NO15G00390.1, NO15G00390.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G00390.1
Unique NameNO15G00390.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5030
Alignment locationchr15:131035..136162 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:131035..136162 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO15G00390.1 vs.
Match: KKP27045.1 (hypothetical protein UR12_C0034G0004, partial [candidate division TM6 bacterium GW2011_GWF2_30_66])

HSP 1 Score: 74.3 bits (181), Expect = 2.700e-9
Identity = 103/391 (26.34%), Postives = 156/391 (39.90%), Query Frame = 0
Query:  786 ITAATMQTATPNGATGIYIANSTFTFPKMGVSIDASDWVVRDCVFTPNANAPGTTLRALAPYGSTGQSFATGNTFNNPSESSRLIAVFMTAAGPRGASF--TTGWKGNFTLANNAISTSGGAPRAYIDTTGM--YRQPGDQS-----DLGSNGEFSM-----YIQGNDFQVNYTSSPALFYVGYAQAQAFGFFDVLLVKDNVFGARTSGSQKGALYFTSSQAGILGFFAGGFYAGGNSFSTSNIELDSNYVDASFTPNLLVINTNTFTAPSPLITSIYPAAAT---------------------GLLKVDSIQLVAGDRVFAVDNCDAVKNGLYTSEAGAWPRTTDFAVGMDVYASFFQVMNGTEFGGTSWNCTNEAGSAVVGTDALFFSQ 1142
            IT AT   +  +GA     A +  T P + V  D S     D +         T  +   P   T     TGN   N   ++  ++     +GP G S    TG +GN T     ++T GG   AYI T     Y    D +       GS GEFS       + GN     Y ++      G+A + A GF   L    +V G +++         TS+Q       A    A  N+ + + ++ +S     + T N++ +NT+    P+ + T  Y   A                      GL  +D + L  G+RV      D ++NGL+ + AG W R TDFA G +   ++  +++G    GTSW C   A   +VGTD + F Q
Sbjct:  460 ITPATGANSIESGAIAANFATNANT-PNLIVLRDGSGGFSADTI---------TATQFSGPLSGT----VTGNLIGNADTATTSVSF----SGPVGTSGGDITGLQGNLT-----VNTVGGRTAAYIATGAQLAYNSTKDNTFDAIVRRGSAGEFSAGTITANLIGNVTGALYGNADTATTAGHA-SNATGFSGPL--SGDVTGTQSATVVSYVGGKTSTQIAQATDLA--LSATSNNLAETIVKRNSL---GNLTANMITLNTSAILNPNDVTTKSYVDTAVAMGIVPKEPALVVSTISTSTFGLGTIDGVSLSDGNRVLLTGQTDGIENGLWLAHAGDWTRPTDFANGSEAMGAYVLILSGATNAGTSWLCDTPA--TIVGTDDVNFVQ 817          
The following BLAST results are available for this feature:
BLAST of NO15G00390.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
KKP27045.12.700e-926.34hypothetical protein UR12_C0034G0004, partial [can... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G00390NO15G00390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G00390.1NO15G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G00390.1.cds1NO15G00390.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G00390.1.cds2NO15G00390.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G00390.1 ID=NO15G00390.1|Name=NO15G00390.1|organism=Nannochloropsis oceanica|type=mRNA|length=5030bp
