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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:741023..744646 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G02480.1 vs.
Match: EWM24556.1 (dolichyl-diphosphooligosaccharide-protein glycosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 695.3 bits (1793), Expect = 1.400e-196 Identity = 350/502 (69.72%), Postives = 404/502 (80.48%), Query Frame = 0
Query: 1 MVSTLPRRRGIGVFSLCCVLAMVVLPQPAQGSTYEVQGHVGGKRTLVLLDTFTTIETHSLFFSGLAGRGHELTYFLASSPDVLLSKYGEPLYDNLIFFAPGTSEFTSPSLDGAEGIVAFVEGGGNVLMAGEKGMSDLTREIAGEFGVEFEKKRSVVQDHFSYAPGLDVSGRHWAVVSDGLVRNEKVLGRDAGRKGGVSPVVFKGVGVTVESENVLAFPILTGASSTYSAVPNKEIISSTAASSFPMSLANAGKALGLIVAVQARNNARVIVSGSLDFFSDAFFEHQLEGTGGKKVGNELVAQEMSKWGLGERGILRATNVTHHRADGSNPEHLLATIEKPDLPFSLFPDPELNRQSLVYRIKDDIIYSLIIEEYDEEKGGWGPYQADDVQLEFVMLDPHVRTFLECEKGTGRFWKLFKVPDTYGVFKFRILYRRPGLSVLAVNTQVSVRPFNHDEYERFIFSAFPYYASAFSMMAGFLVFGVAFLYSKPKKAG-GGKSTKKE 502
M ST + L C L+ + L QGSTYE QG GGKRT+ LLD+ ++THS+FF+GLA RGH+LTY LA+SP V L +YG+PLYDN+++FAP T+ FT+P L+G++ + FV GGN++MA + MSDLTREIA EFGV+F+KKR+VV DHFS+AP LD+ G H VVS L+ NEK+LG AGRKGG +PVVF+GVG V+ EN+LA PIL+G SSTYSA P KEI + + AS+ L NAG LGLI VQ RNNAR +SGSLDFFSDA+F+H+L+ TG + GNELVA EMSKW GERGILRA+NVTHHRADGSNPEHLLAT EKPDLPFSLFPDPELNRQSLVYRIKDDIIYSL+IEEYD ++GGW PYQA DVQLEFVMLDPH+RTFLEC TGRFWKLFKVPD YG+FKFRILYRRPGLSVLAVNTQVSVRPF+HDEYERFIFSAFPYYASAFSMMAGFLVFGVA LYSKP+K GKS KKE
Sbjct: 2 MASTFQGPANMLAMLLFC-LSFMSLQWQIQGSTYEAQGRAGGKRTIALLDSLAILDTHSIFFAGLAARGHKLTYALATSPRVTLFEYGQPLYDNMVYFAPTTTVFTAPGLEGSQTLADFVAQGGNLIMAADVDMSDLTREIASEFGVDFDKKRTVVMDHFSHAPALDLKGLHTNVVSSNLIENEKILGPVAGRKGGAAPVVFRGVGHIVDPENILAVPILSGMSSTYSAAPLKEIPAPSLASA---RLTNAGTTLGLISGVQGRNNARATISGSLDFFSDAYFQHRLDTTG-QLAGNELVALEMSKWAFGERGILRASNVTHHRADGSNPEHLLATKEKPDLPFSLFPDPELNRQSLVYRIKDDIIYSLVIEEYDADRGGWVPYQASDVQLEFVMLDPHIRTFLECVPETGRFWKLFKVPDNYGIFKFRILYRRPGLSVLAVNTQVSVRPFHHDEYERFIFSAFPYYASAFSMMAGFLVFGVALLYSKPQKGDREGKSLKKE 498
