NO12G00860.1, NO12G00860.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G00860.1
Unique Name	NO12G00860.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3973
Alignment location	chr12:280966..286600 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:280966..286600 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G00860.1 vs.
Match: WP_101517752.1 (pyruvate, phosphate dikinase [Halioglobus lutimaris]; PLW69409.1 pyruvate, phosphate dikinase [Halioglobus lutimaris])

HSP 1 Score: 1011.9 bits (2615), Expect = 1.300e-291
Identity = 504/869 (58.00%), Postives = 649/869 (74.68%), Query Frame = 0

Query:   94 KRVYLFNEGKKEDKALLGGKGANLAEMSNIGLPVPPGFIISTATCLQYFAYEPDLPFGLVEEYMAAIKVIEEQTGKVFGSPQNPLLFSVRSGAAVSMPGMLDTVLSLGMNDEVAEALSAKSGNPRWVYDTYRRFIQMFSNVVLGVKMEKFDDILSQYKAGKAYAQDTDMTADDWKAIVKLYQGVTHVPSDPHEQLQLAIRAVFSSWMTPRAIKYRQYNDIPDTLGTGVTVQSMVFGNMGQDSGTGVAFTRNPSTGENVHFGEYLPNACGEDVVAGIRTPEDLVGLRAQSPRVYDELLKVFDLLETHYRDMQDIEFTVEKDKLYVLQCRSGKRTAKAAVTMAVEMVSEGLISEEEALLRIDAKQMDFFLHPTIDPSAAKTVVAKGLPASPGVGTGTLCFTSDEAEILAKQGMEVVLVRKETTAEDVHGMKSAKGVLTQHGGMTSHAAVVARGMGAPCVSGCHEIEVDAGRETLTLLRSGKVLKKGDTITIDGATGEVMEGKVALIRSTSDANFQTVLEWADECRTMKVKANADTPNDARKARELGAEGIGLSRTEHMFFDPKRIDVVREMILANDKTERQAALEKLFVFQKEDMREIFEVMSGYPVTFRLLDPPLHEFLPSDAGDIAALAKRIGKDVTVVASKIKALEEVNPMLGLRGCRLGLAFPEITEMQARAVISAALEAKANGFDPRPEIMIPLVSVATELEVASALVHATAEAVMKAKGMEGQLKYKVGTMLELPRACLNARQLAPMIEFASFGTNDLTQSTFGFSRDDIGGFLPRYLEEKILDKDPFETIDVDGVGQLMRMAVDGVRGAEGGAKKLFGLCGEQGGDPKSLLFCQELGLDSVSCSPFRVPIARLAAAQAAIQQRK 963
            KRVYLFNEG ++D+ LLGGKGANL EM+++GLPVP GFII+T TC +YF     LP  L +EY  A+ ++E+Q    FG P+NPLLFSVRSGA VSMPGM++T+L+LG+NDE+A  L+AK+ NPR+ YD YRRFI MF++VV+G+  EKF+  + QYKA     QD +M+A+DW+AI+ +Y+ +   P DP +QL++A+ AVF SW TPRAI YR+ N+IPDTLGT V+VQ+MVFGN G+DSG+GVAFTRNPSTGE   FGE+L NA GEDVVAGIRTP ++  LR + P VY+EL K   LLE HYRDMQD+EFTV++ + Y+LQ RSGKRT +AAV +AVEMV EG+I+E EAL+R+  + ++ FLHPT+DP+A K +VA GLPASPG  TG + F+++EAE +A +G  V+LVR+ETT ED+HGMK A G+LT+ GGMTSHAAVVARGMG   ++ C  + ++    T      G V+++GDTITIDG +GEVM G +    ++S  +FQT+L WAD+ R +KV+ANA+TP DA KARELGAEGIGL RTEHMFF+  RI+ +R MILA    ERQ  L+ L  FQ+ DM E+F+VM G PVT RLLDPPLHEFLP D  D+ ALAK +GK V  V +  + L EVNPMLG RGCRL + +PEITEMQ RA++SAA +A   GF P+PEIMIPLV    E+ + S ++    +AV++ + +   + YKVGTM+E PRA L A +LAP +EF SFGTNDLTQ T+GFSRDD G F+  Y+E+K++D DPF T+D   VG+LM MA+   R  + G K  +G+CGE GGDP+S+ FC  LGLD VSCSPFRVPIAR+AAAQA ++  K
