NO14G03150.1, NO14G03150.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G03150.1
Unique NameNO14G03150.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2108
Alignment locationchr14:939335..942702 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:939335..942702 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
[Close]
BLAST of NO14G03150.1 vs.
Match: EWM21085.1 (thioesterase [Nannochloropsis gaditana])

HSP 1 Score: 203.0 bits (515), Expect = 2.300e-48
Identity = 124/287 (43.21%), Postives = 168/287 (58.54%), Query Frame = 0 
Query:  188 TSSTFTSLSLPSPPSSSSSSSSSSSIDRHHHLRPASQALLKTLSHHLIHQPILTKDIHAAQKWFVCPFPKPEANYRLLCLAWAGGNSSLYEKWKVEG-CEVVAVELPGRNGRIKETPVKDLMQLVSKIVGAMEVLEYTTE---------------KPLLIFGHSFGAMQALEIARLLRHR----GHALPRCLFL-SGCPPSDAGWGDTGVSSKTDEGIGKYLTWLGGLTPELAGNMEIMKKILPAIRGDYTAIDSYKHQWADPLLLRVVALTGEKDEAANRDTMYGW 454
            T++T T+ S P+PPS+++   S S         PA +         LI  P+    +  A++WFVC  P+PEA YR+LCLAWAGGNSS+Y  W +    EVVAVELPGRN R+KETP+K+   LVS+++ AMEV+ Y                  KPLL+FGHSFGAM    +A+ LR R    G ++   L L SG  P D   G TGVS+ +D+ + +YL  +GG+  E+A + E+M   LPA RGDYTAID+Y +     L  R+VA  GE D  A+++ M GW
Sbjct:   18 TAATVTA-SAPAPPSANTGCHSGSK-------PPAGK---------LIQAPM---PLSEAKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTWDLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGW 284
The following BLAST results are available for this feature:
BLAST of NO14G03150.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21085.12.300e-4843.21thioesterase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G03150NO14G03150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G03150.1NO14G03150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G03150.1.cds1NO14G03150.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03150.1.cds2NO14G03150.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03150.1.cds3NO14G03150.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03150.1.cds4NO14G03150.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03150.1.cds5NO14G03150.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03150.1.cds6NO14G03150.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03150.1.cds7NO14G03150.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G03150.1.cds8NO14G03150.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G03150.1 ID=NO14G03150.1|Name=NO14G03150.1|organism=Nannochloropsis oceanica|type=mRNA|length=2108bp
