NO15G00640.1, NO15G00640.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G00640.1
Unique Name	NO15G00640.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3203
Alignment location	chr15:212330..216105 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:212330..216105 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G00640.1 vs.
Match: EWM22523.1 (helicase sen1, partial [Nannochloropsis gaditana])

HSP 1 Score: 742.7 bits (1916), Expect = 1.600e-210
Identity = 429/685 (62.63%), Postives = 489/685 (71.39%), Query Frame = 0

Query:  287 VRMGRFSSDKVRVVSLDQQVDSLLSEPDASLRQRCLQGRHLLASLKQALALARIKFRMLSRAMEDGWGGREGGREGGRVLPFGWDVRVEDTGVVVFFAPETGQSSLEFPSVPVLGGREGGVDECPGRRLEQLGQYQALCGEVTRIVEQVENLGLEVGRGEIRLQGMGPGAGPERLRGELETNFLDSAHLVFTTLNTAGMPSVCSGNKFTVVVVDEAAQAIEPSTLIPLQTGAQTCVLVGDPQQLPATVFSSLGASTAFERSLFERLEHGGHPVHLLDTQYRMHPLISAFPRLHFYGALLKDGENVFSPSYTRPWHTLTPFQPFTFLNLRSDTDRGAKGGGGGGGGGGLSSSYRNTAEARLIVNVYQTLKREG-GREVKGKVGVITPYQAQLLELNSQFARALGPGYLEEVELNTVDGYQGKEKDIILFSCVRAGGKKGIGFLADVRRMNVGLTRGRLNVLVVGRAETLQQNKHWRALLEHAKRMGAFVSISHPGCNLLAMGKAGEKGREGGRGREQGRGGSGRGGGGRGRGSMSAPRRGQMSLAPPGPPPSPLPSSSSLSRLYPPTSSGSTSSLPPGHPPAAASSSSSSFPSSASTPGPPPASLPPPSLTFSSASVRSFSPPPIDDPIPSQP-SSARARPPPPLPQPNPPFPSRTAISYSPPPSLSPPLSPPRRRARIQHPPSNQ 970
            VRMGRF S+KVR VSLDQQVD+LL EPD SL+ RCLQGR  LA+L QAL LAR ++R L +AM      REGG +GGRVLP+GWD RVED+G V+FFAPETGQ+S +FP++P LGGREGG     GRRLEQLG YQA CGEVTR+VEQ+ENL LEVGRGE+RL GMGPGAGP+RLR ELETN  DSAH+V TTLNTAG  S+ SG +FTVVVVDEAAQAIEPSTLIPLQTGA+TCVLVGDPQQLPATVFSSLGA+TAFERSLFERLEHGGHPVHLLDTQYRMHP ISAFPR +FYG LLKDGENVFSP+Y+RPWH    FQPF FL+L+SD  RG   G  GGGG     SYRN+AEARL+VNVYQTL+RE  G+ V+GKVGVITPYQAQL+EL++QFARALGP Y EEVELNTVDG QGKEKD+ILFSCVRAGGK+GIGFLADVRRMNVGLTRGR+ +LVVGRAETLQQN HW+ALL+HA+  GAFV + HPGCNLL + + G            G+GG   GG G G+     P  G  SL+P  PP  P P+        PP+ S    S  P HPP++                 PP  LPPP L  S          P D  IP        +RPPP  P         + +       L+P    P  RA  +   S +
Sbjct:  150 VRMGRFGSEKVRAVSLDQQVDALLLEPDKSLQNRCLQGRSHLAALTQALVLARHRYRQLVKAM------REGGGQGGRVLPYGWDARVEDSGTVIFFAPETGQTSQDFPTLPALGGREGG-QGLTGRRLEQLGAYQAYCGEVTRLVEQIENLSLEVGRGEVRLLGMGPGAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAFPAFQPFAFLDLKSDGGRGRDKGREGGGG----LSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQRGG------------GKGGGREGGCGGGKEGDKPPATGPASLSPALPPSRP-PAR-------PPSFSPDPGSPTPSHPPSSV----------------PPLPLPPPCLLSS----------PSDMAIPGTALCDDYSRPPPSSPSFQSTCVHESRLLLPSSLLLAPAFPSPPTRAHAKATSSGE 777

The following BLAST results are available for this feature:

BLAST of NO15G00640.1 vs.