Sbjct:    3 KRVYLFNEGNRDDRELLGGKGANLCEMTSLGLPVPFGFIITTDTCREYFQTGNKLPRLLEQEYRVALDMVEKQMDARFGDPENPLLFSVRSGAPVSMPGMMNTILNLGLNDEIAAGLAAKTNNPRFAYDCYRRFISMFADVVMGIPGEKFEHEIEQYKATHGKVQDVEMSAEDWQAIIAIYKTLVDFPEDPFQQLKMAVEAVFQSWHTPRAIIYREMNNIPDTLGTAVSVQAMVFGNFGEDSGSGVAFTRNPSTGEKQFFGEFLFNAAGEDVVAGIRTPLEVEALRERQPEVYEELYKTQALLEKHYRDMQDLEFTVQEGRFYMLQTRSGKRTGRAAVKIAVEMVGEGMITESEALMRVSPEHVEAFLHPTVDPTAKKDIVATGLPASPGGATGEIVFSAEEAEEVAAKGRSVILVRRETTPEDIHGMKVAAGILTELGGMTSHAAVVARGMGVCAITACGTLTINYAEGT-AQTDEGVVMRRGDTITIDGTSGEVMLGDIPKTEASSSDDFQTLLSWADKHRRLKVRANAETPEDAAKARELGAEGIGLCRTEHMFFEASRIEKMRAMILAESSEERQKYLDALLEFQRADMFELFKVMDGLPVTIRLLDPPLHEFLPHDEEDMRALAKSVGKPVETVRAIAEDLAEVNPMLGFRGCRLSIVYPEITEMQVRAIMSAAADAVEQGFKPKPEIMIPLVVNVREIRLISEIIDRGVQAVLRERLV--SVPYKVGTMMETPRATLGADRLAPEVEFMSFGTNDLTQMTYGFSRDDAGKFITSYIEKKLVDADPFVTLDQRAVGRLMEMAITESRRVKKGIK--YGICGEHGGDPRSIRFCHNLGLDYVSCSPFRVPIARIAAAQAHVEASK 866

The following BLAST results are available for this feature:

BLAST of NO12G00860.1 vs.

BLAST of NO12G00860.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
WP_101517752.1	1.300e-291	58.00	pyruvate, phosphate dikinase [Halioglobus lutimari...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G00860	NO12G00860	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00860.1	NO12G00860.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00860.1.cds1	NO12G00860.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00860.1.cds2	NO12G00860.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00860.1.cds3	NO12G00860.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00860.1.cds4	NO12G00860.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00860.1.cds5	NO12G00860.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00860.1.cds6	NO12G00860.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00860.1.cds7	NO12G00860.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00860.1.cds8	NO12G00860.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00860.1.cds9	NO12G00860.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00860.1.cds10	NO12G00860.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:280966..286600-
coding sequence from alignment at chr12:280966..286600-

mRNA sequence

>NO12G00860.1 ID=NO12G00860.1|Name=NO12G00860.1|organism=Nannochloropsis oceanica|type=mRNA|length=3973bp
AGAGGGGCCCATGCTAGTACAAACAAACCCCAAATACAATGCGTTTGTTT
GCGAGAAGGAGTGAACTAGATATACGTGGTGGCAGTTGATAGTAAAGCTT