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G02480.1 ID=NO14G02480.1|Name=NO14G02480.1|organism=Nannochloropsis oceanica|type=mRNA|length=3016bp GGCGTGAGCAAGGAAGGGGGCGGGTAGTTGGAGGGAGATGAATGTATGAG TCGTGTGCCTTGTGGTCGTCTTCTTTCGTGGTGGTCAAAGTCAAGACCTC ATCTCCCCCAAACAGGTTAGGGCATCCTTGGTATGTGTCGTTGCGGTCAA GACTCAGTCACAAGGCAATGCAAGGGACCAGGCACATTTGTTCCATGGCC GGCCCCCCTTGCGTGCCCTGGCTGACTGCAGAAGAAAGAAGGGCATACAC ACCAACAACAAAACAAGGGAGGCGTGCGACCAAGCCAGGGTGATTCGATG CCTGTGCGGTGTGTTTGTAAGTGTTGCGCTCTCGTGAATGCCTCGCTGAG GGTTGATGTCGGGGGTTGATTTTCGCCTCGACTGCCACCGTGGTTGTTCG TGCAGTAAGCGCGGGACCAGAGTCGGGTGTCTGCGCAGAAGGGAGGGAAC GAATAAGAGGAGACCAGCAAATACTCCGTCATTGTGGACCGCGGCTGCAC CGTAGGTATTTGCTTCTTTAAAGTGTGCAATATTGGGATTACAGCACGCA CTCCACTGCCTTCCAACCCGCGAATTGAGACAACAGTGATTCCATCGGAG AAGGAGAGGCATTGCATGCGCAGCCACTTGTCGGTGGTCGTCGGAAAGAG ACTCGCATCACTCCATCCCCCGTCGCTGACCGATGATCACTCTGACTGCT TGCTCATCGCCAACAACAATTTCTTCGACGCTTCCTTCCTGGGCTGGGCA CCTGATTTGAAAACCTTTGGGGATAAAGAAACCGTAGACCCTACCATGAG CTTGAATAGATGAAGCCATAAATTTGCCCTCTGGCTCCCAGAACGCGATC AGATCGAATTCCTCCCTCTTCCGCCCCTCTTGAGCCAGCCCTTCGCCAGC CAGACCATCATCTCACCCACCCTTCCGACTCCTCATGTAAACGCCTCGCA CACCACTACACAGAGTCAAGATGGTCTCGACGCTGCCACGACGACGAGGC ATAGGCGTGTTTTCGCTATGCTGCGTGTTGGCTATGGTGGTTCTCCCGCA ACCAGCCCAGGGGTCCACATATGAGGTCCAAGGCCACGTGGGCGGCAAAC GGACGCTTGTCCTCCTCGACACCTTCACCACCATCGAAACGCATTCGTTA TTCTTCTCTGGTTTGGCTGGACGTGGACACGAGCTTACCTATTTCCTAGC TAGCAGCCCTGACGTCCTCCTTTCCAAATACGGGGAGCCACTCTACGATA ATTTGATTTTCTTCGCCCCCGGGACCAGCGAGTTCACCAGTCCCTCCTTG GATGGAGCGGAGGGAATTGTTGCGTTTGTGGAGGGAGGTGGCAATGTACT TATGGCGGGGGAGAAGGGGATGAGCGACTTAACGAGGGAAATCGCGGGGG AGTTTGGGGTGGAATTTGAGAAGAAACGGAGCGTGGTCCAAGACCATTTC TCATATGCCCCCGGGTTGGATGTGAGCGGACGGCATTGGGCGGTTGTGAG TGATGGTTTGGTGAGGAATGAGAAGGTGTTGGGGAGGGACGCGGGGCGAA AAGGGGGGGTTTCGCCCGTGGTTTTTAAGGGGGTGGGGGTGACGGTGGAA TCGGAGAATGTCTTGGCATTCCCTATTTTGACTGGCGCGTCTTCGACCTA CTCGGCCGTTCCTAACAAGGAAATTATCTCTTCTACTGCAGCTTCATCCT TTCCGATGTCGTTGGCGAATGCAGGGAAGGCATTGGGTTTGATCGTGGCT GTGCAGGCGAGGAACAACGCCAGGGTGATTGTGTCAGGTTCCCTTGATTT