NO15G00060.1, NO15G00060.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G00060.1
Unique Name	NO15G00060.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3618
Alignment location	chr15:11783..17150 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:11783..17150 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G00060.1 vs.
Match: XP_005852551.1 (abc transporter atpase, partial [Nannochloropsis gaditana CCMP526]; EKU23281.1 abc transporter atpase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 615.1 bits (1585), Expect = 2.400e-172
Identity = 304/342 (88.89%), Postives = 329/342 (96.20%), Query Frame = 0

Query:  116 MHVVLSGAVAGFPPESYSTPSRAVALADYLARMFVHAAKAAGDDQRVESGGWQGKKGGEIRMEPPGQHVLARTNVMIDVRGGGGVEARFTVALPARGRSIEGQWCSKILLERLPDLVARSLLFSSLDAAHLRAHILSVEDQDVLRSLLPAAGLVGFVRNGAILPRKSGHLDLPMDAATALPFKSPPSLEREVALPNAGKIRGMGVPKGITLIVGGGFHGKSTLLQALELGVYNHIPGDGREFVCVNPTAVKVRAEDGRAVTQVNITPFIDNLPFGKPTDSFSTADASGSTSQAANIVEALEVGSDCLLMDEDTCATNFMIRDFRMQLLVSRDKEPITPFLAK 458
            MHVV++G VA FPPESYSTP+RAVALADYL+RMFV AAKAAGDDQRVESGGWQGKKGGEI ME PGQHVLARTNV+IDVRGGGGVEARFTVALPARGRSIEG WCSKILLERLPDLVARSLLFSSLDAAHLRAHILSVEDQ+VLRSLLP+AGLVGF+RNGA+LPRKSGH+DLPMDAATALPF+SP +LEREV LPNAG+++GMG+PKGITLIVGGGFHGKSTLLQALELG++NHIPGDGREFVCV+P+AVKVRAEDGRAVT+VNITPFIDNLPFGK TDSF TADASGSTSQAA+I+EALEVG+  LLMDEDTCATNFMIRD RMQLLVS+DKEPITPFLAK
Sbjct:    1 MHVVVAGDVANFPPESYSTPTRAVALADYLSRMFVRAAKAAGDDQRVESGGWQGKKGGEITMEAPGQHVLARTNVIIDVRGGGGVEARFTVALPARGRSIEGLWCSKILLERLPDLVARSLLFSSLDAAHLRAHILSVEDQEVLRSLLPSAGLVGFIRNGALLPRKSGHVDLPMDAATALPFQSPHTLEREVTLPNAGRVKGMGIPKGITLIVGGGFHGKSTLLQALELGIHNHIPGDGREFVCVDPSAVKVRAEDGRAVTEVNITPFIDNLPFGKRTDSFCTADASGSTSQAASIIEALEVGAQVLLMDEDTCATNFMIRDLRMQLLVSKDKEPITPFLAK 342

The following BLAST results are available for this feature:

BLAST of NO15G00060.1 vs.

