NO12G00270.1, NO12G00270.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G00270.1
Unique Name	NO12G00270.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3034
Alignment location	chr12:86396..92680 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:86396..92680 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G00270.1 vs.
Match: EWM25994.1 (water dikinase [Nannochloropsis gaditana])

HSP 1 Score: 649.0 bits (1673), Expect = 2.100e-182
Identity = 373/630 (59.21%), Postives = 443/630 (70.32%), Query Frame = 0

Query:  284 TGLALDEKGFVAVDDHLQSISHPSVFAGGDICSMVRHPRPKAGVFAVRAGPPLLENIKRALRGERLVRYTPQSTFLSLISTGDTHAVASKGHYLALEGAWLWALKDWIDRKFMRMYQDLPPMPPPGGLFPPPSSSFFSTSLFASLSSSFSSSAAARHSSPDDNPASSSSSSSLYSHPMRCGGCGSKVGASILSRVLAKLDLPLSHREDILMGVGDDAAVLLPPAPPILQVQTLDFFRAFSPRFDPFIFGQIAANHALSDCHAMNAQPRTALALVVVPLAATENITEALLVQLLAGAAQVLNAAGCALVGGHTSEGSELSLGFSITGEASPSHLLYKSKTKRERVDGIGPLCVRAGHPTGWEGRKEEGGGEKAGERNAIDAGQETGARAPSSPSSPSLPPSICPSYVLLLTKALGTGTLLAAEGQGKGKARWEEGAVASMLQSNANAAKILWEVGQATAATDVTGFGLVGHLGEMIKGGMG-EGE-----SEGGNEQGGVRVRLSLPSLAALQGAEACFAKDITSSLAPANEHHAQSLLYFPSDDRPPVGAAASATTTTTAKIKSHPKYPLLFDPQTAGGLLATVVPERVEATMVALRAAGYGAACVIGEVWRVEKGGDGEREGKIELVLD 908
            TGL LDEKGF+AV+ HLQS+S P VFA GD+ SM+ +PRPKAGVFAVRAGPPLL N++ ALRG  L  YTPQSTFLSLISTGD +A+ASKG    LEGAWLW +KD IDRKFMRMYQDLP M P      PP S        ++LSS F+ S     S P  +P  +++S  ++SH MRCGGCGSKVGASILSRVL++++   S  EDIL+G+GDDAAV  PP PP+LQ+QTLDFFR F PRFDP++FGQIAANHALSDCHAMNA+PRTALA  VVPLAA+E +TE LL+QLLAGA QVLNAAGC LVGGHTSEG+EL+LGF+ITGEA PS LLYK    R            + H      + +E   E    R      + +  R+ S  SSPS   +  P++ LLLTKALGTGT++AA GQG+G A+WE GAVASMLQSNA AA ILW  G A AATDVTGFG++GHL EMI+G  G  GE     + G  ++GGVR RL L SL AL GAE C AK ITSSLAPAN+HHA+ LL             ++   + T+ ++ H KYPLLFDPQTAGGLLA V  ++V  T+ AL+AAGY AACVIGEVW  EK      +  IELV+D
Sbjct:    3 TGLTLDEKGFLAVNRHLQSVSDPYVFAAGDVSSMLENPRPKAGVFAVRAGPPLLRNLQNALRGATLATYTPQSTFLSLISTGDKYAIASKGSVFVLEGAWLWKMKDHIDRKFMRMYQDLPSMDPSTSSSSPPFS-------LSALSSFFTPSHPPNPSDPGSSPGEAATS--VHSHTMRCGGCGSKVGASILSRVLSRIEQSHSCNEDILLGMGDDAAVFRPPPPPLLQIQTLDFFRIFFPRFDPYVFGQIAANHALSDCHAMNARPRTALAQAVVPLAASEKLTEGLLLQLLAGAVQVLNAAGCTLVGGHTSEGTELTLGFAITGEAHPSQLLYKKGILRN-----------SSHL-----KNDEEESEDVKRRRLDGMTRMSPGRSLSRASSPSTSFAPVPTFSLLLTKALGTGTIMAAAGQGQGSAKWEAGAVASMLQSNAKAADILWREGGAIAATDVTGFGVLGHLTEMIRGDNGMVGEDNLLTTAGTGQEGGVRARLILSSLPALPGAEDCLAKGITSSLAPANQHHARHLL----------RNVSTVAHSNTSSLRQHSKYPLLFDPQTAGGLLACVPVDKVGITLHALQAAGYEAACVIGEVWNDEK-----TDVHIELVID 592

The following BLAST results are available for this feature:

BLAST of NO12G00270.1 vs.

