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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr15 | genome | chr15:20798..25268 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO15G00100.1 vs.
Match: APF45980.1 (plastid glutamate 1-semialdehyde 2,1-aminotransferase, partial [Strombomonas acuminata]) HSP 1 Score: 724.9 bits (1870), Expect = 1.500e-205 Identity = 360/433 (83.14%), Postives = 389/433 (89.84%), Query Frame = 0
Query: 31 MMAATMAPFKTDKSSAVFEEAKGIMPGGVSSPVRAFKSVGGNPIVFDKVKGAYAWDVDGNKYIDYVGSWGPAIVGHADDEVLKVLGEVMAKGTSFGAPSSYENVLAKMVIEAVPSVEMVRFTNSGTEACMGMLRLVRAFTKREKVIKFDGCYHGHADGFLVQAGSGVATLGLPDSPGVPQGSTAGTLVAEYNNLANVEQLLKEHEVAAVILEPVVGNSGFIAPDKSFLEGLRKLTKEHGALLVFDEVMTGFRISYGGAQEYFGVTPDITTMGKVIGGGLPVGAYGGRKDIMSMVAPAGPMYQAGTLSGNPLAMTAGIKTLEILKRPGSYEKLDKLTARLIDGILKEGAAAGHAVCGGHISGMFGFFFTEGPVRCFSDAAKSDTAKFAKWHRGMLERGVYLAPSQYEAGFMSLAHTEADIDATIAAAREVFKTL 464
M A T + F T+KS+A+FEEAK IMPGGVSSPVRAFKSVGGNPIVFD+VKGAY WDVD N+YIDYVGSWGPAIVGHA+DEVL L E + KGTSFGAPS+ ENVLAKMVIEAVPSVEMVRFTNSGTEACMGMLR+VRAFT REKVIKF+GCYHGHADGFLVQAGSGVATLGLPDSPGVP G+TAGTLVA+YN+LA+VE LLK ++VAAVILEPVVGNSGFIAP K FL GLR+LT ++GALLVFDEVMTGFRI+YG AQ YFGV PD+TTMGKVIGGGLPVGAYGGRKDIMS+VAPAGPMYQAGTLSGNPLAM AGIKT+EILKRPGSYE LD++T +LIDGIL G AGHAVCGGHISGMFGFFF EGPV + DA KSDT KFAKWHR MLERGVYLAPSQ+EAGF SLAHTEADID TIA AREV K L
Sbjct: 137 MAAMTASKFNTEKSNAIFEEAKTIMPGGVSSPVRAFKSVGGNPIVFDRVKGAYCWDVDNNEYIDYVGSWGPAIVGHANDEVLDSLRETLKKGTSFGAPSALENVLAKMVIEAVPSVEMVRFTNSGTEACMGMLRMVRAFTNREKVIKFEGCYHGHADGFLVQAGSGVATLGLPDSPGVPAGATAGTLVAQYNDLASVEALLKGNDVAAVILEPVVGNSGFIAPTKEFLVGLRELTTKYGALLVFDEVMTGFRIAYGCAQSYFGVIPDVTTMGKVIGGGLPVGAYGGRKDIMSVVAPAGPMYQAGTLSGNPLAMAAGIKTMEILKRPGSYEYLDRITKKLIDGILAAGKEAGHAVCGGHISGMFGFFFCEGPVMNYKDATKSDTKKFAKWHRMMLERGVYLAPSQFEAGFTSLAHTEADIDRTIAIAREVMKEL 569
