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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:252643..255763 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G00700.1 vs.
Match: EWM24717.1 (hypothetical protein Naga_100978g4, partial [Nannochloropsis gaditana]) HSP 1 Score: 148.3 bits (373), Expect = 9.600e-32 Identity = 74/120 (61.67%), Postives = 93/120 (77.50%), Query Frame = 0
Query: 1 MVLQSIVDRLKGAREVTIKRLYKLVLRKALGNFLAGQLGVDQLDVKLIVLED----TPSSPGTFPSSTRQGCVQLTDLEINVDPLNGFLASQPLQLHKGRIGKVEVTVCYEKLLTEGLRI 117
MVLQ+ VDRL+G +E+T+KRLYK VL+KALG FLAGQLGVDQLDVK IVLED P SPG P+ R+G VQL D+ +NV+ +N L QP +LH+GR+GKVEV VCYE++L EG+ +
Sbjct: 1 MVLQAFVDRLRGVQEITVKRLYKFVLKKALGKFLAGQLGVDQLDVKFIVLEDDTTSAPPSPGAPPA--RRGYVQLRDIVMNVEAVNALLTDQPFKLHRGRLGKVEVRVCYEQVLREGMEV 118
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G00700.1 ID=NO14G00700.1|Name=NO14G00700.1|organism=Nannochloropsis oceanica|type=mRNA|length=2741bp GTGCTGTCATGTGGGAGAGTGGGAGAGAAGCAATAGAAGCATATGCCCGG CGAGTCCTTTCTTTTTTTTCACTTTCATCACACCACCAACCGGGGCCCGG GAGCGCAAGCACGTGCACTCTCTGCCCTGGACCCAGCACACCATCACGAA TAACAGTCGGTTACCATGCGTATGCAGGCCATGTCGCGGCAATTGTTCAC GTTGCTGCAAGAGAGACAGATCGTGAAGGCGTTGCAGCAGCGAAGAGCAA ATGCCTTCACGCTTCTCTCACGCGTGTCCCCCTCCTTCTAAGCACAGGTA GCCGCAGGGGCAAGAGGAGCAGTACCACGCACCACCCCTTTCTCTTTTCA ATCGTACAACAGCCAGGACGGGGACCACGGGCCATGATCTAGACGAACAA CAATCAGCATCAGTAGGATCAGTAGGATCAGTAGGATCAATAGCAGTGCA GTGCTGGACCTCTCCTGAAAACTACAACCCCAACAAAAATGGTGCTCCAA AGCATAGTCGACCGGCTGAAAGGAGCCCGCGAAGTAACGATCAAGCGGTT GTATAAATTAGTCCTCCGCAAAGCCCTGGGCAATTTCCTAGCAGGTCAGC TGGGGGTCGATCAGCTCGACGTAAAGCTCATCGTCCTTGAGGACACCCCT TCCTCCCCCGGTACCTTCCCCTCATCCACCCGGCAAGGCTGTGTACAATT AACTGATTTAGAGATAAATGTTGACCCGTTAAATGGTTTTTTGGCGTCTC AACCATTGCAATTGCATAAAGGGAGGATTGGGAAGGTGGAAGTGACAGTG TGTTATGAGAAGCTGTTGACAGAAGGGCTTAGGATTGTTCTGGAAGATGT CGAGTTGGTATTGGTGCGACGCAAACCAGAAAAGGGTGATGAGAAGGGAA GAAATATTGGGAGAGTGGCAGAGGTGAGGAGGAAGACGAAAAGGGAGGAG GAGAAGGAGAAGATGGAAATGGTGGAGGCCAAGGCGAAAGAGGCGGCCAA CAGGAGGAGGAGCAGTAGCAGCAGCAGGGGCAGTGAAGATGCTAGCATTA TCGCAGAATGGATCGAACAGATCACGACGCAGCTTCGCGTGGAGGTGAAG GGATTGAAGGTCCGCCTCGTGGAAGATCCCGCCCAAACGTCCGCCCCGTC CTTGTCTTTGCTTGTCCGTCGTGCGCACTACGAAGACGTCACGGCCAGAT