BLAST of NO15G00640.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22523.1	1.600e-210	62.63	helicase sen1, partial [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G00640	NO15G00640	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00640.1	NO15G00640.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00640.1.cds1	NO15G00640.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00640.1.cds2	NO15G00640.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00640.1.cds3	NO15G00640.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00640.1.cds4	NO15G00640.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00640.1.cds5	NO15G00640.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:212330..216105-
coding sequence from alignment at chr15:212330..216105-

mRNA sequence

>NO15G00640.1 ID=NO15G00640.1|Name=NO15G00640.1|organism=Nannochloropsis oceanica|type=mRNA|length=3203bp
ATGCTGGTGGGGAGGGAGGGAGGAGGGGAGGGAGGGAGGAGGAAGCTGCG
GGACTGTTACCAATGGGATTTGGTTTTGTTGGTCCGAAAGATGGAGCCCG
TGTGGGAGGCGGTGGGAAAAGCGAGGGGTTACAGGCGGCCCCTCCCTCCC
TCCCTCCCTCCCTCCTCTTCCCCTGAAGAAGCAGAAGAAGGCGAAGTCCC
CCCTCCTTCCTCCTCTCCCGCACCTCCCCTCCCTCCCTCCCTCCCTCTTC
CCCATGCCCAAGGCGTCATTGCCATCGTAAACCCCTTCGGCCGCCAAGGA
GGTAAAATCCACTTCCGTGTGTCCTCTCGGCAGTACCGGCGTCTCCTCTC
CTCCTCCTCCAGCGGAGGGAGCGTGGGAGGGAGGGAGGGAGGGCGAATCA
CCCTCTATGGGTGCTATCTCACGTCTCTTGTCTCCTCCATTCGAGAAATC
TCGGCCTTGCTTAATGCGGTCGACGCGGCGTTCGCAGAGTTGGGAGAGGG
ATTCGGAAAGGCCGTTCTGGGGAAATTCAATCCGTCTCAAGTGGGGGCAA
TCAAAGCCGCAGCCACCAATAAGGGTTTCACGCTCATTAAGGGGCCTCCG
GGAACAGGCAAGACCACCACCCTCAAAGGCCTCCTCAACTCCCTCCACCT
CCGGGAATATCAAAAGTTCTACAAGGGCGTGCTGGCCGTGGCGGGGGCCG
AGGACGCGGACACAGAGCGGGCGTGGAGTAAATATAGGGAGAAGAAACCT
CACATCCTGGTGACAGCGCCTAGTAACACCGCCGTGGATAATATCGTGCT
CCGAATCATGGAGGATGGCTTTGTGGACGGCCAGGGGAATCGATACAACC
CGCCCTTGGTGCGTATGGGCCGGTTTAGCAGCGACAAGGTGCGTGTCGTC
TCTCTCGACCAGCAAGTCGACAGCCTCCTCTCCGAGCCTGACGCCTCGCT
