NO12G00990.1, NO12G00990.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO12G00990.1
Unique NameNO12G00990.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1809
Alignment locationchr12:314594..316402 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:314594..316402 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G00990.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G00990NO12G00990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO12G00990.1NO12G00990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO12G00990.1.cds1NO12G00990.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO12G00990.1 ID=NO12G00990.1|Name=NO12G00990.1|organism=Nannochloropsis oceanica|type=mRNA|length=1809bp
ATGGCCGCTATGTTTGCCGCCTTCAAGAACAACGGGGGCAACGAGGAAGC
GGAGGAGGAGGTTCAACCCCTAAATCGCTTTCGCACCATGACTCGGCCGC
AGGTCAACCACACCACTAGCGACGACGAAGATGACGATAACGACCTCTAC
GAGCTGAGATTGGACATGCCGCCCATGCCGATCGTGGGCAAGCTCCCCGC
CATTCACGCGGAGCAGCAGCAGCAGCAGCAGCAGCCATTCCCCTCATCCT
CCCCCTTTTCGCCTTCCTTCTTCCTTGCCCCTGCTATCCCGCGTCCGCAG
CGCCGCAACGAGCCTATGAGCTCGGCAAAAATCAATGAGGCGGAAGAGGA
AGGCCAGGCCAGCAAGCGCGTCCGTGGCATGATAGTAGAACATGAGGGGG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGGGGAAGTGCCGGTGGAGATGGGAAAGACC
AGGATCAGGAAAGAGCTGCCATGATGGTAGCGGAAGGCGAAAGGGACGAG
GGTATGGAACAGGAGGAAGATACTCAGGAGGAAGACTCGCCGGAGGAGGA
AGGAATGGAGAAGGAGGGAGAGGAGGAAGAGAAGATGGAAGTGTCCAAGA
CCCGAATGGAGGAGGGGTCAGATCCGATCTCCGCTCCTTCGGCTTTGGCT
ACTTTGAGTAGGAAAGAGGGATGGAAGGAGGGATTGAAGGAGGGAGGAAA
GGTAGAAGTTGTGGCCCGGGTTGCACCTCAGCAGCAGTATCAGCAAATCG
AGAAGCGAAAAGAGGAGGAGAAAGAATGGGTTGGAGGAGAACAGACACAG
CACCAGCAGTACCAGTACCTTCTTCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGAAAGAGAAGCGAGGTCAGCAAGGACAACGAGGACCCGCCC
CTCCGACAAAGAAAACCGAGAAGCAGCAGCAGCAGAAGCAGCAGCAGCAG
CAGCAGCATGAGCAGAAGGTAGAACGAAATATGGAAGAAACGAGGGAGGA
CGGGAAAGAGGACAGGAAGGAGGGAGGGGGGGAGGACGAGTTCGACGGGG
TTTATCGTAGTGAAATTAAGAGGCTCAAGGGGTTGGAAGAGGCGGAGGAA
AAGGTGTCGATGCTGTGGGTGGGTGCGTTGAAAGAAACAATGGACGTGAC
GACGCGGCTGATGAGGAATGATTGTTACGTGCAGCATATTGCGAGGATTG
AGGAACTGAAGGAGTCTGTGAGGGAGGTGCTGGGGCTGTATGGCCTGGAG
GCGGAGGAGCAGGAGGTGGGGGAGGTATGACAGGGGTTGTGTTTGGGTGA
TGTATATATATATATATAGAGAGAGAGAGGGTGGGGGGAAATAGAGAGCG
AGAAAGAGAGGGGGAAACAGAGAAAAGAAAAAACAAAGAGAGAGAGAGAA
AGAAGAAGAAGAAAAGAAGGAGTAGAAGGCTTTGAAAAGATGAGCAAGGA
GAAGATAACGAAGCAGTAAGATGGCGATGATAACAATGGTGAAGATGAAG
AACAAATAGAGGCAAGAGAAGCTCAAGGAGAATGAGAAGAAGAACAAGAA
