NO12G03850.4, NO12G03850.4 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G03850.4
Unique Name	NO12G03850.4
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4335
Alignment location	chr12:1074152..1080118 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:1074152..1080118 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G03850.4 vs.
Match: XP_004367914.1 (transducin (beta) family 1X-linked, putative [Acanthamoeba castellanii str. Neff]; ELR25159.1 transducin (beta) family 1X-linked, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 347.4 bits (890), Expect = 5.600e-92
Identity = 174/406 (42.86%), Postives = 252/406 (62.07%), Query Frame = 0

Query:    1 MSFNTDEVNILIHRYLVESGYSHAAFTFYNEGALEKTNLRAADVPPGALIAYLQKGLEYVSIEEHINEDGSLKQCEEPFTLITPHICS---------NLKKAEGRLRKDKDSHGSASSSA-QDLLLIPPPPFPESHVAVMKEHTKEVFVLAWNPKYDLLATGSGDFTARLWRLP----GQSMIMADEDNRPIYDEPVVLRHASKATDKSKDVTCVEWS---RDGERVLTGCYDGVARVWGRDGTLVHSLADHDGAIFALKWNPSATCVASGSYDQSTVVWDMQTGETQQKWKNLHEAPILDLAWRNDTSFATGSADKTIKLLDLNQPAPEPSQTFRGHTDEVNTVAWDPTGTLLASCSDDTTAKIWQPDSPSCVQDLKDHKKEIYTIRWAPTGPGSENPGKKKLFA 390
            M+  ++EVN+L++RYL+ESG+SH+AFTF +E  + ++NL   DVP G+LI++LQ+GL+Y  +E HINE+G   QC+ PFTL   H+C+           K+ E  L + +D++      A  +   +     P+  V  ++ HT EVF+ +W+P   LLA+GSGD TAR+WR+P    G+SM++         + P+VLRH +K  + SKDVT ++W+    +G  + TG YDG+AR+W   G L ++L  H G IF+LKWN S   + SGS D++ ++WD +TGE +Q+++  H AP LD+ W++DT FAT S DK I                    DEVN + WDP+GTLLASCSDD TAKIW      CV D ++H+KEIYTI+W+PTG GS NP +  + A
Sbjct:    1 MAITSEEVNLLVYRYLLESGFSHSAFTFASESQVSRSNLATTDVPTGSLISFLQRGLQYKQLETHINEEGIEVQCDAPFTLTGHHVCNIRGTVKEKDTDKEKEEPLYEMRDANQEGGGPAPMEQEEVEAREIPDDQVTKLEGHTSEVFICSWSPTGPLLASGSGDSTARIWRIPPGPCGKSMVV---------EPPIVLRHFNKDQESSKDVTTLDWNVRGSEGALLATGSYDGLARIWSETGQLKNTLNRHKGPIFSLKWNKSGNYLLSGSVDKTAIIWDAKTGEVKQQFE-FHSAPTLDVDWKSDTCFATCSTDKMI-------------------YDEVNAIKWDPSGTLLASCSDDFTAKIWSLKQERCVHDFEEHQKEIYTIKWSPTGVGSPNPNRALVLA 377

The following BLAST results are available for this feature:

BLAST of NO12G03850.4 vs.