ATCGAGGGGGAGGGGGCGGGAGGGAAGGAGGAGGGGACGCGGATGGTCTC ACTGGCCCCTCTCTCCCGCCCTCCTCCTCCTGGGAGGTGTCGCATAAGCG AGTGCGGTTCGAAGGTGTGGAGGTGTGGTTGGAACGAGGGAGGGAGGGGA GGGGGCCACCGTTTGCGGCACTGGGAAGAGGAGGGGGAGGAGGAGGGAAA GGAAGAAGAAGAGGAGGGCGACACCTAAATAATGGGAATGGACAGAGCGA GGAGGAGGAGGAGGAGGAGGAGGACGACGAAAATTCCATCAGTGCAACTG CCTCTTCCTTTCCTCCCCCCCGCCCGTCCTTCTCCTCCTCCTCCTCCTCC CTCCGCCTGTTGGAAGTAACGGACGAGGGTCAGTTGGACGTTAAGATCGG GCATTCCACTCGTCCGGCCCAAGCCGCCAAGCTGGACTTCCGTCTGCAGA TCAAGCACATCCTTCTTTCCGTCTCCCCCTCCCTCCTTCAAGACCTCCTT TTTCTCTACTCCTCTTGCTCTGCCTTCCCGGGAAAGGACACGAGGGAGGG AGGGAGGGAGGGAGGGAGGGAGGGAGGGCTCTTTGCTTGGCATGGCGACG AGAGGGACGTACCGGACGTGGGAGGGTTAGACTTTGATGAGGTTGAGAAG GCCTTGGAAGACTATGGAAGGTACAGGGGATTGGTGCCCAGGGAGGGAGG GGGGAAGGAGGAGAAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAAG GATTATTTTTCGATTGTGTGAATGGGGTGGAAACCGCGCTGTGGGAGAGC ATGCATAGGGAGGAGGGGGAGGGAGGGAGGGAGGGAGGGAGGGGCGGAAG GACCGAGGGATCTTCATTGAGGTTACGTGTTGATGTCGTTGGAGGGACGC TGCTGGCGTTCGCTTCCGATGATGGGGTGGGTGGGATGGTGGGAGGGAGG GAGGGAAGACAGGAGGAAGGGCAACGAGCACGCCTCCAAACCACCACCAC CAACACCACTGCTGCTGCTGCTGCTGATGCTGCTGCTGCTGATAATAATG ATGATGATGGTGATGATGAGAGAGATGTTTGTCGTACTGCTGCTGTTCCT TGTCTGAGGGTGGAATGGCAAGAGTTGCTGGCGGCTACTGGACCAGTGGG CCTGGAGAAGGTGACCACTGCCTTCTCGGTGGGAGGGCTGCGGGTCGTCG AGGAGGGAGGGAAGGAGGGCGGGCGGGTGTGGCTTGGGTTTGAGGCGATG GACGAGGAGGATGGGAGGGGGAGGAAGGGGGGGAGGAAGGGGGAGAGGAG CGGGGGCGTCTTTGTTGCTTCTTCACTGGTGCCGCTGGATGGGACCATTG ATGCCTTTCGACTTCCTCCTTCCTCCTCCTCCCTCCCTTCCTCCTTACCT TCCTCAATGTCGATTTCCGTTAAAATTAGCGTTCGGCCGTTTCACACGGA CGTCAATGTCGGGAAATTCAAGCGTTGGGTGGGACTGTACAGTGGGGCGA TGGGAGGGGGGGAGGGAGGGGGGAAGGGAGGGGGGGGGTAA back to topprotein sequence of NO14G00700.1 >NO14G00700.1-protein ID=NO14G00700.1-protein|Name=NO14G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=751bp MVLQSIVDRLKGAREVTIKRLYKLVLRKALGNFLAGQLGVDQLDVKLIVL EDTPSSPGTFPSSTRQGCVQLTDLEINVDPLNGFLASQPLQLHKGRIGKV EVTVCYEKLLTEGLRIVLEDVELVLVRRKPEKGDEKGRNIGRVAEVRRKT KREEEKEKMEMVEAKAKEAANRRRSSSSSRGSEDASIIAEWIEQITTQLR VEVKGLKVRLVEDPAQTSAPSLSLLVRRAHYEDVTARYRGGGGGREGGGD ADGLTGPSLPPSSSWEVSHKRVRFEGVEVWLERGREGRGPPFAALGRGGG GGGKGRRRGGRHLNNGNGQSEEEEEEEEDDENSISATASSFPPPRPSFSS SSSSLRLLEVTDEGQLDVKIGHSTRPAQAAKLDFRLQIKHILLSVSPSLL QDLLFLYSSCSAFPGKDTREGGREGGREGGLFAWHGDERDVPDVGGLDFD