ATGGGCTGTTGCGGGAGTAAGCTGCACCCCTCCGCCCACCATGCTGCGCG
TAGCACTTCTGGGGGTCCGGCACCACCGCCATCTGCCTCTCTCACCCCCG
ACAAATTCCGCGCCTGTTTTGTGGGCCTTTCTTACTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCACCACCACCACAACCACGACCGCTGCCACCCTCCC
CCTGCGCTTCCGATTCGTCATCCTGTCCGGCTGCCCCTGCCCCTCCGTCC
CCATCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAGTCTATCCCACCCGC
CTTTCCTCCCTCCCCCTTCCCAAACTCCTCTCCTTCCTCGTCTCCACCGG
TGCCCTCTCGGCCCATGTGGCTCAAAATAAAGAGACCGTCAAGAGCCTCC
TTCCCCTCTTCAAAGCAGACCTCGCCGCCGTCGATGCCTACATGCTCCAA
CCAAACACCTCATGGTCTCCCTCCCTCCTCCTACCCTGCCCTCTTCTGGT
CCTGTCCACCGAAGGGGATACGCTGGCTCCCCCTTCGGCCATGGAGGGAT
GGAAGGCCTATACGTCCTCCACATTCACTTCGCTCTCCCTCCCCTCCCCT
CCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCATCGACCGACACCA
TCACCTGCGGCCCGCGTCGCAGGCCTTACTCAAAACCCTTTCCCACCACC
TCATCCACCAGCCCATCCTCACCAAAGACATACACGCAGCCCAGAAGTGG
TTTGTCTGCCCCTTCCCGAAGCCCGAGGCTAATTATCGCCTGTTGTGCTT
GGCCTGGGCAGGGGGGAACAGCTCTCTGTACGAGAAATGGAAGGTGGAGG
GCTGCGAGGTAGTTGCCGTTGAGCTCCCTGGACGAAACGGTCGAATCAAA
GAAACGCCTGTGAAGGATTTGATGCAACTTGTGAGCAAGATCGTGGGGGC
AATGGAGGTTCTGGAGTACACGACTGAGAAGCCTCTCCTCATTTTCGGAC
ATTCGTTCGGGGCAATGCAGGCGCTGGAGATCGCCCGCCTCCTCCGCCAC
CGCGGACATGCGCTCCCTCGCTGCCTCTTCCTCTCGGGCTGCCCTCCGTC
CGACGCCGGGTGGGGCGACACGGGCGTGTCTAGCAAAACAGACGAGGGGA
TTGGAAAATACCTGACATGGCTTGGAGGACTCACGCCGGAGCTGGCGGGC
AACATGGAGATCATGAAGAAGATACTTCCGGCCATTCGCGGGGACTACAC
GGCCATCGACAGCTACAAGCACCAGTGGGCCGATCCCCTCCTCCTTCGGG
TCGTGGCCCTCACCGGCGAGAAGGACGAGGCAGCGAATCGGGACACAATG
TACGGATGGCGTCACTTTGTTGCCTGCTGCGAGGAGGAGGAAGCGATGGA
GGGAGGGATGGAGGGAGGGATGGAGGGAGGGCTGGGAGGGGCGCCGAAGG
TGTATGTACTGAAGAAGAAGGGAAAGTACAAGTGTAGGAGGGAGGAGGGA
GGGGGGGAGGGAGGGGGGAAGGAGGGGGGGAGGGAGGGGGGAAGGAGAGT
GCTTGTTCCGGCAGGTGGTGCTACCTGGGACGCACTTTTTTATCAAGGAT
AGACCGGAGGCCGTGTGGGAGGTGATTGAGGAGGAGATACAGAGAATACG
GAGAAGGGGGGGTAGTAGGGAGGGAGGGAGGGAGAGGGGGTGAGGGAGGG
GAACCAAAGGAGGACACATTTTGAGACGGCGGGATGCGTGGTGGTTCCTC
CCTGGAAAAAGTGCGCGAAAAAAGAAATCCTGGGGAAGCGTTTCCTGGCC
ACTGAAGAAGAAGCACGTTGGCTCAATGGAGATCTTCTTTGCTTCTCATT
TATAAATTTTGAAGGCGTATCGTATATCATATCATATCCGATTTTATCAA
CACGTCGTCCAACCGTATCATATCCCGCCATCTCATTAAATCATATCCCA
TCATCTAAACATCATGATATTCATGATAATATCACCATATCATTACCCTA