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO15G00100.1 ID=NO15G00100.1|Name=NO15G00100.1|organism=Nannochloropsis oceanica|type=mRNA|length=2095bp GTATCTTCACCAGCGGACGCAGTGGTGCAGCAGCAGCAGCAACATAACTA TTCCTGTTCATGCAGTTCCTGGACGCTATTGGCCGTAAGACCGACGTTGT TTGTGTATCTACGTCGTCTTGTTTTTATTGCGTCTGTTTTCCACCCTCTC CGACCTCCCCCCCATCTTCCGTCTCCCACCGCACAACAGGCTCCTGCTTG CTGAGTTGCAGTGCATCCCACATGTCCCTGGCCAGGGCAGCGACTCACAC CTCTCATTCCTGTCTTTGAGGATGAAGCAGGACTAACGCACGTCCTTTCG ACTTATTATATAGATGCCTTGTCGCTCTCACCCTTCGATGCAGGGCCCGT CCTTGTGTCCTGCGTGCTTGCTGATATGATAGTGCTGCTGCAACGTGCTG TCTCAGAACATTTCCACAGGACATATCTCTGACCCCACGCCCATCCCTCT TTCTCTTCCCCGCAACTCCTTCACAGAGTCAGAGAAGATGATGAAGCACG TCACAATCACGGCCCTCCTCTTGCCGACGCTGGCCACGGCCTTCCTGGCA CCCATCCCTGCCAAGCAACAAGTCCGCATGATGGCTGCGACCATGGCCCC GTTCAAGACCGACAAGTCCTCGGCCGTGTTTGAGGAGGCCAAGGGCATTA TGCCCGGCGGCGTCTCTTCGCCCGTGCGTGCCTTCAAGTCTGTGGGCGGC AACCCCATTGTCTTCGATAAGGTGAAGGGCGCCTACGCCTGGGACGTGGA TGGGAACAAGTACATCGACTACGTCGGCTCCTGGGGCCCGGCCATCGTGG GCCACGCGGATGACGAGGTCCTCAAGGTCTTGGGCGAGGTCATGGCCAAG GGCACCAGCTTCGGCGCCCCCTCCTCCTACGAAAATGTGCTTGCCAAGAT GGTCATCGAGGCCGTTCCGTCGGTGGAGATGGTGCGCTTCACCAACAGCG GCACAGAGGCCTGTATGGGCATGCTCCGCCTCGTCCGCGCCTTCACCAAG AGGGAGAAGGTGATCAAGTTCGACGGCTGCTATCACGGCCACGCCGACGG TTTCCTGGTCCAAGCCGGCTCGGGGGTGGCGACTTTGGGACTGCCCGACT CCCCCGGCGTGCCGCAGGGCTCTACCGCCGGCACTCTGGTGGCGGAGTAC AACAATCTGGCCAACGTCGAGCAGCTCCTCAAGGAGCACGAGGTAGCGGC CGTGATTCTGGAGCCGGTGGTGGGCAACAGCGGCTTCATCGCCCCCGACA AGTCCTTTTTGGAGGGCCTCCGCAAGCTGACCAAGGAGCACGGAGCCCTC CTCGTCTTCGATGAGGTCATGACCGGCTTCCGCATCTCTTATGGCGGGGC GCAGGAGTACTTCGGCGTCACCCCGGACATCACCACTATGGGCAAGGTAA TCGGCGGCGGTCTCCCCGTGGGAGCTTACGGCGGCCGCAAGGATATCATG TCCATGGTCGCCCCCGCCGGGCCCATGTATCAGGCTGGCACCCTTTCGGG GAACCCCCTGGCCATGACGGCCGGAATTAAGACTTTGGAGATTTTGAAGC GCCCGGGCTCGTACGAGAAGCTCGACAAGCTCACCGCCCGCCTCATTGAT GGTATCCTGAAGGAGGGCGCGGCGGCGGGCCACGCGGTGTGCGGTGGGCA CATCAGCGGCATGTTCGGCTTCTTCTTCACCGAGGGCCCCGTCCGATGCT TCAGTGACGCCGCCAAGAGCGACACGGCCAAGTTCGCTAAGTGGCATCGC GGCATGCTCGAGCGCGGCGTCTACCTGGCCCCCTCGCAGTATGAAGCAGG