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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr14 | genome | chr14:691689..694470 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G02310.2 vs.
Match: EWM24576.1 (Nucleotide-diphospho-sugar transferase [Nannochloropsis gaditana]) HSP 1 Score: 567.8 bits (1462), Expect = 3.100e-158 Identity = 284/465 (61.08%), Postives = 350/465 (75.27%), Query Frame = 0
Query: 2 GLEMFGFVDGNQASAEFLDFLPANVKSGVYNQSMVLMTSQSGFKSSHSSSLLSSRRSPGDTLDFSDLQTCKEVDVISMVQGRCYVAINTPLKYSSSHVHRYQHQPRSEEKKSDEGGK----QGREAGAE-------GWSLVPRIANEGSAPPSMRNIRKHEAFLLELFSNLPSLEQEAEAFFSRVADTKKRVMVMALNEGDIDLLVNFVCSAKQAGVSLSNLVVIGADQSVVDVATSLKLHSFSHPAFGTLPSEHSEFYGDAGFQAIMWLKVVSVWIALRLGYHVLFQDADLVWFKSPWSAFDDESIDGFFMDDGARSERFSPLYANSGFYFLRSNRVVSHFMQGLLFSYDSIVQYASHQTVFIQGLTEHIARNGMRVKVLSNVEFPGGQIYHHRKELMKQISARTYLPYVFHMCWTRTKADKLSQFIASDLWYLTTACNGTDATLRSQQEGKISIDTCCLDPTA 456
GLE GFVDG +A +EFL F+P ++S V + +M MT SGF S S S T F DLQ CKEVDVI++ + RCYVA+NT + SS HVHRY E + EGGK + ++AG E W L PRI+ EGS PP M ++R E FLLELFSNLP LE++A A F+R AD++KR+++MALNEGD+DLLVNFVCSA+QA +S+ NLVVI AD+SVVD+A +L LH+FSHP FGTLPSE S YGD FQ +MWLKVVSVWIA+RLGYHVLFQDADLVW KSPW AF D SIDGFFMDDGARSERFSPLYANSGFYFLRSN +V HFMQGLL SYD+I Q ASHQTVFI+ +TEH++R+GM+VKVL + +FP GQ++HH+K LM++I+AR + PYVFHMCWT+ K DK+ I S++WY+T+ CN +DA L++Q+EG+IS+ CCLDP A
Sbjct: 155 GLEFHGFVDGKRAFSEFLPFVPEKIQSKVSDHAMAFMTKGSGFLPLRSPS------SADGTFPFEDLQACKEVDVIALARERCYVAVNTQMSQSSFHVHRYS-PVAPEPVEGKEGGKKEAKEDKQAGEEVEALRPPSWRLKPRISLEGSRPPKMTHMRSQEGFLLELFSNLPDLEEKAGALFARAADSQKRLLIMALNEGDVDLLVNFVCSARQASISVENLVVISADKSVVDIAEALNLHAFSHPGFGTLPSERSGRYGDENFQVMMWLKVVSVWIAIRLGYHVLFQDADLVWLKSPWEAFADTSIDGFFMDDGARSERFSPLYANSGFYFLRSNPIVIHFMQGLLLSYDAIRQCASHQTVFIREITEHMSRSGMKVKVLPDRDFPQGQVFHHQKALMREITARNHTPYVFHMCWTKDKPDKIMYLIKSNMWYMTSPCNSSDAMLKTQKEGQISLAACCLDPWA 612
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G02310.2 ID=NO14G02310.2|Name=NO14G02310.2|organism=Nannochloropsis oceanica|type=mRNA|length=2224bp
