NO15G00010.1, NO15G00010.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G00010.1
Unique NameNO15G00010.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1455
Alignment locationchr15:634..2088 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:634..2088 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G00010.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G00010NO15G00010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G00010.1NO15G00010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G00010.1.cds1NO15G00010.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G00010.1 ID=NO15G00010.1|Name=NO15G00010.1|organism=Nannochloropsis oceanica|type=mRNA|length=1455bp
ATGACAGGCAGCTGTCCTTATTGTGCCCTCGTGGAGCTGGCCGACGCGTA
TGTGAGGAGGAGGATGCTGCCGCAGCAGCATGAATTACAACCAGGGCAGA
AATGCAATTTTCGTCAGCCCGACACGCTCACCCTTTACCATCATCTGGCC
CGTCTCCTTGCCCAAGGCTACCACCGCGCCTCGTTTTCCCAACTGAACCC
GGCCACGCATTTTCCTTCCTTGACCTTCGTCTCCTCTACTCCTCCGCTCC
TAGCTGGCTGGCGCTCTCAGCTGCACCAATCCCTGCATCGCGCTCTAGTC
TTGCCTCGCTCATCGAGCAGGGGAGAGGACGGTGGAGACAACGATAGAGA
GGACGAGGAAATAATGGGCTCGTTTTGGAATGCTCTAGCTCCACCTCAGC
ACCGCCATCGTCCTCAGTTTAAGCAGCGCCAGCACAACGCGCGTGGAGGT
GGGGACCATCGCAGCATACGAGACGGCGACGACGCCCTTTCGCAGTGGTC
CTGCAAGGCAGCAGTAGCTTCTGGGTTATGCAATGAGGTGTGCCGCGCGC
TTCTCGCCCTGCAACAATCTCAGCAGTCGCAAGTAGTGGCTCAGCGGGTG
CTTGGTCTCATTTTGATGCATGTCGCGGCTGGCCGCGGGGATGCGCGAGC
AGGAAGGCATGGGAAAGCGGAAGGGGGGGAAGGGGAGAAGGAGAAGAAAA
GAAACGGCCTTGAAGTGGAGGCTCTGATGATAGGCAAGGGCAGCCGGAGG
GTGCCCTCATCCACTCTCCTTTCCTTCTCTACCCCCTTGCTTGTTGCCCT
CCGGACCTCTCTTACCCTGGGACCCGCCCTGTCACCCGCCCAGCTTGATA
TCACCATCCGCCCGTGCTACTTCGTCTCGGCTGCTTCCAATCGCTGTCGT
CCTCCACCCCCCGTACTTTCCCCCGCCGCGGCCGCCCGCCTGGTTGCCGT
CGCCCGTGAACTCCCCCAGCAGCTGTCGGTCCCCTTTCTGGTGGCTTTGT
TGCGTGCGTTGAGGCACGAGGAGGAAAACCTCAAAGAGAAGGGTGAAGGA
GGGAGTATTAAGAGTGAAGTCCTGGAAGGAGAGGAAACAGAACGAGAAGG
GAGAGGGGAGAGGGCAAGAAATGGGAGCCAGGGTGCGGAACTGGCAGAGA
CCGGGTCAAATTTCAATGTCGCAGAGCAGCTGCAGGCCCGACCTCATTTT
ACGCGAACGGTAGCAACCCCACATCGTCCATTATCACTGCCGTCACCACC
ACCGCCAGCAGCAGGAGCAACAGTGGCAGTTGCCTATTTCCCCCTTGACC
AAGTTCTCCAACTCTTCCTCGGCTGTCTCCACGACATTTTCCTCCGCAGC
CCGACACACGTGCAAGACGCCCTTGCCTCTGCCTTGCAGCCAACAGCGGC
TACGCTCTCACCGGGGTTTCCTTCCGCCCGCCCTCGTTCGTGGGTTTCCT
ACTAG