BLAST of NO12G03850.4 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_004367914.1	5.600e-92	42.86	transducin (beta) family 1X-linked, putative [Acan...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G03850	NO12G03850	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G03850.4	NO12G03850.4-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G03850.4.cds1	NO12G03850.4.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03850.4.cds2	NO12G03850.4.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03850.4.cds3	NO12G03850.4.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03850.4.cds4	NO12G03850.4.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03850.4.cds5	NO12G03850.4.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03850.4.cds6	NO12G03850.4.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03850.4.cds7	NO12G03850.4.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03850.4.cds8	NO12G03850.4.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03850.4.cds9	NO12G03850.4.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03850.4.cds10	NO12G03850.4.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03850.4.cds11	NO12G03850.4.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:1074152..1080118+
coding sequence from alignment at chr12:1074152..1080118+

mRNA sequence

>NO12G03850.4 ID=NO12G03850.4|Name=NO12G03850.4|organism=Nannochloropsis oceanica|type=mRNA|length=4335bp
TGCTTTCTCAAAACAGCCCCCGGTGCGGGCAAAGGCCGCTGCTGCCATAG
ACTTCCACCCGCAGTGCTGTCCGCCATGCGGTCATTCCCTCCCCCCAATC
CCTGTGACCACCCTCCTCCTCCCTTCCCCCCCGTCGGGTCCATTGGGTCG
ACCTCCTCCACCCCCTCCCTCCCCCTCTTCTTGTTCTTCCCTCCTCCACT
GCCACGCTGCTGCTCTTGCTGCTGCTGCTGCTGCTGTTTTTCTTGCCTGG
CAGCGTCTGCGTGTGCCTGCCTCGTTTGCTGGATGTCAGAAGAGAGGTCA
TCAGCAGCGGTGGGTTTGCTCCACCTCTTCATGTTGCTCGCCTCATGGAC
ATAGACCACTTGGCCCGTTGCCGCGTGTTTCACCTCCTTCCATCCCGGGG
GGAGGTTGCTTGTGATCGCGCTATGACCTCCTACCCCTCCTTCACCTGCC
CCTCCAACGACGGCACCCAAAGCAGCTATGGTGCTGGTGGTGGTAGTCGC
CGTACTGCCGCCCAAACCGTTGCTCCTCGCATCCTTGTTGATGCTCGTCA
CTGTTGCCACTGTTGCTGCTGCTGGTACTGCTCCAACAGGCTTGGTCCAG
