NO15G01210.1, NO15G01210.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G01210.1
Unique NameNO15G01210.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1227
Alignment locationchr15:343744..345567 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:343744..345567 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO15G01210.1 vs.
Match: EWM22420.1 (Methyltransferase type 11 [Nannochloropsis gaditana])

HSP 1 Score: 653.3 bits (1684), Expect = 5.000e-184
Identity = 322/409 (78.73%), Postives = 355/409 (86.80%), Query Frame = 0 
Query:    1 MRVAFILAGVL-LSNVAEGFLSPKVPGVTSLTHVTKSRPSSRTTFTASHLDPSSLESVSKVASGPASRLVASLLATTSSFSAGNILKTLPLVGGLVILGLLALRLPGAVALGWRSYNKEENSVGREYDAWTREKILEHYWGEHIHLGYYTEEEQKGGYLKKDFIGAKYDFIDRMMAFAKLDGQQFKPAKVLDVGCGIGGTTRYIAKKLGTGSQVSGITLSSEQVRRANELAQEQDIENAEFQVMDALKMTYPDNSFDLVWACESGEHMPDKKAYVEEMVRVLKPGGTLVIACWCQRDAKEVPLSKSEQSRVDFMCTEWSHPYFISIKDFEGLAAGTGVMENVRSEDWAKFTIPSWRHSVWVGVFDPFFWMLRPHLWIKILRDAFTLNVFHNAFKDGLMGYGMIYAQKKK 409
            M+V  ++ G+L L +  + FLSP V    ++    K+R +S T+  A      SL++ S V   PASRL+ +LL  TS+F A +I+K+LP++G LV+ GLLA RLPG +A GWRSYNKEENSVGREYDAWTREKILEHYWGEHIHLGYYTEE+QK GYLKK+FIGAKYDFIDRMMAFAKLDGQ FKPAKVLDVGCGIGGTTRYIAKKLGT SQVSGITLS EQVRRA ELA+EQD+ NAEFQVMDAL M+YPDNSFDLVWACESGEHMPDKKAYVEEMVRVLKPGGTLVIACWCQRDAK  PLS+SEQ RVDFMCTEWSHPYFISI+DFE LA GTGVMENVR+EDWAKFT+PSWRHSVWVGVFDPFFWMLRPHLW+KILRDAFTLNVFHNAFKDGLMGYGMIYAQKKK
Sbjct:    1 MKVTLLVWGLLFLPDSVQSFLSPGVHRAAAMNLPGKTRLTS-TSSGAIQPVRRSLQASSSVVKKPASRLMVNLLTATSTFGASSIIKSLPILGTLVVAGLLAARLPGVIARGWRSYNKEENSVGREYDAWTREKILEHYWGEHIHLGYYTEEDQKAGYLKKNFIGAKYDFIDRMMAFAKLDGQTFKPAKVLDVGCGIGGTTRYIAKKLGTTSQVSGITLSQEQVRRAKELAEEQDVTNAEFQVMDALHMSYPDNSFDLVWACESGEHMPDKKAYVEEMVRVLKPGGTLVIACWCQRDAKAFPLSRSEQKRVDFMCTEWSHPYFISIQDFERLALGTGVMENVRTEDWAKFTLPSWRHSVWVGVFDPFFWMLRPHLWVKILRDAFTLNVFHNAFKDGLMGYGMIYAQKKK 408
The following BLAST results are available for this feature:
BLAST of NO15G01210.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22420.15.000e-18478.73Methyltransferase type 11 [Nannochloropsis gaditan... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01210NO15G01210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G01210.1NO15G01210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G01210.1.cds1NO15G01210.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01210.1.cds2NO15G01210.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01210.1.cds3NO15G01210.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01210.1.cds4NO15G01210.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01210.1.cds5NO15G01210.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G01210.1.cds6NO15G01210.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G01210.1 ID=NO15G01210.1|Name=NO15G01210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1227bp
ATGAGGGTAGCTTTCATTCTTGCAGGGGTACTGCTTTCTAATGTGGCAGA
AGGCTTCCTCTCACCAAAGGTACCTGGAGTGACATCCCTGACCCACGTGA
CTAAGTCGCGACCGTCGTCAAGAACGACCTTCACCGCTAGTCACCTTGAT
CCTTCCTCCCTGGAATCCGTCAGCAAAGTGGCGAGTGGCCCTGCCTCGCG
GCTGGTGGCAAGCCTGTTAGCCACCACAAGCAGCTTCAGCGCCGGCAACA
TTCTCAAGACGCTGCCCTTGGTAGGCGGCCTTGTGATCTTGGGCTTGCTG
GCGCTACGCCTGCCGGGCGCTGTTGCCCTCGGCTGGCGATCGTACAACAA
GGAAGAGAACTCGGTGGGCCGGGAGTACGATGCCTGGACACGGGAAAAGA
TCCTTGAGCACTACTGGGGGGAGCACATCCACCTGGGTTACTATACCGAG
GAGGAGCAGAAAGGCGGGTACCTGAAGAAGGATTTTATTGGCGCCAAATA
CGACTTTATTGACCGGATGATGGCTTTTGCCAAGCTGGACGGACAACAGT
TCAAGCCGGCGAAGGTCTTGGACGTGGGCTGCGGCATCGGCGGCACAACG
CGCTATATCGCCAAGAAACTGGGCACGGGCTCGCAGGTCTCCGGCATCAC
ACTGTCCTCGGAGCAGGTCCGTCGCGCCAACGAACTCGCTCAGGAGCAGG
ACATCGAGAACGCCGAGTTCCAAGTCATGGATGCTCTCAAGATGACCTAC
CCGGATAATAGCTTCGACCTAGTGTGGGCGTGCGAGTCAGGGGAGCACAT
GCCCGACAAAAAGGCCTACGTGGAAGAGATGGTGCGCGTCCTCAAACCGG
GCGGGACGCTGGTCATCGCCTGCTGGTGCCAGCGCGACGCCAAGGAGGTG
CCATTGTCCAAGTCGGAGCAGTCGCGCGTCGATTTCATGTGCACAGAGTG
GAGCCACCCTTACTTCATCTCCATCAAGGACTTCGAGGGGCTTGCGGCCG
GCACGGGCGTTATGGAGAACGTGCGCTCCGAGGATTGGGCTAAGTTCACC
ATCCCCAGCTGGCGCCACTCTGTCTGGGTCGGCGTCTTCGATCCCTTCTT
CTGGATGCTGCGGCCGCACCTATGGATCAAGATCTTGCGCGACGCCTTCA
CTTTAAATGTGTTCCACAACGCCTTCAAGGACGGGCTCATGGGCTACGGC
ATGATCTACGCACAAAAGAAGAAGTAA
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protein sequence of NO15G01210.1

>NO15G01210.1-protein ID=NO15G01210.1-protein|Name=NO15G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bp