CTTCTCGGATGCCTTTTTCGAGCATCAACTGGAAGGGACCGGGGGGAAGA AAGTAGGGAATGAGCTCGTGGCGCAGGAGATGAGCAAGTGGGGCCTGGGC GAGCGTGGGATATTAAGGGCGACCAATGTGACGCATCATCGCGCGGATGG GTCCAATCCCGAGCACCTCCTAGCGACCATAGAGAAACCAGACCTGCCCT TTTCCCTCTTTCCTGATCCGGAGCTTAACCGCCAATCGCTCGTGTATCGA ATCAAGGACGATATTATCTACTCCTTGATCATTGAGGAGTACGATGAGGA GAAGGGTGGGTGGGGCCCCTATCAGGCCGACGATGTCCAACTTGAATTTG TGATGCTTGACCCGCACGTGCGGACGTTCTTGGAATGCGAGAAGGGAACG GGGCGTTTCTGGAAGTTATTCAAGGTCCCGGATACGTATGGAGTATTTAA GTTTAGGATTCTATACCGGCGGCCGGGGTTGAGTGTGTTGGCGGTGAATA CGCAGGTGAGCGTCAGGCCGTTCAATCACGATGAGTATGAGCGCTTTATC TTTAGCGCATTCCCTTATTACGCGAGCGCGTTTTCAATGATGGCCGGATT CTTGGTGTTTGGGGTAGCGTTTTTGTACTCTAAACCGAAGAAGGCTGGTG GGGGGAAGAGCACCAAAAAGGAGTAGGAGAGGGAGTAGAGCTGTATGCAG TGAACTCTGTTCTTTCATGTGCCATGCGACTATGTTTTCGCATGTGGCAG GCATTTGGGCGTTCCGGATGGAATGTCACTAAAGCGTGCCGGGGTTTGGA AGAGGGGGGAAGAGAACAAAGACGGAGGAAAGGCAAGGCTGGAGGTTGGA GAGAAAGGGACCGATAGACCAAGAGGTCGTGTATCTGTGTGAAATGGAGG GAAGGATGAGAGCGGAAGGGGGGTTGGGATGATAAAAGGAAAGACTGGGA GCGCAGGAGCGGGGCCCCAGCCAGCTTATCCAGAACCATATTAAGCCCCA AAAACGGAAAACTGCAGAGGAAGGGCATAATTGTGTCTGGCTTGAGGAGA AGAAGAGGGTAGAATAGGATGGGTGACAACGACATCAGGAAGAAAGAAAC AGAACGAAGACGACAGATCAAAAAATAAAACGGAGGCCCACGGGCGTGTC TATCAAAGAAAGAATCAACGCAACGCAACGCAACAGTAGATGAAAATAAG AATCAATTATCAAGGT back to topprotein sequence of NO14G02480.1 >NO14G02480.1-protein ID=NO14G02480.1-protein|Name=NO14G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bp MVSTLPRRRGIGVFSLCCVLAMVVLPQPAQGSTYEVQGHVGGKRTLVLLD TFTTIETHSLFFSGLAGRGHELTYFLASSPDVLLSKYGEPLYDNLIFFAP GTSEFTSPSLDGAEGIVAFVEGGGNVLMAGEKGMSDLTREIAGEFGVEFE KKRSVVQDHFSYAPGLDVSGRHWAVVSDGLVRNEKVLGRDAGRKGGVSPV VFKGVGVTVESENVLAFPILTGASSTYSAVPNKEIISSTAASSFPMSLAN AGKALGLIVAVQARNNARVIVSGSLDFFSDAFFEHQLEGTGGKKVGNELV AQEMSKWGLGERGILRATNVTHHRADGSNPEHLLATIEKPDLPFSLFPDP ELNRQSLVYRIKDDIIYSLIIEEYDEEKGGWGPYQADDVQLEFVMLDPHV RTFLECEKGTGRFWKLFKVPDTYGVFKFRILYRRPGLSVLAVNTQVSVRP FNHDEYERFIFSAFPYYASAFSMMAGFLVFGVAFLYSKPKKAGGGKSTKK E* back to topmRNA from