GCGCCAACGCTGCCTGCAGGGGAGGCATCTCTTGGCGTCTCTCAAGCAAG
CACTCGCCCTTGCCCGAATCAAATTTCGAATGCTTTCCCGGGCCATGGAA
GACGGGTGGGGGGGGCGGGAGGGAGGGCGGGAGGGAGGGAGGGTCTTACC
CTTTGGATGGGATGTGCGGGTGGAAGACACGGGAGTGGTGGTCTTCTTCG
CGCCTGAAACTGGACAATCGTCCCTCGAGTTCCCCTCAGTGCCGGTGCTG
GGAGGGAGGGAGGGAGGGGTGGATGAATGCCCAGGACGAAGGCTGGAGCA
GCTTGGGCAGTACCAGGCATTATGCGGGGAAGTGACACGGATCGTGGAGC
AGGTAGAGAACCTGGGCTTGGAGGTAGGGAGGGGGGAGATACGGCTACAG
GGCATGGGGCCGGGCGCGGGACCGGAGAGGCTGCGGGGGGAGTTGGAAAC
GAATTTTTTGGACAGCGCCCACCTGGTGTTTACGACTTTGAACACGGCAG
GTATGCCAAGTGTGTGCTCCGGGAATAAGTTCACCGTGGTCGTGGTGGAT
GAAGCGGCTCAGGCCATCGAGCCCTCGACCTTGATACCGCTCCAGACTGG
CGCGCAGACGTGCGTGTTGGTAGGGGACCCACAGCAACTGCCGGCAACGG
TATTTTCGTCGTTGGGGGCTTCAACGGCTTTTGAAAGGAGTTTGTTCGAG
CGGTTGGAGCATGGTGGGCATCCGGTGCATTTACTGGACACTCAGTACCG
CATGCACCCGCTCATTTCGGCCTTTCCCCGTCTTCATTTTTATGGTGCCT
TGCTGAAAGATGGAGAGAATGTATTTTCCCCCTCCTACACCCGCCCCTGG
CACACCCTCACCCCATTCCAACCCTTTACCTTTCTGAACTTGAGAAGTGA
CACTGATCGAGGAGCAAAGGGAGGAGGAGGAGGAGGAGGAGGGGGCGGAC
TCTCCTCCTCCTACCGCAACACAGCAGAGGCCCGCTTGATCGTGAATGTC
TATCAGACTCTGAAGAGGGAGGGAGGGAGAGAAGTGAAGGGGAAGGTGGG
GGTGATCACGCCATACCAAGCCCAGTTGCTTGAATTAAACAGTCAGTTCG
CGAGGGCGCTGGGTCCGGGGTATTTAGAGGAGGTGGAATTAAACACCGTG
GACGGGTACCAAGGGAAGGAGAAAGACATTATCCTGTTTTCGTGCGTGAG
GGCGGGAGGGAAGAAAGGGATCGGGTTCTTGGCGGATGTGCGACGGATGA
ATGTGGGCCTGACCCGGGGGAGGTTGAACGTGTTGGTGGTGGGGAGGGCG
GAGACGTTGCAGCAGAACAAACATTGGAGGGCCCTGCTGGAGCATGCCAA
GCGAATGGGGGCCTTTGTGAGTATTTCGCACCCCGGGTGTAACCTGCTGG
CGATGGGCAAGGCGGGGGAGAAAGGGAGGGAGGGGGGGAGGGGGCGGGAG
CAGGGGAGAGGAGGAAGTGGAAGAGGGGGAGGAGGAAGAGGGAGAGGATC
AATGTCGGCGCCGCGGAGGGGACAGATGTCTCTTGCTCCTCCTGGTCCTC
CTCCTTCTCCTCTGCCTTCTTCCTCGTCGTTGTCAAGGTTGTACCCTCCC
ACGTCTTCCGGATCGACATCATCGTTACCTCCAGGACACCCACCCGCCGC
CGCCTCCTCCTCCTCCTCCTCATTCCCCTCCTCCGCCTCTACGCCAGGAC
CTCCGCCTGCCTCCCTCCCCCCTCCCTCCCTCACTTTCTCCTCGGCGAGT
GTCAGATCATTCTCTCCTCCTCCTATCGATGACCCTATTCCCTCCCAACC