CTTCATGTCCCTAGCTCACACGGAGGCCGACATCGATGCCACCATCGCAG CGGCCAGGGAGGTGTTCAAGACGCTTTAAATGAAGAGAGAGAAGGCAAAG AGTTATTGTAGGGCAAGGAAAAGAGGAAAAGCAGGGCAGTTTTGAGAGTA AGGAAATGTTTATCTTCTTCTGGTGGTGCGAGAGGGGGGGGGAGGGAGTG CATAAGGGAGGGAAGAAAGGATCACTATACTACAATGGCGTAAAACCGCA CGCGCATACCAAAGAAAAGAAAGAAAGGAATGGAAGAAAGTTACA back to topprotein sequence of NO15G00100.1 >NO15G00100.1-protein ID=NO15G00100.1-protein|Name=NO15G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=464bp MMKHVTITALLLPTLATAFLAPIPAKQQVRMMAATMAPFKTDKSSAVFEE AKGIMPGGVSSPVRAFKSVGGNPIVFDKVKGAYAWDVDGNKYIDYVGSWG PAIVGHADDEVLKVLGEVMAKGTSFGAPSSYENVLAKMVIEAVPSVEMVR FTNSGTEACMGMLRLVRAFTKREKVIKFDGCYHGHADGFLVQAGSGVATL GLPDSPGVPQGSTAGTLVAEYNNLANVEQLLKEHEVAAVILEPVVGNSGF IAPDKSFLEGLRKLTKEHGALLVFDEVMTGFRISYGGAQEYFGVTPDITT MGKVIGGGLPVGAYGGRKDIMSMVAPAGPMYQAGTLSGNPLAMTAGIKTL EILKRPGSYEKLDKLTARLIDGILKEGAAAGHAVCGGHISGMFGFFFTEG PVRCFSDAAKSDTAKFAKWHRGMLERGVYLAPSQYEAGFMSLAHTEADID ATIAAAREVFKTL* back to topmRNA from alignment at chr15:20798..25268+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO15G00100.1 ID=NO15G00100.1|Name=NO15G00100.1|organism=Nannochloropsis oceanica|type=mRNA|length=4471bp|location=Sequence derived from alignment at chr15:20798..25268+ (Nannochloropsis oceanica) GTATCTTCACCAGCGGACGCAGTGGTGCAGCAGCAGCAGCAACATAACTA
TTCCTGTTCATGCAGTTCCTGGACGCTATTGGCCGTAAGACCGACGTTGT
TTGTGTATCTACGTCGTCTTGTTTTTATTGCGTCTGTTTTCCACCCTCTC
CGACCTCCCCCCCATCTTCCGTCTCCCACCGCACAACAGGCTCCTGCTTG
CTGAGTTGCAGTGCATCCCACATGTCCCTGGCCAGGGCAGCGACTCACAC
CTCTCATTCCTGTCTTTGAGGATGAAGCAGGACTAACGCACGTCCTTTCG
ACTTATTATATAGATGCCTTGTCGCTCTCACCCTTCGATGCAGGGCCCGT
CCTTGTGTCCTGCGTGCTTGCTGATATGATAGTGCTGCTGCAACGTGCTG
TCTCAGAACATTTCCACAGGACATATCTCTGACCCCACGCCCATCCCTCT
TTCTCTTCCCCGCAACTCCTTCACAGAGTCAGAGAAGATGATGAAGCACG
TCACAATCACGGCCCTCCTCTTGCCGACGCTGGCCACGGCCTTCCTGGCA
CCCATCCCTGCCAAGCAACAAGGTGTGTAGGGGAATGAGGAAGAGAGAGA
TGGAGAAGTTGAATTGTAATGCGATGGATATCCAGGGATACAGTACTCAC
