|
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr12 | genome | chr12:266172..269466 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO12G00800.1 vs.
Match: BAW99691.1 (lysophosphatidate acyltransferase 3 [Nannochloropsis sp. NIES-2145]) HSP 1 Score: 900.2 bits (2325), Expect = 3.300e-258 Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0
Query: 1 MWGLLWKHMTLRLLFVSVCLVTSSIGANMMALALFLVIRPFSRSLYRRLVSQCVACMWIDALSLLLPGTNIHIAADSDMPDGITAGIVVANHQYEGDWWFMLMVARFLGLHGNVKIIVREGLKKIPLLGWLVRLVEYPFISSSWSLSRTNLFGLLRSFNADDFPVLLFQFPEGDRIDAKVRQQSLAFAAKEQRPHLLHVLLPRTTGFNTCIEALRTSHPPVYDMTIAIPGTTGQPSSSSSSSSPSAAAAAASPSAGAAAAAAAASNTSTNPSSNPPSSSSTDTSPAAAAAAAADAAAAESHDASLFHTFLRFCNGEGPRDVHIRLKRYSLNDVLADPHWLDTKWAEKDRVLTYFSRHACFPAPLPPHMANGGGSTQTHGGRGGPRGPAGSHAVVGAAGNAQYLRSFNSRKFKAETSFLALARLLLTPLCLPLLLLMACPLMTLYVCVSTVRRWLGEEIVFSPGGREGGREG 472
MWGLLWKHMTLRLLFVSVCLVTSSIGANMMALALFLVIRPFSRSLYRRLVSQCVACMWIDALSLLLPGTNIHIAADSDMPDGITAGIVVANHQYEGDWWFMLMVARFLGLHGNVKIIVREGLKKIPLLGWLVRLVEYPFISSSWSLSRTNLFGLLRSFNADDFPVLLFQFPEGDRIDAKVRQQSLAFAAKEQRPHLLHVLLPRTTGFNTCIEALRTSHPPVYDMTIAIPGTTGQPSSSSSSSSPSAAAAAASPSAGAAAAAAAASNTSTNPSSNPPSSSSTDTSPAAAAAAAADAAAAESHDASLFHTFLRFCNGEGPRDVHIRLKRYSLNDVLADPHWLDTKWAEKDRVLTYFSRHACFPAPLPPHMANGGGSTQTHGGRGGPRGPAGSHAVVGAAGNAQYLRSFNSRKFKAETSFLALARLLLTPLCLPLLLLMACPLMTLYVCVSTVRRWLGEEIVFSPGGREGGREG
Sbjct: 1 MWGLLWKHMTLRLLFVSVCLVTSSIGANMMALALFLVIRPFSRSLYRRLVSQCVACMWIDALSLLLPGTNIHIAADSDMPDGITAGIVVANHQYEGDWWFMLMVARFLGLHGNVKIIVREGLKKIPLLGWLVRLVEYPFISSSWSLSRTNLFGLLRSFNADDFPVLLFQFPEGDRIDAKVRQQSLAFAAKEQRPHLLHVLLPRTTGFNTCIEALRTSHPPVYDMTIAIPGTTGQPSSSSSSSSPSAAAAAASPSAGAAAAAAAASNTSTNPSSNPPSSSSTDTSPAAAAAAAADAAAAESHDASLFHTFLRFCNGEGPRDVHIRLKRYSLNDVLADPHWLDTKWAEKDRVLTYFSRHACFPAPLPPHMANGGGSTQTHGGRGGPRGPAGSHAVVGAAGNAQYLRSFNSRKFKAETSFLALARLLLTPLCLPLLLLMACPLMTLYVCVSTVRRWLGEEIVFSPGGREGGREG 471