ACAGGACGAGCGCGGCTTGAGGGCATATTAACGCGACTCGCGGGAAGGTC
AGGCTGGGCCCTTCTTAGGTACCCGTCTCTGACAGCCCCTCGGCACCATC
AGACCCACTGCACAACATGAGAGGGGCTTATGCTGAACGAGGGTCCCATA
TATCACGCCCGATGCGGCAGCGGTACATAATTCACATGCTTACGCTGGTG
AGCGGGATGCTGATCGGCTTTTATGGAGCTGTGTATTTCGGTAGCATCTC
GGCCACAGGGACTGTGGGACAACATTCTTCGTTACTGGCGCACGTGCGGG
ACAAAAGGGATAAATCTGCTAGTGCCCTCGCCTCGTCCCTCGCCGTTCCA
ACTCCCTGCCCTCCCTGCGCCGCGTAAGTGCTGTAAACCTCAGTCATAAA
ACCGACGGAAGCAGGCCCCTCCGGTAACCACAATCTTTCGCACGGCCATC
CTATCCCCTAACTCACAGCTGCAAGGCATGCCGGCCCCAGCCAGACAATG
CTATTTCCGTGGATGCCCTATCAAATTATAGCGCCTCGGAAGCCGGGCGC
TCAGTCGAGACATTGAAAAAGCGCATGGGCCTGGAAATGTTCGGTTTTGT
GGATGGAAATCAAGCATCTGCCGAGTTTTTGGATTTCTTGCCGGCGAATG
TGAAAAGCGGCGTCTACAACCAATCCATGGTTCTCATGACTTCACAATCC
GGATTTAAATCCTCCCACTCCTCCTCCCTCCTCTCCTCCCGCCGTAGCCC
CGGGGACACTCTCGATTTCTCCGACCTGCAAACATGCAAAGAAGTAGATG
TCATCTCCATGGTTCAAGGCCGGTGCTATGTTGCCATCAATACTCCCCTC
AAATACTCCTCTTCGCACGTCCACCGCTACCAGCACCAACCAAGGAGCGA
AGAAAAGAAGAGCGACGAGGGAGGAAAGCAGGGGAGGGAAGCAGGGGCGG
AGGGCTGGTCGTTAGTCCCAAGGATTGCCAATGAGGGTTCCGCTCCGCCT
TCGATGCGCAATATCAGGAAGCACGAAGCGTTTTTGCTCGAGCTTTTCTC
AAATTTACCGTCTTTGGAACAAGAGGCTGAGGCATTCTTCTCGCGCGTGG
CAGACACGAAGAAACGAGTTATGGTTATGGCGTTGAATGAAGGAGATATC
GACCTGCTGGTCAACTTTGTCTGTTCTGCGAAACAGGCTGGGGTTTCATT
GAGTAATTTGGTGGTGATAGGCGCCGATCAGAGTGTGGTGGATGTTGCGA
CGAGCTTGAAGTTGCATTCTTTCTCGCATCCGGCCTTTGGGACCTTGCCG
AGCGAGCACTCCGAGTTCTACGGTGACGCCGGCTTTCAAGCGATCATGTG
GTTGAAGGTCGTGTCTGTCTGGATTGCGCTTCGCTTGGGCTATCACGTGC
TGTTCCAAGACGCCGACTTGGTGTGGTTTAAGTCTCCCTGGTCTGCGTTT
GACGATGAGAGCATCGACGGATTTTTCATGGACGATGGGGCCAGATCTGA
GAGATTTTCGCCATTATATGCGAACAGTGGTTTTTACTTTTTGAGGAGTA
ATCGAGTTGTATCTCACTTCATGCAGGGTTTGTTGTTTAGCTATGATTCC
ATTGTGCAGTACGCAAGTCACCAGACTGTGTTTATTCAAGGCCTGACGGA
GCATATTGCGAGAAATGGAATGCGGGTTAAGGTCCTGAGTAACGTGGAAT
TTCCGGGCGGGCAGATATACCATCATCGAAAGGAATTGATGAAGCAAATT
TCGGCGCGGACCTATCTCCCCTACGTCTTTCACATGTGCTGGACACGAAC
CAAGGCCGACAAGCTCTCTCAATTTATCGCCTCCGATTTATGGTATCTGA
CAACGGCCTGCAATGGCACAGATGCCACGCTCAGGAGCCAACAAGAAGGC