BLAST of NO15G00060.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005852551.1	2.400e-172	88.89	abc transporter atpase, partial [Nannochloropsis g...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G00060	NO15G00060	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00060.1	NO15G00060.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00060.1.cds1	NO15G00060.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00060.1.cds2	NO15G00060.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00060.1.cds3	NO15G00060.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00060.1.cds4	NO15G00060.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00060.1.cds5	NO15G00060.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00060.1.cds6	NO15G00060.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00060.1.cds7	NO15G00060.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00060.1.cds8	NO15G00060.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:11783..17150+
coding sequence from alignment at chr15:11783..17150+

mRNA sequence

>NO15G00060.1 ID=NO15G00060.1|Name=NO15G00060.1|organism=Nannochloropsis oceanica|type=mRNA|length=3618bp
CTTCTCTAATTAAATTGTTCGAAGTAAATTCGAACAATCCCTTCTTCTAT
TGCATTTATTTATCTCTTCCTTTCCATTTACCCACCATCCAAGACTCAAG
GCGCCTCACTCGACGTTTGGTCCGTGACTTCCCATCCCTCAAATCTACCA
AATCCCTTCCTGTACCGCATCATGACCATTTGCACAGACACACAGGCTAC
CTCTGTACATCGCGTCCCCCTCTATAAAACAACCTTGATCCCCTCGTGCA
ATGCGTGCCACGGCGGTACGAGCATGCTCATCACCACCACAAACACGCCA
TGCGGCATCCCTTGCCTTCCTTCTTCAGACTGCAGGCCCATAAGAAAGCC
CATCAAAGGCACTCCTTCGTCTTCCATATCTAGCTCAAGGAATGGTTTCT
CCTCGCTTTCCTTCAAGTTTAGTTCACCCCTTTTAACCGGCAACTGTGCC
TCTGACCGCCCACCTGCCACCTGGCGAATCTTAATGAGACATGCCGCGCG
CTGCGCGTCCCTGGCTTCTTCAACGAAGGCTAAATGGAGAGGCTCCACCG
GAGGGTGCTCCAGTAGTATCTGTAGGCTGTCATGTCCATATACGTTGGGC
AAGGTGGGATCGGCGCCGGCCACGAGCAGGTGGCGGAGGATGGCAAGTTT
GGCCGTCGGAGTGATGTTGTTGAAACAACATGCAAGGTGGAGGGCACTGA
AGCCATCGAAGTCGTCCTCCTCCGCCACATTATCTATGCTGGCGCGCACC
CTTGGATCTTCCAAAAGGCGCGCAACGCATTCAGGCCTACCTGCTCGGAC