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO12G00800.1 ID=NO12G00800.1|Name=NO12G00800.1|organism=Nannochloropsis oceanica|type=mRNA|length=2737bp TGCCTGTGTCCGTGTGACAGAAGTGATACCAGCGCGTGTTACTTGAGTGA AGCGGGAGTTTTGTGGCCAAAAGAACGCGCGGTTGAATAGAAATGGGGGC GATGACCGGCTGCGGCCAAGCAAACCTCGAGATATGACGAATGTACACGC AATGGCAATATATGATGCATATGCCCCCTAGTGCAATGAGGCGTCGCTTC GATGACTACTACGACCACATTACCACACTAAACGGCACCTACCCAGTTTG CGCGTAGCGTACCATTTTGTGTCCGCTTTGTTCGCGTCGGCGCGCTCTAC ATATACTACGTTGCATGTGTTGCCCGCTCCATATAAGATGATGAGATGAA TAAGAAGAACAATACCTCGGCCTGCCGCCTGGGCACGGGCAAGCAGAACA AACGAAAAAGGCAGTGGCGTGCGCGATGCCTCAACCTCTGTGGCATTTTT GGGTGCATCCTTGAGTGGTACGCGTCGGCCGATGAAGACTCAAAGAAGCA GAGGCCACCGCCGTCGTCTTTGTACGGATTGTTGCTGCGGATGATGGTGG TCCGCCAGATGCTGCCAGGTGGAACGCTCATGCCCTCTCTCTCCGTTCCC TCCTCACCCGGCACATGCTGACAGAAGAGGCGCACACAACACAGGTTGTC GGGGCTGCACTCCTCGTCACTGCAACAGTTGCGTCGCTTTTTGGCCTCCT GCTGCTGTCGGCTTGCTTTCCCATCGTGTCCCATCTTACTACCTCGGTTG AATGCCACAGCCCACCGGAGCAGATCTCACAGTACTCAGTACACAAACAA AGGACACGCAACAGCGCACCACATCGTGCAGCGACACGGTTCCTATACGC AGGCAGGCCTCCATCTGCGAGTTCTGCCACCTTCAAATCGAATTGCAACT AGTGTAAGGTTTAAGCAGCCTTCCTTCCACCATCTCCTCCACCTCCTCCT TCTCCTCACCACCACGCTCATCCACCGTCCTCGCTTCAATCAATCTTGGG GAGGAAAGGAGCTACAGCAAGATGTGGGGCTTATTATGGAAACACATGAC CCTACGACTCCTCTTCGTCTCAGTCTGCTTGGTCACCTCCTCCATCGGCG CCAACATGATGGCCCTCGCCCTCTTCCTCGTCATCCGACCCTTTTCCCGC TCGCTGTATCGACGGTTGGTGTCACAGTGTGTGGCATGCATGTGGATCGA TGCACTGTCCTTGCTCCTACCGGGAACCAACATCCACATTGCTGCTGACT CTGACATGCCCGACGGGATCACTGCCGGCATCGTGGTGGCCAATCACCAA TACGAAGGTGATTGGTGGTTCATGCTCATGGTCGCCCGCTTCCTGGGCCT GCATGGGAACGTGAAGATAATAGTCAGGGAGGGCCTTAAGAAGATCCCCC TCTTGGGGTGGCTGGTCCGGCTTGTCGAGTACCCATTCATCTCCTCCTCC TGGTCGCTCTCCCGCACGAACCTCTTTGGGCTGCTGCGGAGTTTCAATGC GGACGACTTCCCCGTCCTCCTCTTCCAGTTCCCCGAGGGCGATCGCATCG ATGCCAAAGTCCGTCAGCAATCGCTTGCCTTTGCGGCCAAGGAGCAACGC CCGCACCTCCTCCACGTCCTCCTCCCCCGTACTACCGGTTTCAACACCTG CATCGAAGCGCTTAGGACTTCCCATCCCCCCGTCTATGATATGACAATTG CCATCCCTGGCACCACGGGCCAGCCTTCCTCCTCCTCCTCCTCCTCCTCA