AAACACAGACTGGATAAAAAGAGGACTCGAGCATGTCTACCATGAGAGCT
TCATTTGCATTGAGGCGCTGTGCATCGTCGTTGTATTTGTTGCGTCCGCA
TCGCGGTGCCCACCTTTTCCTTCTTCTAGCCCAACTCGTCCTTTACACGC
TTCTACTGGCCGGAACCACTGCGGCAGCCGATTCTTCGTGCGCCTTCAGC
TTGACAGGACAGGTCAGGCAGCCGTACGTGCTGCCAGACAAGCGGTCGAC
AGTCCGCATCGAGGCCATGAACCCATCGTCCAGTACGACAGTAGTTGCAG
TCCAGCTGCGATTGCCCCAAAACACGACGTACAAGACCGGAAACGCCAAA
TCATGGAGGCCTCGTCTGGCTCGCATAGACGGCAGTAGGCGTCCTGTCTA
TGACCCGGACACGCACACGGTGGCGTGGGCCAATATCACGCTGCGGCCGC
GGGGTGTCATCAAGTTGTCTGCCAAGGTTCGGCTTGAGCCTTGTTATCCG
GGCCCGCATCTCAACTTCTCATATGTGGCATTTGCCACGGATGAAGCCGG
CAATACAATATGTTCGCAGGATGGAGTGGCGAGCGTGGCTGTCAAAGACA
AGAAGATGCACTTCGGTCGAGCCATACCTGACTGCGGTCCCATTTCAGAA
GCATGTATACCTGGCCAATTTCGGCCGCCAGCGGGCGGGCCGTGCCAGTT
CTGCACACCTGGAACCTACTGGAACCTGTCCTTTGAGGCCATTGCCTGCC
TCAACTGCCCTTCCGATCAGACATCCCTGCAGGGGGCAGCGCAATGCTTC
ACGCCATGCGCGTCCGGAACGGCCCTCAACACCACGGACTTGAGCTGTGT
CCCAATCCCAGCGAGCGTGTTCGATGATGCTGCGGCTAACAACATCACTA
TCGACGTCAACACCACGGAAGTTTTTGTGGTCAATGATCCTGGGAGTCTA
GAGGACACGATCGGCGCAGCTGCCCTGATGAACGGAACGGTGCTCATCGT
CCTGGCACCTAACCTCTACCCCCAGGTGAACAGTTACGTCCTTACAGCGA
ACCTCATGGTCCTAGCGGGTAGCCCACTGCAGGGCGGTAGACGGCGACTT
ACGCATGCTAGTCATCGGGAGCTGCAGGGTACGGATGATGAGACCGTCAT
TTATGCGACAGGGAGTAATCGGCATTTTGTGATGTCGAACGCAGACATCT
GGCTTAATGGTATCACACTTCAAGGCGCCTCAACTGGTCCCACATCTGGA
GGCGTGGAACTTCAGAACGGGGCCAAGGGGCTGTTTGTTAGCACGAAGTT
CCGCGCCTGTCGCAGCACGGGGGAAGGTGGCAGCCTTAGGCTCATCGGAG
GGTCCTCTTGCTCCGTGGGCACGGGGTCCGTGTTTGTCAGCAATGCTGGT
GCCCAGGGTGGGGCCATCTACGCCGGGGCGGGCTGCTCGGTGACCGTCAA
TAACACGGTTTCATTTACAAACAACTCCGCGCCGCGCACATCGTCTTCGG
CGAGTGGGGGTGGTGCCATCTACCTGGCCAGCACTGCTTCGCTTCTGCTG
GACTATGACGTCGCGTTTACTGGAAACGTAAATGATGATGTGACCATCAC
GGGCGGCTCGGTGTCATGTCTAAACTCGCTGTACTCTACAGGCCTGGTGA
ATTGCACAAGTGGCTGCACGGGCTCCTACAAAATTCCCGCTAGCTGCCCC
GTCTGTTCGATGAGCAGTGGTAGCACCTGCACGAGCTGTCCCCAGGGGAG
CTTCGGGGGAAGCAGTGCAGCGCTGGTGTGCCAGCACTGCCCGTACGGCT
ACACAACCATCTACCCACCCTCGAGCGTATCGCCATTTGACTGTATCCTA
ATTACAGATTCACCCACGCTCTCACCAACATCCCCGGGGGATACCGTCTC
CCCCACATCGAGCCCTACAATAGCGGCGCCCACGGTGGCACCCACGAAGG
CGCCCACCCCCTCCCCGACGACCGAACAGCCGACGGTAAGTCCAACTCCT
GTGGGGTACAAGGCGCCGGCGATGGCCCACTATTACCACGACAGTTGTAT
