NO14G03100.1, NO14G03100.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G03100.1
Unique Name	NO14G03100.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4257
Alignment location	chr14:921016..926781 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:921016..926781 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO14G03100.1 vs.
Match: CBN77964.1 (MEKK and related serine/threonine protein kinases [Ectocarpus siliculosus])

HSP 1 Score: 226.9 bits (577), Expect = 2.300e-55
Identity = 159/401 (39.65%), Postives = 221/401 (55.11%), Query Frame = 0

Query:    4 EIGLTRSLSHLHIVRYLGTHQCGNNLNILLEYCPRGSLRQMLQNDGALSEQQTSVYTRQILMGLRYLHENGIAHRDVKGANVLVSAEGTMKLADFGASKRLGHDSVISGLKGTPHWMAPEIIKGAQTSQGWKKADVWSMGCTVVEMLTGRSPWPDHPNPIAAMYQIANGHCPPIARSDVSPLAREFVSWCCTKDPTQRPTIEELLQHPFVGVV--AEAEHALPPSL-PPSLPSSLFLDRMGEAEEEEE----EGEEGREGRRGFYPSTSILELSSQLQRNLSPSSSSSSSSPSPSTSSSVKSSFSSSSSSLATATGLGSSSFNPFSRNISTETVDSGTEAS-CFNCPPSAAGPRIQQQQQYDKHLSHHQQQQPHDLRRTHSTPSSPSPSFPSSRQQGGNSS 397
            EIG+ R L H ++V +LG  + G +LNI LEY   GSLR+ L  +G + E+QT+V TR++L GL YLH N I HRD+KGANVL+S +G +KLADFG SK +  DSV+SGLKGTP+WMAPE+IK      GW +ADVWS+GCTVVEMLTG+ PWP+ PNP+ AM++I +G  PP+ R ++S  A  F++ C +  P +R T+E+L+ HPFV +     A  + PP   PPS P+    DR+      ++     G  G   RR     ++I +  + +    S + SS+SS   P      +   +S+++        G+    P  R  S ET  SG   S      PS  G       Q ++      QQQ   L R     +  +P  P      G SS
Sbjct:  126 EIGVLRRLRHPNVVSFLGVQRVGGHLNIFLEYMDGGSLRRRLDREGPMCERQTAVVTRKVLCGLAYLHSNNITHRDIKGANVLLSKKGAVKLADFGTSKPMDQDSVVSGLKGTPNWMAPEVIKNHLLPGGWLQADVWSVGCTVVEMLTGKMPWPNMPNPLCAMFKIVSGDKPPVNR-NISWGASSFMAACLSTKPPERYTVEQLMGHPFVVLTRSTRATASSPPQAPPPSSPNPYDDDRLDHHPRADDADRGAGVGGAGDRRHRRLYSNINKTGTSMDGGGSATFSSTSSYDHPHRHHRHRQEKASAAA--------GAEERRPPCR--SRETTSSGKRGSWSRETGPSCGGSGSGSSGQGEEGQGGRWQQQQQQLTRWLDGSNDRAPLPPPPTSGSGRSS 515

The following BLAST results are available for this feature:

BLAST of NO14G03100.1 vs.