CCTTCTGCTGCAGCTGCTGCGGCGTCTCCATCTGCTGGTGCGGCGGCGGC GGCGGCGGCGGCGAGCAACACATCAACCAACCCTTCTTCCAACCCTCCCT CGAGCAGCAGCACCGATACTAGTCCAGCTGCTGCTGCTGCTGCTGCTGCT GATGCCGCTGCTGCCGAGAGTCATGACGCTTCTCTCTTTCACACCTTCCT CCGTTTCTGCAACGGCGAGGGCCCACGGGACGTGCATATCAGACTCAAGC GCTACTCCCTCAACGACGTCCTGGCCGACCCCCACTGGCTCGACACCAAA TGGGCCGAGAAAGACCGCGTCTTGACCTACTTTTCCCGCCACGCCTGCTT TCCTGCTCCGCTCCCTCCCCACATGGCCAATGGTGGGGGCAGCACTCAGA CACACGGGGGGAGGGGGGGCCCCAGAGGGCCGGCGGGCTCTCATGCCGTG GTGGGAGCAGCGGGTAACGCCCAGTATCTCCGGTCGTTCAATTCCCGGAA ATTCAAAGCAGAAACGAGTTTTTTGGCGTTGGCACGACTGTTACTCACGC CGTTGTGCCTTCCCTTGTTGTTGCTGATGGCCTGTCCGCTCATGACTCTG TATGTATGCGTGAGCACCGTCCGAAGGTGGTTGGGGGAGGAGATTGTGTT CTCGCCAGGAGGACGGGAGGGAGGGAGGGAGGGCGGTATACCACGGGTCA GCTCGAGGGGAGGGGACGGGGGGAGGAAGGAGGGGTTGAATGGGGGAGAG GAGAGTGTGACGCCGTTGCCGATTCCGACGCCGTTTTTGCCGCAGACGCC GTTTACGAGTCCGTTAATTGGAGCGTTTGAACTGGGGGCTGGGAGGGAGG GAGGGAGGGAGGGAGGGGGAGGGGGTAATGGTGGAGCAGGAGGAGGCAGA GGAGGAGGTGGGAAAGGAGGAGGGGCAGGGAAGGGGGGGGAGGGAGGGGG GGGAGAGTGGTGTACAGAAGAGAGTGCACAGTTTTGA back to topprotein sequence of NO12G00800.1 >NO12G00800.1-protein ID=NO12G00800.1-protein|Name=NO12G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=572bp MWGLLWKHMTLRLLFVSVCLVTSSIGANMMALALFLVIRPFSRSLYRRLV SQCVACMWIDALSLLLPGTNIHIAADSDMPDGITAGIVVANHQYEGDWWF MLMVARFLGLHGNVKIIVREGLKKIPLLGWLVRLVEYPFISSSWSLSRTN LFGLLRSFNADDFPVLLFQFPEGDRIDAKVRQQSLAFAAKEQRPHLLHVL LPRTTGFNTCIEALRTSHPPVYDMTIAIPGTTGQPSSSSSSSSPSAAAAA ASPSAGAAAAAAAASNTSTNPSSNPPSSSSTDTSPAAAAAAAADAAAAES HDASLFHTFLRFCNGEGPRDVHIRLKRYSLNDVLADPHWLDTKWAEKDRV LTYFSRHACFPAPLPPHMANGGGSTQTHGGRGGPRGPAGSHAVVGAAGNA QYLRSFNSRKFKAETSFLALARLLLTPLCLPLLLLMACPLMTLYVCVSTV RRWLGEEIVFSPGGREGGREGGIPRVSSRGGDGGRKEGLNGGEESVTPLP IPTPFLPQTPFTSPLIGAFELGAGREGGREGGGGGNGGAGGGRGGGGKGG GAGKGGEGGGGEWCTEESAQF* back to topmRNA from alignment at chr12:266172..269466+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO12G00800.1 ID=NO12G00800.1|Name=NO12G00800.1|organism=Nannochloropsis oceanica|type=mRNA|length=3295bp|location=Sequence derived from alignment at chr12:266172..269466+ (Nannochloropsis oceanica) TGCCTGTGTCCGTGTGACAGAAGTGATACCAGCGCGTGTTACTTGAGTGA
