NO14G02450.2, NO14G02450.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G02450.2
Unique NameNO14G02450.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2595
Alignment locationchr14:730237..733202 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:730237..733202 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO14G02450.2 vs.
Match: GAX15336.1 (hypothetical protein FisN_8Lh371 [Fistulifera solaris])

HSP 1 Score: 310.8 bits (795), Expect = 6.500e-81
Identity = 157/359 (43.73%), Postives = 228/359 (63.51%), Query Frame = 0 
Query:   70 EKADKIVIWSFAAPHMRAFHLAWFGFFIAFNAWFAIAPLMPVIKKSLDLTKDQVQMSNLAAVASTVFTRILIGPLCDRYGPKVTMAGLLALGAIPVFLIGVVNNWQGLVALRFFIGILGATFVQSQAWTTNMFKKRCIGAANAIVGGWGNLGGGSTQVIMVSIFAGIQS--WGVDPEKAWRISFVFPGIALIITAAIVQFFGQDTPRGDIRQLIKNGESP-VKSTTAFKAAASNYMSYIMCLQYSVTFGVELVLFNMTASYFHDEFGADVTKAGQIALLCGITNIFARWLGGWLSDLANSYAEIKGRMTVQFTLVLFESIFIIWFSHARTQTEATLLLLAFSIFVQAANGSCFAITPYI 426
            +KA +I + SFA PHMRAFH++WFGFF+AF  WF+ APL+  I+  L LTK Q+  +++ AV  T+  R ++GPLCD++GP++   G+L   +IP  L G+ N++  L+ +R  IGI G TFV  Q WTT MF K  +G ANA VGGWGNLGGG TQ+++ SI   +    +  D EKAWR  FV P +     A  +  F +D P+G+  ++ K+G  P V +  +F+AA+ N+ ++I+ LQY+  FGVEL + N  A YF DEFG     A  IA + G  N+FAR +GG  SDL N+   +KGR+ +    +L E I ++ F++ +T + A ++++ FS+ VQAA G+ F I PYI
Sbjct:   26 DKATEIKLLSFARPHMRAFHMSWFGFFMAFFIWFSAAPLLSEIRGDLGLTKKQIWSTSVIAVGGTILFRFIMGPLCDKFGPRLPFVGVLMFASIPTGLTGLANSFNSLLIIRLLIGIAGCTFVMCQYWTTRMFTKSVVGTANATVGGWGNLGGGVTQLVVGSILFPLFKVFYDGDSEKAWRTVFVVPAVVAFSVAVCMLLFSEDAPKGNYGEMKKHGVMPEVSAAASFRAASFNFNTWILFLQYAACFGVELTMNNAAALYFTDEFGQSTESAAAIASIFGWMNLFARGMGGVFSDLFNAKMGMKGRILIHTLFLLGEGILVMVFANTKTMSSAIVVMIFFSLCVQAAEGTSFGIVPYI 384
The following BLAST results are available for this feature:
BLAST of NO14G02450.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
GAX15336.16.500e-8143.73hypothetical protein FisN_8Lh371 [Fistulifera sola... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02450NO14G02450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G02450.2NO14G02450.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G02450.2.cds1NO14G02450.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G02450.2.cds2NO14G02450.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G02450.2.cds3NO14G02450.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G02450.2.cds4NO14G02450.2.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G02450.2 ID=NO14G02450.2|Name=NO14G02450.2|organism=Nannochloropsis oceanica|type=mRNA|length=2595bp
