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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:470948..474096 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G01490.1 vs.
Match: EWM24668.1 (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 978.0 bits (2527), Expect = 1.500e-281 Identity = 479/537 (89.20%), Postives = 509/537 (94.79%), Query Frame = 0
Query: 137 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRDPTGEFFTLSVLVHQKELLFGFMTPREHLLFHAIARMSRTHTSKQIHDRVEEVLKDVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPLLIFLDEPSSGLDSVMSDSIFATMKDLTQQGRIVMASVHCPSSEMCQQFTHILLLTCDGRLAYHGRQDAAIKYFNSMGYRCPDNYNPADFYLKLISATPGADPVEEKMRMNNLVVTYNASDMVRKNPLAADESHKQFQMVFSQVSSWTLFKINLWRAFIQLQRDWVTFILWGVVSAIVGGLFGVLYWQQARTNWRNLLGLLFSVVVANLFTASLAVMMRFPLDWAIVVREYFSGSNAIGPYLCARFIVDAPMAYGPFLLITLLYWMTGMDSDIRKFIIFALTFISGNWAASSMGMFVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPDWLSWLQTLSLVNYTFSALMIQQIHILPKPLALLVMQFVELNPGDMGWDIAMLWIMNFGFQVLTYINLSLRLRFATG 674
MGPSGAGKTTLLECISLRNRKFEGAVHYDNR PTGEFFT SVLVHQKELLFGFMTPREHLLFHAIARMS+ HT +QI+ RVEEVL++VKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAP LIFLDEPSSGLDSVMS+SIF T+KDLTQ GRIV+ASVHCPSSEMCQQFTH+LLLT DGRLAYHGRQDAAI+YF+S+ Y+CP+NYNP+DFYLKLISATPGADP +EK RMN LV YNASDMVRK PLA DE+HKQFQMVF SSWTLFKINLWRAFIQLQRDWVTF+LWG+VSA+VGGLFG+LYWQQAR+NWRNLLGLLFSVVVANLFT+SLAVMMRFPLDWAIVVREYFSGSNAIGPYL ARFIVDAPM YGPFLLITLLYWMTGMDSDI KF+IFALTFISGNWA++SMG +VSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVP WLSWLQTLS+VNY+FSALMIQQIHILPKPLALLVMQFVELNP MGWDI MLWIMNFGFQ+LTYINLSLRLRFATG
Sbjct: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGHASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFATG 537
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G01490.1 ID=NO14G01490.1|Name=NO14G01490.1|organism=Nannochloropsis oceanica|type=mRNA|length=2855bp TGGACATCCCTGGCCCACAGTCGAGAGTGCGAACATGTACATTTACCCTC CTGCTCCCGTAATGTAACTCTGTGCTGTGTGTTCGTAAAGTTTCTAGTTC TTGGTTCCTTTGGGCGTCAAGACACGGGTGTCTCGCCGGCAGAGCGCCTT GGGTCCTTCATGCATTTCAGGCCCATCCCTCAAGGAACACGCACGCATCA AACGACCAGTCCTCAGCTCTTCTCTGGCCTGAAGACGAACGAGAAAGGAA CCCTACCCTTGATCCTGACTAGCCAAAAGCTTAAAGCATGTTTTGGGCGC CACACTCACGCACACCCCTTCACCCATATTACACATACCACAGTGATAAT GGCAGGTCTTGAACTCAAGGCTCCGCCTGCGGCGGAGGTGACGTCTATGC CTCTGCCCAATTGCAAGGGCAACGGCGACAAAAAATATTCCATCGACATG