alignment at chr14:741023..744646- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G02480.1 ID=NO14G02480.1|Name=NO14G02480.1|organism=Nannochloropsis oceanica|type=mRNA|length=3624bp|location=Sequence derived from alignment at chr14:741023..744646- (Nannochloropsis oceanica) GGCGTGAGCAAGGAAGGGGGCGGGTAGTTGGAGGGAGATGAATGTATGAG
TCGTGTGCCTTGTGGTCGTCTTCTTTCGTGGTGGTCAAAGTCAAGACCTC
ATCTCCCCCAAACAGGTTAGGGCATCCTTGGTATGTGTCGTTGCGGTCAA
GACTCAGTCACAAGGCAATGCAAGGGACCAGGCACATTTGTTCCATGGCC
GGCCCCCCTTGCGTGCCCTGGCTGACTGCAGAAGAAAGAAGGGCATACAC
ACCAACAACAAAACAAGGGAGGCGTGCGACCAAGCCAGGGTGATTCGATG
CCTGTGCGGTGTGTTTGTAAGTGTTGCGCTCTCGTGAATGCCTCGCTGAG
GGTTGATGTCGGGGGTTGATTTTCGCCTCGACTGCCACCGTGGTTGTTCG
TGCAGTAAGCGCGGGACCAGAGTCGGGTGTCTGCGCAGAAGGGAGGGAAC
GAATAAGAGGAGACCAGCAAATACTCCGTCATTGTGGACCGCGGCTGCAC
CGTAGGTATTTGCTTCTTTAAAGTGTGCAATATTGGGATTACAGCACGCA
CTCCACTGCCTTCCAACCCGCGAATTGAGACAACAGTGATTCCATCGGAG
AAGGAGAGGCATTGCATGCGCAGCCACTTGTCGGTGGTCGTCGGAAAGAG
ACTCGCATCACTCCATCCCCCGTCGCTGACCGATGATCACTCTGACTGCT
TGCTCATCGCCAACAACAATTTCTTCGACGCTTCCTTCCTGGGCTGGGCA
CCTGATTTGAAAACCTTTGGGGATAAAGAAACCGTAGACCCTACCATGAG
CTTGAATAGATGAAGCCATAAATTTGCCCTCTGGCTCCCAGAACGCGATC
AGATCGAATTCCTCCCTCTTCCGCCCCTCTTGAGCCAGCCCTTCGCCAGC
CAGACCATCATCTCACCCACCCTTCCGACTCCTCATGTAAACGCCTCGCA
CACCACTACACAGAGTCAAGATGGTCTCGACGCTGCCACGACGACGAGGC
ATAGGCGTGTTTTCGCTATGCTGCGTGTTGGCTATGGTGGTTCTCCCGCA
ACCAGCCCAGGGGTCCACATATGAGGTCCAAGGTGCGTTTGAGCGAAGGG
AGTAAGAGAGGGTTGCGTGGTGAAGAAAGCACAAGCGAAATGTGGAGTGG
ACGCTGTCATGTGTAAAGCACGGCTGTTTGGTCGATATCTTCTTGTGTTT
GATTCTGGATGAGTGCCAAAATGAGGAGCGGGGGAGCGAAAGGCAAGCGC
CTGCTCTTGCTGCCAGAAAGAACATGACAGGGCGCTGCGTGTGTGGGGCT
ACGTTGTATACTTTTTGTAACATTTGAATCTAAGCCGCTTAGCTGCGTTG
TGTTTGCCGTCCATGTATATTTTATTCTCTGTTTTATGCCACCACTCCCG
ACAGACCCGTCTTCCCTCCCTCTCTCCGTCCCTCCCCCCCTTTGCAACTT
ACAGGCCACGTGGGCGGCAAACGGACGCTTGTCCTCCTCGACACCTTCAC
CACCATCGAAACGCATTCGTTATTCTTCTCTGGTTTGGCTGGACGTGGAC
ACGAGCTTACCTATTTCCTAGCTAGCAGCCCTGACGTCCTCCTTTCCAAA
TACGGGGAGCCACTCTACGATAATTTGATTTTCTTCGCCCCCGGGACCAG