CGATTGTCCCTCTCCCCTCCCACCCGTCCTTCCTTCGCAGTCCGCATGAT
GGCTGCGACCATGGCCCCGTTCAAGACCGACAAGTCCTCGGCCGTGTTTG
AGGAGGCCAAGGTGAGGAGAAGCGCAGGGTGGAACAGTGCCAGGAAGGGA
GAAAGGGAGAAAGGACGAGACGTGGTTGGGGAGAGAGAGAGGGGGGAAAG
GAATGTTGGTTTGACTCCTTATATCTGCGCCGACGGATACTCATTACCCT
GCGTGCCGGCCTACCCGTCCGTCTCAGACAAAACGAGCACTTAAACTTCC
TCCTCCCCCTCCTCCCTCCCTCCCTCCCTACCTAGGGCATTATGCCCGGC
GGCGTCTCTTCGCCCGTGCGTGCCTTCAAGTCTGTGGGCGGCAACCCCAT
TGTCTTCGATAAGGTACGGAGGGAGGGAAAGAGGGAGGGAGGGCGGGCGG
GCGGATATGAATAAGACAGTGTACGTACTTCTCACGAATACATTTAAATA
ACAAGAAAGAATACTCATAACTCTCTACCCCCTCTCCTTTCCTCCTTCCC
TCCCTCCTTCCCTCCCACCCTTCCTGGTGTCCAGGTGAAGGGCGCCTACG
CCTGGGACGTGGATGGGAACAAGTACATCGACTACGTCGGCTCCTGGGTA
CGTAATACATCAAGCTCGTCCGCCCTCCCCCCTCTCTCCTTTCCTCGACT
CGTTCTCTCCTCTCTCTCTCTTTCCGTCCTCCCTCTCCGTCCCGTCACTC
CCTTGCCTCTCCATCCCTCCCTTCCTCGACCTCCCCCCGCTGGAATCGGG
CGCCAACCGCCCCCTCCTCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCCCCCTCCCACACATAGGGCCCGGCCATCGTGGGCCACGCGGATG
ACGAGGTCCTCAAGGTCTTGGGCGAGGTCATGGCCAAGGGCACCAGCTTC
GGCGCCCCCTCCTCCTACGAAAATGTGCTTGCCAAGATGGTATGTCTCCC
CCCTCCCTCCCTTCGTCCCTCCCTCCCTCCTTGGATGCATCACCAGTGGC
TTGGAGTCCTGCACTTTTTTACTTCCCTTCCCCCTTCGCCGCCTCCCTCC
CTCCCTCCTTCATTCCTCATCTCCCTCCCCTCCCCCCCTCCCCTTCCTCC
CCCCCTTGTCCAGGTCATCGAGGCCGTTCCGTCGGTGGAGATGGTGCGCT
TCACCAACAGCGGCACAGAGGCCTGTATGGGCATGCTCCGCCTCGTCCGC
GCCTTCACCAAGAGGGAGAAGGTAGGGGGGGAGGGAGGGGGGGAGGGAAG
GATGGACGGCGGTGGCTTGGCTGATGTCGTGAGTAAGAGATACCGATTCT
CATGGCACTACACCCTCCCTACCTCCTCCTCCTCTCCCCCTCCCTCCGCC
CCAAAGGTGATCAAGTTCGACGGCTGCTATCACGGCCACGCCGACGGTTT
CCTGGTCCAAGCCGGCTCGGGGGTGGCGACTTTGGGACTGCCCGACTCCC
CCGGCGTGCCGCAGGTGAGGGGGAGGGAGGGAGGGGCGAAGGGAGGGGCG
GAGGGAGGGACGGGGATGACATTCCTGTATTCTCAACGTTGTCAATCGAG
TTGTTTTGATTTTTGGTTTGTCCCTCCCTCCCTCCCTTCCTCCCTCCCCC
TTTCCTCAGGGCTCTACCGCCGGCACTCTGGTGGCGGAGTACAACAATCT
GGCCAACGTCGAGCAGCTCCTCAAGGTACGCGTCCTCCTCTCCCTCCCTC
CCTCCCCCCCTCCCTCTTTTCCTCCCTGTTCTTCCTCGCTCCTCTCTCCC
TCCTGTCATCATCCGTCGCACACGCCTCCCTCCCTCCCTCCCTCCCTACC