GGTGCCCATTCCCTCGAGTGGAATGTGACAAGCTTTCAAGTCGGCAACGG CAAGAGCAAGAAGAACATCCTCAACCTCGTTGCCGGAAAGACCCGCAGCG GCGAGCTGACGGCCATCATGGGCCCCTCAGGTGCAGGCAAGACGACACTC TTAGAGTGTATCTCCCTCCGCAACCGCAAATTTGAGGGAGCCGTGCACTA CGACAATCGCGACCCCACGGGGGAGTTCTTCACATTATCCGTGCTCGTCC ACCAGAAGGAGCTGTTGTTTGGGTTCATGACCCCCCGGGAGCACTTGCTC TTCCACGCCATTGCCCGCATGAGTAGGACGCACACCAGCAAGCAGATTCA CGACCGTGTCGAGGAGGTCCTGAAGGACGTCAAGCTTGAGAAATGCGCAG ACACAATCGTTGGTGGCACCGACCCTATCTATATGCGCAAAGGCCTGTCG GGCGGGGAGCGAAAGCGCCTCTCCATCGCTGCCGAGCTTCTGCTTGCCCC CCTCCTTATCTTTTTGGATGAGCCTTCATCCGGCCTGGACTCTGTGATGT CAGATTCTATCTTTGCGACCATGAAGGACCTGACCCAGCAGGGGCGGATC GTCATGGCCTCGGTGCATTGCCCGTCCTCGGAAATGTGCCAGCAGTTCAC TCACATTCTCCTCCTCACCTGCGACGGCCGTCTCGCCTATCATGGCCGGC AGGACGCGGCCATCAAGTACTTCAATTCTATGGGTTACCGGTGCCCCGAC AACTACAACCCAGCCGACTTCTACCTCAAGCTCATCTCGGCCACCCCCGG CGCAGACCCTGTCGAGGAGAAGATGCGCATGAACAATCTGGTGGTGACCT ACAACGCCTCGGACATGGTCCGCAAGAACCCCCTGGCGGCCGACGAGAGC CATAAACAGTTTCAGATGGTATTCAGCCAAGTCAGCAGCTGGACACTTTT CAAGATCAATCTGTGGCGGGCATTCATTCAGCTGCAGCGCGATTGGGTCA CATTTATCTTGTGGGGCGTGGTTTCGGCTATCGTTGGCGGACTATTCGGC GTGTTGTACTGGCAGCAGGCCCGCACCAATTGGCGCAACCTGCTTGGTTT GCTCTTCTCGGTGGTGGTGGCAAACCTGTTCACTGCCTCCTTGGCCGTGA TGATGCGCTTCCCGCTGGACTGGGCGATTGTCGTGAGGGAGTACTTCTCA GGTTCGAATGCCATTGGCCCCTACCTGTGCGCACGCTTTATCGTGGACGC CCCCATGGCCTACGGACCCTTTCTACTTATCACCCTATTGTACTGGATGA CGGGCATGGATTCGGACATCCGCAAGTTTATCATCTTCGCGCTCACCTTC ATCTCGGGCAACTGGGCCGCCTCCTCCATGGGGATGTTCGTCTCCTCCTT CTCTGCCAATCCCTTCATCGGTCTGACCATCCTCCCCGCCTTTGTCGCGC CCATGATCATGTTCTCTGGTATTCTGTACGAACGATCTTCTGTGCCGGAT TGGTTGAGCTGGCTGCAGACCCTGTCCCTCGTCAACTACACGTTTTCTGC ACTCATGATCCAGCAGATCCACATCCTGCCCAAGCCTTTGGCTCTCCTCG TCATGCAATTCGTGGAGCTCAATCCCGGTGACATGGGCTGGGACATTGCC ATGCTATGGATCATGAACTTCGGTTTCCAGGTCCTCACCTACATCAATCT CTCACTCCGCCTCCGATTCGCCACAGGATAAAGCTAGACGGTTGGAAAGA AGGGGAAAGAGGAATCGAGGGATGAAGGACACTATAGTAGCAGCAGCGTG TTAAATGGACAAGTGAGAAGGCTAGAGAAGGCTAAGGCACCAATCAAATC CGAAGGGGTGCAGGAGAGTGGTACGAGGGGTTAGAATTCAGTTTCAAAAA GGATTAGTGTGAGAAGAAAGAGGTGTGTGAGGAGAAAGAGGAAAAGAGAA TCGGACAAAGAGAGAGCGAGAGGAGGAGAAAGAGAGGGAGGGAGGGGGCG GGGGCTGGAAGTTTGGAAATGTGAAAAGAGATAGCGACACATTTTCCCTC CTTGATCAGCAGCAGCAGTCCCTTCTATTTCATCATCAAGGATAGATTCA ACATCATCACCATGTCACCCACAAAGTATATTAAATGCAAAGCAAGGAGA ATTATAAGACGCCGCATCTCATCTTATCTTCTGCGCATTTCTAAATCATT CTCCATGCAGTTGTAGCAGGAGCTCCCGGGATCCTCATAGCCCCAAGGTG