CGAGTTCACCAGTCCCTCCTTGGATGGAGCGGAGGGAATTGTTGCGTTTG
TGGAGGGAGGTGGCAATGTACTTATGGCGGGGGAGAAGGGGATGAGCGAC
TTAACGAGGGAAATCGCGGGGGAGTTTGGGGTGGAATTTGAGAAGAAACG
GAGCGTGGTCCAAGACCATTTCTCATATGCCCCCGGGTTGGATGTGAGCG
GACGGCATTGGGCGGTTGTGAGTGATGGTTTGGTGAGGAATGAGAAGGTG
TTGGGGAGGGACGCGGGGCGAAAAGGGGGGGTTTCGCCCGTGGTTTTTAA
GGGGGTGGGGGTGACGGTGGAATCGGAGAATGTCTTGGCATTCCCTATTT
TGACTGGCGCGTCTTCGACCTACTCGGCCGTTCCTAACAAGGAAATTATC
TCTTCTACTGCAGCTTCATCCTTTCCGATGTCGTTGGCGAATGCAGGGAA
GGCATTGGGTTTGATCGTGGCTGTGCAGGCGAGGAACAACGCCAGGGTGA
TTGTGTCAGGTTCCCTTGATTTCTTCTCGGATGCCTTTTTCGAGCATCAA
CTGGAAGGGACCGGGGGGAAGAAAGTAGGGAATGAGCTCGTGGCGCAGGA
GATGAGCAAGTGGGGCCTGGGCGAGCGTGGGATATTAAGGGCGACCAATG
TGACGCATCATCGCGCGGATGGGTAGGTGCTCGGAAGGGGAGGGACGGAG
GAGGGTAGGGGGACGGAATATTGTTGTGTCTGGGGAAAGGTATGGGGATG
GGAATATGTATGGTGCACCTTTTTGCTCGTGATGCGGTATATATGTTGCA
ATTATATCCAAATTAGTCATCCTTTCCCCTCTGATCCATCTCTTTCTTCC
CCGTTCATCCATCCCTCCTACCCTCCTCCCACCCCCCCCTTCCTCCCCTT
CCTCCCAGGTCCAATCCCGAGCACCTCCTAGCGACCATAGAGAAACCAGA
CCTGCCCTTTTCCCTCTTTCCTGATCCGGAGCTTAACCGCCAATCGCTCG
TGTATCGAATCAAGGACGATATTATCTACTCCTTGATCATTGAGGAGTAC
GATGAGGAGAAGGGTGGGTGGGGCCCCTATCAGGCCGACGATGTCCAACT
TGAATTTGTGATGCTTGACCCGCACGTGCGGACGTTCTTGGAATGCGAGA
AGGGAACGGGGCGTTTCTGGAAGTTATTCAAGGTCCCGGATACGTATGGA
GTATTTAAGTTTAGGATTCTATACCGGCGGCCGGGGTTGAGTGTGTTGGC
GGTGAATACGCAGGTGAGCGTCAGGCCGTTCAATCACGATGAGTATGAGC
GCTTTATCTTTAGCGCATTCCCTTATTACGCGAGCGCGTTTTCAATGATG
GCCGGATTCTTGGTGTTTGGGGTAGCGTTTTTGTACTCTAAACCGAAGAA
GGCTGGTGGGGGGAAGAGCACCAAAAAGGAGTAGGAGAGGGAGTAGAGCT
GTATGCAGTGAACTCTGTTCTTTCATGTGCCATGCGACTATGTTTTCGCA
TGTGGCAGGCATTTGGGCGTTCCGGATGGAATGTCACTAAAGCGTGCCGG
GGTTTGGAAGAGGGGGGAAGAGAACAAAGACGGAGGAAAGGCAAGGCTGG
AGGTTGGAGAGAAAGGGACCGATAGACCAAGAGGTCGTGTATCTGTGTGA
AATGGAGGGAAGGATGAGAGCGGAAGGGGGGTTGGGATGATAAAAGGAAA
GACTGGGAGCGCAGGAGCGGGGCCCCAGCCAGCTTATCCAGAACCATATT
AAGCCCCAAAAACGGAAAACTGCAGAGGAAGGGCATAATTGTGTCTGGCT
TGAGGAGAAGAAGAGGGTAGAATAGGATGGGTGACAACGACATCAGGAAG
AAAGAAACAGAACGAAGACGACAGATCAAAAAATAAAACGGAGGCCCACG