GCTCACGTACTCCATTTTGGAAGCCTGATCCGCCTCATATTTTGGCCTCC
TCAGCCCTTCTATTTTCTCTTTCCATCCCGGATCGCCTCCATATGCTTCG
GCTTCGTTTTTCGAAGGGAAGAAGCAAGGACAGCATGCAAAGTTCGAATC
GGTTTTGACCCTCCTTCAATTATCACCCTCACAACTGTGTTCCCATCAAA
CACAGCACGCGTGCACCAAGCGAGGGCTCGTCTCGCCAGTAATCCACAGC
CAGCTTATCAAATTTCTTTCTTTCCCTTTCCCCCGCAGTGACGTCCGCAT
TGTTAGTGAGCCCTTGCCTCGCGCACTCGCAAGCAACCATGAAGACCGCC
GCCACCGCCGCCGCGCTCCTGTGTGCATTGGGCGTGGTACACGTGGAATC
CTTCCTTGGCCGTGCTCCAGCCTCGACCAAGCCCCCTAGATCCTTTCTCC
TTCCAATGGGAACTGCAACCACCACCACCACTTCAGCAACTGCTGCTGGC
TCCCGTCTCCTCATGTCTGCCACCGATATTCCCAGGCAGCAGGTACGCAC
GTCTTCCCCCTCTACCACCAAACCTGCAGGAGCAGCAGCAGCAGCCACGG
GAGGACCGACGGGCACCAAGCGCGTCTACCTCTTCAATGAAGGCAAGAAG
GAAGACAAGGCCTTGCTGGGTGGAAAAGGCGCGAATCTGGCAGAGATGAG
CAACATTGGCCTGCCTGTGCCCCCCGGCTTCATCATCAGCACCGCCACCT
GTCTCCAATACTTCGCCTATGAGCCTGACCTCCCGTTCGGCCTGGTGGAG
GAATACATGGCAGCCATCAAGGTTATCGAAGAGCAGACCGGGAAAGTGTT
TGGGAGCCCGCAGAACCCCCTCTTGTTCTCCGTGCGCTCGGGCGCCGCGG
TCAGCATGCCGGGGATGCTCGATACCGTCCTCTCCCTGGGCATGAACGAC
GAAGTGGCCGAGGCTCTTTCCGCCAAAAGCGGCAATCCCCGTTGGGTCTA
TGACACCTACCGCCGCTTTATTCAGATGTTCTCCAACGTGGTCCTGGGCG
TAAAGATGGAAAAATTCGATGATATTTTGAGCCAGTACAAGGCTGGTAAG
GCTTACGCGCAAGACACGGACATGACAGCTGACGACTGGAAGGCCATCGT
CAAGCTCTACCAGGGAGTGACGCACGTCCCGTCCGACCCACACGAGCAGC
TCCAGCTGGCGATTCGCGCCGTTTTTTCTTCCTGGATGACGCCCCGGGCC
ATCAAGTACAGGCAGTACAACGACATCCCGGACACCTTAGGCACGGGGGT
GACGGTGCAGAGTATGGTGTTTGGCAACATGGGCCAGGACTCAGGCACCG
GCGTGGCCTTCACCCGCAATCCGAGCACTGGCGAGAATGTTCATTTCGGG
GAGTATCTCCCCAACGCATGCGGAGAGGATGTGGTTGCCGGCATACGTAC
TCCGGAAGACCTCGTGGGCCTCCGCGCACAGAGCCCCCGTGTGTACGACG
AGTTATTAAAGGTCTTTGATCTGCTCGAAACGCACTACAGGGATATGCAG
GACATTGAGTTCACCGTCGAGAAAGACAAGCTCTACGTCCTTCAATGCCG
CTCTGGAAAACGCACAGCCAAGGCCGCCGTCACTATGGCCGTGGAAATGG
TGTCCGAGGGCCTCATCAGCGAGGAGGAAGCCCTCCTCCGCATCGACGCC
AAGCAGATGGACTTCTTTCTCCACCCGACCATCGACCCAAGTGCGGCCAA
GACGGTCGTTGCCAAAGGGCTCCCGGCCTCTCCAGGGGTAGGAACGGGGA
CTCTGTGTTTTACCTCGGACGAGGCGGAGATATTGGCGAAACAAGGAATG
GAAGTCGTCTTGGTGCGGAAGGAGACCACGGCCGAAGACGTGCATGGCAT
GAAGAGCGCCAAGGGTGTCCTAACGCAGCACGGGGGCATGACCTCCCACG
CCGCAGTCGTTGCCCGTGGTATGGGCGCCCCCTGCGTCAGCGGCTGCCAC
GAGATCGAGGTGGATGCCGGCCGCGAGACCCTCACCCTGCTCCGCTCCGG
CAAGGTGTTGAAAAAGGGGGACACCATCACCATCGACGGCGCTACGGGCG
AGGTCATGGAGGGTAAGGTGGCTCTTATTCGGTCGACGTCGGACGCAAAT
TTTCAGACGGTGTTGGAATGGGCGGATGAATGTCGGACGATGAAGGTGAA
AGCCAATGCTGATACTCCCAATGACGCGAGGAAAGCGAGGGAGTTAGGCG
CGGAAGGGATCGGGTTGTCCCGGACGGAGCATATGTTTTTCGATCCCAAG
CGGATTGACGTGGTCAGGGAGATGATCCTGGCAAACGATAAGACAGAGCG