BLAST of NO12G00270.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25994.1	2.100e-182	59.21	water dikinase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G00270	NO12G00270	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00270.1	NO12G00270.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00270.1.cds1	NO12G00270.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds2	NO12G00270.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds3	NO12G00270.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds4	NO12G00270.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds5	NO12G00270.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds6	NO12G00270.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds7	NO12G00270.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds8	NO12G00270.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds9	NO12G00270.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds10	NO12G00270.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds11	NO12G00270.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds12	NO12G00270.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds13	NO12G00270.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds14	NO12G00270.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds15	NO12G00270.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds16	NO12G00270.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00270.1.cds17	NO12G00270.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:86396..92680-
coding sequence from alignment at chr12:86396..92680-

mRNA sequence

>NO12G00270.1 ID=NO12G00270.1|Name=NO12G00270.1|organism=Nannochloropsis oceanica|type=mRNA|length=3034bp
ACAGAGTGCTACGCAGGCTGAGGCAGAAGGGCAAGAGGGCCAGGAGTAGC
GTCAAGGGGAGCTAGAGGTGGATTCAAAGGACACGGCGACGCAGCAGGGA
CAGCAACAGGAGCGGTAGAATTCTTTGTTAGGCATTGCATCTCTTCCCAA
CGCCAGCCGTTTGAGTGAATTGCAAAAAATAGCGGCATAGTTAACCAGCA
GCCATGAAGCTCAGCCTGGACCCTACCCCGTACATGAAGGACCTCATCCT
CATTGGTGGTGGACATGCCCATGTCCATGTGCTTAAGATGTGGGGCATGC
AGCCGGTGCCAGGGGTGCAACTGACCCTCATCACCCGCGATCTCAACACT
CCTTACTCGGGAATGCTTCCAGGACACATCGCGGGGCACTACACGAGAGA
GGACTGCCACATCGACCTGACCCGCCTGGCGCACTTTGCCGGGGCCCGCT
TGGTCCACACGGAGGCGTGTGGCTTAGACCCCGTCCAGCGCACGGTCAGC
TGCAAAGACGGTCGTCCCCCTCTCCCTTATGATGTGCTCTCCCTCGATAT
TGGTTCCTCGCCCAGCGCGGGTGTGGTGGGGGGACACGAGGTGGGAATCA
CACCCGTGAAGCCTATCGATGGGTTGAGCGGGCGGTGGGACGACCTGCTG
GAAAGAGCGCGGGCGTGGCCGGTGGGAGGTCCGCCGCTGCGGTTGTTGGT