ATGGTGCATCAGCGGCGTCCAACCCTTATCGTTCCGAACAACGGGTTCAG
CACCTCGGTCCATCAAGAGGCCAAGGACTTCTGCATCAGTTACGTGATGG
ATGGCTGTGCTACCATTGATCGTCCGGCCGTCAACATCAACGCCTCTCGA
TACCAGTAGATAAGAAACGAGGTCGTAGCTTCCTCTCCGAGCGGCGGCCC
ACAAGGGCGTATTGCCGCGAGAGTCCCTTGCTTCCGACTGCCTTGGGTTT
CGGACAATCCACGTGGTGAGTTGAGCCATCCCTAGGGTCAGGAAGTTCAT
ATCTTCGGCCTTGTGATCAACTGCCATATCTGTGCGGGTGTCATCACCCC
TAGCGCGGAAAAAGTATGGGGCACATCCAATGAGGAGGGCAGGCAATGAC
AATGGACGAAGGAGAGGTTGGGCACGCGGAAGGCCGGCAGCACGCGGTGT
GGTAGAAACTATCGTATGGGGAGGGTTTTATCTACGTGCGTGCGCGATTT
GTTTTTTTTTGTGTGTTTGTGAGTATAGAGAGTGACTGGGAGGTAGGCCG
CTGACGAAATAATATACTTCGCCGACGACTTTACAATACATCATAACCGA
TCGATTTATTAATCCTTTTGTGAGTTCAATATTGACCTTGGTTAAGCCTC
TTAATCTATCGAAATATCCATGATTAGGTTAGGAGGAGGAAGCTTGGGCC
TCAATTCATACCACCGGCTAACCTCCCGTCGCTTTGTCTGTGGGCGTACT
TTAAGTGGTGAAGTTTCCAGGGGATGGCAAGGCGCGCACGCAAGCCCTGG
GAGAAAAGGCAAACAAGATCAAGCAGCAGGGACGAGAAATGAGCGGACGC
GGCGGAGGTGGCGGGCGTGGGGAGTACTACAAGAACAAGTACGGTGGAGG
TGGGCGTGGTGGAGGGGGAGGACGGGGTGGAGGAGGCAGGGGAGGTGGTA
GGGGTGGTTTCGACGACTCCTTTTCGTCGTCGTCCTCTTCATTCGGAGGT
GGTGGAGGTGGTGGTCCCCCGCGCAGCGCCGACGATTTGCGTGCTTTGCT
TCGTCGCATCGATGGGGCCGCGTATCCGGCATACCGAGACATGGAGCACT
CCCCGTTTGACTTTGGGGGCCGGGCGGCCTTTCGGCTGAGTGTGGACAGG
TGCCAGTCGGATCCATTTGCACCGCCCACGCGCATGCATGTCGTCTTGTC
CGGGGCCGTGGCTGGTTTTCCGCCCGAGTCCTACTCTACCCCTTCGCGTG
CCGTGGCCCTGGCAGACTATCTGGCGCGGATGTTTGTGCATGCGGCCAAG
GCTGCCGGTGATGACCAGAGGGTTGAAAGCGGAGGGTGGCAGGGAAAAAA
GGGCGGGGAGATCAGGATGGAGCCTCCAGGGCAGCATGTCTTGGCGCGGA
CGAATGTCATGATCGATGTGCGGGGAGGAGGAGGGGTGGAGGCCCGCTTC
ACGGTGGCTTTGCCCGCGCGAGGACGTAGCATTGAGGGCCAGTGGTGCAG
CAAGATCCTGCTGGAGCGCCTTCCCGACCTGGTGGCCCGCTCTCTCCTCT
TCTCCTCCCTGGACGCCGCCCATCTCCGCGCCCACATCCTGTCCGTGGAA
GACCAGGACGTGCTCCGCTCCCTCTTGCCGGCCGCGGGCTTGGTGGGCTT
CGTTCGCAACGGCGCCATCCTTCCACGCAAGTCTGGGCACCTGGACCTGC
CCATGGATGCCGCCACCGCCCTCCCCTTCAAGTCGCCCCCGTCCCTGGAG
CGGGAGGTGGCGCTGCCGAACGCCGGCAAGATTAGGGGCATGGGTGTTCC
CAAAGGCATCACACTCATCGTGGGCGGAGGCTTCCATGGAAAGAGCACGC
TGCTGCAGGCCCTGGAGCTGGGCGTGTACAACCACATCCCGGGCGACGGA