TCAGGCGGCCTTGGAGAAATTGTTTGTGTTCCAGAAGGAAGATATGCGGG
AGATATTTGAGGTTATGTCCGGGTATCCTGTGACGTTTCGATTGCTCGAC
CCGCCTTTGCACGAGTTCCTGCCGTCCGACGCGGGGGACATTGCGGCCTT
GGCGAAGCGGATTGGGAAGGACGTCACGGTGGTGGCGAGTAAAATCAAAG
CCCTGGAAGAAGTAAATCCAATGCTGGGTCTGCGAGGGTGTCGGTTGGGG
TTGGCCTTCCCCGAAATAACGGAAATGCAGGCACGGGCAGTCATCTCCGC
GGCCTTGGAGGCAAAGGCGAACGGGTTTGACCCTCGCCCTGAGATCATGA
TTCCACTGGTGTCGGTGGCGACGGAATTGGAGGTGGCTTCGGCACTGGTC
CATGCAACGGCGGAGGCGGTGATGAAGGCAAAGGGGATGGAAGGGCAACT
AAAATACAAGGTAGGGACGATGCTGGAGTTGCCGCGGGCGTGTCTGAATG
CGAGGCAGCTGGCGCCTATGATCGAATTCGCCAGTTTTGGAACGAATGAC
TTGACCCAGTCCACCTTTGGCTTCTCGCGGGATGACATTGGCGGGTTCTT
GCCACGGTACCTGGAGGAGAAGATACTGGACAAGGATCCGTTCGAGACGA
TTGACGTGGACGGGGTTGGACAGCTGATGCGCATGGCCGTGGACGGCGTG
CGCGGGGCGGAAGGAGGGGCCAAGAAGCTGTTTGGTCTATGCGGCGAGCA
GGGGGGCGATCCCAAGAGCCTTCTGTTTTGCCAGGAGCTGGGCTTGGATT
CGGTGTCCTGTTCCCCTTTCCGTGTGCCTATCGCGCGTCTGGCAGCAGCG
CAGGCGGCGATTCAACAGCGGAAAGCACAGAAATAATAAAAGAGAAAGAG
AAGGGGGGGAAAGAGGAAAAGAAGAGGAACATAAGAGGAAAGAGATACTC
TGTGAGGGACGTCTGAGATGGGAAAACTGCAGGGACGGGTTGGTGCGCTG
AAGGAATTGGAGGAGAAGTGGGTAAGTTGGCGAAAGTGGTGTTTGTGGCA
TGGGAATATATCGGTGTAAGAAGCGATTTTGATCTTGCTGTCTAGGAAGT
AGATATGTGAAGGAATTTTTGAGGTGTTGTCTACCAGTTGTCATATGAGA
AGGTTGGATTTGAGACCGGAACGAAGACAACTACTTCACCCAAACAAAAA
TGTGGCAGCTTGTTGAATTTATTTTCAAGTGGGGTGATTTCAACGCCCGT
AATGGAAATGAAGGGGTGTAGTAAAATGACCGATGATATGGGCAGGCATC
GGATAAGAGATAAGAGGTGGAAGTAACGACGGGGAAAACAAAGAGAAAAA
GATACAAAGAGATGTTTGGGATGAAATGGCAATATCAGAAAAGAGACACG
AAAAATACAAAGATTGTGTGAGTAGATGATTATAGGAAATATAGAGAGCC
AATGCGGAAGTTTTCCCGCTCAAACAGACACGAATCAAAAAAGGAATAAG
GAGGGGATAAACTATATTGCTAA

protein sequence of NO12G00860.1

>NO12G00860.1-protein ID=NO12G00860.1-protein|Name=NO12G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=966bp
MKTAATAAALLCALGVVHVESFLGRAPASTKPPRSFLLPMGTATTTTTSA
TAAGSRLLMSATDIPRQQVRTSSPSTTKPAGAAAAATGGPTGTKRVYLFN
EGKKEDKALLGGKGANLAEMSNIGLPVPPGFIISTATCLQYFAYEPDLPF
GLVEEYMAAIKVIEEQTGKVFGSPQNPLLFSVRSGAAVSMPGMLDTVLSL
GMNDEVAEALSAKSGNPRWVYDTYRRFIQMFSNVVLGVKMEKFDDILSQY
KAGKAYAQDTDMTADDWKAIVKLYQGVTHVPSDPHEQLQLAIRAVFSSWM
TPRAIKYRQYNDIPDTLGTGVTVQSMVFGNMGQDSGTGVAFTRNPSTGEN
VHFGEYLPNACGEDVVAGIRTPEDLVGLRAQSPRVYDELLKVFDLLETHY
RDMQDIEFTVEKDKLYVLQCRSGKRTAKAAVTMAVEMVSEGLISEEEALL
RIDAKQMDFFLHPTIDPSAAKTVVAKGLPASPGVGTGTLCFTSDEAEILA
KQGMEVVLVRKETTAEDVHGMKSAKGVLTQHGGMTSHAAVVARGMGAPCV
SGCHEIEVDAGRETLTLLRSGKVLKKGDTITIDGATGEVMEGKVALIRST
SDANFQTVLEWADECRTMKVKANADTPNDARKARELGAEGIGLSRTEHMF
FDPKRIDVVREMILANDKTERQAALEKLFVFQKEDMREIFEVMSGYPVTF