AAAATCAGCATCGACACATGCTGCCTAGATCCTACCGCGGACTTTGGCCC
TGTAACAAGGTGATGAGAGTAATAGAGAATGGATGGAGAAATGAACCAAG
AAAGAAAAAATGTCAATGGGTCGATACAGAGTTAAAATGATTAATTGAAG
GCGATCTGAACTCATGATCGAGATGGAGAGTGCGTGTAGTGATCCCAAAG
AAATGAGTTAATATATGGACAAAGTGGCAAAGAAAGCGTAAGTAAAGCGG
GGCGAAGCTTTGGTTTTGGTGTCACGATGAAATCTTCTTCCACGTAAAGA
AACAAGATATAGACATAACCAGGC back to topprotein sequence of NO14G02310.2 >NO14G02310.2-protein ID=NO14G02310.2-protein|Name=NO14G02310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=463bp
MGLEMFGFVDGNQASAEFLDFLPANVKSGVYNQSMVLMTSQSGFKSSHSS
SLLSSRRSPGDTLDFSDLQTCKEVDVISMVQGRCYVAINTPLKYSSSHVH
RYQHQPRSEEKKSDEGGKQGREAGAEGWSLVPRIANEGSAPPSMRNIRKH
EAFLLELFSNLPSLEQEAEAFFSRVADTKKRVMVMALNEGDIDLLVNFVC
SAKQAGVSLSNLVVIGADQSVVDVATSLKLHSFSHPAFGTLPSEHSEFYG
DAGFQAIMWLKVVSVWIALRLGYHVLFQDADLVWFKSPWSAFDDESIDGF
FMDDGARSERFSPLYANSGFYFLRSNRVVSHFMQGLLFSYDSIVQYASHQ
TVFIQGLTEHIARNGMRVKVLSNVEFPGGQIYHHRKELMKQISARTYLPY
VFHMCWTRTKADKLSQFIASDLWYLTTACNGTDATLRSQQEGKISIDTCC
LDPTADFGPVTR* back to topmRNA from alignment at chr14:691689..694470- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G02310.2 ID=NO14G02310.2|Name=NO14G02310.2|organism=Nannochloropsis oceanica|type=mRNA|length=2782bp|location=Sequence derived from alignment at chr14:691689..694470- (Nannochloropsis oceanica)
ACAGGACGAGCGCGGCTTGAGGGCATATTAACGCGACTCGCGGGAAGGTC
AGGCTGGGCCCTTCTTAGGTACCCGTCTCTGACAGCCCCTCGGCACCATC
AGACCCACTGCACAACATGAGAGGGGCTTATGCTGAACGAGGGTCCCATA
TATCACGCCCGATGCGGCAGCGGTACATAATTCACATGCTTACGCTGGTG
AGCGGGATGCTGATCGGCTTTTATGGAGCTGTGTATTTCGGTAGCATCTC
GGCCACAGGGTAAGTGAAAAGGAGGTGGAGCGCTTAATATTCTGATGCCG
GGAGGGACCCATTTGCCTCGTCGCCGCCGTCACCCACGTACTCTACTTTG
CGCATCACTATCACAATAGGACTGTGGGACAACATTCTTCGTTACTGGCG
CACGTGCGGGACAAAAGGGATAAATCTGCTAGTGCCCTCGCCTCGTCCCT
CGCCGTTCCAACTCCCTGCCCTCCCTGCGCCGCGTAAGTGCTGTAAACCT
CAGTCATAAAACCGACGGAAGCAGGCCCCTCCGGTAACCACAATCTTTCG
CACGGCCATCCTATCCCCTAACTCACAGCTGCAAGGCATGCCGGCCCCAG
CCAGACAATGCTATTTCCGTGGATGCCCTATCAAATTATAGCGCCTCGGA