CGGGAGTTCGTTTGCGTCAACCCCACGGCCGTCAAGGTGCGGGCGGAGGA
TGGGCGGGCCGTCACACAGGTGAACATCACCCCCTTCATCGACAACCTGC
CCTTCGGGAAGCCCACCGATAGCTTTTCCACCGCCGACGCCTCGGGCTCC
ACCTCCCAGGCCGCCAACATCGTCGAGGCCCTCGAGGTCGGCTCGGACTG
CCTGCTGATGGACGAGGATACGTGCGCCACGAATTTCATGATACGCGACT
TCCGGATGCAGCTGCTCGTCTCCAGGGACAAGGAGCCCATCACCCCCTTC
CTCGCCAAAGTCCAAGCCCTCTACAACCAGCAAGGCGTCTCTTCCCTGCT
CGTTATCGGCGGGGCGGGCGACTACTTCGATGTGGCCACCACTGTCATCA
TGATGGATAACTACGAGCCCCTCGATAAGACAGCGGAAGCCAAGGCCATC
GCGGCGCAGTACTCCTCCAATGCGGGCTCCTCTTTCTTCGCCGCCCATTT
CGGTACACTCTCCCGCCGCTTCCCCATCCCTGCCTCACTGCAGACGGAGG
GCAAGGTGGTGGCCCGTGGGAGGGACAAGCTGCAGTACGGCGAGGAGGAC
GTGGACCTGGGCGGCGTCGAGCAGCTGGTGGAGATCGGGCAAACCCGGGC
GATTGGCTTCGCCTTTCAAGCCCTGGCCAAGCTGGGGTCCAAGCCGACGA
GCGTAAGGGAGTGCGTGGAGGCCATGGAGTGCTGGATGGAGGGAGGACTA
GACGGGCTGGTGGGAGGGGGGCAGGGAAGAATCGAAGCAGGGAAAGCGCA
GGCGGTAGGGGACTTGGCGAAGCCCCGGAGATTTGAAATCGCGGCGGCCT
TGAACCGTTTCCGGTCGTTACAAGCCAAGAGCGAGGTGGTGCGGCCCTAG
GCGGGGGTGTCATGAGAA

protein sequence of NO15G00060.1

>NO15G00060.1-protein ID=NO15G00060.1-protein|Name=NO15G00060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=654bp
MSGRGGGGGRGEYYKNKYGGGGRGGGGGRGGGGRGGGRGGFDDSFSSSSS
SFGGGGGGGPPRSADDLRALLRRIDGAAYPAYRDMEHSPFDFGGRAAFRL
SVDRCQSDPFAPPTRMHVVLSGAVAGFPPESYSTPSRAVALADYLARMFV
HAAKAAGDDQRVESGGWQGKKGGEIRMEPPGQHVLARTNVMIDVRGGGGV
EARFTVALPARGRSIEGQWCSKILLERLPDLVARSLLFSSLDAAHLRAHI
LSVEDQDVLRSLLPAAGLVGFVRNGAILPRKSGHLDLPMDAATALPFKSP
PSLEREVALPNAGKIRGMGVPKGITLIVGGGFHGKSTLLQALELGVYNHI
PGDGREFVCVNPTAVKVRAEDGRAVTQVNITPFIDNLPFGKPTDSFSTAD
ASGSTSQAANIVEALEVGSDCLLMDEDTCATNFMIRDFRMQLLVSRDKEP
ITPFLAKVQALYNQQGVSSLLVIGGAGDYFDVATTVIMMDNYEPLDKTAE
AKAIAAQYSSNAGSSFFAAHFGTLSRRFPIPASLQTEGKVVARGRDKLQY
GEEDVDLGGVEQLVEIGQTRAIGFAFQALAKLGSKPTSVRECVEAMECWM
EGGLDGLVGGGQGRIEAGKAQAVGDLAKPRRFEIAAALNRFRSLQAKSEV
VRP*

mRNA from alignment at chr15:11783..17150+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G00060.1 ID=NO15G00060.1|Name=NO15G00060.1|organism=Nannochloropsis oceanica|type=mRNA|length=5368bp|location=Sequence derived from alignment at chr15:11783..17150+ (Nannochloropsis oceanica)