GTGGTGGCATTGGTAGCAGGGTGCCAGTAATAGCTGTCTCCGGAACCTCC
CGGGTCTAGCACAGCCTCCCACCCCGGCGGCAATGGCGTTTCTTCCTCGA
TTTTCTTCTTTCCTCCTTGTCCTCCTTGTCCTCCTTCTACCTCTGAGTTG
GCTTTAGTCCCACCCGCCGCTTTTTCCCTCCTGAAGTCCTCTTGTTGCTT
CATCAATTTCGCCTTCAAAGCAGCCTCGCTCTGTGCCTCCTTCTCCTTCC
GCTTCTTGGTCAGCTCCCTCTCTCTAAGTACTTGGAGCGTGTTGTCCTTG
TGTATTGACAGACCTCCTCCCGCCGCAATGGCCAGCTCTTCGGCTTCCGC
TCCTGAGTAGGTGCCGCGATTAAGGACGCGCTCCGTGACCGAAACATTCA
TACAGCCTGGGGGGGGGTATGGTGAGGGAGGGAGAAGGAGGAGAGGCGAG
GTGAGAGAATCTGACAATGAGAGGTATTTATGGTGGGAGTAGGTGAACGA
CAAGAGGAGGAGAGGCGACAAAGGACAATATTTAAGGACCCGCTGCACAA
GGAGGACCAATGGGAGCATACCATTAACTGCCTCAGGCTGCTGAACACGG
GAAGATCAAAAAGAGGAGGACACTCACAAGTCTGGACGAAAGGTAATACG
CCTCACTAGAGAGCGGCCGAAAACAATACGTCAACCAAAACCATTTACTG
GAATAATACGATAACAACGAGGTTGACCTCCCCCCCTCTCCAACCCCCCA
CTAAAAGGAGACAGATAGATGCTCTAGGGCGTACCTTTATCTGTCACATA
CGCGCGCGCCGCTGCCCTCGCCTGCTGTGCTGCGAGCTCCTTGGCCAGGC
GGTCGCCTTGCATGAGTGGGTGCTGCTTGTTGGCCATGGTTTGTGTGTTA
TGGTGTTGCCCAGAGCACGTGAAGAAGGAAAGGAGGAGGGAGGAGCGATG
ATGCAGCCGATGCCTCGCCTTAAGTAGCGGCGCCTGGATACAGTAGTGAC
AACGATTGGGGCTCGAAGTTGGACCGGGATCAATGAAGACTTCTCACAGT
GTGTGAAGCAAGGGCTTTATGGCGCACAGAGCACAGCTTTGTGGTGGCAG
CCCCGAAACAAGGCGCGAACTCCTGCGAGGCTTCCTCCCCCTCCCTACCC
CCTCATTCCACAGATCACCTATTGTGGCTCACACGTCCGTCCGGTGCACC
CGCAGGCATACGCTTCAGTCCTTCCTTCGTCTTTGTCAACTCGTCGGGGC
GCGATTGTCCCTTATACAGTCAGTCAACGTGTGAAAATTTTCATCCAAGA
AGGTGTCGCATCAATCTATCCGCCTTCCGTGCGCCAACCCGACCTATTGC
ACCTCCCATCCAAACACAGGCAAGCGGGCGTGGGAGGGCGTACATTTCAA
GGAGACGTCCCCCGCAGCGGCGACTGGTGCAGCAGCTAGACGCCTGTTTG
CGCTGTGTGCCTTGTCCAGTACCTTTGCTCCTTCACATCACTCGTAGCCT
CCTGCTCCCTCTCCTCCCCTCCCTCCGTCTAAAGAATCGCCCGCGTCAGC
ATGTCGTTCAATACGGACGAAGTAAACATCCTTATTCATCGGTACTTGGT
CGAGAGCGGTTATAGCCATGCAGCCTTCACATTCTACAACGAAGGGGCTC
TGGAAAAAACGAATCTGCGCGCGGCCGACGTACCCCCCGGGGCCTTGATT
GCCTACCTCCAGAAGGGTTTGGAGTACGTGAGCATTGAGGAGCATATCAA
TGAGGACGGCAGCCTGAAGCAGTGTGAAGAGCCCTTTACGCTCATCACGC
CCCATATCTGCTCCAATCTGAAAAAGGCTGAGGGTCGCCTAAGAAAAGAC
AAGGACAGTCATGGCTCTGCCTCCTCCTCCGCGCAAGACCTGCTCCTCAT
CCCTCCCCCCCCCTTTCCCGAGAGCCACGTGGCGGTGATGAAGGAGCACA
CCAAGGAAGTCTTCGTCCTGGCCTGGAATCCAAAATACGATTTGCTGGCC