MRVAFILAGVLLSNVAEGFLSPKVPGVTSLTHVTKSRPSSRTTFTASHLD
PSSLESVSKVASGPASRLVASLLATTSSFSAGNILKTLPLVGGLVILGLL
ALRLPGAVALGWRSYNKEENSVGREYDAWTREKILEHYWGEHIHLGYYTE
EEQKGGYLKKDFIGAKYDFIDRMMAFAKLDGQQFKPAKVLDVGCGIGGTT
RYIAKKLGTGSQVSGITLSSEQVRRANELAQEQDIENAEFQVMDALKMTY
PDNSFDLVWACESGEHMPDKKAYVEEMVRVLKPGGTLVIACWCQRDAKEV
PLSKSEQSRVDFMCTEWSHPYFISIKDFEGLAAGTGVMENVRSEDWAKFT
IPSWRHSVWVGVFDPFFWMLRPHLWIKILRDAFTLNVFHNAFKDGLMGYG
MIYAQKKK*
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mRNA from alignment at chr15:343744..345567-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G01210.1 ID=NO15G01210.1|Name=NO15G01210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1824bp|location=Sequence derived from alignment at chr15:343744..345567- (Nannochloropsis oceanica)
ATGAGGGTAGCTTTCATTCTTGCAGGGGTACTGCTTTCTAATGTGGCAGA
AGGCTTCCTCTCACCAAAGGTACCTGGAGTGACATCCCTGACCCACGTGA
CTAAGTCGCGACCGTCGTCAAGGTGAGTGTGCCTGGGTGGATGGGTGCGG
ATGCAAGATCGGATACTGCCGACTACATCTACATGGTATGGCACGCATAC
ATACGTCATAGCATCGTTATCATGACCGTTCCCCTTCTCCTCCCCCCCTC
TTACAAACATAGAACGACCTTCACCGCTAGTCACCTTGATCCTTCCTCCC
TGGAATCCGTCAGCAAAGTGGCGAGTGGCCCTGCCTCGCGGCTGGTGGCA
AGCCTGTTAGCCACCACAAGCAGCTTCAGCGCCGGCAACATTCTCAAGAC
GCTGCCCTTGGTAGGCGGCCTTGTGATCTTGGGCTTGCTGGCGCTACGCC
TGCCGGGCGCTGTTGCCCTCGGCTGGCGATCGTACAACAAGGAAGAGAAC
TCGGTGGGCCGGGAGTACGATGCCTGGACACGGGAAAAGATCCTTGAGCA
CTACTGGGGGGAGCACATCCACCTGGGTTACTATACCGAGGAGGAGCAGA
AAGGCGGGTACCTGAAGAAGGATTTTATTGGCGCCAAATACGACTTTATT
GACCGGATGATGGCTTTTGCCAAGCTGGACGGACAACAGTTCAAGCCGGC
GAAGGTCTTGGACGTGGGCTGCGGCATCGGCGGCACAACGCGCTATATCG
CCAAGGTGAGATTGAGAATGGGAAAGGGTAGAGGAGAAATGTAGGAGATG
CTAGCGTGTATTGACTGAGTGAGCAGTTGGGGCCCATGTTATTTGAGTTA
ATGCACTTCTCTCATTCTCCAATAAAACAGAAACTGGGCACGGGCTCGCA
GGTCTCCGGCATCACACTGTCCTCGGAGCAGGTCCGTCGCGCCAACGAAC
TCGCTCAGGAGCAGGACATCGAGAACGCCGAGTTCCAAGTCATGGATGCT
CTCAAGATGACCTACCCGGTACGTGGCTCAGCAACGGGAAGTATGGATTG
GGGAGATTCGAAGAGTGACGAGAAAAGAGAGGAGAGGGTATGACGTCTGG
ATCGGCTGATTTTTCCTTGTCCGCCACCACTAACAGGATAATAGCTTCGA
CCTAGTGTGGGCGTGCGAGTCAGGGGAGCACATGCCCGACAAAAAGGCCT
ACGTGGAAGAGATGGTGCGCGTCCTCAAACCGGGCGGGACGCTGGTCATC
GCCTGCTGGTGCCAGGTACGGCGACGAACAAGAGGGTCTATCACTCCACT
TTTTCAGGCGAGAGACCAACGTTTCCCCCTCATTATCCCCCCCAGCGCGA