CTTCTCTAATTAAATTGTTCGAAGTAAATTCGAACAATCCCTTCTTCTAT
TGCATTTATTTATCTCTTCCTTTCCATTTACCCACCATCCAAGACTCAAG
GCGCCTCACTCGACGTTTGGTCCGTGACTTCCCATCCCTCAAATCTACCA
AATCCCTTCCTGTACCGCATCATGACCATTTGCACAGACACACAGGCTAC
CTCTGTACATCGCGTCCCCCTCTATAAAACAACCTTGATCCCCTCGTGCA
ATGCGTGCCACGGCGGTACGAGCATGCTCATCACCACCACAAACACGCCA
TGCGGCATCCCTTGCCTTCCTTCTTCAGACTGCAGGCCCATAAGAAAGCC
CATCAAAGGCACTCCTTCGTCTTCCATATCTAGCTCAAGGAATGGTTTCT
CCTCGCTTTCCTTCAAGTTTAGTTCACCCCTTTTAACCGGCAACTGTGCC
TCTGACCGCCCACCTGCCACCTGGCGAATCTTAATGAGACATGCCGCGCG
CTGCGCGTCCCTGGCTTCTTCAACGAAGGCTAAATGGAGAGGCTCCACCG
GAGGGTGCTCCAGTAGTATCTGTAGGCTGTCATGTCCATATACGTTGGGC
AAGGTGGGATCGGCGCCGGCCACGAGCAGGTGGCGGAGGATGGCAAGTTT
GGCCGTCGGAGTGATGTTGTTGAAACAACATGCAAGGTGGAGGGCACTGA
AGCCATCGAAGTCGTCCTCCTCCGCCACATTATCTATGCTGGCGCGCACC
CTTGGATCTTCCAAAAGGCGCGCAACGCATTCAGGCCTACCTGCTCGGAC
ATGGTGCATCAGCGGCGTCCAACCCTTATCGTTCCGAACAACGGGTTCAG
CACCTCGGTCCATCAAGAGGCCAAGGACTTCTGCATCAGTTACGTGATGG
ATGGCTGTGCTACCATTGATCGTCCGGCCGTCAACATCAACGCCTCTCGA
TACCAGTAGATAAGAAACGAGGTCGTAGCTTCCTCTCCGAGCGGCGGCCC
ACAAGGGCGTATTGCCGCGAGAGTCCCTTGCTTCCGACTGCCTTGGGTTT
CGGACAATCCACGTGGTGAGTTGAGCCATCCCTAGGGTCAGGAAGTTCAT
ATCTTCGGCCTTGTGATCAACTGCCATATCTGTGCGGGTGTCATCACCCC
TAGCGCGGAAAAAGTATGGGGCACATCCAATGAGGAGGGCAGGCAATGAC
AATGGACGAAGGAGAGGTTGGGCACGCGGAAGGCCGGCAGCACGCGGTGT
GGTAGAAACTATCGTATGGGGAGGGTTTTATCTACGTGCGTGCGCGATTT
GTTTTTTTTTGTGTGTTTGTGAGTATAGAGAGTGACTGGGAGGTAGGCCG
CTGACGAAATAATATACTTCGCCGACGACTTTACAATACATCATAACCGA
TCGATTTATTAATCCTTTTGTGAGTTCAATATTGACCTTGGTTAAGCCTC
TTAATCTATCGAAATATCCATGATTAGGTTAGGAGGAGGAAGCTTGGGCC
TCAATTCATACCACCGGCTAACCTCCCGTCGCTTTGTCTGTGGGCGTACT
TTAAGTGGTGAAGTTTCCAGGGGATGGTATGTGGGGTGGCAATTCTACTT
ATCGGATTAATACTGATTTCATCTGCATAACTGGGGCAGCATGTTTCGCG
GTGTTCATCCACGAAATTGGCAAGCATTATCAACCTCTTTAGGGCCGGGC
AAAGGCTCTAGAGTACCTAGTTTGCCTCCAGTCTCCACTGGTGGGGTCAT
CGTTGTCCCCCACAGCTCCCCTATCAGCCATAGCTTGTGGTTGTGTTGTA
AAGCAAATCTTATGCTGTCGTTTGCTGTCTTTGGTGCCCGGTTGACATGT