BLAST of NO14G03100.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBN77964.1	2.300e-55	39.65	MEKK and related serine/threonine protein kinases ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO14G03100	NO14G03100	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO14G03100.1	NO14G03100.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO14G03100.1.cds1	NO14G03100.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G03100.1.cds2	NO14G03100.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G03100.1.cds3	NO14G03100.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G03100.1.cds4	NO14G03100.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G03100.1.cds5	NO14G03100.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G03100.1.cds6	NO14G03100.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G03100.1.cds7	NO14G03100.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G03100.1.cds8	NO14G03100.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G03100.1.cds9	NO14G03100.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr14:921016..926781-
coding sequence from alignment at chr14:921016..926781-

mRNA sequence

>NO14G03100.1 ID=NO14G03100.1|Name=NO14G03100.1|organism=Nannochloropsis oceanica|type=mRNA|length=4257bp
TCTATGCATAGTCTTTGACCCGAACACACGCACGTTTTCTTCTCCCCCTT
ATCCCTGAGTTGACATTGATGTTTCCATCCTCCAGAATGTCTTAATATCG
TCCTACGCTGTCACTTCCTCACGATGAAATTCTGCCTCGCCGATTACCTC
TGAATTAGACTTTTTGATTTCTGTGGGCACTCCTGTAGCTTTGCGTCCCG
CCCCAGTCGCTGCTGCGCGCGAGGACATGCGCTCCCAGAATCGAGAACTT
TACTTCATACTAACCATCGTCCTTCCCACACCACAGGATGCACCCCCTCC
AAACCGTGTCACCTGGCATGGGTGGGAGGAATGTTGGGTGCGGCGGCAGC
GGGGATGGCACTTGCGCATGTGGGTATTGGACGAAGCTCTCCCTTCTCGG
TCGCGGTGCCCACGGGTCGGTCTACTTGGCGCGTTTGGAAAAGACAGGTG
ATGAAGTGGCGATCAAGCAGGTAAAGAAGCCAGAACATAGGAGGGGGGAT
TCATCTTCAGATTCCCGACAAATGCTGCCGACCGACCTTGCACTCCCGTT
AGATTTCAACTCCATCATATCTATCCCTTTCAACGCTATCCTCCCCATCC
CTTCCCACAGGTGCTCGTGGATGATCGCACCGAACGTGACTTTGCAGGCG
CCATGGTCGAGGAGATCGGTTTGACTCGCTCCTTGTCTCACCTACACATC
GTTCGCTACCTGGGCACACACCAGTGTGGAAATAACCTCAACATTCTCCT
AGAATACTGTCCAAGAGGCTCCCTCCGCCAAATGTTGCAGAACGACGGTG
CCCTCTCTGAACAGCAGACATCTGTCTATACCCGTCAGATTCTAATGGGC
CTGCGGTACCTTCACGAGAACGGCATTGCCCATCGGGACGTGAAAGGAGC
TAATGTCTTGGTGTCGGCGGAAGGGACGATGAAGCTGGCGGATTTCGGGG