CGCCAAGGAGGTGCCATTGTCCAAGTCGGAGCAGTCGCGCGTCGATTTCA
TGTGCACAGAGTGGAGCCACCCTTACTTCATCTCCATCAAGGACTTCGAG
GGGCTTGCGGCCGGCACGGGCGTTATGGAGAACGTGCGCTCCGAGGATTG
GGCTAAGTTCACCATCCCCAGCTGGCGCCACTCTGTCTGGGTCGGCGTCT
TCGATCCCTTCTTCTGGATGCTGCGGCCGCACCTATGGTACGTACAAGGG
TCGAGGGGTGGAAGGGAAATATTGCGCCAGTGTCTTACTGCGCAGCGGCA
GCCGCCGCCTGCATTTTCCTCTCGATCCATGACCTGACGACTCTCCTCCA
CCCTGCTCCATGTCTTCACAGGATCAAGATCTTGCGCGACGCCTTCACTT
TAAATGTGTTCCACAACGCCTTCAAGGACGGGCTCATGGGCTACGGCATG
ATCTACGCACAAAAGAAGAAGTAA
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Coding sequence (CDS) from alignment at chr15:343744..345567-

>NO15G01210.1 ID=NO15G01210.1|Name=NO15G01210.1|organism=Nannochloropsis oceanica|type=CDS|length=1227bp|location=Sequence derived from alignment at chr15:343744..345567- (Nannochloropsis oceanica)
ATGAGGGTAGCTTTCATTCTTGCAGGGGTACTGCTTTCTAATGTGGCAGA
AGGCTTCCTCTCACCAAAGGTACCTGGAGTGACATCCCTGACCCACGTGA
CTAAGTCGCGACCGTCGTCAAGAACGACCTTCACCGCTAGTCACCTTGAT
CCTTCCTCCCTGGAATCCGTCAGCAAAGTGGCGAGTGGCCCTGCCTCGCG
GCTGGTGGCAAGCCTGTTAGCCACCACAAGCAGCTTCAGCGCCGGCAACA
TTCTCAAGACGCTGCCCTTGGTAGGCGGCCTTGTGATCTTGGGCTTGCTG
GCGCTACGCCTGCCGGGCGCTGTTGCCCTCGGCTGGCGATCGTACAACAA
GGAAGAGAACTCGGTGGGCCGGGAGTACGATGCCTGGACACGGGAAAAGA
TCCTTGAGCACTACTGGGGGGAGCACATCCACCTGGGTTACTATACCGAG
GAGGAGCAGAAAGGCGGGTACCTGAAGAAGGATTTTATTGGCGCCAAATA
CGACTTTATTGACCGGATGATGGCTTTTGCCAAGCTGGACGGACAACAGT
TCAAGCCGGCGAAGGTCTTGGACGTGGGCTGCGGCATCGGCGGCACAACG
CGCTATATCGCCAAGAAACTGGGCACGGGCTCGCAGGTCTCCGGCATCAC
ACTGTCCTCGGAGCAGGTCCGTCGCGCCAACGAACTCGCTCAGGAGCAGG
ACATCGAGAACGCCGAGTTCCAAGTCATGGATGCTCTCAAGATGACCTAC
CCGGATAATAGCTTCGACCTAGTGTGGGCGTGCGAGTCAGGGGAGCACAT
GCCCGACAAAAAGGCCTACGTGGAAGAGATGGTGCGCGTCCTCAAACCGG
GCGGGACGCTGGTCATCGCCTGCTGGTGCCAGCGCGACGCCAAGGAGGTG
CCATTGTCCAAGTCGGAGCAGTCGCGCGTCGATTTCATGTGCACAGAGTG
GAGCCACCCTTACTTCATCTCCATCAAGGACTTCGAGGGGCTTGCGGCCG
GCACGGGCGTTATGGAGAACGTGCGCTCCGAGGATTGGGCTAAGTTCACC
ATCCCCAGCTGGCGCCACTCTGTCTGGGTCGGCGTCTTCGATCCCTTCTT
CTGGATGCTGCGGCCGCACCTATGGATCAAGATCTTGCGCGACGCCTTCA
CTTTAAATGTGTTCCACAACGCCTTCAAGGACGGGCTCATGGGCTACGGC
ATGATCTACGCACAAAAGAAGAAGTAA
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Synonyms
Publications