GTGTGCGAACCCAGCCACTCGATCCATACCACGCATAGGCAAGGCGCGCA
CGCAAGCCCTGGGAGAAAAGGCAAACAAGATCAAGCAGCAGGGACGAGAA
ATGAGCGGACGCGGCGGAGGTGGCGGGCGTGGGGAGTACTACAAGAACAA
GTACGGTGGAGGTGGGCGTGGTGGAGGGGGAGGACGGGGTGGAGGAGGCA
GGGGAGGTGGTAGGGGTGGTTTCGACGACTCCTTTTCGTCGTCGTCCTCT
TCATTCGGAGGTGGTGGAGGTGGTGGTCCCCCGCGCAGCGCCGACGATTT
GCGTGCTTTGCTTCGTCGCATCGATGGGGCCGCGTATCCGGCATACCGAG
ACATGGAGCACTCCCCGTTTGACTTTGGGGGCCGGGCGGCCTTTCGGCTG
AGTGTGGACAGGTGCCAGTCGGATCCATTTGCACCGCCCACGCGCATGCA
TGTCGTCTTGTCCGGGGCCGTGGCTGGTTTTCCGCCCGAGTCCTACTCTA
CCCCTTCGCGTGCCGTGGCCCTGGCAGACTATCTGGCGCGGATGTTTGTG
CATGCGGCCAAGGCTGCCGGTGATGACCAGAGGGTTGAAAGCGGAGGGTG
GCAGGGAAAAAAGGGCGGGGAGATCAGGATGGAGCCTCCAGGGCAGCATG
TCTTGGCGCGGACGAATGTCATGATCGATGTGCGGGGAGGAGGAGGGGTG
GAGGCCCGCTTCACGGTGGCTTTGCCCGCGCGAGGACGTAGCATTGAGGG
CCAGTGGTGCAGCAAGATCCTGCTGGAGCGCCTTCCCGACCTGGTGGCCC
GCTCTCTCCTCTTCTCCTCCCTGGACGCCGCCCATCTCCGCGCCCACATC
CTGTCCGTGGAAGACCAGGACGTGCTCCGCTCCCTCTTGCCGGCCGCGGG
CTTGGTGGGCTTCGTTCGCAACGGCGCCATCCTTCCACGCAAGTCTGGGC
ACCTGGACCTGCCCATGGATGCCGCCACCGCCCTCCCCTTCAAGTCGCCC
CCGTCCCTGGAGCGGGAGGTGGCGCTGCCGAACGCCGGCAAGATTAGGGG
CATGGGTGTTCCCAAAGGCATCACACTCATCGTGGGCGGAGGCTTCCATG
GAAAGAGCACGGTAAGTGATGGTCATCCCCACCCTCCCTGTCCTCCTCCC
TCCTTCGCTGTTACAACTGCCGTAGTCCTCGGTCCCACACTTGACGCGCG
CGCCCTCCTTCCCTCCCTCCCTCCCTTCATTTTCCCTTCCGGCCCTCCTC
CTCGCAGCTGCTGCCAGCCCTTGGACTGCCTCCGCGTTTACATCTAATGA
TGGCCACCCTTTCCAACCTTCCTTTCACTCCCACCTTCCCTTTCCCCCTC
CCTCCCTCCTCTCGTCCCCCTCGTCTCACTACAGCTGCTGCAGGCCCTGG
AGCTGGGCGTGTACAACCACATCCCGGGCGACGGACGGGAGTTCGTTTGC
GTCAACCCCACGGCCGTCAAGGTGCGGGCGGAGGATGGGCGGGCCGTCAC
ACAGGTAGGGAGGGAAGAGAGGTTGAGAGGGAAGGGAGGTTAGGAGGGAA
GGGAGGAGATGGTTCGTTGCGCCGGTGGCTCGTAAAGGCAGGAAGAGAGA
CAGAGGTGTGCATAATGCAGAGGTGTGTAAAAAAGCAGGGGTGTGTGTGT
TGGCATCGAGGGGTCTATTGGCGCCTTCCCCCCTCACGCTTCCTCCCCCG
CTCCTTTCCTACCTCGTCCCGCCCCAGGTGAACATCACCCCCTTCATCGA
CAACCTGCCCTTCGGGAAGCCCACCGATAGCTTTTCCACCGCCGACGCCT
CGGGCTCCACCTCCCAGGCCGCCAACATCGTCGAGGCCCTCGAGGTGCAA
TGAGCCCCCTTGCTCCCTCTTCCTCTTCCTCCCTCTCTCCCACCTTCTTC