ATCATCAGCACGAGCCCGTCCTCCTCCGCCTCTTCCTCAGCCTAATCCTC
CCTTCCCTTCCAGAACAGCTATCTCCTACTCCCCCCCTCCCTCCCTCTCC
CCCCCGCTTTCTCCTCCACGCCGTCGTGCTCGAATTCAACACCCGCCATC
AAACCAGCAACAGCACCACTACCAGCAGCAACAGGAACAGCAGCAGCTGC
TAAGAGATCCTCCTCCTCCTCCTAACCCTTACCTGATGATGCTTGGTCAA
ATCCAGCAACAGCAACAGCACCAGCAGCAACAGCAGCAGGAGCAGCAACC
TCGTCCCCATAACCCTCCACGGTAGACAATGAGAGGGAGGGAGGGAAGGA
GTTGGGAGTTTAGACGAATGAATTGCGGCTTTCCAAAATGGAGTAGAGTA
AAATAGAAAAACAATGAATAGAAGAGGGCTTAGGTGTCAAGCCAGGATGG
GAG

protein sequence of NO15G00640.1

>NO15G00640.1-protein ID=NO15G00640.1-protein|Name=NO15G00640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1025bp
MLVGREGGGEGGRRKLRDCYQWDLVLLVRKMEPVWEAVGKARGYRRPLPP
SLPPSSSPEEAEEGEVPPPSSSPAPPLPPSLPLPHAQGVIAIVNPFGRQG
GKIHFRVSSRQYRRLLSSSSSGGSVGGREGGRITLYGCYLTSLVSSIREI
SALLNAVDAAFAELGEGFGKAVLGKFNPSQVGAIKAAATNKGFTLIKGPP
GTGKTTTLKGLLNSLHLREYQKFYKGVLAVAGAEDADTERAWSKYREKKP
HILVTAPSNTAVDNIVLRIMEDGFVDGQGNRYNPPLVRMGRFSSDKVRVV
SLDQQVDSLLSEPDASLRQRCLQGRHLLASLKQALALARIKFRMLSRAME
DGWGGREGGREGGRVLPFGWDVRVEDTGVVVFFAPETGQSSLEFPSVPVL
GGREGGVDECPGRRLEQLGQYQALCGEVTRIVEQVENLGLEVGRGEIRLQ
GMGPGAGPERLRGELETNFLDSAHLVFTTLNTAGMPSVCSGNKFTVVVVD
EAAQAIEPSTLIPLQTGAQTCVLVGDPQQLPATVFSSLGASTAFERSLFE
RLEHGGHPVHLLDTQYRMHPLISAFPRLHFYGALLKDGENVFSPSYTRPW
HTLTPFQPFTFLNLRSDTDRGAKGGGGGGGGGGLSSSYRNTAEARLIVNV
YQTLKREGGREVKGKVGVITPYQAQLLELNSQFARALGPGYLEEVELNTV
DGYQGKEKDIILFSCVRAGGKKGIGFLADVRRMNVGLTRGRLNVLVVGRA
ETLQQNKHWRALLEHAKRMGAFVSISHPGCNLLAMGKAGEKGREGGRGRE
QGRGGSGRGGGGRGRGSMSAPRRGQMSLAPPGPPPSPLPSSSSLSRLYPP
TSSGSTSSLPPGHPPAAASSSSSSFPSSASTPGPPPASLPPPSLTFSSAS
VRSFSPPPIDDPIPSQPSSARARPPPPLPQPNPPFPSRTAISYSPPPSLS
PPLSPPRRRARIQHPPSNQQQHHYQQQQEQQQLLRDPPPPPNPYLMMLGQ
IQQQQQHQQQQQQEQQPRPHNPPR*

mRNA from alignment at chr15:212330..216105-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G00640.1 ID=NO15G00640.1|Name=NO15G00640.1|organism=Nannochloropsis oceanica|type=mRNA|length=3776bp|location=Sequence derived from alignment at chr15:212330..216105- (Nannochloropsis oceanica)