EVEKALEDYGRYRGLVPREGGGKEEKEEEKEEEEEEEGLFFDCVNGVETA LWESMHREEGEGGREGGRGGRTEGSSLRLRVDVVGGTLLAFASDDGVGGM VGGREGRQEEGQRARLQTTTTNTTAAAAADAAAADNNDDDGDDERDVCRT AAVPCLRVEWQELLAATGPVGLEKVTTAFSVGGLRVVEEGGKEGGRVWLG FEAMDEEDGRGRKGGRKGERSGGVFVASSLVPLDGTIDAFRLPPSSSSLP SSLPSSMSISVKISVRPFHTDVNVGKFKRWVGLYSGAMGGGEGGGKGGGG * back to topmRNA from alignment at chr14:252643..255763- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G00700.1 ID=NO14G00700.1|Name=NO14G00700.1|organism=Nannochloropsis oceanica|type=mRNA|length=3121bp|location=Sequence derived from alignment at chr14:252643..255763- (Nannochloropsis oceanica) GTGCTGTCATGTGGGAGAGTGGGAGAGAAGCAATAGAAGCATATGCCCGG
CGAGTCCTTTCTTTTTTTTCACTTTCATCACACCACCAACCGGGGCCCGG
GAGCGCAAGCACGTGCACTCTCTGCCCTGGACCCAGCACACCATCACGAA
TAACAGTCGGTTACCATGCGTATGCAGGCCATGTCGCGGCAATTGTTCAC
GTTGCTGCAAGAGAGACAGATCGTGAAGGCGTTGCAGCAGCGAAGAGCAA
ATGCCTTCACGCTTCTCTCACGCGTGTCCCCCTCCTTCTAAGCACAGGTA
GCCGCAGGGGCAAGAGGAGCAGTACCACGCACCACCCCTTTCTCTTTTCA
ATCGTACAACAGCCAGGACGGGGACCACGGGCCATGATCTAGACGAACAA
CAATCAGCATCAGTAGGATCAGTAGGATCAGTAGGATCAATAGCAGTGCA
GTGCTGGACCTCTCCTGAAAACTACAACCCCAACAAAAATGGTGCTCCAA
AGCATAGTCGACCGGCTGAAAGGAGCCCGCGAAGTAACGATCAAGCGGTT
GTATAAATTAGTCCTCCGCAAAGCCCTGGGCAATTTCCTAGCAGGTCAGC
TGGGGGTCGATCAGCTCGACGTAAAGCTCATCGTCCTTGAGGACACCCCT
TCCTCCCCCGGTACCTTCCCCTCATCCACCCGGCAAGGCTGTGTACAATT
AACTGATTTAGAGATAAATGTTGACCCGTTAAATGGTTTTTTGGCGTCTC
AACCATTGCAATTGCATAAAGGGAGGATTGGGAAGGTGGAAGTGACAGTG
TGTTATGAGAAGCTGTTGACAGAAGGGCTTAGGATTGTTCTGGAAGATGT
CGAGTTGGTATTGGTGCGACGCAAACCAGAAAAGGGTGATGAGAAGGGAA
GAAATATTGGGAGAGTGGCAGAGGTGAGGAGGAAGACGAAAAGGGAGGAG
GAGAAGGAGAAGATGGAAATGGTGGAGGCCAAGGCGAAAGAGGCGGCCAA
CAGGAGGAGGAGCAGTAGCAGCAGCAGGGGCAGTGAAGATGCTAGCATTA
TCGCAGAATGGATCGAACAGATCACGACGCAGCTTCGCGTGGAGGTGAAG
GGATTGAAGGTCCGCCTCGTGGAAGGTACGTCCCTTTCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCTTTCCTGAGCGGATCGGGGTAGAACTC
AATAGCTTTCATCCCTCCCTCCTTTCCCTCCCTTTTCACCTGAATTGTAC
GTGGATCGCATGGACTTCACCTCCACACTGTTAACCCTAACCCTAATTAA
CGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCACCCTCCCTCTTTCCAG
ATCCCGCCCAAACGTCCGCCCCGTCCTTGTCTTTGCTTGTCCGTCGTGCG
CACTACGAAGACGTCACGGCCAGATATCGAGGGGGAGGGGGCGGGAGGGA
