NO14G03220.1, NO14G03220.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G03220.1
Unique NameNO14G03220.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length883
Alignment locationchr14:964307..965189 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:964307..965189 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G03220.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G03220NO14G03220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G03220.1NO14G03220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G03220.1.cds1NO14G03220.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G03220.1 ID=NO14G03220.1|Name=NO14G03220.1|organism=Nannochloropsis oceanica|type=mRNA|length=883bp
CCTGTACCCCCCACAGACAGCACAGCAACACCATGTCTACTAGCTCTCCC
TCAACGCCCGCCCTACTTGTCCCTTCTGGCATAGTCATCACATCTTCTTC
TACCGCCTCCTCCTCCTCCTCCTATTCCTCTTCGTCCTCCACCACCGCCT
ACCGCTTGAGCCCCATCCCCACTTTTGCCGCCCCCTCCTATTCTCCTTCC
CTCTCATCCTTTTCCTTCCCTCTTCCCACCACATCCACATCTAGCAGGTG
TTCTTTTCCATCCCGGCACCAGTTATCAGACCTTATCACTCAAGAGCATG
AGGTGGAAGAGGAGGAGGATCTAACCTATTCGTCGCGGCACCGGTGCCCA
TCCTCCGACTTGCTTTTGGCCAAATGCTGCCGTATCAGGGGGAGGATAGA
TTTCCACGTGGAAGAGTACGTTGATATTGGCGGTGGGGTGGTGGACAGGG
GAAGCGAGGGCGAGGAGGAGGGAGGAAATATGTTAGGAGCCGTGGCTATT
TCTGCCCTGACCTTCCTCCCTCCCTCTGTCCCCCCCCTTGCTGTCGTTGA
GGCCGATGATGGCATTCTTTGTGACCCGAGAGAGTGGTTCTCGATGCCTG
GACTCGCGACAAGCCCTGCTGATGAAGGAAATTCGAGACAAGGTCAGGAG
GGAGGAAGGGATCGAAGGAAAGGGAGGAAGCGAGCGAGAAGGTGACTTGT
GAGCGCTGCCTGCACGACAGCTGTGCCACCAGGGCTTCGCGCGATTATTT
GTCTTAATTCGATGCGCGACTCAACAACGTATCTCACCTACTCGCCCTCC
CTCTTGCCCTCCTGCCCTCCTGTTCTTCCTCCCTTCCCCAAGTCGTCACG
CAACCCCCACTTGGACACCCTCCCCGACGAAAG
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protein sequence of NO14G03220.1

>NO14G03220.1-protein ID=NO14G03220.1-protein|Name=NO14G03220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bp
MSTSSPSTPALLVPSGIVITSSSTASSSSSYSSSSSTTAYRLSPIPTFAA
PSYSPSLSSFSFPLPTTSTSSRCSFPSRHQLSDLITQEHEVEEEEDLTYS
SRHRCPSSDLLLAKCCRIRGRIDFHVEEYVDIGGGVVDRGSEGEEEGGNM
LGAVAISALTFLPPSVPPLAVVEADDGILCDPREWFSMPGLATSPADEGN
SRQGQEGGRDRRKGRKRARR*
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mRNA from alignment at chr14:964307..965189-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G03220.1 ID=NO14G03220.1|Name=NO14G03220.1|organism=Nannochloropsis oceanica|type=mRNA|length=883bp|location=Sequence derived from alignment at chr14:964307..965189- (Nannochloropsis oceanica)
CCTGTACCCCCCACAGACAGCACAGCAACACCATGTCTACTAGCTCTCCC
TCAACGCCCGCCCTACTTGTCCCTTCTGGCATAGTCATCACATCTTCTTC
TACCGCCTCCTCCTCCTCCTCCTATTCCTCTTCGTCCTCCACCACCGCCT
ACCGCTTGAGCCCCATCCCCACTTTTGCCGCCCCCTCCTATTCTCCTTCC
CTCTCATCCTTTTCCTTCCCTCTTCCCACCACATCCACATCTAGCAGGTG
TTCTTTTCCATCCCGGCACCAGTTATCAGACCTTATCACTCAAGAGCATG
AGGTGGAAGAGGAGGAGGATCTAACCTATTCGTCGCGGCACCGGTGCCCA
TCCTCCGACTTGCTTTTGGCCAAATGCTGCCGTATCAGGGGGAGGATAGA
TTTCCACGTGGAAGAGTACGTTGATATTGGCGGTGGGGTGGTGGACAGGG
GAAGCGAGGGCGAGGAGGAGGGAGGAAATATGTTAGGAGCCGTGGCTATT
TCTGCCCTGACCTTCCTCCCTCCCTCTGTCCCCCCCCTTGCTGTCGTTGA
GGCCGATGATGGCATTCTTTGTGACCCGAGAGAGTGGTTCTCGATGCCTG
GACTCGCGACAAGCCCTGCTGATGAAGGAAATTCGAGACAAGGTCAGGAG
GGAGGAAGGGATCGAAGGAAAGGGAGGAAGCGAGCGAGAAGGTGACTTGT
GAGCGCTGCCTGCACGACAGCTGTGCCACCAGGGCTTCGCGCGATTATTT
GTCTTAATTCGATGCGCGACTCAACAACGTATCTCACCTACTCGCCCTCC
CTCTTGCCCTCCTGCCCTCCTGTTCTTCCTCCCTTCCCCAAGTCGTCACG
CAACCCCCACTTGGACACCCTCCCCGACGAAAG
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Coding sequence (CDS) from alignment at chr14:964307..965189-

>NO14G03220.1 ID=NO14G03220.1|Name=NO14G03220.1|organism=Nannochloropsis oceanica|type=CDS|length=663bp|location=Sequence derived from alignment at chr14:964307..965189- (Nannochloropsis oceanica)
ATGTCTACTAGCTCTCCCTCAACGCCCGCCCTACTTGTCCCTTCTGGCAT
AGTCATCACATCTTCTTCTACCGCCTCCTCCTCCTCCTCCTATTCCTCTT
CGTCCTCCACCACCGCCTACCGCTTGAGCCCCATCCCCACTTTTGCCGCC
CCCTCCTATTCTCCTTCCCTCTCATCCTTTTCCTTCCCTCTTCCCACCAC
ATCCACATCTAGCAGGTGTTCTTTTCCATCCCGGCACCAGTTATCAGACC
TTATCACTCAAGAGCATGAGGTGGAAGAGGAGGAGGATCTAACCTATTCG
TCGCGGCACCGGTGCCCATCCTCCGACTTGCTTTTGGCCAAATGCTGCCG
TATCAGGGGGAGGATAGATTTCCACGTGGAAGAGTACGTTGATATTGGCG
GTGGGGTGGTGGACAGGGGAAGCGAGGGCGAGGAGGAGGGAGGAAATATG
TTAGGAGCCGTGGCTATTTCTGCCCTGACCTTCCTCCCTCCCTCTGTCCC
CCCCCTTGCTGTCGTTGAGGCCGATGATGGCATTCTTTGTGACCCGAGAG
AGTGGTTCTCGATGCCTGGACTCGCGACAAGCCCTGCTGATGAAGGAAAT
TCGAGACAAGGTCAGGAGGGAGGAAGGGATCGAAGGAAAGGGAGGAAGCG
AGCGAGAAGGTGA
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Synonyms
Publications