AGCGGGAGTTTTGTGGCCAAAAGAACGCGCGGTTGAATAGAAATGGGGGC
GATGACCGGCTGCGGCCAAGCAAACCTCGAGATATGACGAATGTACACGC
AATGGCAATATATGATGCATATGCCCCCTAGTGCAATGAGGCGTCGCTTC
GATGACTACTACGACCACATTACCACACTAAACGGCACCTACCCAGTTTG
CGCGTAGCGTACCATTTTGTGTCCGCTTTGTTCGCGTCGGCGCGCTCTAC
ATATACTACGTTGCATGTGTTGCCCGCTCCATATAAGATGATGAGATGAA
TAAGAAGAACAATACCTCGGCCTGCCGCCTGGGCACGGGCAAGCAGAACA
AACGAAAAAGGCAGTGGCGTGCGCGATGCCTCAACCTCTGTGGCATTTTT
GGGTGCATCCTTGAGTGGTACGCGTCGGCCGATGAAGACTCAAAGAAGCA
GAGGCCACCGCCGTCGTCTTTGTACGGATTGTTGCTGCGGATGATGGTGG
TCCGCCAGATGCTGCCAGGTGGAACGCTCATGCCCTCTCTCTCCGTTCCC
TCCTCACCCGGCACATGCTGACAGAAGAGGCGCACACAACACAGGTTGTC
GGGGCTGCACTCCTCGTCACTGCAACAGTTGCGTCGCTTTTTGGCCTCCT
GCTGCTGTCGGCTTGCTTTCCCATCGTGTCCCATCTTACTACCTCGGTTG
AATGCCACAGCCCACCGGAGCAGATCTCACAGTACTCAGTACACAAACAA
AGGACACGCAACAGCGCACCACATCGTGCAGCGACACGGTTCCTATACGC
AGGCAGGCCTCCATCTGCGAGTTCTGCCACCTTCAAATCGAATTGCAACT
AGTGTAAGGTTTAAGCAGCCTTCCTTCCACCATCTCCTCCACCTCCTCCT
TCTCCTCACCACCACGCTCATCCACCGTCCTCGCTTCAATCAATCTTGGG
GAGGAAAGGAGCTACAGCAAGATGTGGGGCTTATTATGGAAACACATGAC
CCTACGACTCCTCTTCGTCTCAGTCTGCTTGGTCACCTCCTCCATCGGCG
CCAACATGATGGCCCTCGCCCTCTTCCTCGTCATCCGACCCTTTTCCCGC
TCGCTGTATCGACGGTTGGTGTCACAGTGTGTGGCATGCATGTGGATCGA
TGCACTGTCCTTGCTCCTACCGGGAACCAACATCCACATTGCTGCTGACT
CTGGTACGTCCCTCCCCTCCCTCTCTCCCTTCCTTCCTCCTTATCGACCC
TCCGTTTTTTCGTTCTCCTCCCTCATCAAATTGAAGAGCAGATACGACCA
ATAACAATCCATACAAACCCTAGGACCTTCTACCTCTTTTGTCATTTCTT
GCGCCCCCTATCGCCTCTGCGCTCTTCCTTCCCTTGAAGACGCTTACCCC
CTCCCTCCCTCCCTCCCTTCCCCCCTCCATCCATTCCTCGCTAGACATGC
CCGACGGGATCACTGCCGGCATCGTGGTGGCCAATCACCAATACGAAGGT
GATTGGTGGTTCATGCTCATGGTCGCCCGCTTCCTGGGCCTGCATGGGAA
CGTGAAGATAATAGTCAGGGAGGGCCTTAAGAAGATCCCCCTCTTGGGGT
