGAGATGCGAGAGAAGCA
CCAGTTGCAAGATCGCGTCGAGATGCTGGGCCGCGTGCCGCACGTACATG
TTCGCAACGTCTTAGTGCGGGGCCATATTTTCCTAAATTGCTCCTTGACT
GAGTCATTCTGTATCGCAATTCTCGAAGCAGCTAGCTGCGGCCTGTTTGT
CGTTAGCACCTGCGTGGGCGGCGTCCCGGAGGTGCTCCCTCCGTCCATGA
CCAAGTTCGCGGAGCCCACAGCCGAATCTATAATTGCAGCGATCGGTGCT
GCGTTGCCATTGGCCGAAAAGGTCGTGCCAGCCGAGTTCCATCAGCGGGT
TCGACATATGTATAGTTGGATGGACGTCGCGCGGCGAACTGAAACTGTCT
ATGACCGTGTGCGCGAGTCGACTATGCCCACGTTTGCTGAGCGTCTGTGG
CGCTACAGCACGGTTGGGGGCACGGTTGCAGCGATCATGGCCGAAGATAG
CACGATCGCTCAGTAA
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Synonyms
Publications