CGCGACGCCCACCGTACCTTCACCTCCTAGCTTCGCGGACGGCGCTTTGC
TAACGGCCGGGAGCGGCGGCACATATGCACTGCTCTCTCAGGCAATTGAT
GCAGCCTCTGCGGGGGACCGCATCCAGATCCTCCCGGGTATTATCGAAGA
AACAGCCACCGTGACCGTGAGCAAGAGCCTAGAAATCTTCGGGACGGGTC
CCGACTGCATCGTGCAGCGGGATAGCACGACGGCTGTCATCACAATCGCC
GCGGGGACCAACGACGTCTACATTCACACCCTCGGTGTGATCAACAACCA
GGTCCCTAGTACAGACCCGGGTGGCCTTTCCTCCTGCATCACGGCCGCCA
CTATGCAAACGGCCACTCCAAATGGCGCCACTGGCATCTATATTGCCAAC
TCCACCTTCACCTTCCCAAAGATGGGCGTGAGCATTGATGCGTCAGACTG
GGTGGTACGGGATTGTGTCTTCACGCCTAACGCCAACGCGCCGGGCACTA
CTCTCCGCGCCCTGGCTCCCTATGGTAGCACGGGCCAGTCTTTTGCCACG
GGCAACACCTTCAACAACCCTAGTGAGTCCTCCCGCCTTATCGCTGTTTT
TATGACCGCTGCAGGACCTCGGGGGGCGTCCTTCACTACGGGGTGGAAGG
GCAATTTCACACTGGCCAACAACGCCATAAGCACCTCTGGGGGAGCCCCG
CGTGCTTACATTGACACGACTGGCATGTACCGTCAGCCGGGCGATCAAAG
TGATCTTGGTAGCAACGGTGAGTTCTCCATGTACATTCAGGGGAATGACT
TCCAGGTGAACTACACGTCTTCCCCTGCGCTCTTCTACGTGGGCTACGCC
CAGGCGCAGGCCTTCGGTTTCTTTGACGTACTTCTTGTTAAGGATAATGT
CTTTGGGGCGCGTACCAGTGGCTCCCAAAAGGGTGCTTTGTATTTCACTT
CATCACAGGCGGGAATCTTGGGCTTCTTTGCGGGAGGCTTTTACGCCGGG
GGCAACTCTTTTTCCACATCCAATATTGAACTCGATTCTAACTATGTGGA
CGCATCTTTTACACCCAATTTGTTGGTGATAAATACCAACACATTCACGG
CTCCCTCTCCGCTCATCACGTCCATCTATCCGGCGGCTGCAACTGGTCTT
CTCAAGGTAGACAGCATACAACTCGTGGCGGGTGATCGTGTCTTTGCTGT
GGATAATTGCGATGCTGTAAAGAACGGTCTTTATACCTCGGAGGCTGGGG
CATGGCCCCGCACGACCGATTTCGCTGTGGGTATGGACGTCTATGCCTCT
TTCTTTCAGGTCATGAACGGGACGGAGTTCGGCGGAACTAGTTGGAACTG
CACCAACGAGGCCGGCTCCGCCGTGGTGGGCACCGACGCACTGTTCTTCA
GTCAAGCGTAGATTCGTTGTTTCCCAAGCTGCCAGGCTTGGCTGTCAGTC
TGCGTTACAAGTAAATCTATGTGAAAGTAGAACAACGATTATTATGGAAT
GGAGGGGTAGACGAGAGATCAGTAGAAGGGAGGAAAAACAGAGCGAAATT
GGGGGAAATCAAAGTATGTATTGATGAAAGTGGGAGGATTCTGACTTGTT
ATGTGTGTGTGATGGACTGACTGGTAAGGAGGAAGTTTTCTATTCATGAC
CAAGGCCTGCAGCATGATACTGGGCAGGTCGCAAACGTACGATTTCCTAC
CTCTGGCGCCATCGACAGGACCGCCAGAGGAGTCACCTGTCGGCAGCAAT
CGCCAGTTCTTGTCATGCCGCACCCAGAGAAGCAATTGAAGGTAATTTTG
TCGTGTTGAGTTTTAACAATAATAATAATTAGTACTACTATCAACTTTTA
CTTTTACTTATTATTATTATTGGTGTGTCGCACGTCCTCGGGATTGAAAA
GTGGAAAATAAAGAAACGAGTGGGACAGCGTTCCCGATCCAAAATCGCTA
AATTATTTCCTGCAAAATCCTGATATCATATTGACTAGATGAATCGTAAG
GACCTTAGGCTTTAGAACAAGCGCTGGCATGCACAGAAGGCGGATAAGCG
TCCTAATTTGATATGTTTTACTTATCCCTCCTCCTAATCTAAAGCTGAAG
GCAATACAGGGAAACATCACAACCAGCAAGAATAAAGAGAAAGCACCCTT
ATTTCAACGATAGCCGTCACTTGAATCAGGCTGATTAGTCATCGATTGTG
AACATATTCATTGAATGTCAACAATTGCCATCACGATGAGAAGTCATTGA