TCTTGTATCGGTCAAGCACACATCCCGCCACCACTCGTCATTCATATGAT
CCTCACACTCCCCTTCCTTCCTCCTTCACACCTCCCTCCCTCCCTCCCTC
TTTCCCTCCCAGGAGCACGAGGTAGCGGCCGTGATTCTGGAGCCGGTGGT
GGGCAACAGCGGCTTCATCGCCCCCGACAAGTCCTTTTTGGAGGGTGAGG
CAGGGAGGGAGGGAGGGAGGGAGCGAGGGAGGGAGGGAAGGATCAAGGGA
GGGAGGGAGAAATGGAGGGAAAGCCCAAGGCTGACGGGCAAGGTATGTGA
AGGCCCGGAAGGATGCAGGTCGTGTACATCTACGCGTGTGCCTCCTTCTC
ACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCAGGCCTCCGCAAGCTGACC
AAGGAGCACGGAGCCCTCCTCGTCTTCGATGAGGTCATGACCGGCTTCCG
CATCTCTTATGGCGGGGCGCAGGTACGGGGAAAGGGAGGGAGGGAGAGGG
GGAGAGAGGGAGGAAGGGAGGAAGGAGGGAGGGAGGGCTCTGCCTGGAGG
CACAAAATCAGCACTTCTTCCCGCCTGCTTCTCACCCCCCTCCCTCCCGC
CCTCCCTCCCGCCCTCCCTCCCGCCCTCCCTCAGGAGTACTTCGGCGTCA
CCCCGGACATCACCACTATGGGCAAGGTAATCGGCGGCGGTCTCCCCGTG
GGAGCTTACGGCGGCCGCAAGGATATCATGTCCATGGTCGCCCCCGCCGG
GCCCATGTATCAGGCACGTTCTCCCCTCCCCTCCCTCCTTCCCTTCCGCC
CCCTCTCCCTCCCTCCCATTCTTAATCCTCTCCCTCCTTCGTCCTTACAG
CGACCCTACCCTCCATCCCTTCCCTCCTTCCCTTCCTCCCTCCCTCCCTC
CCTCGAATCAGGCTGGCACCCTTTCGGGGAACCCCCTGGCCATGACGGCC
GGAATTAAGACTTTGGAGATTTTGAAGCGCCCGGGCTCGTACGAGAAGCT
CGACAAGCTCACCGCCCGCCTCATTGATGGGTAGGTAGGGAGGGAAGAAA
GAAGGGAGGGAGGGAAGAAAGAAGGGAAGGAGGGGAGAAGAAAGGGAAAG
AGAGCAACTCTACCACATTTGAATTTGACCATCACCTCTTTTCGGCTTTC
CCGCCATTTGGGCCGTGAAAAGGTGTAAATGTAGAAAGACTCACATTGAT
CTGCTTTTCCCGCCCTCCTCCCCTCCCTCCCTCCCAGTATCCTGAAGGAG
GGCGCGGCGGCGGGCCACGCGGTGTGCGGTGGGCACATCAGCGGCATGTT
CGGCTTCTTCTTCACCGAGGGCCCCGTCCGATGCTTCAGTGACGCCGCCA
AGAGCGACACGGTGCGTCCTCTTGCCATCCACCTCCCCCCTCGGGCTCTC
TGCTTCTTAGTACTACTCTCTTACAGCCTCGCTTTCCCTGTCTTGAGGAA
AGCGAGAGAGGGCGAGTCGGGATGATTTCTAATGCCAGTTTTCCTTCATC
CCGTTAGGTGGAGCGTGTGTACTGATTTCTCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCTTCTGCCCTCCCTT
AGGCCAAGTTCGCTAAGTGGCATCGCGGCATGCTCGAGCGCGGCGTCTAC
CTGGCCCCCTCGCAGTATGAAGCAGGCTTCATGTCCCTAGCTCACACGGA
GGCCGACATCGATGCCACCATCGCAGCGGCCAGGGAGGTGTTCAAGACGC
TTTAAATGAAGAGAGAGAAGGCAAAGAGTTATTGTAGGGCAAGGAAAAGA
GGAAAAGCAGGGCAGTTTTGAGAGTAAGGAAATGTTTATCTTCTTCTGGT