CCTCGAAACGGCTCGGACACGACTCGGTCATATCCGGGCTCAAGGGGACA
CCGCACTGGATGGCCCCGGAGATCATTAAGGGCGCACAAACCTCCCAGGG
CTGGAAGAAGGCCGATGTATGGAGCATGGGCTGTACCGTCGTGGAGATGC
TCACGGGCCGCTCGCCCTGGCCTGACCATCCCAACCCCATCGCGGCCATG
TACCAGATCGCCAACGGCCACTGCCCTCCCATCGCCCGCTCGGACGTGAG
TCCACTCGCGCGGGAGTTCGTTTCGTGGTGTTGCACTAAAGACCCCACGC
AGAGGCCTACCATCGAAGAGCTCCTCCAGCACCCTTTTGTTGGCGTCGTC
GCGGAGGCAGAGCACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGTC
CTCCCTCTTCCTCGACCGTATGGGGGAAGCGGAGGAGGAGGAAGAGGAGG
GGGAGGAAGGGAGGGAAGGAAGACGAGGGTTCTACCCCTCAACGTCGATC
CTGGAGCTCAGCTCGCAACTGCAGCGGAACCTCTCTCCTTCCTCCTCCTC
CTCATCTTCCTCCCCCTCCCCCTCCACGTCGTCTTCGGTCAAGTCCTCCT
TCTCCTCCTCCTCCTCCTCCCTCGCTACGGCCACTGGCCTCGGCTCCTCC
TCTTTCAACCCTTTTTCTAGGAACATCTCCACCGAGACCGTGGACTCAGG
CACAGAGGCGAGCTGCTTCAACTGTCCGCCATCAGCGGCAGGCCCACGCA
TCCAGCAGCAGCAGCAGTACGACAAACATCTCTCTCATCATCAGCAGCAG
CAGCCCCATGACCTTCGACGGACCCATAGCACGCCCTCCTCCCCCTCCCC
CTCGTTCCCTTCCTCGCGCCAGCAAGGCGGAAACAGCAGCAGCAGCAGCA
GTACGACAAACATCTCTCTCATCAGCAGCAGCAGCACGGAGCCCGCATGG
GGTGGGAGGGAGCGGGGGAGTGCATCTTTAATGGAAAGGAGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGGAGACAGCTCTCTCCCTCGTCGTCACCCA
TCTCTGCCTGCTTCCCGTCGAGGGAGTATGGAGGGCGGGAGGGAGGGAGG
GAAGGGTGGCTTGGTGCTGTTCATCTGCCTCTTCCTCTCTTACGGCGGGC
GCAGACCTCCACATGCGCGAGTGTGCGGAGAGACGCCTGGCACCAGCTGA
CTGGAGGGAGAGAGGGAAGAAGGGGAGAGCAGCAGCAGCAGCAGCAACAA
CAGGAGCCGGAGCAACAGCAGTACAACAAACATCTCTCTCATCAGCAGGA
GGAGCAGCAGCCACCGCTGCACTACCAGCACCAACAGCATCGCTGTTTCT
CCTGGGCCAGTGGAGCTGAAGGAGAGAGCAACAGCAACAGCAGCAGCAGC
AGTGTGCGCAGCCACTGTAGCAGCCACGCCACAACCACTACCAGCAGCAG
CAGCAGCCCCAATAGCAATTTCTTTTATCACACAATTAACACCAAAGGGA
ACCACGCCTCCTGCTCGTCCTCCCCCCCTCCCTCCCCCCCTTCCGCCTGC
ATGCGAGGCCGCAGCTTAAGCAGCAGCAGCTGCAACAGCAGCAGCAGCAA
CAACAACCACCACCACAACAACAGCCACGGCAACCACAGCAACAGCAAGA
GCCCTTCCTCCTCCTCGTCCTCCCCCTTGACCTCCCTCTTCTCCACCAGA
CTGCCTCCCCTTCGATCCCACTCCTCCCCCCCTCCCCCCTCCTCCTCCAG
TACGGAGGAGGTCAAACCCCACTATCACGAATTTTCCTTCCCTTCTTCCC
CCTCTCCCTCTTCCGCCTCCTCCTCCTCCTCCTCCTCTGTTTCCCCCCCT
CCCCCAGCCTACCATTCTCGGCGCTACGGGAAGCACTCCCCCTCCCTCCC
TCCTCCCCTCCCTCCCTCCCTCGGTCCCCACCAACAGCCCCAACTACAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCATGAGAAGA
AAAGGTGCTCTTTCCCATCGTCTGGAGCCGCTGCGTCTGAAGGATCATTC
GAATGCAGGGAGAGAGGGAGGGAGGGAGGGAGGGCGGGCGGCGGAGGGTT
CTCTTCGCCAATAGAGGGAATGTAGTGCGCTCCAGTTTCGCCGTCATAAA