ACAGGCTCCGGCGACTTCACCGCCCGGCTTTGGAGGCTCCCGGGACAGTC
CATGATTATGGCGGACGAGGACAATCGACCCATATACGACGAGCCCGTGG
TGCTACGGCATGCCTCCAAGGCCACGGATAAGAGCAAGGACGTGACTTGC
GTTGAGTGGAGCAGGGACGGGGAGCGCGTCTTGACTGGATGCTACGATGG
GGTGGCGAGGGTGTGGGGAAGAGACGGGACGCTGGTGCATTCCCTTGCTG
ACCACGACGGGGCAATTTTCGCATTGAAGTGGAACCCCTCGGCGACGTGC
GTGGCCAGCGGAAGCTACGACCAGAGCACTGTGGTTTGGGATATGCAGAC
GGGCGAGACGCAACAAAAATGGAAAAACCTCCACGAAGCCCCGATCCTGG
ATCTGGCCTGGCGGAACGACACCTCCTTCGCCACCGGTAGTGCCGACAAG
ACCATCAAGCTCCTCGACCTCAACCAACCCGCGCCCGAACCCTCGCAGAC
ATTTCGGGGCCACACGGACGAGGTGAACACGGTGGCTTGGGATCCCACCG
GCACCCTCCTCGCCTCCTGCTCCGATGACACCACCGCCAAGATCTGGCAG
CCCGACTCCCCTTCCTGCGTCCAAGACCTGAAGGACCACAAGAAGGAAAT
TTACACCATTCGGTGGGCGCCCACGGGCCCCGGTAGCGAGAATCCGGGCA
AGAAGAAGCTGTTTGCGAGGTAGGAAAGGAAGGGAGGGAGGGAGGGAGGG
AAGGGGCTTCGAGGGCCTGCGTTGTGATCCCTCTGCTCACTTCCGCATTG
GACTGACAATCCCATATTCCTCTCCTCTCCTTTCTTCTTCCTTTCTTTCT
TGCTCTTTCCAGTGCCTCGTTCGACAACACCGTCAAGCTCTGGGACGTGG
AGGTGGGCAAGTGCGTCTCAACCCTGGCACGGCACCCCAAGGTAAAAGTG
ATCGTTCGACGAAATCTACGAATGGGAGGGAGGGAAGGAAGGAGGGACGG
GAGGGACGAAGCGAGGGGCTCACGGCTTTGTAGCACGCTAGTCTTGTCAC
TCACTTGTACTCCCTCCCTCCTTCCCTTCCTCTCTCCCTTCCGTCAGGCC
GTCTACGCGATGGCATTCGACAAGACGGGAGAGTATATCGCCTCAGGGGC
CTTGGGCGGTTCCTTATATGTCTGGAGCGTGAAGGACGGCAATATTGTGC
GCAGCTTCTGTAAGTTGAAAAAAGATGGGGGGGAAGGGCGTGAGAAAGCC
TTGTCGATCGTCCTCAGATTTTTCCTTCTTATTCTTTTATCCCTTTCCTT
TCTTCTATCATCCCCCTCCGCACTTTATTTCACTCAGCTGGCGGTGGCGA
TATTTTCGAAATTGCCTGGGATCGTCGCGGCGAACGGTTGGCCGCTTGTT
ACTCCTCAGGGAAAGTGGCCGTGCTCGACTTCCGCAAATAGCATTAAGAT
TGTGAGGGGAGGAATTGAATGGGCTTGCCGGCTTTTTGGGATGGCCGAGG
GCATTTGCAAATATGAATGACAATACTCAACAATGACGGAGAGGGAGTGA
GTGAGGGAGGCGAGGAGAAGAGAAAGGAAGAGAGGGGAAATGGAAGCATG
CTATAATTTTGAGGACGGCTAAGGTCAAAATGAAGGATGCATGAATATGG
CCACGACAAGTTTATAAACAAACCAATTAGCCAAGCCCAGAAATATTTGC
GAGGGCCACCAGAAAGAAGCAAACAAAGCGTTGTA

protein sequence of NO12G03850.4

>NO12G03850.4-protein ID=NO12G03850.4-protein|Name=NO12G03850.4|organism=Nannochloropsis oceanica|type=polypeptide|length=391bp
MSFNTDEVNILIHRYLVESGYSHAAFTFYNEGALEKTNLRAADVPPGALI
AYLQKGLEYVSIEEHINEDGSLKQCEEPFTLITPHICSNLKKAEGRLRKD
KDSHGSASSSAQDLLLIPPPPFPESHVAVMKEHTKEVFVLAWNPKYDLLA