GGTGCGAGAGGGGGGGGGAGGGAGTGCATAAGGGAGGGAAGAAAGGATCA
CTATACTACAATGGCGTAAAACCGCACGCGCATACCAAAGAAAAGAAAGA
AAGGAATGGAAGAAAGTTACA back to topCoding sequence (CDS) from alignment at chr15:20798..25268+ >NO15G00100.1 ID=NO15G00100.1|Name=NO15G00100.1|organism=Nannochloropsis oceanica|type=CDS|length=1392bp|location=Sequence derived from alignment at chr15:20798..25268+ (Nannochloropsis oceanica) ATGATGAAGCACGTCACAATCACGGCCCTCCTCTTGCCGACGCTGGCCAC GGCCTTCCTGGCACCCATCCCTGCCAAGCAACAAGTCCGCATGATGGCTG CGACCATGGCCCCGTTCAAGACCGACAAGTCCTCGGCCGTGTTTGAGGAG GCCAAGGGCATTATGCCCGGCGGCGTCTCTTCGCCCGTGCGTGCCTTCAA GTCTGTGGGCGGCAACCCCATTGTCTTCGATAAGGTGAAGGGCGCCTACG CCTGGGACGTGGATGGGAACAAGTACATCGACTACGTCGGCTCCTGGGGC CCGGCCATCGTGGGCCACGCGGATGACGAGGTCCTCAAGGTCTTGGGCGA GGTCATGGCCAAGGGCACCAGCTTCGGCGCCCCCTCCTCCTACGAAAATG TGCTTGCCAAGATGGTCATCGAGGCCGTTCCGTCGGTGGAGATGGTGCGC TTCACCAACAGCGGCACAGAGGCCTGTATGGGCATGCTCCGCCTCGTCCG CGCCTTCACCAAGAGGGAGAAGGTGATCAAGTTCGACGGCTGCTATCACG GCCACGCCGACGGTTTCCTGGTCCAAGCCGGCTCGGGGGTGGCGACTTTG GGACTGCCCGACTCCCCCGGCGTGCCGCAGGGCTCTACCGCCGGCACTCT GGTGGCGGAGTACAACAATCTGGCCAACGTCGAGCAGCTCCTCAAGGAGC ACGAGGTAGCGGCCGTGATTCTGGAGCCGGTGGTGGGCAACAGCGGCTTC ATCGCCCCCGACAAGTCCTTTTTGGAGGGCCTCCGCAAGCTGACCAAGGA GCACGGAGCCCTCCTCGTCTTCGATGAGGTCATGACCGGCTTCCGCATCT CTTATGGCGGGGCGCAGGAGTACTTCGGCGTCACCCCGGACATCACCACT ATGGGCAAGGTAATCGGCGGCGGTCTCCCCGTGGGAGCTTACGGCGGCCG CAAGGATATCATGTCCATGGTCGCCCCCGCCGGGCCCATGTATCAGGCTG GCACCCTTTCGGGGAACCCCCTGGCCATGACGGCCGGAATTAAGACTTTG GAGATTTTGAAGCGCCCGGGCTCGTACGAGAAGCTCGACAAGCTCACCGC CCGCCTCATTGATGGTATCCTGAAGGAGGGCGCGGCGGCGGGCCACGCGG TGTGCGGTGGGCACATCAGCGGCATGTTCGGCTTCTTCTTCACCGAGGGC CCCGTCCGATGCTTCAGTGACGCCGCCAAGAGCGACACGGCCAAGTTCGC TAAGTGGCATCGCGGCATGCTCGAGCGCGGCGTCTACCTGGCCCCCTCGC AGTATGAAGCAGGCTTCATGTCCCTAGCTCACACGGAGGCCGACATCGAT GCCACCATCGCAGCGGCCAGGGAGGTGTTCAAGACGCTTTAA back to top
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