TAAATTGAAAACCCGCCGATTTTCAACCGGACTTAGCCAACGTGGTCATC
TCCAGTTACTCTTGAGTGGGGGTATTATGATTTGTCTTGCTTGTTTGCTT
CTTTATGAAAGCTTGGCATTGTTTTTTCCAAAGCACCTAATGACATGCCG
CTTTTACCCATTTCACTGGAGTCTACTGCCATTGCGTCGTGCGCTTTGGT
GACACTTTGCACGCGTGCTGGAGGCACAAAAGCGGCCATTTACACATATC
GGGAGAGTATGTGCCCTAGGCCCGATCTTGCGCCCTTACTTAATGACGGC
CCTTTCTCACTTTTAGAGACCTTGCGTCTGACATAAAAATATGCCCACGC
GCGGCCCGGCGCAGCAGTGCTTCGCTTGTGCTTCAGACGGGCGTGTAGCC
ACCGCCTCCGCCTCTGAAAACAGCGCCCTTCACGCACGATCCCCTCCTCC
GCTACCCCATCCTAAACAGAAGCCCTACAACCTGATACTGCGCATCATGT
CCAAGCCTGAGTCATCCAAGCACCTGACCACGGCCGTCACCGAGGCCGAG
AAGGCTGACAAAATCGTGATATGGAGCTTCGCGGCCCCGCACATGCGCGC
CTTTCACCTGGCCTGGTTTGGCTTCTTCATCGCCTTCAACGCATGGTTCG
CCATCGCCCCCCTTATGCCCGTCATAAAAAAAAGCCTAGATCTTACTAAG
GACCAAGTTCAAATGTCCAATCTTGCCGCTGTCGCCTCAACTGTCTTTAC
CCGTATCCTTATCGGCCCCCTCTGCGACCGCTATGGCCCCAAGGTCACCA
TGGCGGGGCTACTAGCACTCGGCGCTATTCCCGTCTTCCTGATTGGCGTC
GTCAACAACTGGCAGGGCCTCGTCGCTCTCCGCTTTTTTATAGGCATTTT
GGGTGCTACATTTGTCCAGTCTCAGGCGTGGACCACCAACATGTTCAAGA
AACGGTGCATCGGGGCAGCCAACGCCATCGTTGGTGGTTGGGGTAACCTC
GGAGGTGGCAGCACCCAAGTCATCATGGTTTCGATTTTTGCAGGGATCCA
AAGCTGGGGCGTGGACCCGGAGAAAGCCTGGCGTATAAGCTTCGTTTTCC
CTGGTATTGCCCTCATTATCACGGCTGCCATCGTTCAATTCTTTGGTCAA
GACACCCCTCGGGGTGATATCAGACAGCTTATTAAGAATGGTGAGTCGCC
CGTCAAGTCGACCACGGCGTTCAAGGCGGCTGCATCCAACTACATGTCTT
ATATCATGTGCCTTCAGTACTCGGTCACCTTCGGGGTGGAACTCGTGCTT
TTCAACATGACCGCCTCCTACTTTCACGACGAGTTCGGCGCCGATGTGAC
CAAGGCCGGACAGATCGCCTTGCTCTGCGGGATCACCAACATCTTCGCCC
GCTGGCTCGGTGGATGGCTGAGCGACCTTGCCAATTCCTACGCTGAGATT
AAGGGCCGCATGACCGTGCAGTTCACCCTCGTCCTGTTCGAGTCCATTTT
CATCATCTGGTTCTCCCATGCCAGGACGCAGACCGAAGCTACGCTCCTCC
TTCTTGCCTTTTCCATATTTGTGCAGGCTGCCAACGGATCGTGCTTTGCA
ATTACGCCCTATATCGCCAAGTCAGCCGGTGAGTAAGCGAGGGAAGAAGA
GGTCGACGAAAAGGGGAGGATGGGATCTACTTCATCTAGGAAACCAACTG
GGAAGGGGGGGAAAGGAGTAGCGACCATTCCATTCACTAAAATATCTATT
TCTGCATAACCTACCCTCCTCGCCCCATCAAAAAGGCGGCAGTGTGTCGG
GTATTGTCGGCGCCGGCGGCAATTGCGGCGCCGTCATCTTCACCCTCCTC