ATGCTGGTGGGGAGGGAGGGAGGAGGGGAGGGAGGGAGGAGGAAGCTGCG
GGACTGTTACCAATGGGATTTGGTTTTGTTGGTCCGAAAGATGGAGCCCG
TGTGGGAGGCGGTGGGAAAAGCGAGGGGTTACAGGCGGCCCCTCCCTCCC
TCCCTCCCTCCCTCCTCTTCCCCTGAAGAAGCAGAAGAAGGCGAAGTCCC
CCCTCCTTCCTCCTCTCCCGCACCTCCCCTCCCTCCCTCCCTCCCTCTTC
CCCATGCCCAAGGCGTCATTGCCATCGTAAACCCCTTCGGCCGCCAAGGA
GGTAAAATCCACTTCCGTGTGTCCTCTCGGCAGTACCGGCGTCTCCTCTC
CTCCTCCTCCAGCGGAGGGAGCGTGGGAGGGAGGGAGGGAGGGCGAATCA
CCCTCTATGGGTGCTATCTCACGTCTCTTGTCTCCTCCATTCGAGAAATC
TCGGCCTTGCTTAATGTAGGCAAGATGCCCCTCCTTCCCCGCCTCCTAAG
TGGAGACCGAGATCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTC
CCTCCGAGGCGGTCGACGCGGCGTTCGCAGAGTTGGGAGAGGGATTCGGA
AAGGCCGTTCTGGGGAAATTCAATCCGTCTCAAGTGGGGGCAATCAAAGC
CGCAGCCACCAATAAGGGTTTCACGCTCATTAAGGGGCCTCCGGGAACAG
GTACCTCCCTCCCTCCCTCCCTCCTTCCCTCCTTCCCTCCTCCGTCAGTC
GATAATCCGGACTCGGTGCCAAAGCAGCAGTTCAACCCTCCCTCCCTCCA
TCCATCCCTTTCCAACCTTCATCCCGTAGGCAAGACCACCACCCTCAAAG
GCCTCCTCAACTCCCTCCACCTCCGGGAATATCAAAAGTTCTACAAGGGC
GTGCTGGCCGTGGCGGGGGCCGAGGACGCGGACACAGAGCGGGCGTGGAG
TAAATATAGGTATGCATCCTAACTATTCGCTCACATACATGTATGGTTTA
TCATTTTTCACTTCCATGCATGTATAGTATATCATTCTTCACTTACGTAC
ATATATCGTATATCTCTCATGGTACGATTTGATTTCAAGATCAAACGAAG
AGGCGGTAACTTTCCCACCTACATTCCTTATGTTAAAAGGAAAAACAAAA
AGCACCTACGCACGCATGCATATGCCCACGCGCATGAAGTTTATGATTAT
GCTGACCTAAATCACACAGGGAGAAGAAACCTCACATCCTGGTGACAGCG
CCTAGTAACACCGCCGTGGATAATATCGTGCTCCGAATCATGGAGGATGG
CTTTGTGGACGGCCAGGGGAATCGATACAACCCGCCCTTGGTGCGTATGG
GCCGGTTTAGCAGCGACAAGGTAAAGTCTGCCCTCCCTCCCTCCTCCCCC
TCCTCCCGCCCTTCTTCCCTCCGCCCTTCACTCACTCCACCCCTCCCTCC
CTCTTGTCCAGGTGCGTGTCGTCTCTCTCGACCAGCAAGTCGACAGCCTC
CTCTCCGAGCCTGACGCCTCGCTGCGCCAACGCTGCCTGCAGGGGAGGCA
TCTCTTGGCGTCTCTCAAGCAAGCACTCGCCCTTGCCCGAATCAAATTTC
GAATGCTTTCCCGGGCCATGGAAGACGGGTGGGGGGGGCGGGAGGGAGGG
CGGGAGGGAGGGAGGGTCTTACCCTTTGGATGGGATGTGCGGGTGGAAGA