ATTGAAACCTAAGGCAGGACTTTGATCATCAATTTATTTTCTTAAAGACT
TCTTTAAGATTTCCCATTGTCTCATTCTCCTCCGAATTCCCCCCTTTCTA
ATCGCACATGAGAGAGGACGAAGACAATGACAGAGCCTGACGAGGAGAAC
CCTCCTGCAACACCTCTATCCACTTATTATTACCGTTGTAACAGTACTTT
TTTTACATAACCTTACTCTTTCCTTGTGTTTTACAAAAATGCTGTGTTTT
CTCCCCTTGGGTTTTGCCCCCTTTTCTCTCTCACTCTCCTTTTCTCTCTC
ATTTTCTCTCTCGCTCGATGTTTGTTGCTCTCTCATTTAGTGTATGGAGG
TTTTGAGATGCTGCTACTGTATATAGGTCTGTACACTCTGATATTATCAA
GGGAAGCGAAGCGGAAGGGAACGGAGAGAGGGAACGAGGGAGGGAAGGAG
AGAAGGCTGGCTAAAAATGAGGGCGAAAGACCCCGGGCCGACAAGAAGCA
CGAAGCAACGCTTCTCCTGCTCCTGCTCCTGCTGCTGCCGCTGCTGCTCC
CCACATCAAATGGGCCTTGGGTGCCGATCGAGGCCGGCCTCTCTTCTTAG
GCGGGAGGGAGGAAGGGAAGGAAGGCTCACTGTTCGTATCCTCCTCGCTT
GCTTTAAGGGTCGAAACGTTTTTGGTCGGAGCCCGAGGGAGCGAAGAGGA
GGAGGAGGAGGGGGAGGGATGGAGGGCGGG
back to top

protein sequence of NO15G00390.1

>NO15G00390.1-protein ID=NO15G00390.1-protein|Name=NO15G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1143bp
MSTMRASFALRRCASSLYLLRPHRGAHLFLLLAQLVLYTLLLAGTTAAAD
SSCAFSLTGQVRQPYVLPDKRSTVRIEAMNPSSSTTVVAVQLRLPQNTTY
KTGNAKSWRPRLARIDGSRRPVYDPDTHTVAWANITLRPRGVIKLSAKVR
LEPCYPGPHLNFSYVAFATDEAGNTICSQDGVASVAVKDKKMHFGRAIPD
CGPISEACIPGQFRPPAGGPCQFCTPGTYWNLSFEAIACLNCPSDQTSLQ
GAAQCFTPCASGTALNTTDLSCVPIPASVFDDAAANNITIDVNTTEVFVV
NDPGSLEDTIGAAALMNGTVLIVLAPNLYPQVNSYVLTANLMVLAGSPLQ
GGRRRLTHASHRELQGTDDETVIYATGSNRHFVMSNADIWLNGITLQGAS
TGPTSGGVELQNGAKGLFVSTKFRACRSTGEGGSLRLIGGSSCSVGTGSV
FVSNAGAQGGAIYAGAGCSVTVNNTVSFTNNSAPRTSSSASGGGAIYLAS
TASLLLDYDVAFTGNVNDDVTITGGSVSCLNSLYSTGLVNCTSGCTGSYK
IPASCPVCSMSSGSTCTSCPQGSFGGSSAALVCQHCPYGYTTIYPPSSVS
PFDCILITDSPTLSPTSPGDTVSPTSSPTIAAPTVAPTKAPTPSPTTEQP
TVSPTPVGYKAPAMAHYYHDSCIATPTVPSPPSFADGALLTAGSGGTYAL
LSQAIDAASAGDRIQILPGIIEETATVTVSKSLEIFGTGPDCIVQRDSTT
AVITIAAGTNDVYIHTLGVINNQVPSTDPGGLSSCITAATMQTATPNGAT
GIYIANSTFTFPKMGVSIDASDWVVRDCVFTPNANAPGTTLRALAPYGST
GQSFATGNTFNNPSESSRLIAVFMTAAGPRGASFTTGWKGNFTLANNAIS
TSGGAPRAYIDTTGMYRQPGDQSDLGSNGEFSMYIQGNDFQVNYTSSPAL
FYVGYAQAQAFGFFDVLLVKDNVFGARTSGSQKGALYFTSSQAGILGFFA
GGFYAGGNSFSTSNIELDSNYVDASFTPNLLVINTNTFTAPSPLITSIYP
AAATGLLKVDSIQLVAGDRVFAVDNCDAVKNGLYTSEAGAWPRTTDFAVG
MDVYASFFQVMNGTEFGGTSWNCTNEAGSAVVGTDALFFSQA*
back to top

mRNA from alignment at chr15:131035..136162-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G00390.1 ID=NO15G00390.1|Name=NO15G00390.1|organism=Nannochloropsis oceanica|type=mRNA|length=5128bp|location=Sequence derived from alignment at chr15:131035..136162- (Nannochloropsis oceanica)