TTCCTGCATGGTAAATTTTCCTCCACCGCCCAAGGCTTCCGAATTATGGG
CTGGTGTGTCATGGCCGTTTCCTTTACGATCTGGTTCCTCCGCCCTGATT
TGCTTGCCGTCGACCCCCTGAGTGACACGGTCAGAAGTGACGCTTCCGTC
GAGGCAGCTGAAGAGGCGGATGCGGTGGAGATGGGGAATGTAGCGAAGGT
CACCGCCTAAATCTAGAACCTCTTTTGAGTAGAGGACGTGTTCCTTCTGA
GAAAGATTTTGGACGACTGTGGTTGATGGTTGTAGGCGAAGGGACAGTGG
AGAGATATTTTGACAAACAAACAGAGTATGAATATAAATAGCCTGGAGGA
CCTGGTGGGGTGATATTACCAGAAAAAAGAGGAATGCTTGATTGCAATGA
GCGCTGTGAGCTGTGCTGATATGACAAGACGACAGGATAATAGTATGGTA
TATAAATAATGAGGAGCGAGGGTCTAGATGTGTCTGAATGGACTAGAATG
CGGGTTGCATGACAGAGTGATAAGTTTTGTTGCATGTTGGTTGGTGACTA
AGATGCTGTGTGATTCTTCAGAATAGAGAGAAGTCCAGACAATTCAGTGC
GATTTCCATCGCTGTAAGGTTTCTTTGATTTTGCGATGCGTGATTATTGA
TCTCTCCTCTGAACAAAACCGCCGGTGTTGAATGCCTGCGTGTTTTGTTA
TCAAATATAAAGAAAGAACAGTGCAGAGGCTTGAGGTGTACATAG
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protein sequence of NO14G02450.2

>NO14G02450.2-protein ID=NO14G02450.2-protein|Name=NO14G02450.2|organism=Nannochloropsis oceanica|type=polypeptide|length=432bp
MPTRGPAQQCFACASDGRVATASASENSALHARSPPPLPHPKQKPYNLIL
RIMSKPESSKHLTTAVTEAEKADKIVIWSFAAPHMRAFHLAWFGFFIAFN
AWFAIAPLMPVIKKSLDLTKDQVQMSNLAAVASTVFTRILIGPLCDRYGP
KVTMAGLLALGAIPVFLIGVVNNWQGLVALRFFIGILGATFVQSQAWTTN
MFKKRCIGAANAIVGGWGNLGGGSTQVIMVSIFAGIQSWGVDPEKAWRIS
FVFPGIALIITAAIVQFFGQDTPRGDIRQLIKNGESPVKSTTAFKAAASN
YMSYIMCLQYSVTFGVELVLFNMTASYFHDEFGADVTKAGQIALLCGITN
IFARWLGGWLSDLANSYAEIKGRMTVQFTLVLFESIFIIWFSHARTQTEA
TLLLLAFSIFVQAANGSCFAITPYIAKSAGE*
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mRNA from alignment at chr14:730237..733202-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G02450.2 ID=NO14G02450.2|Name=NO14G02450.2|organism=Nannochloropsis oceanica|type=mRNA|length=2966bp|location=Sequence derived from alignment at chr14:730237..733202- (Nannochloropsis oceanica)
TAAATTGAAAACCCGCCGATTTTCAACCGGACTTAGCCAACGTGGTCATC
TCCAGTTACTCTTGAGTGGGGGTATTATGATTTGTCTTGCTTGTTTGCTT
CTTTATGAAAGCTTGGCATTGTTTTTTCCAAAGCACCTAATGACATGCCG
CTTTTACCCATTTCACTGGAGTCTACTGCCATTGCGTCGTGCGCTTTGGT
GACACTTTGCACGCGTGCTGGAGGCACAAAAGCGGCCATTTACACATATC
GGGAGAGTATGTGCCCTAGGCCCGATCTTGCGCCCTTACTTAATGACGGC
CCTTTCTCACTTTTAGAGACCTTGCGTCTGACATAAAAATATGCCCACGC
GCGGCCCGGCGCAGCAGTGCTTCGCTTGTGCTTCAGACGGGCGTGTAGCC