GGATGTTGGGAAGGAGGAAGGGACAGAGGAAGTTCTAAAAAAAGCACTAA
CCGTGTATAGAATGGAGAAGAAAGATGAAGTGAAAGGCTACAATTGAGTG
CCAACAGCTCAAGGGAAGGATACAAGCGAGCGAAATGTGGAGAGAAATCA
AAATTCAAGACAGAAGGAGGATGGGAATACATTTTACACACAGACAGCCA
AAAACGAATCAATAAGGAAGAGCAGGAGAAACGATGAAACGGGACGAGAG
AGACGTCCAGAAAGAGAGAGAAAATGAGAGGGAGAAAACGAGAATCAGAC
AGCACGCTTTCCCCTCGCTCTCCATCTCTCTCCATATCGTACATCTATAT
ATCAGTATTATAAATCTATATATCTATATATCTATTATACATGATACCGA
TATAGATCGTGGTCAGTATGGAGACCTGTGACTCAGCCGACCCATCGATC
CACTGAGAGATTGAAAGAGAGAGAAAGAGACAAAGGAAAGGAGAGAAATG
AGAGAAAGCCGGGGCGAAGTCAACTTACAAGCCAGCTTTAAGAGAGAGGA
CAGGAAGAGAAAGGGAAAGTGTTTTTACATACAGGCAGCCAGACCAGTAC
CAGCGAGGAAGAGAAAGAAATGCACGAGGACATGAAGCCAGCAATTCACA
ACCAAAGGAGATTTAAGAATAAAAATAATGAAAGAAGAACAAGAGAGAGA
AATACGGAGAGTTTAAGAGGGAGAGATGGAGAGATGAATTGAGGGAAAGT
GAGAGAAAGAATGAGGATGAACGGTTTATACATGAGAAAAATCAAATCCC
AATACGAGAAATCTCTTTTTTAGAGAAGAAATGCTTAAAATCAAATTGGA
ACGACGGGGCAAAGACAAATTGCCACTGACCGAGAGCGAGAAACATCAAG
AGAATGAGGAAGTGAGGAAAAGAGGACGAGAGAGAGAGAAAGAAAGAGAA
GCAGAAGAAAGGGAAGAGACTGGCCGATTGGCATGTGCCTGCACCATTCA
AGACAAGAGAAATACATTCAAATCCCATGTGGACACACCAGAGCGAGAAA
TAGCAGCCACTGCCGCAGCAGCAGCAACAGCTACTACCCCACCAACAACA
ATGACAAGAAAAAGGATCAAAGCCACCGGTAATTAAATAACGATCAAAAC
GCAGATG

protein sequence of NO14G03100.1

>NO14G03100.1-protein ID=NO14G03100.1-protein|Name=NO14G03100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=804bp
MVEEIGLTRSLSHLHIVRYLGTHQCGNNLNILLEYCPRGSLRQMLQNDGA
LSEQQTSVYTRQILMGLRYLHENGIAHRDVKGANVLVSAEGTMKLADFGA
SKRLGHDSVISGLKGTPHWMAPEIIKGAQTSQGWKKADVWSMGCTVVEML
TGRSPWPDHPNPIAAMYQIANGHCPPIARSDVSPLAREFVSWCCTKDPTQ
RPTIEELLQHPFVGVVAEAEHALPPSLPPSLPSSLFLDRMGEAEEEEEEG
EEGREGRRGFYPSTSILELSSQLQRNLSPSSSSSSSSPSPSTSSSVKSSF
SSSSSSLATATGLGSSSFNPFSRNISTETVDSGTEASCFNCPPSAAGPRI
QQQQQYDKHLSHHQQQQPHDLRRTHSTPSSPSPSFPSSRQQGGNSSSSSS
TTNISLISSSSTEPAWGGRERGSASLMERRGGGGGGGGGGRQLSPSSSPI
SACFPSREYGGREGGREGWLGAVHLPLPLLRRAQTSTCASVRRDAWHQLT
GGREGRRGEQQQQQQQQEPEQQQYNKHLSHQQEEQQPPLHYQHQQHRCFS
WASGAEGESNSNSSSSSVRSHCSSHATTTTSSSSSPNSNFFYHTINTKGN
HASCSSSPPPSPPSACMRGRSLSSSSCNSSSSNNNHHHNNSHGNHSNSKS
PSSSSSSPLTSLFSTRLPPLRSHSSPPPPSSSSTEEVKPHYHEFSFPSSP
SPSSASSSSSSSVSPPPPAYHSRRYGKHSPSLPPPLPPSLGPHQQPQLQQ
QQQQQQQQQQQQRMRRKGALSHRLEPLRLKDHSNAGREGGREGGRAAEGS
LRQ*