AAAGAACAATAACAGGAGACCGAAAGGGCCTCGAGCGAGCAGTAGACTGA
TAGGGAATGAAAAGAGAGAATGGAAGGGCAGGGCAGGCAACATCACGTCA
TGGGCTGTGACACGTACATGTGTATATGCTGGTGTTTATCAAAAGAAGGA
CGACGAGTG
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protein sequence of NO12G00990.1

>NO12G00990.1-protein ID=NO12G00990.1-protein|Name=NO12G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=460bp
MAAMFAAFKNNGGNEEAEEEVQPLNRFRTMTRPQVNHTTSDDEDDDNDLY
ELRLDMPPMPIVGKLPAIHAEQQQQQQQPFPSSSPFSPSFFLAPAIPRPQ
RRNEPMSSAKINEAEEEGQASKRVRGMIVEHEGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGSAGGDGKDQDQERAAMMVAEGERDE
GMEQEEDTQEEDSPEEEGMEKEGEEEEKMEVSKTRMEEGSDPISAPSALA
TLSRKEGWKEGLKEGGKVEVVARVAPQQQYQQIEKRKEEEKEWVGGEQTQ
HQQYQYLLQQQQQQQQQQQQKEKRGQQGQRGPAPPTKKTEKQQQQKQQQQ
QQHEQKVERNMEETREDGKEDRKEGGGEDEFDGVYRSEIKRLKGLEEAEE
KVSMLWVGALKETMDVTTRLMRNDCYVQHIARIEELKESVREVLGLYGLE
AEEQEVGEV*
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mRNA from alignment at chr12:314594..316402+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO12G00990.1 ID=NO12G00990.1|Name=NO12G00990.1|organism=Nannochloropsis oceanica|type=mRNA|length=1809bp|location=Sequence derived from alignment at chr12:314594..316402+ (Nannochloropsis oceanica)
ATGGCCGCTATGTTTGCCGCCTTCAAGAACAACGGGGGCAACGAGGAAGC
GGAGGAGGAGGTTCAACCCCTAAATCGCTTTCGCACCATGACTCGGCCGC
AGGTCAACCACACCACTAGCGACGACGAAGATGACGATAACGACCTCTAC
GAGCTGAGATTGGACATGCCGCCCATGCCGATCGTGGGCAAGCTCCCCGC
CATTCACGCGGAGCAGCAGCAGCAGCAGCAGCAGCCATTCCCCTCATCCT
CCCCCTTTTCGCCTTCCTTCTTCCTTGCCCCTGCTATCCCGCGTCCGCAG
CGCCGCAACGAGCCTATGAGCTCGGCAAAAATCAATGAGGCGGAAGAGGA
AGGCCAGGCCAGCAAGCGCGTCCGTGGCATGATAGTAGAACATGAGGGGG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGGGGAAGTGCCGGTGGAGATGGGAAAGACC
AGGATCAGGAAAGAGCTGCCATGATGGTAGCGGAAGGCGAAAGGGACGAG
GGTATGGAACAGGAGGAAGATACTCAGGAGGAAGACTCGCCGGAGGAGGA
AGGAATGGAGAAGGAGGGAGAGGAGGAAGAGAAGATGGAAGTGTCCAAGA
CCCGAATGGAGGAGGGGTCAGATCCGATCTCCGCTCCTTCGGCTTTGGCT
ACTTTGAGTAGGAAAGAGGGATGGAAGGAGGGATTGAAGGAGGGAGGAAA
GGTAGAAGTTGTGGCCCGGGTTGCACCTCAGCAGCAGTATCAGCAAATCG
AGAAGCGAAAAGAGGAGGAGAAAGAATGGGTTGGAGGAGAACAGACACAG
CACCAGCAGTACCAGTACCTTCTTCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGAAAGAGAAGCGAGGTCAGCAAGGACAACGAGGACCCGCCC
CTCCGACAAAGAAAACCGAGAAGCAGCAGCAGCAGAAGCAGCAGCAGCAG
CAGCAGCATGAGCAGAAGGTAGAACGAAATATGGAAGAAACGAGGGAGGA
CGGGAAAGAGGACAGGAAGGAGGGAGGGGGGGAGGACGAGTTCGACGGGG
TTTATCGTAGTGAAATTAAGAGGCTCAAGGGGTTGGAAGAGGCGGAGGAA