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protein sequence of NO15G00010.1

>NO15G00010.1-protein ID=NO15G00010.1-protein|Name=NO15G00010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bp
MTGSCPYCALVELADAYVRRRMLPQQHELQPGQKCNFRQPDTLTLYHHLA
RLLAQGYHRASFSQLNPATHFPSLTFVSSTPPLLAGWRSQLHQSLHRALV
LPRSSSRGEDGGDNDREDEEIMGSFWNALAPPQHRHRPQFKQRQHNARGG
GDHRSIRDGDDALSQWSCKAAVASGLCNEVCRALLALQQSQQSQVVAQRV
LGLILMHVAAGRGDARAGRHGKAEGGEGEKEKKRNGLEVEALMIGKGSRR
VPSSTLLSFSTPLLVALRTSLTLGPALSPAQLDITIRPCYFVSAASNRCR
PPPPVLSPAAAARLVAVARELPQQLSVPFLVALLRALRHEEENLKEKGEG
GSIKSEVLEGEETEREGRGERARNGSQGAELAETGSNFNVAEQLQARPHF
TRTVATPHRPLSLPSPPPPAAGATVAVAYFPLDQVLQLFLGCLHDIFLRS
PTHVQDALASALQPTAATLSPGFPSARPRSWVSY*
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mRNA from alignment at chr15:634..2088+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G00010.1 ID=NO15G00010.1|Name=NO15G00010.1|organism=Nannochloropsis oceanica|type=mRNA|length=1455bp|location=Sequence derived from alignment at chr15:634..2088+ (Nannochloropsis oceanica)
ATGACAGGCAGCTGTCCTTATTGTGCCCTCGTGGAGCTGGCCGACGCGTA
TGTGAGGAGGAGGATGCTGCCGCAGCAGCATGAATTACAACCAGGGCAGA
AATGCAATTTTCGTCAGCCCGACACGCTCACCCTTTACCATCATCTGGCC
CGTCTCCTTGCCCAAGGCTACCACCGCGCCTCGTTTTCCCAACTGAACCC
GGCCACGCATTTTCCTTCCTTGACCTTCGTCTCCTCTACTCCTCCGCTCC
TAGCTGGCTGGCGCTCTCAGCTGCACCAATCCCTGCATCGCGCTCTAGTC
TTGCCTCGCTCATCGAGCAGGGGAGAGGACGGTGGAGACAACGATAGAGA
GGACGAGGAAATAATGGGCTCGTTTTGGAATGCTCTAGCTCCACCTCAGC
ACCGCCATCGTCCTCAGTTTAAGCAGCGCCAGCACAACGCGCGTGGAGGT
GGGGACCATCGCAGCATACGAGACGGCGACGACGCCCTTTCGCAGTGGTC
CTGCAAGGCAGCAGTAGCTTCTGGGTTATGCAATGAGGTGTGCCGCGCGC
TTCTCGCCCTGCAACAATCTCAGCAGTCGCAAGTAGTGGCTCAGCGGGTG
CTTGGTCTCATTTTGATGCATGTCGCGGCTGGCCGCGGGGATGCGCGAGC
AGGAAGGCATGGGAAAGCGGAAGGGGGGGAAGGGGAGAAGGAGAAGAAAA
GAAACGGCCTTGAAGTGGAGGCTCTGATGATAGGCAAGGGCAGCCGGAGG
GTGCCCTCATCCACTCTCCTTTCCTTCTCTACCCCCTTGCTTGTTGCCCT
CCGGACCTCTCTTACCCTGGGACCCGCCCTGTCACCCGCCCAGCTTGATA
TCACCATCCGCCCGTGCTACTTCGTCTCGGCTGCTTCCAATCGCTGTCGT
CCTCCACCCCCCGTACTTTCCCCCGCCGCGGCCGCCCGCCTGGTTGCCGT
CGCCCGTGAACTCCCCCAGCAGCTGTCGGTCCCCTTTCTGGTGGCTTTGT
TGCGTGCGTTGAGGCACGAGGAGGAAAACCTCAAAGAGAAGGGTGAAGGA
GGGAGTATTAAGAGTGAAGTCCTGGAAGGAGAGGAAACAGAACGAGAAGG
GAGAGGGGAGAGGGCAAGAAATGGGAGCCAGGGTGCGGAACTGGCAGAGA