AGGAGGAGGGGACGCGGATGGTCTCACTGGCCCCTCTCTCCCGCCCTCCT
CCTCCTGGGAGGTGTCGCATAAGCGAGTGCGGTTCGAAGGTGTGGAGGTG
TGGTTGGAACGAGGGAGGGAGGGGAGGGGGCCACCGTTTGCGGCACTGGG
AAGAGGAGGGGGAGGAGGAGGGAAAGGAAGAAGAAGAGGAGGGCGACACC
TAAATAATGGGAATGGACAGAGCGAGGAGGAGGAGGAGGAGGAGGAGGAC
GACGAAAATTCCATCAGTGCAACTGCCTCTTCCTTTCCTCCCCCCCGCCC
GTCCTTCTCCTCCTCCTCCTCCTCCCTCCGCCTGTTGGAAGTAACGGACG
AGGGTCAGTTGGACGTTAAGATCGGGCATTCCACTCGTCCGGCCCAAGCC
GCCAAGCTGGACTTCCGTCTGCAGGTACCTCCCGCCCTCCTTTCCCCCCT
CCTTCCCTCCCTCCCCCCTCCCCCCCTTCCTCCCGCCCGCCCTCTACTTT
CCTCCTTCTCTTCATCTCGCTTCACCCCTCCCTTTCTCCCTCCTTTCCTC
CCTCCCTCCCCCCTCTTCCCTTATATCAGATCAAGCACATCCTTCTTTCC
GTCTCCCCCTCCCTCCTTCAAGACCTCCTTTTTCTCTACTCCTCTTGCTC
TGCCTTCCCGGGAAAGGACACGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGCTCTTTGCTTGGCATGGCGACGAGAGGGACGTACCGGACGTG
GGAGGGTTAGACTTTGATGAGGTTGAGAAGGCCTTGGAAGACTATGGAAG
GTACAGGGGATTGGTGCCCAGGGAGGGAGGGGGGAAGGAGGAGAAGGAGG
AGGAGAAGGAGGAGGAGGAGGAGGAGGAAGGATTATTTTTCGATTGTGTG
AATGGGGTGGAAACCGCGCTGTGGGAGAGCATGCATAGGGAGGAGGGGGA
GGGAGGGAGGGAGGGAGGGAGGGGCGGAAGGACCGAGGGATCTTCATTGA
GGTTACGTGTTGATGTCGTTGGAGGGACGCTGCTGGCGTTCGCTTCCGAT
GATGGGGTGGGTGGGATGGTGGGAGGGAGGGAGGGAAGACAGGAGGAAGG
GCAACGAGCACGCCTCCAAACCACCACCACCAACACCACTGCTGCTGCTG
CTGCTGATGCTGCTGCTGCTGATAATAATGATGATGATGGTGATGATGAG
AGAGATGTTTGTCGTACTGCTGCTGTTCCTTGTCTGAGGGTGGAATGGCA
AGAGTTGCTGGCGGCTACTGGACCAGTGGGCCTGGAGAAGGTGACCACTG
CCTTCTCGGTGGGAGGGCTGCGGGTCGTCGAGGAGGGAGGGAAGGAGGGC
GGGCGGGTGTGGCTTGGGTTTGAGGCGATGGACGAGGAGGATGGGAGGGG
GAGGAAGGGGGGGAGGAAGGGGGAGAGGAGCGGGGGCGTCTTTGTTGCTT
CTTCACTGGTGCCGCTGGATGGGACCATTGATGCCTTTCGACTTCCTCCT
TCCTCCTCCTCCCTCCCTTCCTCCTTACCTTCCTCAATGTCGATTTCCGT
TAAAATTAGCGTTCGGCCGTTTCACACGGACGTCAATGTCGGGAAATTCA
AGCGTTGGGTGGGACTGTACAGTGGGGCGATGGGAGGGGGGGAGGGAGGG
GGGAAGGGAGGGGGGGGGTAA back to topCoding sequence (CDS) from alignment at chr14:252643..255763- >NO14G00700.1 ID=NO14G00700.1|Name=NO14G00700.1|organism=Nannochloropsis oceanica|type=CDS|length=2253bp|location=Sequence derived from alignment at chr14:252643..255763- (Nannochloropsis oceanica) ATGGTGCTCCAAAGCATAGTCGACCGGCTGAAAGGAGCCCGCGAAGTAAC GATCAAGCGGTTGTATAAATTAGTCCTCCGCAAAGCCCTGGGCAATTTCC TAGCAGGTCAGCTGGGGGTCGATCAGCTCGACGTAAAGCTCATCGTCCTT GAGGACACCCCTTCCTCCCCCGGTACCTTCCCCTCATCCACCCGGCAAGG