AAACACAGACTGGATAAAAAGAGGACTCGAGCATGTCTACCATGAGAGCT TCATTTGCATTGAGGCGCTGTGCATCGTCGTTGTATTTGTTGCGTCCGCA TCGCGGTGCCCACCTTTTCCTTCTTCTAGCCCAACTCGTCCTTTACACGC TTCTACTGGCCGGAACCACTGCGGCAGCCGATTCTTCGTGCGCCTTCAGC TTGACAGGACAGGTCAGGCAGCCGTACGTGCTGCCAGACAAGCGGTCGAC AGTCCGCATCGAGGCCATGAACCCATCGTCCAGTACGACAGTAGTTGCAG TCCAGCTGCGATTGCCCCAAAACACGACGTACAAGACCGGAAACGCCAAA TCATGGAGGCCTCGTCTGGCTCGCATAGACGGCAGTAGGCGTCCTGTCTA TGACCCGGACACGCACACGGTGGCGTGGGCCAATATCACGCTGCGGCCGC GGGGTGTCATCAAGTTGTCTGCCAAGGTTCGGCTTGAGCCTTGTTATCCG GGCCCGCATCTCAACTTCTCATATGTGGCATTTGCCACGGATGAAGCCGG CAATACAATATGTTCGCAGGATGGAGTGGCGAGCGTGGCTGTCAAAGACA AGAAGATGCACTTCGGTCGAGCCATACCTGACTGCGGTCCCATTTCAGAA GCATGTATACCTGGCCAATTTCGGCCGCCAGCGGGCGGGCCGTGCCAGTT CTGCACACCTGGAACCTACTGGAACCTGTCCTTTGAGGCCATTGCCTGCC TCAACTGCCCTTCCGATCAGACATCCCTGCAGGGGGCAGCGCAATGCTTC ACGCCATGCGCGTCCGGAACGGCCCTCAACACCACGGACTTGAGCTGTGT CCCAATCCCAGCGAGCGTGTTCGATGATGCTGCGGCTAACAACATCACTA TCGACGTCAACACCACGGAAGTTTTTGTGGTCAATGATCCTGGGAGTCTA GAGGACACGATCGGCGCAGCTGCCCTGATGAACGGAACGGTGCTCATCGT CCTGGCACCTAACCTCTACCCCCAGGTGAACAGTTACGTCCTTACAGCGA ACCTCATGGTCCTAGCGGGTAGCCCACTGCAGGGCGGTAGACGGCGACTT ACGCATGCTAGTCATCGGGAGCTGCAGGGTACGGATGATGAGACCGTCAT TTATGCGACAGGGAGTAATCGGCATTTTGTGATGTCGAACGCAGACATCT GGCTTAATGGTATCACACTTCAAGGCGCCTCAACTGGTCCCACATCTGGA GGCGTGGAACTTCAGAACGGGGCCAAGGGGCTGTTTGTTAGCACGAAGTT CCGCGCCTGTCGCAGCACGGGGGAAGGTGGCAGCCTTAGGCTCATCGGAG GGTCCTCTTGCTCCGTGGGCACGGGGTCCGTGTTTGTCAGCAATGCTGGT GCCCAGGGTGGGGCCATCTACGCCGGGGCGGGCTGCTCGGTGACCGTCAA TAACACGGTTTCATTTACAAACAACTCCGCGCCGCGCACATCGTCTTCGG CGAGTGGGGGTGGTGCCATCTACCTGGCCAGCACTGCTTCGCTTCTGCTG GACTATGACGTCGCGTTTACTGGAAACGTAAATGATGATGTGACCATCAC GGGCGGCTCGGTGTCATGTCTAAACTCGCTGTACTCTACAGGCCTGGTGA ATTGCACAAGTGGCTGCACGGGCTCCTACAAAATTCCCGCTAGCTGCCCC GTCTGTTCGATGAGCAGTGGTAGCACCTGCACGAGCTGTCCCCAGGGGAG CTTCGGGGGAAGCAGTGCAGCGCTGGTGTGCCAGCACTGCCCGTACGGCT ACACAACCATCTACCCACCCTCGAGCGTATCGCCATTTGACTGTATCCTA ATTACAGATTCACCCACGCTCTCACCAACATCCCCGGGGTATGTATATAG GTTCTTGGTAGTGATGTATCAGACATCCACATTCTTCAGATTTTATAGAC TTCTAACTTATGTCATCACCTTATACAACCATGCAGGGATACCGTCTCCC CCACATCGAGCCCTACAATAGCGGCGCCCACGGTGGCACCCACGAAGGCG CCCACCCCCTCCCCGACGACCGAACAGCCGACGGTAAGTCCAACTCCTGT GGGGTACAAGGCGCCGGCGATGGCCCACTATTACCACGACAGTTGTATCG