RLLDPPLHEFLPSDAGDIAALAKRIGKDVTVVASKIKALEEVNPMLGLRG
CRLGLAFPEITEMQARAVISAALEAKANGFDPRPEIMIPLVSVATELEVA
SALVHATAEAVMKAKGMEGQLKYKVGTMLELPRACLNARQLAPMIEFASF
GTNDLTQSTFGFSRDDIGGFLPRYLEEKILDKDPFETIDVDGVGQLMRMA
VDGVRGAEGGAKKLFGLCGEQGGDPKSLLFCQELGLDSVSCSPFRVPIAR
LAAAQAAIQQRKAQK*

mRNA from alignment at chr12:280966..286600-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G00860.1 ID=NO12G00860.1|Name=NO12G00860.1|organism=Nannochloropsis oceanica|type=mRNA|length=5635bp|location=Sequence derived from alignment at chr12:280966..286600- (Nannochloropsis oceanica)
AGAGGGGCCCATGCTAGTACAAACAAACCCCAAATACAATGCGTTTGTTT
GCGAGAAGGAGTGAACTAGATATACGTGGTGGCAGTTGATAGTAAAGCTT
GCTCACGTACTCCATTTTGGAAGCCTGATCCGCCTCATATTTTGGCCTCC
TCAGCCCTTCTATTTTCTCTTTCCATCCCGGATCGCCTCCATATGCTTCG
GCTTCGTTTTTCGAAGGGAAGAAGCAAGGACAGCATGCAAAGTTCGAATC
GGTTTTGACCCTCCTTCAATTATCACCCTCACAACTGTGTTCCCATCAAA
CACAGCACGCGTGCACCAAGCGAGGGCTCGTCTCGCCAGTAATCCACAGC
CAGCTTATCAAATTTCTTTCTTTCCCTTTCCCCCGCAGTGACGTCCGCAT
TGTTAGTGAGCCCTTGCCTCGCGCACTCGCAAGCAACCATGAAGACCGCC
GCCACCGCCGCCGCGCTCCTGTGTGCATTGGGCGTGGTACACGTGGAATC
CTTCCTTGGCCGTGCTCCAGCCTCGACCAAGCCCCCTAGGTGAGTACTTG
CATCCATTGAGCCTCGCATATGGTGCGTGTATTTGTGAATATGTGCCACC
CGTCAAATCCGCACCGGCTGGTGCAACCCCCTAGCTTGCCCCTTTGTTCA
CAAGCAGTAACAGGGTCGCATGGTATTAGTGCTCCTCCACGTCACGCAGT
CCCCTAATCCAAACTTTCCTCCCTCCCTCCCCATGTCCCCTCCTCACTGA
CTCTCAAACCCGCACACATACACACTTAACCGCAGATCCTTTCTCCTTCC
AATGGGAACTGCAACCACCACCACCACTTCAGCAACTGCTGCTGGCTCCC
GTCTCCTCATGTCTGCCACCGATATTCCCAGGCAGCAGGTACGCACGTCT
TCCCCCTCTACCACCAAACCTGCAGGAGCAGCAGCAGCAGCCACGGGAGG
ACCGACGGGCACCAAGCGCGTCTACCTCTTCAATGAAGGCAAGAAGGAAG
ACAAGGCCTTGCTGGGTGGAAAAGGCGCGAATCTGGCAGAGATGAGCAAC
ATTGGCCTGCCTGTGGTATGTGCCGCGTGATGGGATCGGAGGGAGGGGAG
ATTGGAGAGGGGGGGTGGGATGGAAGAGATAGAGAGAGGTAGCTTGAGGA
GATGCGTACGCACAACTTAAGCAGGTGCCTTCATCATTCTCGATTTGTTC
GTTCATTCAGCCCATGTTTAAGTGACCCCCTCCCTCCCTCCCTCCTGGCC
CCAGCCCCCCGGCTTCATCATCAGCACCGCCACCTGTCTCCAATACTTCG
CCTATGAGCCTGACCTCCCGTTCGGCCTGGTGGAGGAATACATGGCAGCC
ATCAAGGTTATCGAAGAGCAGACCGGGAAAGTGTTTGGGAGCCCGCAGAA
CCCCCTCTTGTTCTCCGTGCGCTCGGGCGCCGCGGTCAGCATGCCGGGGA
TGCTCGATACCGGTAAGCATTTCCCCCCCTTCCTCCCTTCCTCCCTCTTC
CCCCTTCCTCCCTTCCTCCCTCCCTCCCACTGCTGACACACGTGCCGCAT
CCCTCAATGATCCTACGAGAGCCTCTCCCTCTTCCAAACAATCCTAACCT
GCCTCTCCTTCCCTCCCTCCTTTCCTCCCTCCCCCCTCACCCACCTCCAA
GTCCTCTCCCTGGGCATGAACGACGAAGTGGCCGAGGCTCTTTCCGCCAA
AAGCGGCAATCCCCGTTGGGTCTATGACACCTACCGCCGCTTTATTCAGG
TGCCCCTCCCGCCCTCTCTCCCGCCCTTTTGCCCTCCCGCACTCCCTTTC