GGGCTATTCCTGTCCAATGAAGCAGCGAATTACTCCACTTGATAAGTGGA CAAAGAGAGGAAGGGAATTTGGGGGAAAAGGAAGCATGCAAACGGCAAAC AAACTTCTTGTGGAATGCAAGATGTAAAGAAACAACAGTACCCAGCGAAT ATGTC back to topprotein sequence of NO14G01490.1 >NO14G01490.1-protein ID=NO14G01490.1-protein|Name=NO14G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=674bp MHFRPIPQGTRTHQTTSPQLFSGLKTNEKGTLPLILTSQKLKACFGRHTH AHPFTHITHTTVIMAGLELKAPPAAEVTSMPLPNCKGNGDKKYSIDMGAH SLEWNVTSFQVGNGKSKKNILNLVAGKTRSGELTAIMGPSGAGKTTLLEC ISLRNRKFEGAVHYDNRDPTGEFFTLSVLVHQKELLFGFMTPREHLLFHA IARMSRTHTSKQIHDRVEEVLKDVKLEKCADTIVGGTDPIYMRKGLSGGE RKRLSIAAELLLAPLLIFLDEPSSGLDSVMSDSIFATMKDLTQQGRIVMA SVHCPSSEMCQQFTHILLLTCDGRLAYHGRQDAAIKYFNSMGYRCPDNYN PADFYLKLISATPGADPVEEKMRMNNLVVTYNASDMVRKNPLAADESHKQ FQMVFSQVSSWTLFKINLWRAFIQLQRDWVTFILWGVVSAIVGGLFGVLY WQQARTNWRNLLGLLFSVVVANLFTASLAVMMRFPLDWAIVVREYFSGSN AIGPYLCARFIVDAPMAYGPFLLITLLYWMTGMDSDIRKFIIFALTFISG NWAASSMGMFVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPDWLS WLQTLSLVNYTFSALMIQQIHILPKPLALLVMQFVELNPGDMGWDIAMLW IMNFGFQVLTYINLSLRLRFATG* back to topmRNA from alignment at chr14:470948..474096- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G01490.1 ID=NO14G01490.1|Name=NO14G01490.1|organism=Nannochloropsis oceanica|type=mRNA|length=3149bp|location=Sequence derived from alignment at chr14:470948..474096- (Nannochloropsis oceanica) TGGACATCCCTGGCCCACAGTCGAGAGTGCGAACATGTACATTTACCCTC
CTGCTCCCGTAATGTAACTCTGTGCTGTGTGTTCGTAAAGTTTCTAGTTC
TTGGTTCCTTTGGGCGTCAAGACACGGGTGTCTCGCCGGCAGAGCGCCTT
GGGTCCTTCATGCATTTCAGGCCCATCCCTCAAGGAACACGCACGCATCA
AACGACCAGTCCTCAGCTCTTCTCTGGCCTGAAGACGAACGAGAAAGGAA
CCCTACCCTTGATCCTGACTAGCCAAAAGCTTAAAGCATGTTTTGGGCGC
CACACTCACGCACACCCCTTCACCCATATTACACATACCACAGTGATAAT
GGCAGGTCTTGAACTCAAGGCTCCGCCTGCGGCGGAGGTGACGTCTATGC
CTCTGCCCAATTGCAAGGGCAACGGCGACAAAAAATATTCCATCGACATG
GGTGCCCATTCCCTCGAGTGGAATGTGACAAGCTTTCAAGTCGGCAACGG
CAAGAGCAAGAAGAACATCCTCAACCTCGTTGGTACGTCTATATGCGGAT
TGTTTGATTAAGGGTGGGGGGGTCATGCGTATCCCATGAGATATAAGAAC
CTCCAAAACCTCGTTGGTACGTCTATATGTGGAGTGTCTGATGGAGGGGG
GGGGGGGTATATGCGTATCACCTGAGATATGTACCCCTTCCCTTCCACCG
TCAACACAAGGTGCCGATGCGGGTCACTCCCTTCTCTCTTCTTCTTTTAA
TTCCACTCGCTCAAACACGACGCTCCCATCTGCTCCGCCTTCTCACTCCT
ATCTTTTCTCTCTCCCTCCCCTATAGCCGGAAAGACCCGCAGCGGCGAGC
TGACGGCCATCATGGGCCCCTCAGGTGCAGGCAAGACGACACTCTTAGAG
TGTATCTCCCTCCGCAACCGCAAATTTGAGGGAGCCGTGCACTACGACAA
TCGCGACCCCACGGGGGAGTTCTTCACATTATCCGTGCTCGTCCACCAGA