mRNA from alignment at chr14:921016..926781-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO14G03100.1 ID=NO14G03100.1|Name=NO14G03100.1|organism=Nannochloropsis oceanica|type=mRNA|length=5766bp|location=Sequence derived from alignment at chr14:921016..926781- (Nannochloropsis oceanica)
TCTATGCATAGTCTTTGACCCGAACACACGCACGTTTTCTTCTCCCCCTT
ATCCCTGAGTTGACATTGATGTTTCCATCCTCCAGAATGTCTTAATATCG
TCCTACGCTGTCACTTCCTCACGATGAAATTCTGCCTCGCCGATTACCTC
TGAATTAGACTTTTTGATTTCTGTGGGCACTCCTGTAGCTTTGCGTCCCG
CCCCAGTCGCTGCTGCGCGCGAGGACATGCGCTCCCAGAATCGAGAACTT
TACTTCATACTAACCATCGTCCTTCCCACACCACAGGATGCACCCCCTCC
AAACCGTGTCACCTGGCATGGGTGGGAGGAATGTTGGGTGCGGCGGCAGC
GGGGATGGCACTTGCGCATGTGGGTATTGGACGAAGCTCTCCCTTCTCGG
TCGCGGTAAGTGCAGGAGACTGCTAGAACAAAGGCTGTGTCAAGCGGACA
ATGCGAGTGAACGACGACACTCGCTCACCACGCTCACCTCATTTGGTTGC
AACACATGACCACGACACACACAGGTGCCCACGGGTCGGTCTACTTGGCG
CGTTTGGAAAAGACAGGTGATGAAGTGGCGATCAAGCAGGTAAAGAAGCC
AGAACATAGGAGGGGGGATTCATCTTCAGATTCCCGACAAATGCTGCCGA
CCGACCTTGCACTCCCGTTAGATTTCAACTCCATCATATCTATCCCTTTC
AACGCTATCCTCCCCATCCCTTCCCACAGGTGCTCGTGGATGATCGCACC
GAACGTGACTTTGCAGGTATGTATGACCCACTCGACAGCCTTCCCGCCCT
CCCCCCCGCCCCCCCCCCGCCCTCCCTCCCCGTCCCCCTCCAGCTGAATG
ACCGCTGAGAAGACATCTACACCCACCATTCACACCCCTCCATCCCCTCC
GTCGCACACTACTTTCCTTCCTAAACCCAATCTAAACCTCCCCCTAAGCT
AAACCATGCCTCCCTTCCTTCCCCTCCCCCTCAGGCGCCATGGTCGAGGA
GATCGGTTTGACTCGCTCCTTGTCTCACCTACACATCGTTCGCTACCTGG
GCACACACCAGTGTGGAAATAACCTCAACATTCTCCTAGGTAAGGAGGGA
GGGAAGGAGGTAGGGAAGGAAGGAGGGAGGGAGGGAGGGAGGAGTGAAGT
GAGGGGTACGAGGAAGGGAGGGAAGTTGATTCACCTGATTGCTCACCATT
GTTTCCCTTTCTTTCATCCTTTCCTTCATCCACACCACCTTTATGGCTGT
GTCCTCGATATGATCGACCACAGAATACTGTCCAAGAGGCTCCCTCCGCC
AAATGTTGCAGAACGACGGTATGCACCCCTCCCTCCATCCCTCCCTCCCT
CCCTCTCGCCCGCCCCTCCACCCTTACCTCTCCTCACCTTTCCTCCTCCT
CCCTCCCCTCTCTCCTCAGGTGCCCTCTCTGAACAGCAGACATCTGTCTA
TACCCGTCAGATTCTAATGGGCCTGCGGTACCTTCACGAGAACGGCATTG
CCCATCGGTACGAGGGAGGGAGGGAGGGAGAGAGGGAGAGAGGGATAGAG
GGAGAAAAGGGAAAAAAAACAGGTCCAATCATATGTATGACCAACTCACC
CTTCCCTCCCTCCCTCCCCCTCGCCCTCGCCCTCGACCTCAGGGACGTGA
AAGGAGCTAATGTCTTGGTGTCGGCGGAAGGGACGATGAAGCTGGCGGAT
TTCGGGGCCTCGAAACGGCTCGGACACGACTCGGTCATATCCGGGCTCAA
GGTGAGGAGGCGGGAATGAGAGGGGGGGGAGGGAGGGAGGGAGGGGTACG
TGTTTTTGGTAACAGACATGCTTTTGTCAATCTAACGTGCATTTATGTAA
TGTAATCTGACACCTTACCTGCCTTGTGACATGCATTAACGTAACGTGAT
GCAATCTAATGTCTGGCATGTGCATTAACCAACGTTACAGGGGACACCGC