GTCGTTGCCATCCCTCCTCCTCCCCCCCGGGGAATACTTTGAATCACTTT
TCCCCTCTCTCCTGGCCTCCCTCTCCATTCCACCCTCTTTCCCTGTCTCC
CTCCACCAGATGTTCTCCAACGTGGTCCTGGGCGTAAAGATGGAAAAATT
CGATGATATTTTGAGCCAGTACAAGGCTGGTAAGGCTTACGCGCAAGACA
CGGACATGACAGCTGACGACTGGAAGGCCATCGTCAAGCTCTACCAGGGA
GTGACGCACGTCCCGTCCGACCCACACGAGCAGCTCCAGCTGGCGATTCG
CGCCGTTTTTTCTTCCTGGATGACGCCCCGGGCCATCAAGTACAGGCAGT
ACAACGACATCCCGGACACCTTAGGCACGGGGGTGACGGTGCAGGTGGGA
ACGAGTGAGGGAGGGAGGGAGGGAGGGAAGGGGAAGAGGGAAGGACGGGA
AGGATGAAGGGACTACTTTGACCTTCAGATTCCCCCCCCCTATTGCGTGA
CGTTTCGTGTCCCACCCTCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCTCTCCCTCGCTGCCAGAGTATGGTGTTTGGCAACATGGGC
CAGGACTCAGGCACCGGCGTGGCCTTCACCCGCAATCCGAGCACTGGCGA
GAATGTTCATTTCGGGGTACGCGCCTTTTCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGGTGCCTT
CCCTTTCTTCCGCTCTTTGTCATCTTCAGGTCGATACTGCTCAGGCGGAG
GCCGCGCACGTGTTGGTAGAGGTCGCTGTCCAACCGTTTTCCCTCCCTCC
TTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
TCCTTCCTCCCTTTCCCCTTAAGGAGTATCTCCCCAACGCATGCGGAGAG
GATGTGGTTGCCGGCATACGTACTCCGGAAGACCTCGTGGGCCTCCGCGC
ACAGAGCCCCCGTGTGTACGACGAGTTATTAAAGGTCTTTGATCTGCTCG
AAACGCACTACAGGGATATGCAGGGTAAGCTTCCTTCCTTCCACCCATCC
TCCCTTAGTTTCTTTCTTCCTCGACTCACTTCTTCAATTGGACTGAGCCG
TCCCTCCCTCCCTCCCTCCCCCCCCACCCCCGTCGCCTCTCCTCCCTTAG
ACATTGAGTTCACCGTCGAGAAAGACAAGCTCTACGTCCTTCAATGCCGC
TCTGGAAAACGCACAGCCAAGGCCGCCGTCACTATGGGTAGGGAGGGAGG
GAGGGAGGGAGGAGCGATCAATAATTTCGAGTCCCTCACATGCACTCACA
TCCTCCCTTCCCCCCTCCCTCCCTCCGTCCCTCCCCCTTCCCAGCCGTGG
AAATGGTGTCCGAGGGCCTCATCAGCGAGGAGGAAGCCCTCCTCCGCATC
GACGCCAAGCAGATGGACTTCTTTCTCCACCCGACCATCGACCCAAGTGC
GGCCAAGACGGTCGTTGCCAAAGGGCTCCCGGCCTCTCCAGGGGTAGGAA
CGGGGACTCTGTGTTTTACCTCGGACGAGGCGGAGATATTGGCGAAACAA
GGAATGGAAGTCGTCTTGGTGCGGAAGGAGACCACGGCCGAAGACGTGCA
TGGCATGAAGGTGAGGAGGAGGGAGGGAGGGAGAAGGGGGAGGGAGGGAA
GGAGGGGGGGAAGGAAGGAGGGAGGGAATGAAGGAGAGAGGGAGGGAGGA
AGGGGAACATGACACCAAGAACCCGGGCGACTTGACTTCCTCTCTCTGTC
TCTCTGGCCCTTGCCTCTCACCTCCCCTCCCCCCATCCCTCCCTCCCTCT
CCTTCCGTTCCTCCAGAGCGCCAAGGGTGTCCTAACGCAGCACGGGGGCA
TGACCTCCCACGCCGCAGTCGTTGCCCGTGGTATGGGCGCCCCCTGCGTC
AGCGGCTGCCACGAGATCGAGGTGGATGCCGGCCGCGAGACCCTCACCCT
GCTCCGCTCCGGCAAGGTGTTGAAAAAGGGGGACACCATCACCATCGACG
GCGCTACGGGCGAGGTCATGGAGGGTAAGGTGGCTCTTATTCGGTCGACG
TCGGACGCAAATTTTCAGACGGTGTTGGAATGGGCGGATGAATGTCGGAC
GATGAAGGTGAAAGCCAATGCTGATACTCCCAATGACGCGAGGAAAGCGA
GGGAGTTAGGCGCGGAAGGGATCGGGTTGTCCCGGACGGAGCATATGTTT
TTCGATCCCAAGCGGATTGACGTGGTCAGGGAGATGATCCTGGCAAACGA