AAGGTGTCGATGCTGTGGGTGGGTGCGTTGAAAGAAACAATGGACGTGAC
GACGCGGCTGATGAGGAATGATTGTTACGTGCAGCATATTGCGAGGATTG
AGGAACTGAAGGAGTCTGTGAGGGAGGTGCTGGGGCTGTATGGCCTGGAG
GCGGAGGAGCAGGAGGTGGGGGAGGTATGACAGGGGTTGTGTTTGGGTGA
TGTATATATATATATATAGAGAGAGAGAGGGTGGGGGGAAATAGAGAGCG
AGAAAGAGAGGGGGAAACAGAGAAAAGAAAAAACAAAGAGAGAGAGAGAA
AGAAGAAGAAGAAAAGAAGGAGTAGAAGGCTTTGAAAAGATGAGCAAGGA
GAAGATAACGAAGCAGTAAGATGGCGATGATAACAATGGTGAAGATGAAG
AACAAATAGAGGCAAGAGAAGCTCAAGGAGAATGAGAAGAAGAACAAGAA
AAAGAACAATAACAGGAGACCGAAAGGGCCTCGAGCGAGCAGTAGACTGA
TAGGGAATGAAAAGAGAGAATGGAAGGGCAGGGCAGGCAACATCACGTCA
TGGGCTGTGACACGTACATGTGTATATGCTGGTGTTTATCAAAAGAAGGA
CGACGAGTG
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Coding sequence (CDS) from alignment at chr12:314594..316402+

>NO12G00990.1 ID=NO12G00990.1|Name=NO12G00990.1|organism=Nannochloropsis oceanica|type=CDS|length=1380bp|location=Sequence derived from alignment at chr12:314594..316402+ (Nannochloropsis oceanica)
ATGGCCGCTATGTTTGCCGCCTTCAAGAACAACGGGGGCAACGAGGAAGC
GGAGGAGGAGGTTCAACCCCTAAATCGCTTTCGCACCATGACTCGGCCGC
AGGTCAACCACACCACTAGCGACGACGAAGATGACGATAACGACCTCTAC
GAGCTGAGATTGGACATGCCGCCCATGCCGATCGTGGGCAAGCTCCCCGC
CATTCACGCGGAGCAGCAGCAGCAGCAGCAGCAGCCATTCCCCTCATCCT
CCCCCTTTTCGCCTTCCTTCTTCCTTGCCCCTGCTATCCCGCGTCCGCAG
CGCCGCAACGAGCCTATGAGCTCGGCAAAAATCAATGAGGCGGAAGAGGA
AGGCCAGGCCAGCAAGCGCGTCCGTGGCATGATAGTAGAACATGAGGGGG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGGGGAAGTGCCGGTGGAGATGGGAAAGACC
AGGATCAGGAAAGAGCTGCCATGATGGTAGCGGAAGGCGAAAGGGACGAG
GGTATGGAACAGGAGGAAGATACTCAGGAGGAAGACTCGCCGGAGGAGGA
AGGAATGGAGAAGGAGGGAGAGGAGGAAGAGAAGATGGAAGTGTCCAAGA
CCCGAATGGAGGAGGGGTCAGATCCGATCTCCGCTCCTTCGGCTTTGGCT
ACTTTGAGTAGGAAAGAGGGATGGAAGGAGGGATTGAAGGAGGGAGGAAA
GGTAGAAGTTGTGGCCCGGGTTGCACCTCAGCAGCAGTATCAGCAAATCG
AGAAGCGAAAAGAGGAGGAGAAAGAATGGGTTGGAGGAGAACAGACACAG
CACCAGCAGTACCAGTACCTTCTTCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGAAAGAGAAGCGAGGTCAGCAAGGACAACGAGGACCCGCCC
CTCCGACAAAGAAAACCGAGAAGCAGCAGCAGCAGAAGCAGCAGCAGCAG
CAGCAGCATGAGCAGAAGGTAGAACGAAATATGGAAGAAACGAGGGAGGA
CGGGAAAGAGGACAGGAAGGAGGGAGGGGGGGAGGACGAGTTCGACGGGG
TTTATCGTAGTGAAATTAAGAGGCTCAAGGGGTTGGAAGAGGCGGAGGAA
AAGGTGTCGATGCTGTGGGTGGGTGCGTTGAAAGAAACAATGGACGTGAC
GACGCGGCTGATGAGGAATGATTGTTACGTGCAGCATATTGCGAGGATTG
AGGAACTGAAGGAGTCTGTGAGGGAGGTGCTGGGGCTGTATGGCCTGGAG
GCGGAGGAGCAGGAGGTGGGGGAGGTATGA
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Synonyms
Publications