AGCCGGGCGCTCAGTCGAGACATTGAAAAAGCGCATGGGCCTGGAAATGT
TCGGTTTTGTGGATGGAAATCAAGCATCTGCCGAGTTTTTGGATTTCTTG
CCGGCGAATGTGAAAGTACGTAGATAGAGCGTGTGCCGAGTGAGGGAGAG
GAGGGGGACAGTATGCTGTCCTTTCAGGTTCAAAGTCGGGCGCTTCTTAT
TTCAAGTCACGTACGGCCTTCTAATGTTCTCATCCTCGATTTCCATGTCT
TTTTGGCATTCTACAGAGCGGCGTCTACAACCAATCCATGGTTCTCATGA
CTTCACAATCCGGATTTAAATCCTCCCACTCCTCCTCCCTCCTCTCCTCC
CGCCGTAGCCCCGGGGACACTCTCGATTTCTCCGACCTGCAAACATGCAA
AGAAGTAGATGTCATCTCCATGGTTCAAGGCCGGTGCTATGTTGCCATCA
ATACTCCCCTCAAATACTCCTCTTCGCACGTCCACCGCTACCAGCACCAA
CCAAGGAGCGAAGAAAAGAAGAGCGACGAGGGAGGAAAGCAGGGGAGGGA
AGCAGGGGCGGAGGGCTGGTCGTTAGTCCCAAGGATTGCCAATGAGGGTT
CCGCTCCGCCTTCGATGCGCAATATCAGGAAGCACGAAGCGTTTTTGCTC
GAGCTTTTCTCAAATTTACCGTCTTTGGAACAAGAGGCTGAGGCATTCTT
CTCGCGCGTGGCAGACACGAAGAAACGAGTTATGGTTATGGCGTTGAATG
AAGGAGATATCGACCTGCTGGTCAACTTTGTCTGTTCTGCGAAACAGGCT
GGGGTTTCATTGAGTAATTTGGTGGTGATAGGCGCCGATCAGAGTGTGGT
GGATGTTGCGACGAGCTTGAAGTTGCATTCTTTCTCGCATCCGGCCTTTG
GGACCTTGCCGAGCGAGCACTCCGAGTTGTAAGTCGGTGGGAAGGGAGAG
GAGAAGGGGAGGAGGGGGAGGGGGAGCTTGCACCTGTTACTTTGTCTTTG
CCTTCCGCTCTCATTATCTCTATTTTGACGGTACCCGCTTGCTCCCTCCC
TCCTTCCCTCCCTCCCCTTCCTAACTTTCTCAGCTACGGTGACGCCGGCT
TTCAAGCGATCATGTGGTTGAAGGTCGTGTCTGTCTGGATTGCGCTTCGC
TTGGGCTATCACGTGCTGTTCCAAGACGCCGACTTGGTGTGGTTTAAGTC
TCCCTGGTCTGCGTTTGACGATGAGAGCATCGACGGATTTTTCATGGACG
ATGGGGCCAGATCTGAGAGATTTTCGCCATTATATGCGAACAGTGGTTTT
TACTTTTTGAGGAGTAATCGAGTTGTATCTCACTTCATGCAGGGTTTGTT
GTTTAGCTATGATTCCATTGTGCAGTACGCAAGTCACCAGACTGTGTTTA
TTCAAGGCCTGACGGAGCATATTGCGAGAAATGGAATGCGGGTTAAGGTC
CTGAGTAACGTGGAATTTCCGGGCGGGCAGATATACCATCATCGAAAGGA
ATTGATGAAGCAAATTTCGGGTAAGTTGGAGGGCGGAGAGAGAGGAAGGA
GGGGAGGGAGGGAAAGGTTCTATTGGTTTTTGACTGTCTCTTTATCGCGC
GTCGCACCTCCACTAACACACGCATATACTCTTTCAAACTGATATAACAC
GCACATTCAAAGCGCGGACCTATCTCCCCTACGTCTTTCACATGTGCTGG
ACACGAACCAAGGCCGACAAGCTCTCTCAATTTATCGCCTCCGATTTATG
GTATCTGACAACGGCCTGCAATGGCACAGATGCCACGCTCAGGAGCCAAC
AAGAAGGCAAAATCAGCATCGACACATGCTGCCTAGATCCTACCGCGGAC
TTTGGCCCTGTAACAAGGTGATGAGAGTAATAGAGAATGGATGGAGAAAT
GAACCAAGAAAGAAAAAATGTCAATGGGTCGATACAGAGTTAAAATGATT