TAAGACAGAGCGTCAGGCGGCCTTGGAGAAATTGTTTGTGTTCCAGAAGG
AAGATATGCGGGAGATATTTGAGGTTATGTCCGGGTATCCTGTGACGTTT
CGATTGCTCGACCCGCCTTTGCACGAGTTCCTGCCGTCCGACGCGGGGGA
CATTGCGGCCTTGGCGAAGCGGATTGGGAAGGACGTCACGGTGGTGGCGA
GTAAAATCAAAGCCCTGGAAGAAGTAAATCCAATGCTGGGTCTGCGAGGG
TGTCGGTTGGGGTTGGCCTTCCCCGAAATAACGGAAATGCAGGCACGGGC
AGTCATCTCCGCGGCCTTGGAGGCAAAGGCGAACGGGTTTGACCCTCGCC
CTGAGATCATGATTCCACTGGTGTCGGTGGCGACGGAATTGGAGGTGGCT
TCGGCACTGGTCCATGCAACGGCGGAGGCGGTGATGAAGGCAAAGGGGAT
GGAAGGGCAACTAAAATACAAGGTAGGGACGATGCTGGAGTTGCCGCGGG
CGTGTCTGAATGCGAGGCAGCTGGCGCCTATGATCGAATTCGCCAGTTTT
GGAACGAATGACTTGACCCAGTCCACCTTTGGCTTCTCGCGGGATGACAT
TGGCGGGTTCTTGCCACGGTACCTGGAGGAGAAGATACTGGACAAGGATC
CGTTCGAGACGATTGACGTGGACGGGGTTGGACAGCTGATGCGCATGGCC
GTGGACGGCGTGCGCGGGGCGGAAGGAGGGGCCAAGAAGCTGTTTGGTCT
ATGCGGCGAGCAGGGGGGCGATCCCAAGAGCCTTCTGTTTTGCCAGGAGC
TGGGCTTGGATTCGGTGTCCTGTTCCCCTTTCCGTGTGCCTATCGCGCGT
CTGGCAGCAGCGCAGGCGGCGATTCAACAGCGGAAAGCACAGAAATAATA
AAAGAGAAAGAGAAGGGGGGGAAAGAGGAAAAGAAGAGGAACATAAGAGG
AAAGAGATACTCTGTGAGGGACGTCTGAGATGGGAAAACTGCAGGGACGG
GTTGGTGCGCTGAAGGAATTGGAGGAGAAGTGGGTAAGTTGGCGAAAGTG
GTGTTTGTGGCATGGGAATATATCGGTGTAAGAAGCGATTTTGATCTTGC
TGTCTAGGAAGTAGATATGTGAAGGAATTTTTGAGGTGTTGTCTACCAGT
TGTCATATGAGAAGGTTGGATTTGAGACCGGAACGAAGACAACTACTTCA
CCCAAACAAAAATGTGGCAGCTTGTTGAATTTATTTTCAAGTGGGGTGAT
TTCAACGCCCGTAATGGAAATGAAGGGGTGTAGTAAAATGACCGATGATA
TGGGCAGGCATCGGATAAGAGATAAGAGGTGGAAGTAACGACGGGGAAAA
CAAAGAGAAAAAGATACAAAGAGATGTTTGGGATGAAATGGCAATATCAG
AAAAGAGACACGAAAAATACAAAGATTGTGTGAGTAGATGATTATAGGAA
ATATAGAGAGCCAATGCGGAAGTTTTCCCGCTCAAACAGACACGAATCAA
AAAAGGAATAAGGAGGGGATAAACTATATTGCTAA

Coding sequence (CDS) from alignment at chr12:280966..286600-

>NO12G00860.1 ID=NO12G00860.1|Name=NO12G00860.1|organism=Nannochloropsis oceanica|type=CDS|length=2898bp|location=Sequence derived from alignment at chr12:280966..286600- (Nannochloropsis oceanica)
ATGAAGACCGCCGCCACCGCCGCCGCGCTCCTGTGTGCATTGGGCGTGGT
ACACGTGGAATCCTTCCTTGGCCGTGCTCCAGCCTCGACCAAGCCCCCTA
GATCCTTTCTCCTTCCAATGGGAACTGCAACCACCACCACCACTTCAGCA
ACTGCTGCTGGCTCCCGTCTCCTCATGTCTGCCACCGATATTCCCAGGCA
GCAGGTACGCACGTCTTCCCCCTCTACCACCAAACCTGCAGGAGCAGCAG
CAGCAGCCACGGGAGGACCGACGGGCACCAAGCGCGTCTACCTCTTCAAT
GAAGGCAAGAAGGAAGACAAGGCCTTGCTGGGTGGAAAAGGCGCGAATCT
GGCAGAGATGAGCAACATTGGCCTGCCTGTGCCCCCCGGCTTCATCATCA
GCACCGCCACCTGTCTCCAATACTTCGCCTATGAGCCTGACCTCCCGTTC
GGCCTGGTGGAGGAATACATGGCAGCCATCAAGGTTATCGAAGAGCAGAC
CGGGAAAGTGTTTGGGAGCCCGCAGAACCCCCTCTTGTTCTCCGTGCGCT