CGACGCCCACCGTACCTTCACCTCCTAGCTTCGCGGACGGCGCTTTGCTA ACGGCCGGGAGCGGCGGCACATATGCACTGCTCTCTCAGGCAATTGATGC AGCCTCTGCGGGGGACCGCATCCAGATCCTCCCGGGTATTATCGAAGAAA CAGCCACCGTGACCGTGAGCAAGAGCCTAGAAATCTTCGGGACGGGTCCC GACTGCATCGTGCAGCGGGATAGCACGACGGCTGTCATCACAATCGCCGC GGGGACCAACGACGTCTACATTCACACCCTCGGTGTGATCAACAACCAGG TCCCTAGTACAGACCCGGGTGGCCTTTCCTCCTGCATCACGGCCGCCACT ATGCAAACGGCCACTCCAAATGGCGCCACTGGCATCTATATTGCCAACTC CACCTTCACCTTCCCAAAGATGGGCGTGAGCATTGATGCGTCAGACTGGG TGGTACGGGATTGTGTCTTCACGCCTAACGCCAACGCGCCGGGCACTACT CTCCGCGCCCTGGCTCCCTATGGTAGCACGGGCCAGTCTTTTGCCACGGG CAACACCTTCAACAACCCTAGTGAGTCCTCCCGCCTTATCGCTGTTTTTA TGACCGCTGCAGGACCTCGGGGGGCGTCCTTCACTACGGGGTGGAAGGGC AATTTCACACTGGCCAACAACGCCATAAGCACCTCTGGGGGAGCCCCGCG TGCTTACATTGACACGACTGGCATGTACCGTCAGCCGGGCGATCAAAGTG ATCTTGGTAGCAACGGTGAGTTCTCCATGTACATTCAGGGGAATGACTTC CAGGTGAACTACACGTCTTCCCCTGCGCTCTTCTACGTGGGCTACGCCCA GGCGCAGGCCTTCGGTTTCTTTGACGTACTTCTTGTTAAGGATAATGTCT TTGGGGCGCGTACCAGTGGCTCCCAAAAGGGTGCTTTGTATTTCACTTCA TCACAGGCGGGAATCTTGGGCTTCTTTGCGGGAGGCTTTTACGCCGGGGG CAACTCTTTTTCCACATCCAATATTGAACTCGATTCTAACTATGTGGACG CATCTTTTACACCCAATTTGTTGGTGATAAATACCAACACATTCACGGCT CCCTCTCCGCTCATCACGTCCATCTATCCGGCGGCTGCAACTGGTCTTCT CAAGGTAGACAGCATACAACTCGTGGCGGGTGATCGTGTCTTTGCTGTGG ATAATTGCGATGCTGTAAAGAACGGTCTTTATACCTCGGAGGCTGGGGCA TGGCCCCGCACGACCGATTTCGCTGTGGGTATGGACGTCTATGCCTCTTT CTTTCAGGTCATGAACGGGACGGAGTTCGGCGGAACTAGTTGGAACTGCA CCAACGAGGCCGGCTCCGCCGTGGTGGGCACCGACGCACTGTTCTTCAGT CAAGCGTAGATTCGTTGTTTCCCAAGCTGCCAGGCTTGGCTGTCAGTCTG CGTTACAAGTAAATCTATGTGAAAGTAGAACAACGATTATTATGGAATGG AGGGGTAGACGAGAGATCAGTAGAAGGGAGGAAAAACAGAGCGAAATTGG GGGAAATCAAAGTATGTATTGATGAAAGTGGGAGGATTCTGACTTGTTAT GTGTGTGTGATGGACTGACTGGTAAGGAGGAAGTTTTCTATTCATGACCA AGGCCTGCAGCATGATACTGGGCAGGTCGCAAACGTACGATTTCCTACCT CTGGCGCCATCGACAGGACCGCCAGAGGAGTCACCTGTCGGCAGCAATCG CCAGTTCTTGTCATGCCGCACCCAGAGAAGCAATTGAAGGTAATTTTGTC GTGTTGAGTTTTAACAATAATAATAATTAGTACTACTATCAACTTTTACT TTTACTTATTATTATTATTGGTGTGTCGCACGTCCTCGGGATTGAAAAGT GGAAAATAAAGAAACGAGTGGGACAGCGTTCCCGATCCAAAATCGCTAAA TTATTTCCTGCAAAATCCTGATATCATATTGACTAGATGAATCGTAAGGA CCTTAGGCTTTAGAACAAGCGCTGGCATGCACAGAAGGCGGATAAGCGTC CTAATTTGATATGTTTTACTTATCCCTCCTCCTAATCTAAAGCTGAAGGC AATACAGGGAAACATCACAACCAGCAAGAATAAAGAGAAAGCACCCTTAT TTCAACGATAGCCGTCACTTGAATCAGGCTGATTAGTCATCGATTGTGAA CATATTCATTGAATGTCAACAATTGCCATCACGATGAGAAGTCATTGAAT