TGSGDFTARLWRLPGQSMIMADEDNRPIYDEPVVLRHASKATDKSKDVTC
VEWSRDGERVLTGCYDGVARVWGRDGTLVHSLADHDGAIFALKWNPSATC
VASGSYDQSTVVWDMQTGETQQKWKNLHEAPILDLAWRNDTSFATGSADK
TIKLLDLNQPAPEPSQTFRGHTDEVNTVAWDPTGTLLASCSDDTTAKIWQ
PDSPSCVQDLKDHKKEIYTIRWAPTGPGSENPGKKKLFAR*

mRNA from alignment at chr12:1074152..1080118+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G03850.4 ID=NO12G03850.4|Name=NO12G03850.4|organism=Nannochloropsis oceanica|type=mRNA|length=5967bp|location=Sequence derived from alignment at chr12:1074152..1080118+ (Nannochloropsis oceanica)
TGCTTTCTCAAAACAGCCCCCGGTGCGGGCAAAGGCCGCTGCTGCCATAG
ACTTCCACCCGCAGTGCTGTCCGCCATGCGGTCATTCCCTCCCCCCAATC
CCTGTGACCACCCTCCTCCTCCCTTCCCCCCCGTCGGGTCCATTGGGTCG
ACCTCCTCCACCCCCTCCCTCCCCCTCTTCTTGTTCTTCCCTCCTCCACT
GCCACGCTGCTGCTCTTGCTGCTGCTGCTGCTGCTGTTTTTCTTGCCTGG
CAGCGTCTGCGTGTGCCTGCCTCGTTTGCTGGATGTCAGAAGAGAGGTCA
TCAGCAGCGGTGGGTTTGCTCCACCTCTTCATGTTGCTCGCCTCATGGAC
ATAGACCACTTGGCCCGTTGCCGCGTGTTTCACCTCCTTCCATCCCGGGG
GGAGGTTGCTTGTGATCGCGCTATGACCTCCTACCCCTCCTTCACCTGCC
CCTCCAACGACGGCACCCAAAGCAGCTATGGTGCTGGTGGTGGTAGTCGC
CGTACTGCCGCCCAAACCGTTGCTCCTCGCATCCTTGTTGATGCTCGTCA
CTGTTGCCACTGTTGCTGCTGCTGGTACTGCTCCAACAGGCTTGGTCCAG
GTGGTGGCATTGGTAGCAGGGTGCCAGTAATAGCTGTCTCCGGAACCTCC
CGGGTCTAGCACAGCCTCCCACCCCGGCGGCAATGGCGTTTCTTCCTCGA
TTTTCTTCTTTCCTCCTTGTCCTCCTTGTCCTCCTTCTACCTCTGAGTTG
GCTTTAGTCCCACCCGCCGCTTTTTCCCTCCTGAAGTCCTCTTGTTGCTT
CATCAATTTCGCCTTCAAAGCAGCCTCGCTCTGTGCCTCCTTCTCCTTCC
GCTTCTTGGTCAGCTCCCTCTCTCTAAGTACTTGGAGCGTGTTGTCCTTG
TGTATTGACAGACCTCCTCCCGCCGCAATGGCCAGCTCTTCGGCTTCCGC
TCCTGAGTAGGTGCCGCGATTAAGGACGCGCTCCGTGACCGAAACATTCA
TACAGCCTGGGGGGGGGTATGGTGAGGGAGGGAGAAGGAGGAGAGGCGAG
GTGAGAGAATCTGACAATGAGAGGTATTTATGGTGGGAGTAGGTGAACGA
CAAGAGGAGGAGAGGCGACAAAGGACAATATTTAAGGACCCGCTGCACAA
GGAGGACCAATGGGAGCATACCATTAACTGCCTCAGGCTGCTGAACACGG
GAAGATCAAAAAGAGGAGGACACTCACAAGTCTGGACGAAAGGTAATACG
CCTCACTAGAGAGCGGCCGAAAACAATACGTCAACCAAAACCATTTACTG
GAATAATACGATAACAACGAGGTTGACCTCCCCCCCTCTCCAACCCCCCA
CTAAAAGGAGACAGATAGATGCTCTAGGGCGTACCTTTATCTGTCACATA
CGCGCGCGCCGCTGCCCTCGCCTGCTGTGCTGCGAGCTCCTTGGCCAGGC