ACTGGATGGCCCCGGAGATCATTAAGGGCGCACAAACCTCCCAGGTACCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTAACAGTC
TAGACGCCATACACACACTCATCCTCCCTCCTCCCCCGCTCCCACTCGTC
TACCTCCAGGGCTGGAAGAAGGCCGATGTATGGAGCATGGGCTGTACCGT
CGTGGAGATGCTCACGGGCCGCTCGCCCTGGCCTGACCATCCCAACCCCA
TCGCGGCCATGTACGCAAGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTTTCCCTCCTCTCCATCGCTATTATCTGGCTGTT
ATCCCTCTCTTTCCCCTCACCATTCCTGCCTCCCCTCTCTTTCCTCCCTC
CCTCCCTCCGCGTCCTACCTCCTCTCCCTCCCTCCCTCCCTCCTTCAGGT
ACCAGATCGCCAACGGCCACTGCCCTCCCATCGCCCGCTCGGACGTGAGT
CCACTCGCGCGGGAGTTCGTTTCGTGGTGTTGCACTAAAGACCCCACGCA
GAGGTAGGGAGGGAAGGAGGAAGGGAGGGAGGGAAGGAGGAGATGGTCGA
TGATTAGGGACGTCTCACGTGTCCTTCCTTCCCTCCCTCCCTCCCGCCCT
CCCTCCAGGCCTACCATCGAAGAGCTCCTCCAGCACCCTTTTGTTGGCGT
CGTCGCGGAGGCAGAGCACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CGTCCTCCCTCTTCCTCGACCGTATGGGGGAAGCGGAGGAGGAGGAAGAG
GAGGGGGAGGAAGGGAGGGAAGGAAGACGAGGGTTCTACCCCTCAACGTC
GATCCTGGAGCTCAGCTCGCAACTGCAGCGGAACCTCTCTCCTTCCTCCT
CCTCCTCATCTTCCTCCCCCTCCCCCTCCACGTCGTCTTCGGTCAAGTCC
TCCTTCTCCTCCTCCTCCTCCTCCCTCGCTACGGCCACTGGCCTCGGCTC
CTCCTCTTTCAACCCTTTTTCTAGGAACATCTCCACCGAGACCGTGGACT
CAGGCACAGAGGTAGGGAGGAAGGGAGGGAGGGAAGGTGGGGGGAAGGAA
GCTCCAATACCATCACCGAGGCCGTGAACGCAGGCTCTGGGGTAGGGAAG
GAAAGAGGGAGGGAGTACGGAATGAAGAAGCTCGGATTTCTCACAGTTCT
CCTTCGCTCAACGCAGGCGAGCTGCTTCAACTGTCCGCCATCAGCGGCAG
GCCCACGCATCCAGCAGCAGCAGCAGTACGACAAACATCTCTCTCATCAT
CAGCAGCAGCAGCCCCATGACCTTCGACGGACCCATAGCACGCCCTCCTC
CCCCTCCCCCTCGTTCCCTTCCTCGCGCCAGCAAGGCGGAAACAGCAGCA
GCAGCAGCAGTACGACAAACATCTCTCTCATCAGCAGCAGCAGCACGGAG
CCCGCATGGGGTGGGAGGGAGCGGGGGAGTGCATCTTTAATGGAAAGGAG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGACAGCTCTCTCCCTCGT
CGTCACCCATCTCTGCCTGCTTCCCGTCGAGGGAGTATGGAGGGCGGGAG
GGAGGGAGGGAAGGGTGGCTTGGTGCTGTTCATCTGCCTCTTCCTCTCTT
ACGGCGGGCGCAGACCTCCACATGCGCGAGTGTGCGGAGAGACGCCTGGC
ACCAGCTGACTGGAGGGAGAGAGGGAAGAAGGGGAGAGCAGCAGCAGCAG
CAGCAACAACAGGAGCCGGAGCAACAGCAGTACAACAAACATCTCTCTCA
TCAGCAGGAGGAGCAGCAGCCACCGCTGCACTACCAGCACCAACAGCATC
GCTGTTTCTCCTGGGCCAGTGGAGCTGAAGGAGAGAGCAACAGCAACAGC
AGCAGCAGCAGTGTGCGCAGCCACTGTAGCAGCCACGCCACAACCACTAC
CAGCAGCAGCAGCAGCCCCAATAGCAATTTCTTTTATCACACAATTAACA
CCAAAGGGAACCACGCCTCCTGCTCGTCCTCCCCCCCTCCCTCCCCCCCT
TCCGCCTGCATGCGAGGCCGCAGCTTAAGCAGCAGCAGCTGCAACAGCAG
CAGCAGCAACAACAACCACCACCACAACAACAGCCACGGCAACCACAGCA
ACAGCAAGAGCCCTTCCTCCTCCTCGTCCTCCCCCTTGACCTCCCTCTTC