AGGAGCTGTTGTTTGGGTTCATGACCCCCCGGGAGCACTTGCTCTTCCAC
GCCATTGCCCGCATGAGTAGGACGCACACCAGCAAGCAGATTCACGACCG
TGTCGAGGAGGTCCTGAAGGACGTCAAGCTTGAGAAATGCGCAGACACAA
TCGTTGGTGGCACCGACCCTATCTATATGCGCAAAGGCCTGTCGGGCGGG
GAGCGAAAGCGCCTCTCCATCGCTGCCGAGCTTCTGCTTGCCCCCCTCCT
TATCTTTTTGGATGAGCCTTCATCCGGCCTGGACTCTGTGATGTCAGATT
CTATCTTTGCGACCATGAAGGACCTGACCCAGCAGGGGCGGATCGTCATG
GCCTCGGTGCATTGCCCGTCCTCGGAAATGTGCCAGCAGTTCACTCACAT
TCTCCTCCTCACCTGCGACGGCCGTCTCGCCTATCATGGCCGGCAGGACG
CGGCCATCAAGTACTTCAATTCTATGGGTTACCGGTGCCCCGACAACTAC
AACCCAGCCGACTTCTACCTCAAGCTCATCTCGGCCACCCCCGGCGCAGA
CCCTGTCGAGGAGAAGATGCGCATGAACAATCTGGTGGTGACCTACAACG
CCTCGGACATGGTCCGCAAGAACCCCCTGGCGGCCGACGAGAGCCATAAA
CAGTTTCAGATGGTATTCAGCCAAGTCAGCAGCTGGACACTTTTCAAGAT
CAATCTGTGGCGGGCATTCATTCAGCTGCAGCGCGATTGGGTCACATTTA
TCTTGTGGGGCGTGGTTTCGGCTATCGTTGGCGGACTATTCGGCGTGTTG
TACTGGCAGCAGGCCCGCACCAATTGGCGCAACCTGCTTGGTTTGCTCTT
CTCGGTGGTGGTGGCAAACCTGTTCACTGCCTCCTTGGCCGTGATGATGC
GCTTCCCGCTGGACTGGGCGATTGTCGTGAGGGAGTACTTCTCAGGTTCG
AATGCCATTGGCCCCTACCTGTGCGCACGCTTTATCGTGGACGCCCCCAT
GGCCTACGGACCCTTTCTACTTATCACCCTATTGTACTGGATGACGGGCA
TGGATTCGGACATCCGCAAGTTTATCATCTTCGCGCTCACCTTCATCTCG
GGCAACTGGGCCGCCTCCTCCATGGGGATGTTCGTCTCCTCCTTCTCTGC
CAATCCCTTCATCGGTCTGACCATCCTCCCCGCCTTTGTCGCGCCCATGA
TCATGTTCTCTGGTATTCTGTACGAACGATCTTCTGTGCCGGATTGGTTG
AGCTGGCTGCAGACCCTGTCCCTCGTCAACTACACGTTTTCTGCACTCAT
GATCCAGCAGATCCACATCCTGCCCAAGCCTTTGGCTCTCCTCGTCATGC
AATTCGTGGAGCTCAATCCCGGTGACATGGGCTGGGACATTGCCATGCTA
TGGATCATGAACTTCGGTTTCCAGGTCCTCACCTACATCAATCTCTCACT
CCGCCTCCGATTCGCCACAGGATAAAGCTAGACGGTTGGAAAGAAGGGGA
AAGAGGAATCGAGGGATGAAGGACACTATAGTAGCAGCAGCGTGTTAAAT
GGACAAGTGAGAAGGCTAGAGAAGGCTAAGGCACCAATCAAATCCGAAGG
GGTGCAGGAGAGTGGTACGAGGGGTTAGAATTCAGTTTCAAAAAGGATTA
GTGTGAGAAGAAAGAGGTGTGTGAGGAGAAAGAGGAAAAGAGAATCGGAC
AAAGAGAGAGCGAGAGGAGGAGAAAGAGAGGGAGGGAGGGGGCGGGGGCT
GGAAGTTTGGAAATGTGAAAAGAGATAGCGACACATTTTCCCTCCTTGAT
CAGCAGCAGCAGTCCCTTCTATTTCATCATCAAGGATAGATTCAACATCA
TCACCATGTCACCCACAAAGTATATTAAATGCAAAGCAAGGAGAATTATA
AGACGCCGCATCTCATCTTATCTTCTGCGCATTTCTAAATCATTCTCCAT
GCAGTTGTAGCAGGAGCTCCCGGGATCCTCATAGCCCCAAGGTGGGGCTA
TTCCTGTCCAATGAAGCAGCGAATTACTCCACTTGATAAGTGGACAAAGA
GAGGAAGGGAATTTGGGGGAAAAGGAAGCATGCAAACGGCAAACAAACTT