AATTGAAGGCGATCTGAACTCATGATCGAGATGGAGAGTGCGTGTAGTGA
TCCCAAAGAAATGAGTTAATATATGGACAAAGTGGCAAAGAAAGCGTAAG
TAAAGCGGGGCGAAGCTTTGGTTTTGGTGTCACGATGAAATCTTCTTCCA
CGTAAAGAAACAAGATATAGACATAACCAGGC back to topCoding sequence (CDS) from alignment at chr14:691689..694470- >NO14G02310.2 ID=NO14G02310.2|Name=NO14G02310.2|organism=Nannochloropsis oceanica|type=CDS|length=1389bp|location=Sequence derived from alignment at chr14:691689..694470- (Nannochloropsis oceanica)
ATGGGCCTGGAAATGTTCGGTTTTGTGGATGGAAATCAAGCATCTGCCGA
GTTTTTGGATTTCTTGCCGGCGAATGTGAAAAGCGGCGTCTACAACCAAT
CCATGGTTCTCATGACTTCACAATCCGGATTTAAATCCTCCCACTCCTCC
TCCCTCCTCTCCTCCCGCCGTAGCCCCGGGGACACTCTCGATTTCTCCGA
CCTGCAAACATGCAAAGAAGTAGATGTCATCTCCATGGTTCAAGGCCGGT
GCTATGTTGCCATCAATACTCCCCTCAAATACTCCTCTTCGCACGTCCAC
CGCTACCAGCACCAACCAAGGAGCGAAGAAAAGAAGAGCGACGAGGGAGG
AAAGCAGGGGAGGGAAGCAGGGGCGGAGGGCTGGTCGTTAGTCCCAAGGA
TTGCCAATGAGGGTTCCGCTCCGCCTTCGATGCGCAATATCAGGAAGCAC
GAAGCGTTTTTGCTCGAGCTTTTCTCAAATTTACCGTCTTTGGAACAAGA
GGCTGAGGCATTCTTCTCGCGCGTGGCAGACACGAAGAAACGAGTTATGG
TTATGGCGTTGAATGAAGGAGATATCGACCTGCTGGTCAACTTTGTCTGT
TCTGCGAAACAGGCTGGGGTTTCATTGAGTAATTTGGTGGTGATAGGCGC
CGATCAGAGTGTGGTGGATGTTGCGACGAGCTTGAAGTTGCATTCTTTCT
CGCATCCGGCCTTTGGGACCTTGCCGAGCGAGCACTCCGAGTTCTACGGT
GACGCCGGCTTTCAAGCGATCATGTGGTTGAAGGTCGTGTCTGTCTGGAT
TGCGCTTCGCTTGGGCTATCACGTGCTGTTCCAAGACGCCGACTTGGTGT
GGTTTAAGTCTCCCTGGTCTGCGTTTGACGATGAGAGCATCGACGGATTT
TTCATGGACGATGGGGCCAGATCTGAGAGATTTTCGCCATTATATGCGAA
CAGTGGTTTTTACTTTTTGAGGAGTAATCGAGTTGTATCTCACTTCATGC
AGGGTTTGTTGTTTAGCTATGATTCCATTGTGCAGTACGCAAGTCACCAG
ACTGTGTTTATTCAAGGCCTGACGGAGCATATTGCGAGAAATGGAATGCG
GGTTAAGGTCCTGAGTAACGTGGAATTTCCGGGCGGGCAGATATACCATC
ATCGAAAGGAATTGATGAAGCAAATTTCGGCGCGGACCTATCTCCCCTAC
GTCTTTCACATGTGCTGGACACGAACCAAGGCCGACAAGCTCTCTCAATT
TATCGCCTCCGATTTATGGTATCTGACAACGGCCTGCAATGGCACAGATG
CCACGCTCAGGAGCCAACAAGAAGGCAAAATCAGCATCGACACATGCTGC
CTAGATCCTACCGCGGACTTTGGCCCTGTAACAAGGTGA back to top
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