GGTGGGGGGAGGGGCGGCGGGTGTGGAGCTGGCCCTGGCCATGCAATATC
GACTCGGGAGGGTGATGGAGGGGGGGGCAAAGAGGGTGGAGGTCTCCCTC
CTCACCAAAGGCGAGTCGGTGCTCAGCAGCCACCCTCTGAAAGTCCGGTG
TATTTTCCTACGTATTTTCAAAGAGAGGGGCATTATGCTCCACACTCAGG
CAGAGGCCGCACGCGTGGAGAAAGTAGAAGCCCCAGACCCTTCCCCCTCC
TCCTCCCTGGCCGGCGTCCTTTATACTGAGGACGGGCGTTCGTTTCCTTA
CCACGAGTGCGTATGGTGCACGGAGGGACAGCCAGCGCCGTGGCTCCAGG
ACACGGGACTGGCCCTGGACGAGAAGGGATTTGTGGCTGTTGACGACCAC
CTGCAGTCTATCTCCCATCCCTCCGTCTTTGCAGGCGGGGACATCTGCTC
CATGGTGCGGCATCCACGACCCAAAGCAGGTGTGTTTGCTGTGCGTGCGG
GGCCTCCATTACTGGAAAATATTAAGCGGGCGCTGCGGGGAGAGAGGCTC
GTGAGGTACACACCTCAGTCCACCTTTCTGTCCCTCATCTCCACGGGAGA
CACGCACGCTGTGGCCTCCAAAGGCCATTATCTAGCCCTGGAGGGCGCCT
GGTTGTGGGCCCTTAAAGATTGGATCGACCGCAAGTTTATGAGGATGTAT
CAGGACCTTCCTCCCATGCCTCCTCCCGGAGGGCTTTTCCCTCCTCCTTC
CTCCTCCTTTTTTTCCACCTCCCTCTTTGCCTCCTTGTCGTCGTCGTTCT
CCTCCTCGGCTGCTGCCCGCCACTCTTCACCAGACGATAATCCTGCCTCC
TCCTCCTCCTCCTCCTCCCTATATTCACATCCCATGCGCTGCGGGGGCTG
CGGATCGAAGGTGGGCGCATCCATTCTTTCCCGCGTGTTGGCCAAGCTAG
ATCTCCCCCTCTCCCACCGAGAAGACATTCTCATGGGTGTGGGCGACGAT
GCGGCTGTCCTGCTACCTCCAGCCCCCCCCATCCTCCAAGTGCAGACCCT
GGACTTTTTTCGCGCCTTTTCCCCGCGCTTTGATCCCTTCATATTTGGGC
AGATCGCTGCGAACCACGCTCTCTCCGACTGCCACGCAATGAACGCGCAA
CCTCGGACGGCCCTCGCCCTGGTGGTCGTCCCTCTTGCCGCCACCGAAAA
CATAACCGAGGCCCTGCTAGTGCAGCTCTTGGCCGGTGCAGCGCAGGTCT
TGAACGCCGCGGGATGCGCCCTGGTCGGGGGGCACACATCGGAGGGATCC
GAGCTGTCCCTGGGCTTTTCCATAACGGGCGAGGCTTCTCCCTCCCACCT
CTTGTACAAGAGCAAGACCAAGAGGGAGCGGGTTGATGGCATTGGTCCTC
TCTGCGTCCGCGCGGGCCATCCAACGGGATGGGAGGGACGGAAGGAGGAG
GGAGGAGGAGAGAAAGCAGGAGAACGAAATGCTATTGATGCTGGACAAGA
AACAGGGGCAAGGGCACCATCATCACCCTCCTCTCCCTCCCTCCCTCCCT
CCATCTGTCCCTCCTATGTCCTTCTCCTGACCAAGGCCCTGGGAACCGGA
ACGCTCCTGGCGGCAGAGGGGCAGGGAAAGGGGAAGGCAAGGTGGGAAGA
AGGGGCGGTAGCTTCCATGCTCCAGTCGAACGCGAATGCAGCAAAGATTT
TGTGGGAGGTTGGACAAGCGACAGCTGCCACGGACGTGACTGGCTTCGGC
CTAGTGGGGCACTTGGGCGAGATGATAAAGGGAGGAATGGGGGAGGGGGA
AAGCGAGGGAGGAAATGAGCAGGGCGGCGTGCGTGTCCGCCTCTCCCTTC
CTTCTCTTGCGGCCTTGCAGGGCGCGGAAGCCTGCTTTGCCAAGGATATT
ACTTCCTCTCTCGCGCCAGCAAATGAACATCATGCCCAGTCCCTCCTCTA
TTTCCCTTCCGATGATCGCCCCCCCGTAGGAGCAGCAGCATCAGCCACAA
CAACAACAACAGCAAAGATCAAAAGCCACCCCAAATACCCCCTGCTTTTC
GATCCACAGACCGCAGGAGGGCTCTTGGCGACAGTGGTGCCTGAGCGGGT
GGAGGCGACGATGGTGGCCTTGCGGGCTGCGGGGTATGGGGCCGCATGCG
TGATTGGAGAGGTGTGGAGGGTAGAAAAGGGGGGCGACGGGGAAAGGGAG
GGGAAAATAGAGCTGGTGCTAGATGAGGTGGGGTGTGTAGGAAATGGTAG
GAACTGATGTCCGTATAGAAAGGAGAAGAAAAGCGAAATTCTTGTCACCA
TGATATTTTCATGGCAAAAGCTTTTGGTCCTGGA