TCCACCAGACTGCCTCCCCTTCGATCCCACTCCTCCCCCCCTCCCCCCTC
CTCCTCCAGTACGGAGGAGGTCAAACCCCACTATCACGAATTTTCCTTCC
CTTCTTCCCCCTCTCCCTCTTCCGCCTCCTCCTCCTCCTCCTCCTCTGTT
TCCCCCCCTCCCCCAGCCTACCATTCTCGGCGCTACGGGAAGCACTCCCC
CTCCCTCCCTCCTCCCCTCCCTCCCTCCCTCGGTCCCCACCAACAGCCCC
AACTACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGC
ATGAGAAGAAAAGGTGCTCTTTCCCATCGTCTGGAGCCGCTGCGTCTGAA
GGATCATTCGAATGCAGGGAGAGAGGGAGGGAGGGAGGGAGGGCGGGCGG
CGGAGGGTTCTCTTCGCCAATAGAGGGAATGTAGTGCGCTCCAGTTTCGC
CGTCATAAAGGATGTTGGGAAGGAGGAAGGGACAGAGGAAGTTCTAAAAA
AAGCACTAACCGTGTATAGAATGGAGAAGAAAGATGAAGTGAAAGGCTAC
AATTGAGTGCCAACAGCTCAAGGGAAGGATACAAGCGAGCGAAATGTGGA
GAGAAATCAAAATTCAAGACAGAAGGAGGATGGGAATACATTTTACACAC
AGACAGCCAAAAACGAATCAATAAGGAAGAGCAGGAGAAACGATGAAACG
GGACGAGAGAGACGTCCAGAAAGAGAGAGAAAATGAGAGGGAGAAAACGA
GAATCAGACAGCACGCTTTCCCCTCGCTCTCCATCTCTCTCCATATCGTA
CATCTATATATCAGTATTATAAATCTATATATCTATATATCTATTATACA
TGATACCGATATAGATCGTGGTCAGTATGGAGACCTGTGACTCAGCCGAC
CCATCGATCCACTGAGAGATTGAAAGAGAGAGAAAGAGACAAAGGAAAGG
AGAGAAATGAGAGAAAGCCGGGGCGAAGTCAACTTACAAGCCAGCTTTAA
GAGAGAGGACAGGAAGAGAAAGGGAAAGTGTTTTTACATACAGGCAGCCA
GACCAGTACCAGCGAGGAAGAGAAAGAAATGCACGAGGACATGAAGCCAG
CAATTCACAACCAAAGGAGATTTAAGAATAAAAATAATGAAAGAAGAACA
AGAGAGAGAAATACGGAGAGTTTAAGAGGGAGAGATGGAGAGATGAATTG
AGGGAAAGTGAGAGAAAGAATGAGGATGAACGGTTTATACATGAGAAAAA
TCAAATCCCAATACGAGAAATCTCTTTTTTAGAGAAGAAATGCTTAAAAT
CAAATTGGAACGACGGGGCAAAGACAAATTGCCACTGACCGAGAGCGAGA
AACATCAAGAGAATGAGGAAGTGAGGAAAAGAGGACGAGAGAGAGAGAAA
GAAAGAGAAGCAGAAGAAAGGGAAGAGACTGGCCGATTGGCATGTGCCTG
CACCATTCAAGACAAGAGAAATACATTCAAATCCCATGTGGACACACCAG
AGCGAGAAATAGCAGCCACTGCCGCAGCAGCAGCAACAGCTACTACCCCA
CCAACAACAATGACAAGAAAAAGGATCAAAGCCACCGGTAATTAAATAAC
GATCAAAACGCAGATG

Coding sequence (CDS) from alignment at chr14:921016..926781-

>NO14G03100.1 ID=NO14G03100.1|Name=NO14G03100.1|organism=Nannochloropsis oceanica|type=CDS|length=2412bp|location=Sequence derived from alignment at chr14:921016..926781- (Nannochloropsis oceanica)
ATGGTCGAGGAGATCGGTTTGACTCGCTCCTTGTCTCACCTACACATCGT
TCGCTACCTGGGCACACACCAGTGTGGAAATAACCTCAACATTCTCCTAG
AATACTGTCCAAGAGGCTCCCTCCGCCAAATGTTGCAGAACGACGGTGCC
CTCTCTGAACAGCAGACATCTGTCTATACCCGTCAGATTCTAATGGGCCT
GCGGTACCTTCACGAGAACGGCATTGCCCATCGGGACGTGAAAGGAGCTA
ATGTCTTGGTGTCGGCGGAAGGGACGATGAAGCTGGCGGATTTCGGGGCC