CTTGTGGAATGCAAGATGTAAAGAAACAACAGTACCCAGCGAATATGTC back to topCoding sequence (CDS) from alignment at chr14:470948..474096- >NO14G01490.1 ID=NO14G01490.1|Name=NO14G01490.1|organism=Nannochloropsis oceanica|type=CDS|length=2022bp|location=Sequence derived from alignment at chr14:470948..474096- (Nannochloropsis oceanica) ATGCATTTCAGGCCCATCCCTCAAGGAACACGCACGCATCAAACGACCAG TCCTCAGCTCTTCTCTGGCCTGAAGACGAACGAGAAAGGAACCCTACCCT TGATCCTGACTAGCCAAAAGCTTAAAGCATGTTTTGGGCGCCACACTCAC GCACACCCCTTCACCCATATTACACATACCACAGTGATAATGGCAGGTCT TGAACTCAAGGCTCCGCCTGCGGCGGAGGTGACGTCTATGCCTCTGCCCA ATTGCAAGGGCAACGGCGACAAAAAATATTCCATCGACATGGGTGCCCAT TCCCTCGAGTGGAATGTGACAAGCTTTCAAGTCGGCAACGGCAAGAGCAA GAAGAACATCCTCAACCTCGTTGCCGGAAAGACCCGCAGCGGCGAGCTGA CGGCCATCATGGGCCCCTCAGGTGCAGGCAAGACGACACTCTTAGAGTGT ATCTCCCTCCGCAACCGCAAATTTGAGGGAGCCGTGCACTACGACAATCG CGACCCCACGGGGGAGTTCTTCACATTATCCGTGCTCGTCCACCAGAAGG AGCTGTTGTTTGGGTTCATGACCCCCCGGGAGCACTTGCTCTTCCACGCC ATTGCCCGCATGAGTAGGACGCACACCAGCAAGCAGATTCACGACCGTGT CGAGGAGGTCCTGAAGGACGTCAAGCTTGAGAAATGCGCAGACACAATCG TTGGTGGCACCGACCCTATCTATATGCGCAAAGGCCTGTCGGGCGGGGAG CGAAAGCGCCTCTCCATCGCTGCCGAGCTTCTGCTTGCCCCCCTCCTTAT CTTTTTGGATGAGCCTTCATCCGGCCTGGACTCTGTGATGTCAGATTCTA TCTTTGCGACCATGAAGGACCTGACCCAGCAGGGGCGGATCGTCATGGCC TCGGTGCATTGCCCGTCCTCGGAAATGTGCCAGCAGTTCACTCACATTCT CCTCCTCACCTGCGACGGCCGTCTCGCCTATCATGGCCGGCAGGACGCGG CCATCAAGTACTTCAATTCTATGGGTTACCGGTGCCCCGACAACTACAAC CCAGCCGACTTCTACCTCAAGCTCATCTCGGCCACCCCCGGCGCAGACCC TGTCGAGGAGAAGATGCGCATGAACAATCTGGTGGTGACCTACAACGCCT CGGACATGGTCCGCAAGAACCCCCTGGCGGCCGACGAGAGCCATAAACAG TTTCAGATGGTATTCAGCCAAGTCAGCAGCTGGACACTTTTCAAGATCAA TCTGTGGCGGGCATTCATTCAGCTGCAGCGCGATTGGGTCACATTTATCT TGTGGGGCGTGGTTTCGGCTATCGTTGGCGGACTATTCGGCGTGTTGTAC TGGCAGCAGGCCCGCACCAATTGGCGCAACCTGCTTGGTTTGCTCTTCTC GGTGGTGGTGGCAAACCTGTTCACTGCCTCCTTGGCCGTGATGATGCGCT TCCCGCTGGACTGGGCGATTGTCGTGAGGGAGTACTTCTCAGGTTCGAAT GCCATTGGCCCCTACCTGTGCGCACGCTTTATCGTGGACGCCCCCATGGC CTACGGACCCTTTCTACTTATCACCCTATTGTACTGGATGACGGGCATGG ATTCGGACATCCGCAAGTTTATCATCTTCGCGCTCACCTTCATCTCGGGC AACTGGGCCGCCTCCTCCATGGGGATGTTCGTCTCCTCCTTCTCTGCCAA TCCCTTCATCGGTCTGACCATCCTCCCCGCCTTTGTCGCGCCCATGATCA TGTTCTCTGGTATTCTGTACGAACGATCTTCTGTGCCGGATTGGTTGAGC TGGCTGCAGACCCTGTCCCTCGTCAACTACACGTTTTCTGCACTCATGAT CCAGCAGATCCACATCCTGCCCAAGCCTTTGGCTCTCCTCGTCATGCAAT TCGTGGAGCTCAATCCCGGTGACATGGGCTGGGACATTGCCATGCTATGG ATCATGAACTTCGGTTTCCAGGTCCTCACCTACATCAATCTCTCACTCCG CCTCCGATTCGCCACAGGATAA back to top
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