CACGGGAGTGGTGGTCTTCTTCGCGCCTGAAACTGGACAATCGTCCCTCG
AGTTCCCCTCAGTGCCGGTGCTGGGAGGGAGGGAGGGAGGGGTGGATGAA
TGCCCAGGACGAAGGCTGGAGCAGCTTGGGCAGTACCAGGCATTATGCGG
GGAAGTGACACGGATCGTGGAGCAGGTAGAGAACCTGGGCTTGGAGGTAG
GGAGGGGGGAGATACGGCTACAGGGCATGGGGCCGGGCGCGGGACCGGAG
AGGCTGCGGGGGGAGTTGGAAACGAATTTTTTGGACAGCGCCCACCTGGT
GTTTACGACTTTGAACACGGCAGGTATGCCAAGTGTGTGCTCCGGGAATA
AGTTCACCGTGGTCGTGGTGGATGAAGCGGCTCAGGCCATCGAGCCCTCG
ACCTTGATACCGCTCCAGACTGGCGCGCAGACGTGCGTGTTGGTAGGGGA
CCCACAGCAACTGCCGGCAACGGTATTTTCGTCGTTGGGGGCTTCAACGG
CTTTTGAAAGGAGTTTGTTCGAGCGGTTGGAGCATGGTGGGCATCCGGTG
CATTTACTGGACACTCAGTACCGCATGCACCCGCTCATTTCGGCCTTTCC
CCGTCTTCATTTTTATGGTGCCTTGCTGAAAGATGGAGAGAATGTATTTT
CCCCCTCCTACACCCGCCCCTGGCACACCCTCACCCCATTCCAACCCTTT
ACCTTTCTGAACTTGAGAAGTGACACTGATCGAGGAGCAAAGGGAGGAGG
AGGAGGAGGAGGAGGGGGCGGACTCTCCTCCTCCTACCGCAACACAGCAG
AGGCCCGCTTGATCGTGAATGTCTATCAGACTCTGAAGAGGGAGGGAGGG
AGAGAAGTGAAGGGGAAGGTGGGGGTGATCACGCCATACCAAGCCCAGTT
GCTTGAATTAAACAGTCAGTTCGCGAGGGCGCTGGGTCCGGGGTATTTAG
AGGAGGTGGAATTAAACACCGTGGACGGGTACCAAGGGAAGGAGAAAGAC
ATTATCCTGTTTTCGTGCGTGAGGGCGGGAGGGAAGAAAGGGATCGGGTT
CTTGGCGGATGTGCGACGGATGAATGTGGGCCTGACCCGGGGGAGGTTGA
ACGTGTTGGTGGTGGGGAGGGCGGAGACGTTGCAGCAGAACAAACATTGG
AGGGCCCTGCTGGAGCATGCCAAGCGAATGGGGGCCTTTGTGAGTATTTC
GCACCCCGGGTGTAACCTGCTGGCGATGGGCAAGGCGGGGGAGAAAGGGA
GGGAGGGGGGGAGGGGGCGGGAGCAGGGGAGAGGAGGAAGTGGAAGAGGG
GGAGGAGGAAGAGGGAGAGGATCAATGTCGGCGCCGCGGAGGGGACAGAT
GTCTCTTGCTCCTCCTGGTCCTCCTCCTTCTCCTCTGCCTTCTTCCTCGT
CGTTGTCAAGGTTGTACCCTCCCACGTCTTCCGGATCGACATCATCGTTA
CCTCCAGGACACCCACCCGCCGCCGCCTCCTCCTCCTCCTCCTCATTCCC
CTCCTCCGCCTCTACGCCAGGACCTCCGCCTGCCTCCCTCCCCCCTCCCT
CCCTCACTTTCTCCTCGGCGAGTGTCAGATCATTCTCTCCTCCTCCTATC
GATGACCCTATTCCCTCCCAACCATCATCAGCACGAGCCCGTCCTCCTCC
GCCTCTTCCTCAGCCTAATCCTCCCTTCCCTTCCAGAACAGCTATCTCCT
ACTCCCCCCCTCCCTCCCTCTCCCCCCCGCTTTCTCCTCCACGCCGTCGT
GCTCGAATTCAACACCCGCCATCAAACCAGCAACAGCACCACTACCAGCA