ACCGCCTCCGCCTCTGAAAACAGCGCCCTTCACGCACGATCCCCTCCTCC
GCTACCCCATCCTAAACAGAAGCCCTACAACCTGATACTGCGCATCATGT
CCAAGCCTGAGTCATCCAAGCACCTGACCACGGCCGTCACCGAGGCCGAG
AAGGCTGACAAAATCGTGATATGGAGCTTCGCGGCCCCGCACATGCGCGC
CTTTCACCTGGCCTGGTTTGGCTTCTTCATCGTAAGTGTTGGCAAAGGTC
GGGGATTGGGGATTAGATGGGGGAACGGGGTGGATGATTTATCCAGCGAC
AGCCACGGCAGCACCAGCACGCTCATCAGCTTCCCTTGCACCTTCCTCTA
CATTTTTGCTCCCCGCAGGCCTTCAACGCATGGTTCGCCATCGCCCCCCT
TATGCCCGTCATAAAAAAAAGCCTAGATCTTACTAAGGACCAAGTTCAAA
TGTCCAATCTTGCCGCTGTCGCCTCAACTGTCTTTACCCGTATCCTTATC
GGCCCCCTCTGCGACCGCTATGGCCCCAAGGTCACCATGGCGGGGCTACT
AGCACTCGGCGCTATTCCCGTCTTCCTGATTGGCGTCGTCAACAACTGGC
AGGGCCTCGTCGCTCTCCGCTTTTTTATAGGCATTTTGGGTGCTACATTT
GTCCAGTCTCAGGCGTGGACCACCAACATGTTCAAGAAACGGTGCATCGG
GGCAGCCAACGCCATCGTTGGTGGTTGGGGTAACCTCGGAGGTGGCAGCA
CCCAAGTCATCATGGTTTCGATTTTTGCAGGGATCCAAAGCTGGGGCGTG
GACCCGGAGAAAGCCTGGCGTATAAGCTTCGTTTTCCCTGGTATTGCCCT
CATTATCACGGCTGCCATCGTTCAATTCTTTGGTCAAGACACCCCTCGGG
TAGGTAAGGAGAGGAAAAAGAGACGAACGGGACTGAAGAAGACATACAGA
AGCGAGTACTGACCTCAATTTGGATTACCATTTCCCCACCAACTACACAG
GGTGATATCAGACAGCTTATTAAGAATGGTGAGTCGCCCGTCAAGTCGAC
CACGGCGTTCAAGGCGGCTGCATCCAACTACATGTCTTATATCATGTGCC
TTCAGTACTCGGTCACCTTCGGGGTGGAACTCGTGCTTTTCAACATGACC
GCCTCCTACTTTCACGACGAGTTCGGCGCCGATGTGACCAAGGCCGGACA
GATCGCCTTGCTCTGCGGGGTACGTAAAACACCCTCCCACTTTCCTTCCC
TCCCTCCATCCCTCCGTCCCGCGGCCGGTAGTCAAAACAACAAACAATTG
GACGGTCCCTTACAGAGCCCTTCGACCCACTTCTGCCTAATTCAACCCAC
AGATCACCAACATCTTCGCCCGCTGGCTCGGTGGATGGCTGAGCGACCTT
GCCAATTCCTACGCTGAGATTAAGGGCCGCATGACCGTGCAGTTCACCCT
CGTCCTGTTCGAGTCCATTTTCATCATCTGGTTCTCCCATGCCAGGACGC
AGACCGAAGCTACGCTCCTCCTTCTTGCCTTTTCCATATTTGTGCAGGCT
GCCAACGGATCGTGCTTTGCAATTACGCCCTATATCGCCAAGTCAGCCGG
TGAGTAAGCGAGGGAAGAAGAGGTCGACGAAAAGGGGAGGATGGGATCTA
CTTCATCTAGGAAACCAACTGGGAAGGGGGGGAAAGGAGTAGCGACCATT
CCATTCACTAAAATATCTATTTCTGCATAACCTACCCTCCTCGCCCCATC
AAAAAGGCGGCAGTGTGTCGGGTATTGTCGGCGCCGGCGGCAATTGCGGC
GCCGTCATCTTCACCCTCCTCTTCCTGCATGGTAAATTTTCCTCCACCGC
CCAAGGCTTCCGAATTATGGGCTGGTGTGTCATGGCCGTTTCCTTTACGA
TCTGGTTCCTCCGCCCTGATTTGCTTGCCGTCGACCCCCTGAGTGACACG
GTCAGAAGTGACGCTTCCGTCGAGGCAGCTGAAGAGGCGGATGCGGTGGA
GATGGGGAATGTAGCGAAGGTCACCGCCTAAATCTAGAACCTCTTTTGAG
TAGAGGACGTGTTCCTTCTGAGAAAGATTTTGGACGACTGTGGTTGATGG