GGTCGCCTTGCATGAGTGGGTGCTGCTTGTTGGCCATGGTTTGTGTGTTA
TGGTGTTGCCCAGAGCACGTGAAGAAGGAAAGGAGGAGGGAGGAGCGATG
ATGCAGCCGATGCCTCGCCTTAAGTAGCGGCGCCTGGATACAGTAGTGAC
AACGATTGGGGCTCGAAGTTGGACCGGGATCAATGAAGACTTCTCACAGT
GTGTGAAGCAAGGGCTTTATGGCGCACAGAGCACAGCTTTGTGGTGGCAG
CCCCGAAACAAGGCGCGAACTCCTGCGAGGCTTCCTCCCCCTCCCTACCC
CCTCATTCCACAGATCACCTATTGTGGCTCACACGTCCGTCCGGTGCACC
CGCAGGCATACGCTTCAGTCCTTCCTTCGTCTTTGTCAACTCGTCGGGGC
GCGATTGTCCCTTATACAGTCAGTCAACGTGTGAAAATTTTCATCCAAGA
AGGTGTCGCATCAATCTATCCGCCTTCCGTGCGCCAACCCGACCTATTGC
ACCTCCCATCCAAACACAGGCAAGCGGGCGTGGGAGGGCGTACATTTCAA
GGAGACGTCCCCCGCAGCGGCGACTGGTGCAGCAGCTAGACGCCTGTTTG
CGCTGTGTGCCTTGTCCAGTACCTTTGCTCCTTCACATCACTCGTAGCCT
CCTGCTCCCTCTCCTCCCCTCCCTCCGTCTAAAGAATCGCCCGCGTCAGC
ATGTCGTTCAATACGGACGAAGTAAACATCCTTATTCATCGGTACTTGGT
CGAGAGCGGTTATAGCCATGCAGGTATACACAAAGAATGGAGGATGAGGA
GGAGGAGGAAGGAAATGAGGGAGGAGCAGCGCATGGACTTGGCTGTCACT
CATTCACACCCTCCCTCTCTCCTATACCAGCCTTCACATTCTACAACGAA
GGGGCTCTGGAAAAAACGAATCTGCGCGCGGCCGACGTACCCCCCGGGGC
CTTGATTGCCTACCTCCAGAAGGGTTTGGAGTACGTGAGCATTGAGGAGC
ATATCAATGAGGTAAGTCGGGAGAGCTGGGAGGGAGAACAAGAGGATGGG
AGAGTCTTCTTGTAAAGTTGATCGCGAGAGAGGGGGGGCATGTAACGTTC
ACGTACGCATTCGCTGGTAACGCGTCCTTTTCTGCCACTCCTGCTCTACT
TCCACACGCATACAGGACGGCAGCCTGAAGCAGTGTGAAGAGCCCTTTAC
GCTCATCACGCCCCATATCTGCTCCAATCTGAAAAAGGCTGAGGGTCGCC
TAAGAAAAGGTTAGGAGCATGGAGGGAGAGAGGAAAGGTGGGAAGTGTGG
GAGAGGTATTTTTGTAGTGTGTATACTTTGTCTGGTCGCGTCCCATTGCC
CTGAATTCAACCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CTTTCCCTGCCCTCCTCTCTCAGACAAGGACAGTCATGGCTCTGCCTCCT
CCTCCGCGCAAGACCTGCTCCTCATCCCTCCCCCCCCCTTTCCCGAGAGC
CACGTGGCGGTGATGAAGGAGCACACCAAGGAAGTCTTCGTCCTGGCCTG
GAATCCAAAATACGATTTGCTGGCCACAGGGTAAGGCAGGGAGGGAGAGG
GGGGGAAGGGACGGAGGGAGGGAGGGCGGGAAGGAGGGTGGGGATGCTTG
CCATAGGGGAAGGCAGGAAGGGAGGGAGGGCGGGAAGGAGGGTGGGAATG
CTATGAACTTGTCAGGCATTTTATTTCTTCGACTTTTACCTCACCTCCCT
CCCTCCCTCAGCTCCGGCGACTTCACCGCCCGGCTTTGGAGGCTCCCGGG
ACAGTCCATGATTATGGCGGACGAGGACAATCGACCCATATACGACGAGC
CCGTGGTGCTACGGCATGCCTCCAAGGTAGGTTATACGGCGCCTTTCTTC
CCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TTGTTTGGTGCACATGGTCACTTACTCAACTTTCGTTCCCTCACTCCCTC