TCGAAACGGCTCGGACACGACTCGGTCATATCCGGGCTCAAGGGGACACC
GCACTGGATGGCCCCGGAGATCATTAAGGGCGCACAAACCTCCCAGGGCT
GGAAGAAGGCCGATGTATGGAGCATGGGCTGTACCGTCGTGGAGATGCTC
ACGGGCCGCTCGCCCTGGCCTGACCATCCCAACCCCATCGCGGCCATGTA
CCAGATCGCCAACGGCCACTGCCCTCCCATCGCCCGCTCGGACGTGAGTC
CACTCGCGCGGGAGTTCGTTTCGTGGTGTTGCACTAAAGACCCCACGCAG
AGGCCTACCATCGAAGAGCTCCTCCAGCACCCTTTTGTTGGCGTCGTCGC
GGAGGCAGAGCACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGTCCT
CCCTCTTCCTCGACCGTATGGGGGAAGCGGAGGAGGAGGAAGAGGAGGGG
GAGGAAGGGAGGGAAGGAAGACGAGGGTTCTACCCCTCAACGTCGATCCT
GGAGCTCAGCTCGCAACTGCAGCGGAACCTCTCTCCTTCCTCCTCCTCCT
CATCTTCCTCCCCCTCCCCCTCCACGTCGTCTTCGGTCAAGTCCTCCTTC
TCCTCCTCCTCCTCCTCCCTCGCTACGGCCACTGGCCTCGGCTCCTCCTC
TTTCAACCCTTTTTCTAGGAACATCTCCACCGAGACCGTGGACTCAGGCA
CAGAGGCGAGCTGCTTCAACTGTCCGCCATCAGCGGCAGGCCCACGCATC
CAGCAGCAGCAGCAGTACGACAAACATCTCTCTCATCATCAGCAGCAGCA
GCCCCATGACCTTCGACGGACCCATAGCACGCCCTCCTCCCCCTCCCCCT
CGTTCCCTTCCTCGCGCCAGCAAGGCGGAAACAGCAGCAGCAGCAGCAGT
ACGACAAACATCTCTCTCATCAGCAGCAGCAGCACGGAGCCCGCATGGGG
TGGGAGGGAGCGGGGGAGTGCATCTTTAATGGAAAGGAGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGGAGACAGCTCTCTCCCTCGTCGTCACCCATC
TCTGCCTGCTTCCCGTCGAGGGAGTATGGAGGGCGGGAGGGAGGGAGGGA
AGGGTGGCTTGGTGCTGTTCATCTGCCTCTTCCTCTCTTACGGCGGGCGC
AGACCTCCACATGCGCGAGTGTGCGGAGAGACGCCTGGCACCAGCTGACT
GGAGGGAGAGAGGGAAGAAGGGGAGAGCAGCAGCAGCAGCAGCAACAACA
GGAGCCGGAGCAACAGCAGTACAACAAACATCTCTCTCATCAGCAGGAGG
AGCAGCAGCCACCGCTGCACTACCAGCACCAACAGCATCGCTGTTTCTCC
TGGGCCAGTGGAGCTGAAGGAGAGAGCAACAGCAACAGCAGCAGCAGCAG
TGTGCGCAGCCACTGTAGCAGCCACGCCACAACCACTACCAGCAGCAGCA
GCAGCCCCAATAGCAATTTCTTTTATCACACAATTAACACCAAAGGGAAC
CACGCCTCCTGCTCGTCCTCCCCCCCTCCCTCCCCCCCTTCCGCCTGCAT
GCGAGGCCGCAGCTTAAGCAGCAGCAGCTGCAACAGCAGCAGCAGCAACA
ACAACCACCACCACAACAACAGCCACGGCAACCACAGCAACAGCAAGAGC
CCTTCCTCCTCCTCGTCCTCCCCCTTGACCTCCCTCTTCTCCACCAGACT
GCCTCCCCTTCGATCCCACTCCTCCCCCCCTCCCCCCTCCTCCTCCAGTA
CGGAGGAGGTCAAACCCCACTATCACGAATTTTCCTTCCCTTCTTCCCCC
TCTCCCTCTTCCGCCTCCTCCTCCTCCTCCTCCTCTGTTTCCCCCCCTCC
CCCAGCCTACCATTCTCGGCGCTACGGGAAGCACTCCCCCTCCCTCCCTC
CTCCCCTCCCTCCCTCCCTCGGTCCCCACCAACAGCCCCAACTACAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCATGAGAAGAAA
AGGTGCTCTTTCCCATCGTCTGGAGCCGCTGCGTCTGAAGGATCATTCGA
ATGCAGGGAGAGAGGGAGGGAGGGAGGGAGGGCGGGCGGCGGAGGGTTCT
CTTCGCCAATAG

Synonyms

Publications