TGAAACCTAAGGCAGGACTTTGATCATCAATTTATTTTCTTAAAGACTTC TTTAAGATTTCCCATTGTCTCATTCTCCTCCGAATTCCCCCCTTTCTAAT CGCACATGAGAGAGGACGAAGACAATGACAGAGCCTGACGAGGAGAACCC TCCTGCAACACCTCTATCCACTTATTATTACCGTTGTAACAGTACTTTTT TTACATAACCTTACTCTTTCCTTGTGTTTTACAAAAATGCTGTGTTTTCT CCCCTTGGGTTTTGCCCCCTTTTCTCTCTCACTCTCCTTTTCTCTCTCAT TTTCTCTCTCGCTCGATGTTTGTTGCTCTCTCATTTAGTGTATGGAGGTT TTGAGATGCTGCTACTGTATATAGGTCTGTACACTCTGATATTATCAAGG GAAGCGAAGCGGAAGGGAACGGAGAGAGGGAACGAGGGAGGGAAGGAGAG AAGGCTGGCTAAAAATGAGGGCGAAAGACCCCGGGCCGACAAGAAGCACG AAGCAACGCTTCTCCTGCTCCTGCTCCTGCTGCTGCCGCTGCTGCTCCCC ACATCAAATGGGCCTTGGGTGCCGATCGAGGCCGGCCTCTCTTCTTAGGC GGGAGGGAGGAAGGGAAGGAAGGCTCACTGTTCGTATCCTCCTCGCTTGC TTTAAGGGTCGAAACGTTTTTGGTCGGAGCCCGAGGGAGCGAAGAGGAGG AGGAGGAGGGGGAGGGATGGAGGGCGGG
back to top

Coding sequence (CDS) from alignment at chr15:131035..136162-

>NO15G00390.1 ID=NO15G00390.1|Name=NO15G00390.1|organism=Nannochloropsis oceanica|type=CDS|length=3429bp|location=Sequence derived from alignment at chr15:131035..136162- (Nannochloropsis oceanica)
ATGTCTACCATGAGAGCTTCATTTGCATTGAGGCGCTGTGCATCGTCGTT
GTATTTGTTGCGTCCGCATCGCGGTGCCCACCTTTTCCTTCTTCTAGCCC
AACTCGTCCTTTACACGCTTCTACTGGCCGGAACCACTGCGGCAGCCGAT
TCTTCGTGCGCCTTCAGCTTGACAGGACAGGTCAGGCAGCCGTACGTGCT
GCCAGACAAGCGGTCGACAGTCCGCATCGAGGCCATGAACCCATCGTCCA
GTACGACAGTAGTTGCAGTCCAGCTGCGATTGCCCCAAAACACGACGTAC
AAGACCGGAAACGCCAAATCATGGAGGCCTCGTCTGGCTCGCATAGACGG
CAGTAGGCGTCCTGTCTATGACCCGGACACGCACACGGTGGCGTGGGCCA
ATATCACGCTGCGGCCGCGGGGTGTCATCAAGTTGTCTGCCAAGGTTCGG
CTTGAGCCTTGTTATCCGGGCCCGCATCTCAACTTCTCATATGTGGCATT
TGCCACGGATGAAGCCGGCAATACAATATGTTCGCAGGATGGAGTGGCGA
GCGTGGCTGTCAAAGACAAGAAGATGCACTTCGGTCGAGCCATACCTGAC
TGCGGTCCCATTTCAGAAGCATGTATACCTGGCCAATTTCGGCCGCCAGC
GGGCGGGCCGTGCCAGTTCTGCACACCTGGAACCTACTGGAACCTGTCCT
TTGAGGCCATTGCCTGCCTCAACTGCCCTTCCGATCAGACATCCCTGCAG
GGGGCAGCGCAATGCTTCACGCCATGCGCGTCCGGAACGGCCCTCAACAC
CACGGACTTGAGCTGTGTCCCAATCCCAGCGAGCGTGTTCGATGATGCTG
CGGCTAACAACATCACTATCGACGTCAACACCACGGAAGTTTTTGTGGTC
AATGATCCTGGGAGTCTAGAGGACACGATCGGCGCAGCTGCCCTGATGAA
CGGAACGGTGCTCATCGTCCTGGCACCTAACCTCTACCCCCAGGTGAACA
GTTACGTCCTTACAGCGAACCTCATGGTCCTAGCGGGTAGCCCACTGCAG
GGCGGTAGACGGCGACTTACGCATGCTAGTCATCGGGAGCTGCAGGGTAC
GGATGATGAGACCGTCATTTATGCGACAGGGAGTAATCGGCATTTTGTGA
TGTCGAACGCAGACATCTGGCTTAATGGTATCACACTTCAAGGCGCCTCA