GGCTGGTCCGGCTTGTCGAGTACCCATTCATCTCCTCCTCCTGGTCGCTC
TCCCGCACGAACCTCTTTGGGCTGCTGCGGAGTTTCAATGCGGGTAGGAT
GCAAGGGAGGGAGGCAAGAAGGAAAGGAAGGAAGGAGGGAGGGAGAGATT
TGTCATAATAAAGCTCGGTGTGGAATGGGCTTCACTCACCAGCCGGAACC
CTCACCGCCCTCCCTCTTTCCCTCCCTCCCACCTTTCATCTCCTTTTCCA
GACGACTTCCCCGTCCTCCTCTTCCAGTTCCCCGAGGGCGATCGCATCGA
TGCCAAAGTCCGTCAGCAATCGCTTGCCTTTGCGGCCAAGGAGCAACGCC
CGCACCTCCTCCACGTCCTCCTCCCCCGTACTACCGGTTTCAACACCTGC
ATCGAAGCGCTTAGGACTTCCCATCCCCCCGTCTATGATATGACAATTGC
CATCCCTGGCACCACGGGCCAGCCTTCCTCCTCCTCCTCCTCCTCCTCAC
CTTCTGCTGCAGCTGCTGCGGCGTCTCCATCTGCTGGTGCGGCGGCGGCG
GCGGCGGCGGCGAGCAACACATCAACCAACCCTTCTTCCAACCCTCCCTC
GAGCAGCAGCACCGATACTAGTCCAGCTGCTGCTGCTGCTGCTGCTGCTG
ATGCCGCTGCTGCCGAGAGTCATGACGCTTCTCTCTTTCACACCTTCCTC
CGTTTCTGCAACGGCGAGGGCCCACGGGACGTGCATATCAGGTAGAGTCA
TGCTTTTCCCTTCATCCTGTCCCTCTTCTTTTCCTATCAGCACGCCTCTA
TCCCCTCTCCCCCCTCCCCTCCGCAAAACAGTCACGAAAAACTAATGCAG
CCTCCTTCCTCTCTCCCACCCTTCCACCCTCCCTCCTTCCTCCCTCCAAG
ACTCAAGCGCTACTCCCTCAACGACGTCCTGGCCGACCCCCACTGGCTCG
ACACCAAATGGGCCGAGAAAGACCGCGTCTTGACCTACTTTTCCCGCCAC
GCCTGCTTTCCTGCTCCGCTCCCTCCCCACATGGCCAATGGTGGGGGCAG
CACTCAGACACACGGGGGGAGGGGGGGCCCCAGAGGGCCGGCGGGCTCTC
ATGCCGTGGTGGGAGCAGCGGGTAACGCCCAGTATCTCCGGTCGTTCAAT
TCCCGGAAATTCAAAGCAGAAACGAGTTTTTTGGCGTTGGCACGACTGTT
ACTCACGCCGTTGTGCCTTCCCTTGTTGTTGCTGATGGCCTGTCCGCTCA
TGACTCTGTATGTATGCGTGAGCACCGTCCGAAGGTGGTTGGGGGAGGAG
ATTGTGTTCTCGCCAGGAGGACGGGAGGGAGGGAGGGAGGGCGGTATACC
ACGGGTCAGCTCGAGGGGAGGGGACGGGGGGAGGAAGGAGGGGTTGAATG
GGGGAGAGGAGAGTGTGACGCCGTTGCCGATTCCGACGCCGTTTTTGCCG
CAGACGCCGTTTACGAGTCCGTTAATTGGAGCGTTTGAACTGGGGGCTGG
GAGGGAGGGAGGGAGGGAGGGAGGGGGAGGGGGTAATGGTGGAGCAGGAG
GAGGCAGAGGAGGAGGTGGGAAAGGAGGAGGGGCAGGGAAGGGGGGGGAG