CCCTTCCTCCCTCTTAACGCGCCCTCCCCTTGATTTTCTTCGAAGGTATC
CACTAGATCCTCTAGGCCACGACCGTCGACTCATCCCTCCCTCCCTCCCT
CCCTCCCTACCCCCCTCTTCCCTCCGTCTTTCTATCCCTCCGGCCAGGTC
GGCTCGGACTGCCTGCTGATGGACGAGGATACGTGCGCCACGAATTTCAT
GATACGCGACTTCCGGATGCAGCTGCTCGTCTCCAGGGACAAGGAGCCCA
TCACCCCCTTCCTCGCCAAAGTACGTGGAGCTCCCTCCCTCCCTCCCTCC
CTCGCCCAGGTCTCATCAGAGCATGCTCTGCGTGGCCTCTCTTCGTCGTT
CCTCCTTCCTAGTCACCGTCCTTCCCTCCCTCTGTCATCGTTCCCTCCTT
CCCTCCCTTCAGGTCCAAGCCCTCTACAACCAGCAAGGCGTCTCTTCCCT
GCTCGTTATCGGCGGGGCGGGCGACTACTTCGATGTGGCCACCACTGTCA
TCATGATGGATAACTACGAGCCCCTCGATAAGGTACGTAGTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTTCTCCTTCACGCCG
CGTGGCGCCTGCAGAAATGAACCTTGTATTCAAGTCAGCTCCCTCCCTCC
CTCCTTCCCTCCCTCCTCCCTCCCTCCCGCCCCCCTTCCTCCCCTCCCTC
CCTCCTTCCTACCACCAGACAGCGGAAGCCAAGGCCATCGCGGCGCAGTA
CTCCTCCAATGCGGGCTCCTCTTTCTTCGCCGCCCATTTCGGTACACTCT
CCCGCCGCTTCCCCATCCCTGCCTCACTGCAGACGGAGGTACGAAGGGAA
GAAGAAGGGAGGGAGAGGGGAAGAGAGGGAGGGAAGGAGGATCGGTGGTG
GTGGGGTGGGAGGCGATTGTGGAGACAGCTCTCTTGCGTAACGCCTCAAT
TCATTCCGTGTGTCTCCCCCTCCCTCCATTTCGTCCGACAAACCCACCCA
TGGCGCGTGTTTTCTTTCTTTCCTTCCCCTCGTCTTCTCCCATTAGGGCA
AGGTGGTGGCCCGTGGGAGGGACAAGCTGCAGTACGGCGAGGAGGACGTG
GACCTGGGCGGCGTCGAGCAGCTGGTGGAGGTAAGGCGCGATGAAGCCGT
CGTCCCTCCCTCCTCCTCCTTCCCCCCACCCTACCCTGCTGCCTCCCTAT
CCCTTACGGCTCATCACGTCATTGTCTGCTATCAACAGCCACACTGTCTA
GGTTACCCTGCAGCCCACGTTCTCCTCATAACCTTCCCTCCTTCTCGTTG
TCCCTCCCTCCCTCCCTTCCTCCCTCTCACCAGATCGGGCAAACCCGGGC
GATTGGCTTCGCCTTTCAAGCCCTGGCCAAGCTGGGGTCCAAGCCGACGA
GCGTAAGGGAGTGCGTGGAGGCCATGGAGTGCTGGATGGAGGGAGGACTA
GACGGGCTGGTGGGAGGGGGGCAGGGAAGAATCGAAGCAGGGAAAGCGCA
GGCGGTAGGGGACTTGGCGAAGCCCCGGAGATTTGAAATCGCGGCGGCCT
TGAACCGTTTCCGGTCGTTACAAGCCAAGAGCGAGGTGGTGCGGCCCTAG
GCGGGGGTGTCATGAGAA

Coding sequence (CDS) from alignment at chr15:11783..17150+

>NO15G00060.1 ID=NO15G00060.1|Name=NO15G00060.1|organism=Nannochloropsis oceanica|type=CDS|length=1962bp|location=Sequence derived from alignment at chr15:11783..17150+ (Nannochloropsis oceanica)
ATGAGCGGACGCGGCGGAGGTGGCGGGCGTGGGGAGTACTACAAGAACAA