ACTGGTCCCACATCTGGAGGCGTGGAACTTCAGAACGGGGCCAAGGGGCT
GTTTGTTAGCACGAAGTTCCGCGCCTGTCGCAGCACGGGGGAAGGTGGCA
GCCTTAGGCTCATCGGAGGGTCCTCTTGCTCCGTGGGCACGGGGTCCGTG
TTTGTCAGCAATGCTGGTGCCCAGGGTGGGGCCATCTACGCCGGGGCGGG
CTGCTCGGTGACCGTCAATAACACGGTTTCATTTACAAACAACTCCGCGC
CGCGCACATCGTCTTCGGCGAGTGGGGGTGGTGCCATCTACCTGGCCAGC
ACTGCTTCGCTTCTGCTGGACTATGACGTCGCGTTTACTGGAAACGTAAA
TGATGATGTGACCATCACGGGCGGCTCGGTGTCATGTCTAAACTCGCTGT
ACTCTACAGGCCTGGTGAATTGCACAAGTGGCTGCACGGGCTCCTACAAA
ATTCCCGCTAGCTGCCCCGTCTGTTCGATGAGCAGTGGTAGCACCTGCAC
GAGCTGTCCCCAGGGGAGCTTCGGGGGAAGCAGTGCAGCGCTGGTGTGCC
AGCACTGCCCGTACGGCTACACAACCATCTACCCACCCTCGAGCGTATCG
CCATTTGACTGTATCCTAATTACAGATTCACCCACGCTCTCACCAACATC
CCCGGGGGATACCGTCTCCCCCACATCGAGCCCTACAATAGCGGCGCCCA
CGGTGGCACCCACGAAGGCGCCCACCCCCTCCCCGACGACCGAACAGCCG
ACGGTAAGTCCAACTCCTGTGGGGTACAAGGCGCCGGCGATGGCCCACTA
TTACCACGACAGTTGTATCGCGACGCCCACCGTACCTTCACCTCCTAGCT
TCGCGGACGGCGCTTTGCTAACGGCCGGGAGCGGCGGCACATATGCACTG
CTCTCTCAGGCAATTGATGCAGCCTCTGCGGGGGACCGCATCCAGATCCT
CCCGGGTATTATCGAAGAAACAGCCACCGTGACCGTGAGCAAGAGCCTAG
AAATCTTCGGGACGGGTCCCGACTGCATCGTGCAGCGGGATAGCACGACG
GCTGTCATCACAATCGCCGCGGGGACCAACGACGTCTACATTCACACCCT
CGGTGTGATCAACAACCAGGTCCCTAGTACAGACCCGGGTGGCCTTTCCT
CCTGCATCACGGCCGCCACTATGCAAACGGCCACTCCAAATGGCGCCACT
GGCATCTATATTGCCAACTCCACCTTCACCTTCCCAAAGATGGGCGTGAG
CATTGATGCGTCAGACTGGGTGGTACGGGATTGTGTCTTCACGCCTAACG
CCAACGCGCCGGGCACTACTCTCCGCGCCCTGGCTCCCTATGGTAGCACG
GGCCAGTCTTTTGCCACGGGCAACACCTTCAACAACCCTAGTGAGTCCTC
CCGCCTTATCGCTGTTTTTATGACCGCTGCAGGACCTCGGGGGGCGTCCT
TCACTACGGGGTGGAAGGGCAATTTCACACTGGCCAACAACGCCATAAGC
ACCTCTGGGGGAGCCCCGCGTGCTTACATTGACACGACTGGCATGTACCG
TCAGCCGGGCGATCAAAGTGATCTTGGTAGCAACGGTGAGTTCTCCATGT
ACATTCAGGGGAATGACTTCCAGGTGAACTACACGTCTTCCCCTGCGCTC
TTCTACGTGGGCTACGCCCAGGCGCAGGCCTTCGGTTTCTTTGACGTACT
TCTTGTTAAGGATAATGTCTTTGGGGCGCGTACCAGTGGCTCCCAAAAGG
GTGCTTTGTATTTCACTTCATCACAGGCGGGAATCTTGGGCTTCTTTGCG
GGAGGCTTTTACGCCGGGGGCAACTCTTTTTCCACATCCAATATTGAACT
CGATTCTAACTATGTGGACGCATCTTTTACACCCAATTTGTTGGTGATAA
ATACCAACACATTCACGGCTCCCTCTCCGCTCATCACGTCCATCTATCCG
GCGGCTGCAACTGGTCTTCTCAAGGTAGACAGCATACAACTCGTGGCGGG
TGATCGTGTCTTTGCTGTGGATAATTGCGATGCTGTAAAGAACGGTCTTT
ATACCTCGGAGGCTGGGGCATGGCCCCGCACGACCGATTTCGCTGTGGGT
ATGGACGTCTATGCCTCTTTCTTTCAGGTCATGAACGGGACGGAGTTCGG
CGGAACTAGTTGGAACTGCACCAACGAGGCCGGCTCCGCCGTGGTGGGCA
CCGACGCACTGTTCTTCAGTCAAGCGTAG
back to top
Synonyms
Publications