TCTCATCTCCACCTTCAGCTCTCTTCCCTTCTCTGTCAGGGAGCATGCCG
CGCTGAAGCTTGCACTCCTCCGACATCACACCCCTCCCTCCCTCCCTCCC
TCCATCCC
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protein sequence of NO14G03150.1

>NO14G03150.1-protein ID=NO14G03150.1-protein|Name=NO14G03150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=534bp
MGCCGSKLHPSAHHAARSTSGGPAPPPSASLTPDKFRACFVGLSYSSSSS
SSSSSTTTTTTTAATLPLRFRFVILSGCPCPSVPISSSSSSSSSSVYPTR
LSSLPLPKLLSFLVSTGALSAHVAQNKETVKSLLPLFKADLAAVDAYMLQ
PNTSWSPSLLLPCPLLVLSTEGDTLAPPSAMEGWKAYTSSTFTSLSLPSP
PSSSSSSSSSSSIDRHHHLRPASQALLKTLSHHLIHQPILTKDIHAAQKW
FVCPFPKPEANYRLLCLAWAGGNSSLYEKWKVEGCEVVAVELPGRNGRIK
ETPVKDLMQLVSKIVGAMEVLEYTTEKPLLIFGHSFGAMQALEIARLLRH
RGHALPRCLFLSGCPPSDAGWGDTGVSSKTDEGIGKYLTWLGGLTPELAG
NMEIMKKILPAIRGDYTAIDSYKHQWADPLLLRVVALTGEKDEAANRDTM
YGWRHFVACCEEEEAMEGGMEGGMEGGLGGAPKVYVLKKKGKYKCRREEG
GGEGGGKEGGREGGRRVLVPAGGATWDALFYQG*
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mRNA from alignment at chr14:939335..942702+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G03150.1 ID=NO14G03150.1|Name=NO14G03150.1|organism=Nannochloropsis oceanica|type=mRNA|length=3368bp|location=Sequence derived from alignment at chr14:939335..942702+ (Nannochloropsis oceanica)
ATGGGCTGTTGCGGGAGTAAGCTGCACCCCTCCGCCCACCATGCTGCGCG
TAGCACTTCTGGGGGTCCGGCACCACCGCCATCTGCCTCTCTCACCCCCG
ACAAATTCCGCGCCTGTTTTGTGGGCCTTTCTTACTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCACCACCACCACAACCACGACCGCTGCCACCCTCCC
CCTGCGCTTCCGATTGTACCGGCTTCCATGGGAAGGGACGAGCAGCATTG
TCTTTGACGCTTGGAATCAGCTGCCCTACGTGAAAGTCATCACCCTGGAA
CTGCCTGCAAGACTGGGAAGGGCGAAGGAAAAACACCCGCAGGAAATTCA
AAAGGTAGCCAGACACTTGGCTCAAGCTATTAGTATTCATGAAGGAAAAG
GAGGAGGAGGAGGAGGAAGAGGAGGAACCAGGGGGGGGGGGCATCCACTC
ATGCTTCCCTCCCATTCGCCCTCTTTGGACACAGCTACCTGGCTGGCCTT
CTCGCGATGGAAATTGCGCTTGCCCTCGTTCACACTCACCACCTCCCTCC
CCACAGCGTCATCCTGTCCGGCTGCCCCTGCCCCTCCGTCCCCATCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCAGTCTATCCCACCCGCCTTTCCTCC
CTCCCCCTTCCCAAACTCCTCTCCTTCCTCGTCTCCACCGGTGCCCTCTC
GGCCCATGTGGCTCAAAATAAAGAGACCGTCAAGAGCCTCCTTCCCCTCT
TCAAAGCAGACCTCGCCGCCGTCGATGCCTACATGCTCCAACCAAACACC
TCATGGTCTCCCTCCCTCCTCCTACCCTGCCCTCTTCTGGTCCTGTCCAC
CGAAGGGGATACGCTGGCTCCCCCTTCGGCCATGGAGGGATGGAAGGCCT
ATACGTCCTCCACATTCACTTCGCTCTCCCTCCCCTCCCCTCCTTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCATCGACCGACACCATCACCTGCG
GCCCGCGTCGCAGGCCTTACTCAAAACCCTTTCCCACCACCTCATCCACC
AGCCCATCCTCACCAAAGACATACACGTAAGCTTCCTCCTCTCCTCCTCC
TCCTCAATGCCCTTGATATGCATCTTTCCTCCCTCCCTCCCTTCCTCCCT
CCCTCCCTCCCGTCCTCCCCCAACTCCCTTCGGTGTACGTCATTCCTCTC
CTTGCTTCCCTCCCTCCCTCCCCCTCTCCCTTCCTCCCTTTCTTCCTTCC
TCCAGGCAGCCCAGAAGTGGTTTGTCTGCCCCTTCCCGAAGCCCGAGGCT
AATTATCGCCTGTTGTGCTTGGCCTGGGCAGGGGGGAACAGCTCTCTGTA
CGAGAAATGGAAGGTGGAGGGCTGCGAGGTAGGGAGGCAAGGAGGAAAGG
GAGGAGGGAGGGGGGGAGGGAAGGAGGGAAAGAGGGAGGGAGGACGGGGG
AACTCTCGTGAAGGCATCATGAAGACCGCTGTTCACTGTGCCCCTCCCTC
CCTCCCTCCCTCCCTCCTTCCCTCTCCTCAGGTAGTTGCCGTTGAGCTCC
CTGGACGAAACGGTCGAATCAAAGAAACGCCTGTGAAGGATTTGATGCAA
CTTGTGAGCAAGATCGTGGGGGCAATGGAGGTAGGTAAGTAGAAAGAGAG
GGAGGGAGGGAGGGAGGGAGGGAGCAGGGTGTCCAATGTTTATCCTGTGG
TCGATGTACATCCATTCCTCTTTCCCTCCCTCCTTCCCTCCCTCCCTCCC
TCCCTCCTTGCCTAGGTTCTGGAGTACACGACTGAGAAGCCTCTCCTCAT
TTTCGGACATTCGTTCGGGGCAATGCAGGCGCTGGAGGTGAGGGAGAGAG
GGAGGGAGGGAGGGAGGGAGACCATGAGTTGAAAGGAGAGTATCGCTTAG
CTTTTCGTTTTCTTTCCCTCCCTCACCCTTCCTCCCTCCTTCCCTCCTTC
CCTCCCTCCCTTTTTCCCTCCCTCTGTAGATCGCCCGCCTCCTCCGCCAC
CGCGGACATGCGCTCCCTCGCTGCCTCTTCCTCTCGGGCTGCCCTCCGTC
CGACGCCGGGTGGGGCGACACGGGCGTGTCTAGCAAAACAGACGAGGGGA
TTGGAAAATACCTGACATGGCTTGGAGGTAGGCAGGCAGGGAGGGAGGGA
GGGAGGGAGGGGGCGAGGTTTGAGTGGATGGGTGAGTGAGTGAGTGAGAG
GGGAAGGGAGGGATGGATTATCTGTTTTTCTCGTTTTTATCGCTTCACTA
CTCATTCCTCCCCACCTCCCTCCCTCCCTCCCTCATTCTCACTGTAGGAC
TCACGCCGGAGCTGGCGGGCAACATGGAGATCATGAAGAAGATACTTCCG
GGTAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGAGAG
GGCAGGCCAGTAAAGAGGGCACGAATTCATCGCACCCCTCCCTTTATCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTTCTACAGCCATTCGCG
GGGACTACACGGCCATCGACAGCTACAAGCACCAGTGGGCCGATCCCCTC
CTCCTTCGGGTCGTGGCCCTCACCGGCGAGAAGGACGAGGCAGCGAATCG
GGACACAATGTACGGATGGCGTCACTTTGTTGCCTGCTGCGAGGAGGAGG
AAGCGATGGAGGGAGGGATGGAGGGAGGGATGGAGGGAGGGCTGGGAGGG
GCGCCGAAGGTGTATGTACTGAAGAAGAAGGGAAAGTACAAGTGTAGGAG
GGAGGAGGGAGGGGGGGAGGGAGGGGGGAAGGAGGGGGGGAGGGAGGGGG
GAAGGAGAGTGCTTGTTCCGGCAGGTGGTGCTACCTGGGACGCACTTTTT
TATCAAGGATAGACCGGAGGCCGTGTGGGAGGTGATTGAGGAGGAGATAC
AGAGAATACGGAGAAGGGGGGGTAGTAGGGAGGGAGGGAGGGAGAGGGGG
TGAGGGAGGGGAACCAAAGGAGGACACATTTTGAGACGGCGGGATGCGTG
GTGGTTCCTCCCTGGAAAAAGTGCGCGAAAAAAGAAATCCTGGGGAAGCG
TTTCCTGGCCACTGAAGAAGAAGCACGTTGGCTCAATGGAGATCTTCTTT
GCTTCTCATTTATAAATTTTGAAGGCGTATCGTATATCATATCATATCCG
ATTTTATCAACACGTCGTCCAACCGTATCATATCCCGCCATCTCATTAAA