GCAACAGGAACAGCAGCAGCTGCTAAGAGATCCTCCTCCTCCTCCTAACC
CTTACCTGATGATGCTTGGTCAAATCCAGCAACAGCAACAGCACCAGCAG
CAACAGCAGCAGGAGCAGCAACCTCGTCCCCATAACCCTCCACGGTAGAC
AATGAGAGGGAGGGAGGGAAGGAGTTGGGAGTTTAGACGAATGAATTGCG
GCTTTCCAAAATGGAGTAGAGTAAAATAGAAAAACAATGAATAGAAGAGG
GCTTAGGTGTCAAGCCAGGATGGGAG

Coding sequence (CDS) from alignment at chr15:212330..216105-

>NO15G00640.1 ID=NO15G00640.1|Name=NO15G00640.1|organism=Nannochloropsis oceanica|type=CDS|length=3075bp|location=Sequence derived from alignment at chr15:212330..216105- (Nannochloropsis oceanica)
ATGCTGGTGGGGAGGGAGGGAGGAGGGGAGGGAGGGAGGAGGAAGCTGCG
GGACTGTTACCAATGGGATTTGGTTTTGTTGGTCCGAAAGATGGAGCCCG
TGTGGGAGGCGGTGGGAAAAGCGAGGGGTTACAGGCGGCCCCTCCCTCCC
TCCCTCCCTCCCTCCTCTTCCCCTGAAGAAGCAGAAGAAGGCGAAGTCCC
CCCTCCTTCCTCCTCTCCCGCACCTCCCCTCCCTCCCTCCCTCCCTCTTC
CCCATGCCCAAGGCGTCATTGCCATCGTAAACCCCTTCGGCCGCCAAGGA
GGTAAAATCCACTTCCGTGTGTCCTCTCGGCAGTACCGGCGTCTCCTCTC
CTCCTCCTCCAGCGGAGGGAGCGTGGGAGGGAGGGAGGGAGGGCGAATCA
CCCTCTATGGGTGCTATCTCACGTCTCTTGTCTCCTCCATTCGAGAAATC
TCGGCCTTGCTTAATGCGGTCGACGCGGCGTTCGCAGAGTTGGGAGAGGG
ATTCGGAAAGGCCGTTCTGGGGAAATTCAATCCGTCTCAAGTGGGGGCAA
TCAAAGCCGCAGCCACCAATAAGGGTTTCACGCTCATTAAGGGGCCTCCG
GGAACAGGCAAGACCACCACCCTCAAAGGCCTCCTCAACTCCCTCCACCT
CCGGGAATATCAAAAGTTCTACAAGGGCGTGCTGGCCGTGGCGGGGGCCG
AGGACGCGGACACAGAGCGGGCGTGGAGTAAATATAGGGAGAAGAAACCT
CACATCCTGGTGACAGCGCCTAGTAACACCGCCGTGGATAATATCGTGCT
CCGAATCATGGAGGATGGCTTTGTGGACGGCCAGGGGAATCGATACAACC
CGCCCTTGGTGCGTATGGGCCGGTTTAGCAGCGACAAGGTGCGTGTCGTC
TCTCTCGACCAGCAAGTCGACAGCCTCCTCTCCGAGCCTGACGCCTCGCT
GCGCCAACGCTGCCTGCAGGGGAGGCATCTCTTGGCGTCTCTCAAGCAAG
CACTCGCCCTTGCCCGAATCAAATTTCGAATGCTTTCCCGGGCCATGGAA
GACGGGTGGGGGGGGCGGGAGGGAGGGCGGGAGGGAGGGAGGGTCTTACC
CTTTGGATGGGATGTGCGGGTGGAAGACACGGGAGTGGTGGTCTTCTTCG
CGCCTGAAACTGGACAATCGTCCCTCGAGTTCCCCTCAGTGCCGGTGCTG
GGAGGGAGGGAGGGAGGGGTGGATGAATGCCCAGGACGAAGGCTGGAGCA
GCTTGGGCAGTACCAGGCATTATGCGGGGAAGTGACACGGATCGTGGAGC