TTGTAGGCGAAGGGACAGTGGAGAGATATTTTGACAAACAAACAGAGTAT
GAATATAAATAGCCTGGAGGACCTGGTGGGGTGATATTACCAGAAAAAAG
AGGAATGCTTGATTGCAATGAGCGCTGTGAGCTGTGCTGATATGACAAGA
CGACAGGATAATAGTATGGTATATAAATAATGAGGAGCGAGGGTCTAGAT
GTGTCTGAATGGACTAGAATGCGGGTTGCATGACAGAGTGATAAGTTTTG
TTGCATGTTGGTTGGTGACTAAGATGCTGTGTGATTCTTCAGAATAGAGA
GAAGTCCAGACAATTCAGTGCGATTTCCATCGCTGTAAGGTTTCTTTGAT
TTTGCGATGCGTGATTATTGATCTCTCCTCTGAACAAAACCGCCGGTGTT
GAATGCCTGCGTGTTTTGTTATCAAATATAAAGAAAGAACAGTGCAGAGG
CTTGAGGTGTACATAG
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Coding sequence (CDS) from alignment at chr14:730237..733202-

>NO14G02450.2 ID=NO14G02450.2|Name=NO14G02450.2|organism=Nannochloropsis oceanica|type=CDS|length=1296bp|location=Sequence derived from alignment at chr14:730237..733202- (Nannochloropsis oceanica)
ATGCCCACGCGCGGCCCGGCGCAGCAGTGCTTCGCTTGTGCTTCAGACGG
GCGTGTAGCCACCGCCTCCGCCTCTGAAAACAGCGCCCTTCACGCACGAT
CCCCTCCTCCGCTACCCCATCCTAAACAGAAGCCCTACAACCTGATACTG
CGCATCATGTCCAAGCCTGAGTCATCCAAGCACCTGACCACGGCCGTCAC
CGAGGCCGAGAAGGCTGACAAAATCGTGATATGGAGCTTCGCGGCCCCGC
ACATGCGCGCCTTTCACCTGGCCTGGTTTGGCTTCTTCATCGCCTTCAAC
GCATGGTTCGCCATCGCCCCCCTTATGCCCGTCATAAAAAAAAGCCTAGA
TCTTACTAAGGACCAAGTTCAAATGTCCAATCTTGCCGCTGTCGCCTCAA
CTGTCTTTACCCGTATCCTTATCGGCCCCCTCTGCGACCGCTATGGCCCC
AAGGTCACCATGGCGGGGCTACTAGCACTCGGCGCTATTCCCGTCTTCCT
GATTGGCGTCGTCAACAACTGGCAGGGCCTCGTCGCTCTCCGCTTTTTTA
TAGGCATTTTGGGTGCTACATTTGTCCAGTCTCAGGCGTGGACCACCAAC
ATGTTCAAGAAACGGTGCATCGGGGCAGCCAACGCCATCGTTGGTGGTTG
GGGTAACCTCGGAGGTGGCAGCACCCAAGTCATCATGGTTTCGATTTTTG
CAGGGATCCAAAGCTGGGGCGTGGACCCGGAGAAAGCCTGGCGTATAAGC
TTCGTTTTCCCTGGTATTGCCCTCATTATCACGGCTGCCATCGTTCAATT
CTTTGGTCAAGACACCCCTCGGGGTGATATCAGACAGCTTATTAAGAATG
GTGAGTCGCCCGTCAAGTCGACCACGGCGTTCAAGGCGGCTGCATCCAAC
TACATGTCTTATATCATGTGCCTTCAGTACTCGGTCACCTTCGGGGTGGA
ACTCGTGCTTTTCAACATGACCGCCTCCTACTTTCACGACGAGTTCGGCG
CCGATGTGACCAAGGCCGGACAGATCGCCTTGCTCTGCGGGATCACCAAC
ATCTTCGCCCGCTGGCTCGGTGGATGGCTGAGCGACCTTGCCAATTCCTA
CGCTGAGATTAAGGGCCGCATGACCGTGCAGTTCACCCTCGTCCTGTTCG
AGTCCATTTTCATCATCTGGTTCTCCCATGCCAGGACGCAGACCGAAGCT
ACGCTCCTCCTTCTTGCCTTTTCCATATTTGTGCAGGCTGCCAACGGATC
GTGCTTTGCAATTACGCCCTATATCGCCAAGTCAGCCGGTGAGTAA
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Synonyms
Publications