CGGGCGCCGCGGTCAGCATGCCGGGGATGCTCGATACCGTCCTCTCCCTG
GGCATGAACGACGAAGTGGCCGAGGCTCTTTCCGCCAAAAGCGGCAATCC
CCGTTGGGTCTATGACACCTACCGCCGCTTTATTCAGATGTTCTCCAACG
TGGTCCTGGGCGTAAAGATGGAAAAATTCGATGATATTTTGAGCCAGTAC
AAGGCTGGTAAGGCTTACGCGCAAGACACGGACATGACAGCTGACGACTG
GAAGGCCATCGTCAAGCTCTACCAGGGAGTGACGCACGTCCCGTCCGACC
CACACGAGCAGCTCCAGCTGGCGATTCGCGCCGTTTTTTCTTCCTGGATG
ACGCCCCGGGCCATCAAGTACAGGCAGTACAACGACATCCCGGACACCTT
AGGCACGGGGGTGACGGTGCAGAGTATGGTGTTTGGCAACATGGGCCAGG
ACTCAGGCACCGGCGTGGCCTTCACCCGCAATCCGAGCACTGGCGAGAAT
GTTCATTTCGGGGAGTATCTCCCCAACGCATGCGGAGAGGATGTGGTTGC
CGGCATACGTACTCCGGAAGACCTCGTGGGCCTCCGCGCACAGAGCCCCC
GTGTGTACGACGAGTTATTAAAGGTCTTTGATCTGCTCGAAACGCACTAC
AGGGATATGCAGGACATTGAGTTCACCGTCGAGAAAGACAAGCTCTACGT
CCTTCAATGCCGCTCTGGAAAACGCACAGCCAAGGCCGCCGTCACTATGG
CCGTGGAAATGGTGTCCGAGGGCCTCATCAGCGAGGAGGAAGCCCTCCTC
CGCATCGACGCCAAGCAGATGGACTTCTTTCTCCACCCGACCATCGACCC
AAGTGCGGCCAAGACGGTCGTTGCCAAAGGGCTCCCGGCCTCTCCAGGGG
TAGGAACGGGGACTCTGTGTTTTACCTCGGACGAGGCGGAGATATTGGCG
AAACAAGGAATGGAAGTCGTCTTGGTGCGGAAGGAGACCACGGCCGAAGA
CGTGCATGGCATGAAGAGCGCCAAGGGTGTCCTAACGCAGCACGGGGGCA
TGACCTCCCACGCCGCAGTCGTTGCCCGTGGTATGGGCGCCCCCTGCGTC
AGCGGCTGCCACGAGATCGAGGTGGATGCCGGCCGCGAGACCCTCACCCT
GCTCCGCTCCGGCAAGGTGTTGAAAAAGGGGGACACCATCACCATCGACG
GCGCTACGGGCGAGGTCATGGAGGGTAAGGTGGCTCTTATTCGGTCGACG
TCGGACGCAAATTTTCAGACGGTGTTGGAATGGGCGGATGAATGTCGGAC
GATGAAGGTGAAAGCCAATGCTGATACTCCCAATGACGCGAGGAAAGCGA
GGGAGTTAGGCGCGGAAGGGATCGGGTTGTCCCGGACGGAGCATATGTTT
TTCGATCCCAAGCGGATTGACGTGGTCAGGGAGATGATCCTGGCAAACGA
TAAGACAGAGCGTCAGGCGGCCTTGGAGAAATTGTTTGTGTTCCAGAAGG
AAGATATGCGGGAGATATTTGAGGTTATGTCCGGGTATCCTGTGACGTTT
CGATTGCTCGACCCGCCTTTGCACGAGTTCCTGCCGTCCGACGCGGGGGA
CATTGCGGCCTTGGCGAAGCGGATTGGGAAGGACGTCACGGTGGTGGCGA
GTAAAATCAAAGCCCTGGAAGAAGTAAATCCAATGCTGGGTCTGCGAGGG
TGTCGGTTGGGGTTGGCCTTCCCCGAAATAACGGAAATGCAGGCACGGGC
AGTCATCTCCGCGGCCTTGGAGGCAAAGGCGAACGGGTTTGACCCTCGCC
CTGAGATCATGATTCCACTGGTGTCGGTGGCGACGGAATTGGAGGTGGCT
TCGGCACTGGTCCATGCAACGGCGGAGGCGGTGATGAAGGCAAAGGGGAT
GGAAGGGCAACTAAAATACAAGGTAGGGACGATGCTGGAGTTGCCGCGGG
CGTGTCTGAATGCGAGGCAGCTGGCGCCTATGATCGAATTCGCCAGTTTT
GGAACGAATGACTTGACCCAGTCCACCTTTGGCTTCTCGCGGGATGACAT
TGGCGGGTTCTTGCCACGGTACCTGGAGGAGAAGATACTGGACAAGGATC
CGTTCGAGACGATTGACGTGGACGGGGTTGGACAGCTGATGCGCATGGCC
GTGGACGGCGTGCGCGGGGCGGAAGGAGGGGCCAAGAAGCTGTTTGGTCT
ATGCGGCGAGCAGGGGGGCGATCCCAAGAGCCTTCTGTTTTGCCAGGAGC
TGGGCTTGGATTCGGTGTCCTGTTCCCCTTTCCGTGTGCCTATCGCGCGT
CTGGCAGCAGCGCAGGCGGCGATTCAACAGCGGAAAGCACAGAAATAA

Synonyms

Publications