CCTCCCTCCCTTCAGGCCACGGATAAGAGCAAGGACGTGACTTGCGTTGA
GTGGAGCAGGGACGGGGAGCGCGTCTTGACTGGATGCTACGATGGGGTGG
CGAGGTAGGGAGGGAGGGAGGAGGGGGAGGGAGGGAGAGGCGTTTATTTT
GTCTACTTTGCTGTAGCGCGATGACTCGGCCAGGGAGGGAGGAATGGGGA
GGAGGAATGAAGAGTAGCTCTTAAGACAGGCTCAGTCGAATCTTCTTTTC
AAATATTTAAATGTTTAAATATTCAAATCTTCAAACACAGGGTGTGGGGA
AGAGACGGGACGCTGGTGCATTCCCTTGCTGACCACGACGGGGCAATTTT
CGCATTGAAGTGGAACCCCTCGGTACGCCAGCTGGAAGGGAGGGACGGAG
GGACGGCGGGAGGGAGGGAGGGAGGGGGGAGGGAGGGCGGAAAGGCGAAG
TTGGTCGCCGTTCTCCAGGCTTGTGGTGCTTAAAAAGGAGAAGGGATGGA
GGGAGGGAGGGAGGGAGGGATGGAAGGCGGAATAGATGACTCAACTCACG
CATTTCCTCGAACAGGCGACGTGCGTGGCCAGCGGAAGCTACGACCAGAG
CACTGTGGTTTGGGATATGCAGACGGGCGAGGTAGGGAGGGAGGAAGGGA
GGGAGGGAGGAAGGGAGGGAAAGAGGGAGAAAGGCGAGTGGTACAAACGA
TGTATGTGATATCCACGATATCACCCTACCTCCCTCCCTCCTTCCTTCCC
TCCTTCCGTCCCTCCCTCCCTCCCCAAGACGCAACAAAAATGGAAAAACC
TCCACGAAGCCCCGATCCTGGATCTGGCCTGGCGGAACGACACCTCCTTC
GCCACCGGTAGTGCCGACAAGACCATCAAGCTCCTCGACCTCAACCAACC
CGCGCCCGAACCCTCGCAGACATTTCGGGTGAGTGTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCCCCTACCTTTTACCTT
TGAAGTGGGTCGCTAAGCTTCCTCCCTCCTCCCTCCTTCCCTCCCTCCTT
CCCCCCCTGCTGCAGGGCCACACGGACGAGGTGAACACGGTGGCTTGGGA
TCCCACCGGCACCCTCCTCGCCTCCTGCTCCGATGACACCACCGCCAAGG
TAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGCGGGTAAGGGGCCTTCGTA
CGTGGCTTTTCTCCTTTTCCCATATTGAGGTCGTTCTTGCCGATCTCCTT
CTTTCTCGCCTATCGTGATCTGGCGATCCGATTTTTCCATTCCCTTCCTT
GGACTTGTAGTAGCAGAAGAAGGACACCCGTTTCCCTTACTTCCTCCCAC
CCTACCCCCCTCCTTCTCCCCAGATCTGGCAGCCCGACTCCCCTTCCTGC
GTCCAAGACCTGAAGGACCACAAGAAGGAAATTTACACCATTCGGTGGGC
GCCCACGGGCCCCGGTAGCGAGAATCCGGGCAAGAAGAAGCTGTTTGCGA
GGTAGGAAAGGAAGGGAGGGAGGGAGGGAGGGAAGGGGCTTCGAGGGCCT
GCGTTGTGATCCCTCTGCTCACTTCCGCATTGGACTGACAATCCCATATT
CCTCTCCTCTCCTTTCTTCTTCCTTTCTTTCTTGCTCTTTCCAGTGCCTC
GTTCGACAACACCGTCAAGCTCTGGGACGTGGAGGTGGGCAAGTGCGTCT
CAACCCTGGCACGGCACCCCAAGGTAAAAGTGATCGTTCGACGAAATCTA
CGAATGGGAGGGAGGGAAGGAAGGAGGGACGGGAGGGACGAAGCGAGGGG
CTCACGGCTTTGTAGCACGCTAGTCTTGTCACTCACTTGTACTCCCTCCC
TCCTTCCCTTCCTCTCTCCCTTCCGTCAGGCCGTCTACGCGATGGCATTC
GACAAGACGGGAGAGTATATCGCCTCAGGGGCCTTGGGCGGTTCCTTATA