AGGTAGAGAACCTGGGCTTGGAGGTAGGGAGGGGGGAGATACGGCTACAG
GGCATGGGGCCGGGCGCGGGACCGGAGAGGCTGCGGGGGGAGTTGGAAAC
GAATTTTTTGGACAGCGCCCACCTGGTGTTTACGACTTTGAACACGGCAG
GTATGCCAAGTGTGTGCTCCGGGAATAAGTTCACCGTGGTCGTGGTGGAT
GAAGCGGCTCAGGCCATCGAGCCCTCGACCTTGATACCGCTCCAGACTGG
CGCGCAGACGTGCGTGTTGGTAGGGGACCCACAGCAACTGCCGGCAACGG
TATTTTCGTCGTTGGGGGCTTCAACGGCTTTTGAAAGGAGTTTGTTCGAG
CGGTTGGAGCATGGTGGGCATCCGGTGCATTTACTGGACACTCAGTACCG
CATGCACCCGCTCATTTCGGCCTTTCCCCGTCTTCATTTTTATGGTGCCT
TGCTGAAAGATGGAGAGAATGTATTTTCCCCCTCCTACACCCGCCCCTGG
CACACCCTCACCCCATTCCAACCCTTTACCTTTCTGAACTTGAGAAGTGA
CACTGATCGAGGAGCAAAGGGAGGAGGAGGAGGAGGAGGAGGGGGCGGAC
TCTCCTCCTCCTACCGCAACACAGCAGAGGCCCGCTTGATCGTGAATGTC
TATCAGACTCTGAAGAGGGAGGGAGGGAGAGAAGTGAAGGGGAAGGTGGG
GGTGATCACGCCATACCAAGCCCAGTTGCTTGAATTAAACAGTCAGTTCG
CGAGGGCGCTGGGTCCGGGGTATTTAGAGGAGGTGGAATTAAACACCGTG
GACGGGTACCAAGGGAAGGAGAAAGACATTATCCTGTTTTCGTGCGTGAG
GGCGGGAGGGAAGAAAGGGATCGGGTTCTTGGCGGATGTGCGACGGATGA
ATGTGGGCCTGACCCGGGGGAGGTTGAACGTGTTGGTGGTGGGGAGGGCG
GAGACGTTGCAGCAGAACAAACATTGGAGGGCCCTGCTGGAGCATGCCAA
GCGAATGGGGGCCTTTGTGAGTATTTCGCACCCCGGGTGTAACCTGCTGG
CGATGGGCAAGGCGGGGGAGAAAGGGAGGGAGGGGGGGAGGGGGCGGGAG
CAGGGGAGAGGAGGAAGTGGAAGAGGGGGAGGAGGAAGAGGGAGAGGATC
AATGTCGGCGCCGCGGAGGGGACAGATGTCTCTTGCTCCTCCTGGTCCTC
CTCCTTCTCCTCTGCCTTCTTCCTCGTCGTTGTCAAGGTTGTACCCTCCC
ACGTCTTCCGGATCGACATCATCGTTACCTCCAGGACACCCACCCGCCGC
CGCCTCCTCCTCCTCCTCCTCATTCCCCTCCTCCGCCTCTACGCCAGGAC
CTCCGCCTGCCTCCCTCCCCCCTCCCTCCCTCACTTTCTCCTCGGCGAGT
GTCAGATCATTCTCTCCTCCTCCTATCGATGACCCTATTCCCTCCCAACC
ATCATCAGCACGAGCCCGTCCTCCTCCGCCTCTTCCTCAGCCTAATCCTC
CCTTCCCTTCCAGAACAGCTATCTCCTACTCCCCCCCTCCCTCCCTCTCC
CCCCCGCTTTCTCCTCCACGCCGTCGTGCTCGAATTCAACACCCGCCATC
AAACCAGCAACAGCACCACTACCAGCAGCAACAGGAACAGCAGCAGCTGC
TAAGAGATCCTCCTCCTCCTCCTAACCCTTACCTGATGATGCTTGGTCAA
ATCCAGCAACAGCAACAGCACCAGCAGCAACAGCAGCAGGAGCAGCAACC
TCGTCCCCATAACCCTCCACGGTAG

Synonyms

Publications