CTGTGTACAATTAACTGATTTAGAGATAAATGTTGACCCGTTAAATGGTT TTTTGGCGTCTCAACCATTGCAATTGCATAAAGGGAGGATTGGGAAGGTG GAAGTGACAGTGTGTTATGAGAAGCTGTTGACAGAAGGGCTTAGGATTGT TCTGGAAGATGTCGAGTTGGTATTGGTGCGACGCAAACCAGAAAAGGGTG ATGAGAAGGGAAGAAATATTGGGAGAGTGGCAGAGGTGAGGAGGAAGACG AAAAGGGAGGAGGAGAAGGAGAAGATGGAAATGGTGGAGGCCAAGGCGAA AGAGGCGGCCAACAGGAGGAGGAGCAGTAGCAGCAGCAGGGGCAGTGAAG ATGCTAGCATTATCGCAGAATGGATCGAACAGATCACGACGCAGCTTCGC GTGGAGGTGAAGGGATTGAAGGTCCGCCTCGTGGAAGATCCCGCCCAAAC GTCCGCCCCGTCCTTGTCTTTGCTTGTCCGTCGTGCGCACTACGAAGACG TCACGGCCAGATATCGAGGGGGAGGGGGCGGGAGGGAAGGAGGAGGGGAC GCGGATGGTCTCACTGGCCCCTCTCTCCCGCCCTCCTCCTCCTGGGAGGT GTCGCATAAGCGAGTGCGGTTCGAAGGTGTGGAGGTGTGGTTGGAACGAG GGAGGGAGGGGAGGGGGCCACCGTTTGCGGCACTGGGAAGAGGAGGGGGA GGAGGAGGGAAAGGAAGAAGAAGAGGAGGGCGACACCTAAATAATGGGAA TGGACAGAGCGAGGAGGAGGAGGAGGAGGAGGAGGACGACGAAAATTCCA TCAGTGCAACTGCCTCTTCCTTTCCTCCCCCCCGCCCGTCCTTCTCCTCC TCCTCCTCCTCCCTCCGCCTGTTGGAAGTAACGGACGAGGGTCAGTTGGA CGTTAAGATCGGGCATTCCACTCGTCCGGCCCAAGCCGCCAAGCTGGACT TCCGTCTGCAGATCAAGCACATCCTTCTTTCCGTCTCCCCCTCCCTCCTT CAAGACCTCCTTTTTCTCTACTCCTCTTGCTCTGCCTTCCCGGGAAAGGA CACGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCTCTTTGCTT GGCATGGCGACGAGAGGGACGTACCGGACGTGGGAGGGTTAGACTTTGAT GAGGTTGAGAAGGCCTTGGAAGACTATGGAAGGTACAGGGGATTGGTGCC CAGGGAGGGAGGGGGGAAGGAGGAGAAGGAGGAGGAGAAGGAGGAGGAGG AGGAGGAGGAAGGATTATTTTTCGATTGTGTGAATGGGGTGGAAACCGCG CTGTGGGAGAGCATGCATAGGGAGGAGGGGGAGGGAGGGAGGGAGGGAGG GAGGGGCGGAAGGACCGAGGGATCTTCATTGAGGTTACGTGTTGATGTCG TTGGAGGGACGCTGCTGGCGTTCGCTTCCGATGATGGGGTGGGTGGGATG GTGGGAGGGAGGGAGGGAAGACAGGAGGAAGGGCAACGAGCACGCCTCCA AACCACCACCACCAACACCACTGCTGCTGCTGCTGCTGATGCTGCTGCTG CTGATAATAATGATGATGATGGTGATGATGAGAGAGATGTTTGTCGTACT GCTGCTGTTCCTTGTCTGAGGGTGGAATGGCAAGAGTTGCTGGCGGCTAC TGGACCAGTGGGCCTGGAGAAGGTGACCACTGCCTTCTCGGTGGGAGGGC TGCGGGTCGTCGAGGAGGGAGGGAAGGAGGGCGGGCGGGTGTGGCTTGGG TTTGAGGCGATGGACGAGGAGGATGGGAGGGGGAGGAAGGGGGGGAGGAA GGGGGAGAGGAGCGGGGGCGTCTTTGTTGCTTCTTCACTGGTGCCGCTGG ATGGGACCATTGATGCCTTTCGACTTCCTCCTTCCTCCTCCTCCCTCCCT TCCTCCTTACCTTCCTCAATGTCGATTTCCGTTAAAATTAGCGTTCGGCC GTTTCACACGGACGTCAATGTCGGGAAATTCAAGCGTTGGGTGGGACTGT ACAGTGGGGCGATGGGAGGGGGGGAGGGAGGGGGGAAGGGAGGGGGGGGG TAA back to top
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