TGTCTGGAGCGTGAAGGACGGCAATATTGTGCGCAGCTTCTGTAAGTTGA
AAAAAGATGGGGGGGAAGGGCGTGAGAAAGCCTTGTCGATCGTCCTCAGA
TTTTTCCTTCTTATTCTTTTATCCCTTTCCTTTCTTCTATCATCCCCCTC
CGCACTTTATTTCACTCAGCTGGCGGTGGCGATATTTTCGAAATTGCCTG
GGATCGTCGCGGCGAACGGTTGGCCGCTTGTTACTCCTCAGGGAAAGTGG
CCGTGCTCGACTTCCGCAAATAGCATTAAGATTGTGAGGGGAGGAATTGA
ATGGGCTTGCCGGCTTTTTGGGATGGCCGAGGGCATTTGCAAATATGAAT
GACAATACTCAACAATGACGGAGAGGGAGTGAGTGAGGGAGGCGAGGAGA
AGAGAAAGGAAGAGAGGGGAAATGGAAGCATGCTATAATTTTGAGGACGG
CTAAGGTCAAAATGAAGGATGCATGAATATGGCCACGACAAGTTTATAAA
CAAACCAATTAGCCAAGCCCAGAAATATTTGCGAGGGCCACCAGAAAGAA
GCAAACAAAGCGTTGTA

Coding sequence (CDS) from alignment at chr12:1074152..1080118+

>NO12G03850.4 ID=NO12G03850.4|Name=NO12G03850.4|organism=Nannochloropsis oceanica|type=CDS|length=1173bp|location=Sequence derived from alignment at chr12:1074152..1080118+ (Nannochloropsis oceanica)
ATGTCGTTCAATACGGACGAAGTAAACATCCTTATTCATCGGTACTTGGT
CGAGAGCGGTTATAGCCATGCAGCCTTCACATTCTACAACGAAGGGGCTC
TGGAAAAAACGAATCTGCGCGCGGCCGACGTACCCCCCGGGGCCTTGATT
GCCTACCTCCAGAAGGGTTTGGAGTACGTGAGCATTGAGGAGCATATCAA
TGAGGACGGCAGCCTGAAGCAGTGTGAAGAGCCCTTTACGCTCATCACGC
CCCATATCTGCTCCAATCTGAAAAAGGCTGAGGGTCGCCTAAGAAAAGAC
AAGGACAGTCATGGCTCTGCCTCCTCCTCCGCGCAAGACCTGCTCCTCAT
CCCTCCCCCCCCCTTTCCCGAGAGCCACGTGGCGGTGATGAAGGAGCACA
CCAAGGAAGTCTTCGTCCTGGCCTGGAATCCAAAATACGATTTGCTGGCC
ACAGGCTCCGGCGACTTCACCGCCCGGCTTTGGAGGCTCCCGGGACAGTC
CATGATTATGGCGGACGAGGACAATCGACCCATATACGACGAGCCCGTGG
TGCTACGGCATGCCTCCAAGGCCACGGATAAGAGCAAGGACGTGACTTGC
GTTGAGTGGAGCAGGGACGGGGAGCGCGTCTTGACTGGATGCTACGATGG
GGTGGCGAGGGTGTGGGGAAGAGACGGGACGCTGGTGCATTCCCTTGCTG
ACCACGACGGGGCAATTTTCGCATTGAAGTGGAACCCCTCGGCGACGTGC
GTGGCCAGCGGAAGCTACGACCAGAGCACTGTGGTTTGGGATATGCAGAC
GGGCGAGACGCAACAAAAATGGAAAAACCTCCACGAAGCCCCGATCCTGG
ATCTGGCCTGGCGGAACGACACCTCCTTCGCCACCGGTAGTGCCGACAAG
ACCATCAAGCTCCTCGACCTCAACCAACCCGCGCCCGAACCCTCGCAGAC
ATTTCGGGGCCACACGGACGAGGTGAACACGGTGGCTTGGGATCCCACCG
GCACCCTCCTCGCCTCCTGCTCCGATGACACCACCGCCAAGATCTGGCAG
CCCGACTCCCCTTCCTGCGTCCAAGACCTGAAGGACCACAAGAAGGAAAT
TTACACCATTCGGTGGGCGCCCACGGGCCCCGGTAGCGAGAATCCGGGCA
AGAAGAAGCTGTTTGCGAGGTAG

Synonyms

Publications