CCGGGTCAAATTTCAATGTCGCAGAGCAGCTGCAGGCCCGACCTCATTTT
ACGCGAACGGTAGCAACCCCACATCGTCCATTATCACTGCCGTCACCACC
ACCGCCAGCAGCAGGAGCAACAGTGGCAGTTGCCTATTTCCCCCTTGACC
AAGTTCTCCAACTCTTCCTCGGCTGTCTCCACGACATTTTCCTCCGCAGC
CCGACACACGTGCAAGACGCCCTTGCCTCTGCCTTGCAGCCAACAGCGGC
TACGCTCTCACCGGGGTTTCCTTCCGCCCGCCCTCGTTCGTGGGTTTCCT
ACTAG
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Coding sequence (CDS) from alignment at chr15:634..2088+

>NO15G00010.1 ID=NO15G00010.1|Name=NO15G00010.1|organism=Nannochloropsis oceanica|type=CDS|length=1455bp|location=Sequence derived from alignment at chr15:634..2088+ (Nannochloropsis oceanica)
ATGACAGGCAGCTGTCCTTATTGTGCCCTCGTGGAGCTGGCCGACGCGTA
TGTGAGGAGGAGGATGCTGCCGCAGCAGCATGAATTACAACCAGGGCAGA
AATGCAATTTTCGTCAGCCCGACACGCTCACCCTTTACCATCATCTGGCC
CGTCTCCTTGCCCAAGGCTACCACCGCGCCTCGTTTTCCCAACTGAACCC
GGCCACGCATTTTCCTTCCTTGACCTTCGTCTCCTCTACTCCTCCGCTCC
TAGCTGGCTGGCGCTCTCAGCTGCACCAATCCCTGCATCGCGCTCTAGTC
TTGCCTCGCTCATCGAGCAGGGGAGAGGACGGTGGAGACAACGATAGAGA
GGACGAGGAAATAATGGGCTCGTTTTGGAATGCTCTAGCTCCACCTCAGC
ACCGCCATCGTCCTCAGTTTAAGCAGCGCCAGCACAACGCGCGTGGAGGT
GGGGACCATCGCAGCATACGAGACGGCGACGACGCCCTTTCGCAGTGGTC
CTGCAAGGCAGCAGTAGCTTCTGGGTTATGCAATGAGGTGTGCCGCGCGC
TTCTCGCCCTGCAACAATCTCAGCAGTCGCAAGTAGTGGCTCAGCGGGTG
CTTGGTCTCATTTTGATGCATGTCGCGGCTGGCCGCGGGGATGCGCGAGC
AGGAAGGCATGGGAAAGCGGAAGGGGGGGAAGGGGAGAAGGAGAAGAAAA
GAAACGGCCTTGAAGTGGAGGCTCTGATGATAGGCAAGGGCAGCCGGAGG
GTGCCCTCATCCACTCTCCTTTCCTTCTCTACCCCCTTGCTTGTTGCCCT
CCGGACCTCTCTTACCCTGGGACCCGCCCTGTCACCCGCCCAGCTTGATA
TCACCATCCGCCCGTGCTACTTCGTCTCGGCTGCTTCCAATCGCTGTCGT
CCTCCACCCCCCGTACTTTCCCCCGCCGCGGCCGCCCGCCTGGTTGCCGT
CGCCCGTGAACTCCCCCAGCAGCTGTCGGTCCCCTTTCTGGTGGCTTTGT
TGCGTGCGTTGAGGCACGAGGAGGAAAACCTCAAAGAGAAGGGTGAAGGA
GGGAGTATTAAGAGTGAAGTCCTGGAAGGAGAGGAAACAGAACGAGAAGG
GAGAGGGGAGAGGGCAAGAAATGGGAGCCAGGGTGCGGAACTGGCAGAGA
CCGGGTCAAATTTCAATGTCGCAGAGCAGCTGCAGGCCCGACCTCATTTT
ACGCGAACGGTAGCAACCCCACATCGTCCATTATCACTGCCGTCACCACC
ACCGCCAGCAGCAGGAGCAACAGTGGCAGTTGCCTATTTCCCCCTTGACC
AAGTTCTCCAACTCTTCCTCGGCTGTCTCCACGACATTTTCCTCCGCAGC
CCGACACACGTGCAAGACGCCCTTGCCTCTGCCTTGCAGCCAACAGCGGC
TACGCTCTCACCGGGGTTTCCTTCCGCCCGCCCTCGTTCGTGGGTTTCCT
ACTAG
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Synonyms
Publications