GGAGGGGGGGGAGAGTGGTGTACAGAAGAGAGTGCACAGTTTTGA back to topCoding sequence (CDS) from alignment at chr12:266172..269466+ >NO12G00800.1 ID=NO12G00800.1|Name=NO12G00800.1|organism=Nannochloropsis oceanica|type=CDS|length=1716bp|location=Sequence derived from alignment at chr12:266172..269466+ (Nannochloropsis oceanica) ATGTGGGGCTTATTATGGAAACACATGACCCTACGACTCCTCTTCGTCTC AGTCTGCTTGGTCACCTCCTCCATCGGCGCCAACATGATGGCCCTCGCCC TCTTCCTCGTCATCCGACCCTTTTCCCGCTCGCTGTATCGACGGTTGGTG TCACAGTGTGTGGCATGCATGTGGATCGATGCACTGTCCTTGCTCCTACC GGGAACCAACATCCACATTGCTGCTGACTCTGACATGCCCGACGGGATCA CTGCCGGCATCGTGGTGGCCAATCACCAATACGAAGGTGATTGGTGGTTC ATGCTCATGGTCGCCCGCTTCCTGGGCCTGCATGGGAACGTGAAGATAAT AGTCAGGGAGGGCCTTAAGAAGATCCCCCTCTTGGGGTGGCTGGTCCGGC TTGTCGAGTACCCATTCATCTCCTCCTCCTGGTCGCTCTCCCGCACGAAC CTCTTTGGGCTGCTGCGGAGTTTCAATGCGGACGACTTCCCCGTCCTCCT CTTCCAGTTCCCCGAGGGCGATCGCATCGATGCCAAAGTCCGTCAGCAAT CGCTTGCCTTTGCGGCCAAGGAGCAACGCCCGCACCTCCTCCACGTCCTC CTCCCCCGTACTACCGGTTTCAACACCTGCATCGAAGCGCTTAGGACTTC CCATCCCCCCGTCTATGATATGACAATTGCCATCCCTGGCACCACGGGCC AGCCTTCCTCCTCCTCCTCCTCCTCCTCACCTTCTGCTGCAGCTGCTGCG GCGTCTCCATCTGCTGGTGCGGCGGCGGCGGCGGCGGCGGCGAGCAACAC ATCAACCAACCCTTCTTCCAACCCTCCCTCGAGCAGCAGCACCGATACTA GTCCAGCTGCTGCTGCTGCTGCTGCTGCTGATGCCGCTGCTGCCGAGAGT CATGACGCTTCTCTCTTTCACACCTTCCTCCGTTTCTGCAACGGCGAGGG CCCACGGGACGTGCATATCAGACTCAAGCGCTACTCCCTCAACGACGTCC TGGCCGACCCCCACTGGCTCGACACCAAATGGGCCGAGAAAGACCGCGTC TTGACCTACTTTTCCCGCCACGCCTGCTTTCCTGCTCCGCTCCCTCCCCA CATGGCCAATGGTGGGGGCAGCACTCAGACACACGGGGGGAGGGGGGGCC CCAGAGGGCCGGCGGGCTCTCATGCCGTGGTGGGAGCAGCGGGTAACGCC CAGTATCTCCGGTCGTTCAATTCCCGGAAATTCAAAGCAGAAACGAGTTT TTTGGCGTTGGCACGACTGTTACTCACGCCGTTGTGCCTTCCCTTGTTGT TGCTGATGGCCTGTCCGCTCATGACTCTGTATGTATGCGTGAGCACCGTC CGAAGGTGGTTGGGGGAGGAGATTGTGTTCTCGCCAGGAGGACGGGAGGG AGGGAGGGAGGGCGGTATACCACGGGTCAGCTCGAGGGGAGGGGACGGGG GGAGGAAGGAGGGGTTGAATGGGGGAGAGGAGAGTGTGACGCCGTTGCCG ATTCCGACGCCGTTTTTGCCGCAGACGCCGTTTACGAGTCCGTTAATTGG AGCGTTTGAACTGGGGGCTGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAG GGGGTAATGGTGGAGCAGGAGGAGGCAGAGGAGGAGGTGGGAAAGGAGGA GGGGCAGGGAAGGGGGGGGAGGGAGGGGGGGGAGAGTGGTGTACAGAAGA GAGTGCACAGTTTTGA back to top
|