TCATATCCCATCATCTAAACATCATGATATTCATGATAATATCACCATAT
CATTACCCTATCTCATCTCCACCTTCAGCTCTCTTCCCTTCTCTGTCAGG
GAGCATGCCGCGCTGAAGCTTGCACTCCTCCGACATCACACCCCTCCCTC
CCTCCCTCCCTCCATCCC
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Coding sequence (CDS) from alignment at chr14:939335..942702+

>NO14G03150.1 ID=NO14G03150.1|Name=NO14G03150.1|organism=Nannochloropsis oceanica|type=CDS|length=1602bp|location=Sequence derived from alignment at chr14:939335..942702+ (Nannochloropsis oceanica)
ATGGGCTGTTGCGGGAGTAAGCTGCACCCCTCCGCCCACCATGCTGCGCG
TAGCACTTCTGGGGGTCCGGCACCACCGCCATCTGCCTCTCTCACCCCCG
ACAAATTCCGCGCCTGTTTTGTGGGCCTTTCTTACTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCACCACCACCACAACCACGACCGCTGCCACCCTCCC
CCTGCGCTTCCGATTCGTCATCCTGTCCGGCTGCCCCTGCCCCTCCGTCC
CCATCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAGTCTATCCCACCCGC
CTTTCCTCCCTCCCCCTTCCCAAACTCCTCTCCTTCCTCGTCTCCACCGG
TGCCCTCTCGGCCCATGTGGCTCAAAATAAAGAGACCGTCAAGAGCCTCC
TTCCCCTCTTCAAAGCAGACCTCGCCGCCGTCGATGCCTACATGCTCCAA
CCAAACACCTCATGGTCTCCCTCCCTCCTCCTACCCTGCCCTCTTCTGGT
CCTGTCCACCGAAGGGGATACGCTGGCTCCCCCTTCGGCCATGGAGGGAT
GGAAGGCCTATACGTCCTCCACATTCACTTCGCTCTCCCTCCCCTCCCCT
CCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCATCGACCGACACCA
TCACCTGCGGCCCGCGTCGCAGGCCTTACTCAAAACCCTTTCCCACCACC
TCATCCACCAGCCCATCCTCACCAAAGACATACACGCAGCCCAGAAGTGG
TTTGTCTGCCCCTTCCCGAAGCCCGAGGCTAATTATCGCCTGTTGTGCTT
GGCCTGGGCAGGGGGGAACAGCTCTCTGTACGAGAAATGGAAGGTGGAGG
GCTGCGAGGTAGTTGCCGTTGAGCTCCCTGGACGAAACGGTCGAATCAAA
GAAACGCCTGTGAAGGATTTGATGCAACTTGTGAGCAAGATCGTGGGGGC
AATGGAGGTTCTGGAGTACACGACTGAGAAGCCTCTCCTCATTTTCGGAC
ATTCGTTCGGGGCAATGCAGGCGCTGGAGATCGCCCGCCTCCTCCGCCAC
CGCGGACATGCGCTCCCTCGCTGCCTCTTCCTCTCGGGCTGCCCTCCGTC
CGACGCCGGGTGGGGCGACACGGGCGTGTCTAGCAAAACAGACGAGGGGA
TTGGAAAATACCTGACATGGCTTGGAGGACTCACGCCGGAGCTGGCGGGC
AACATGGAGATCATGAAGAAGATACTTCCGGCCATTCGCGGGGACTACAC
GGCCATCGACAGCTACAAGCACCAGTGGGCCGATCCCCTCCTCCTTCGGG
TCGTGGCCCTCACCGGCGAGAAGGACGAGGCAGCGAATCGGGACACAATG
TACGGATGGCGTCACTTTGTTGCCTGCTGCGAGGAGGAGGAAGCGATGGA
GGGAGGGATGGAGGGAGGGATGGAGGGAGGGCTGGGAGGGGCGCCGAAGG
TGTATGTACTGAAGAAGAAGGGAAAGTACAAGTGTAGGAGGGAGGAGGGA
GGGGGGGAGGGAGGGGGGAAGGAGGGGGGGAGGGAGGGGGGAAGGAGAGT
GCTTGTTCCGGCAGGTGGTGCTACCTGGGACGCACTTTTTTATCAAGGAT
AG
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Synonyms
Publications