GGCGTGTCTATCAAAGAAAGAATCAACGCAACGCAACGCAACAGTAGATG
AAAATAAGAATCAATTATCAAGGT back to topCoding sequence (CDS) from alignment at chr14:741023..744646- >NO14G02480.1 ID=NO14G02480.1|Name=NO14G02480.1|organism=Nannochloropsis oceanica|type=CDS|length=1506bp|location=Sequence derived from alignment at chr14:741023..744646- (Nannochloropsis oceanica) ATGGTCTCGACGCTGCCACGACGACGAGGCATAGGCGTGTTTTCGCTATG CTGCGTGTTGGCTATGGTGGTTCTCCCGCAACCAGCCCAGGGGTCCACAT ATGAGGTCCAAGGCCACGTGGGCGGCAAACGGACGCTTGTCCTCCTCGAC ACCTTCACCACCATCGAAACGCATTCGTTATTCTTCTCTGGTTTGGCTGG ACGTGGACACGAGCTTACCTATTTCCTAGCTAGCAGCCCTGACGTCCTCC TTTCCAAATACGGGGAGCCACTCTACGATAATTTGATTTTCTTCGCCCCC GGGACCAGCGAGTTCACCAGTCCCTCCTTGGATGGAGCGGAGGGAATTGT TGCGTTTGTGGAGGGAGGTGGCAATGTACTTATGGCGGGGGAGAAGGGGA TGAGCGACTTAACGAGGGAAATCGCGGGGGAGTTTGGGGTGGAATTTGAG AAGAAACGGAGCGTGGTCCAAGACCATTTCTCATATGCCCCCGGGTTGGA TGTGAGCGGACGGCATTGGGCGGTTGTGAGTGATGGTTTGGTGAGGAATG AGAAGGTGTTGGGGAGGGACGCGGGGCGAAAAGGGGGGGTTTCGCCCGTG GTTTTTAAGGGGGTGGGGGTGACGGTGGAATCGGAGAATGTCTTGGCATT CCCTATTTTGACTGGCGCGTCTTCGACCTACTCGGCCGTTCCTAACAAGG AAATTATCTCTTCTACTGCAGCTTCATCCTTTCCGATGTCGTTGGCGAAT GCAGGGAAGGCATTGGGTTTGATCGTGGCTGTGCAGGCGAGGAACAACGC CAGGGTGATTGTGTCAGGTTCCCTTGATTTCTTCTCGGATGCCTTTTTCG AGCATCAACTGGAAGGGACCGGGGGGAAGAAAGTAGGGAATGAGCTCGTG GCGCAGGAGATGAGCAAGTGGGGCCTGGGCGAGCGTGGGATATTAAGGGC GACCAATGTGACGCATCATCGCGCGGATGGGTCCAATCCCGAGCACCTCC TAGCGACCATAGAGAAACCAGACCTGCCCTTTTCCCTCTTTCCTGATCCG GAGCTTAACCGCCAATCGCTCGTGTATCGAATCAAGGACGATATTATCTA CTCCTTGATCATTGAGGAGTACGATGAGGAGAAGGGTGGGTGGGGCCCCT ATCAGGCCGACGATGTCCAACTTGAATTTGTGATGCTTGACCCGCACGTG CGGACGTTCTTGGAATGCGAGAAGGGAACGGGGCGTTTCTGGAAGTTATT CAAGGTCCCGGATACGTATGGAGTATTTAAGTTTAGGATTCTATACCGGC GGCCGGGGTTGAGTGTGTTGGCGGTGAATACGCAGGTGAGCGTCAGGCCG TTCAATCACGATGAGTATGAGCGCTTTATCTTTAGCGCATTCCCTTATTA CGCGAGCGCGTTTTCAATGATGGCCGGATTCTTGGTGTTTGGGGTAGCGT TTTTGTACTCTAAACCGAAGAAGGCTGGTGGGGGGAAGAGCACCAAAAAG GAGTAG back to top
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