GTACGGTGGAGGTGGGCGTGGTGGAGGGGGAGGACGGGGTGGAGGAGGCA
GGGGAGGTGGTAGGGGTGGTTTCGACGACTCCTTTTCGTCGTCGTCCTCT
TCATTCGGAGGTGGTGGAGGTGGTGGTCCCCCGCGCAGCGCCGACGATTT
GCGTGCTTTGCTTCGTCGCATCGATGGGGCCGCGTATCCGGCATACCGAG
ACATGGAGCACTCCCCGTTTGACTTTGGGGGCCGGGCGGCCTTTCGGCTG
AGTGTGGACAGGTGCCAGTCGGATCCATTTGCACCGCCCACGCGCATGCA
TGTCGTCTTGTCCGGGGCCGTGGCTGGTTTTCCGCCCGAGTCCTACTCTA
CCCCTTCGCGTGCCGTGGCCCTGGCAGACTATCTGGCGCGGATGTTTGTG
CATGCGGCCAAGGCTGCCGGTGATGACCAGAGGGTTGAAAGCGGAGGGTG
GCAGGGAAAAAAGGGCGGGGAGATCAGGATGGAGCCTCCAGGGCAGCATG
TCTTGGCGCGGACGAATGTCATGATCGATGTGCGGGGAGGAGGAGGGGTG
GAGGCCCGCTTCACGGTGGCTTTGCCCGCGCGAGGACGTAGCATTGAGGG
CCAGTGGTGCAGCAAGATCCTGCTGGAGCGCCTTCCCGACCTGGTGGCCC
GCTCTCTCCTCTTCTCCTCCCTGGACGCCGCCCATCTCCGCGCCCACATC
CTGTCCGTGGAAGACCAGGACGTGCTCCGCTCCCTCTTGCCGGCCGCGGG
CTTGGTGGGCTTCGTTCGCAACGGCGCCATCCTTCCACGCAAGTCTGGGC
ACCTGGACCTGCCCATGGATGCCGCCACCGCCCTCCCCTTCAAGTCGCCC
CCGTCCCTGGAGCGGGAGGTGGCGCTGCCGAACGCCGGCAAGATTAGGGG
CATGGGTGTTCCCAAAGGCATCACACTCATCGTGGGCGGAGGCTTCCATG
GAAAGAGCACGCTGCTGCAGGCCCTGGAGCTGGGCGTGTACAACCACATC
CCGGGCGACGGACGGGAGTTCGTTTGCGTCAACCCCACGGCCGTCAAGGT
GCGGGCGGAGGATGGGCGGGCCGTCACACAGGTGAACATCACCCCCTTCA
TCGACAACCTGCCCTTCGGGAAGCCCACCGATAGCTTTTCCACCGCCGAC
GCCTCGGGCTCCACCTCCCAGGCCGCCAACATCGTCGAGGCCCTCGAGGT
CGGCTCGGACTGCCTGCTGATGGACGAGGATACGTGCGCCACGAATTTCA
TGATACGCGACTTCCGGATGCAGCTGCTCGTCTCCAGGGACAAGGAGCCC
ATCACCCCCTTCCTCGCCAAAGTCCAAGCCCTCTACAACCAGCAAGGCGT
CTCTTCCCTGCTCGTTATCGGCGGGGCGGGCGACTACTTCGATGTGGCCA
CCACTGTCATCATGATGGATAACTACGAGCCCCTCGATAAGACAGCGGAA
GCCAAGGCCATCGCGGCGCAGTACTCCTCCAATGCGGGCTCCTCTTTCTT
CGCCGCCCATTTCGGTACACTCTCCCGCCGCTTCCCCATCCCTGCCTCAC
TGCAGACGGAGGGCAAGGTGGTGGCCCGTGGGAGGGACAAGCTGCAGTAC
GGCGAGGAGGACGTGGACCTGGGCGGCGTCGAGCAGCTGGTGGAGATCGG
GCAAACCCGGGCGATTGGCTTCGCCTTTCAAGCCCTGGCCAAGCTGGGGT
CCAAGCCGACGAGCGTAAGGGAGTGCGTGGAGGCCATGGAGTGCTGGATG
GAGGGAGGACTAGACGGGCTGGTGGGAGGGGGGCAGGGAAGAATCGAAGC
AGGGAAAGCGCAGGCGGTAGGGGACTTGGCGAAGCCCCGGAGATTTGAAA
TCGCGGCGGCCTTGAACCGTTTCCGGTCGTTACAAGCCAAGAGCGAGGTG
GTGCGGCCCTAG

Synonyms

Publications