protein sequence of NO12G00270.1

>NO12G00270.1-protein ID=NO12G00270.1-protein|Name=NO12G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=918bp
MKLSLDPTPYMKDLILIGGGHAHVHVLKMWGMQPVPGVQLTLITRDLNTP
YSGMLPGHIAGHYTREDCHIDLTRLAHFAGARLVHTEACGLDPVQRTVSC
KDGRPPLPYDVLSLDIGSSPSAGVVGGHEVGITPVKPIDGLSGRWDDLLE
RARAWPVGGPPLRLLVVGGGAAGVELALAMQYRLGRVMEGGAKRVEVSLL
TKGESVLSSHPLKVRCIFLRIFKERGIMLHTQAEAARVEKVEAPDPSPSS
SLAGVLYTEDGRSFPYHECVWCTEGQPAPWLQDTGLALDEKGFVAVDDHL
QSISHPSVFAGGDICSMVRHPRPKAGVFAVRAGPPLLENIKRALRGERLV
RYTPQSTFLSLISTGDTHAVASKGHYLALEGAWLWALKDWIDRKFMRMYQ
DLPPMPPPGGLFPPPSSSFFSTSLFASLSSSFSSSAAARHSSPDDNPASS
SSSSSLYSHPMRCGGCGSKVGASILSRVLAKLDLPLSHREDILMGVGDDA
AVLLPPAPPILQVQTLDFFRAFSPRFDPFIFGQIAANHALSDCHAMNAQP
RTALALVVVPLAATENITEALLVQLLAGAAQVLNAAGCALVGGHTSEGSE
LSLGFSITGEASPSHLLYKSKTKRERVDGIGPLCVRAGHPTGWEGRKEEG
GGEKAGERNAIDAGQETGARAPSSPSSPSLPPSICPSYVLLLTKALGTGT
LLAAEGQGKGKARWEEGAVASMLQSNANAAKILWEVGQATAATDVTGFGL
VGHLGEMIKGGMGEGESEGGNEQGGVRVRLSLPSLAALQGAEACFAKDIT
SSLAPANEHHAQSLLYFPSDDRPPVGAAASATTTTTAKIKSHPKYPLLFD
PQTAGGLLATVVPERVEATMVALRAAGYGAACVIGEVWRVEKGGDGEREG
KIELVLDEVGCVGNGRN*

mRNA from alignment at chr12:86396..92680-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G00270.1 ID=NO12G00270.1|Name=NO12G00270.1|organism=Nannochloropsis oceanica|type=mRNA|length=6285bp|location=Sequence derived from alignment at chr12:86396..92680- (Nannochloropsis oceanica)
ACAGAGTGCTACGCAGGCTGAGGCAGAAGGGCAAGAGGGCCAGGAGTAGC
GTCAAGGGGAGCTAGAGGTGGATTCAAAGGTGGTATGGTGCTGGCTTGGC
TCTGCTCACTGCGTTTCCCAGCCCTGGCTTTACACTCCCACTGTCATGAC
CGCATGACCTGCCTCTTCTAGACACAAACAAATTCCATATTCCATATTCC
ATACCCACATTTGACAGGACACGGCGACGCAGCAGGGACAGCAACAGGAG
CGGTAGAATTCTTTGTTAGGCATTGCATCTCTTCCCAACGCCAGCCGTTT
GAGTGAATTGCAAAAAATAGCGGCATAGTTAACCAGCAGCCATGAAGCTC
AGGTATGTCCCACGGCAACCTTCTTTTTCAACTCCAATATTACGACAAGA
CCTCTATCAGGGAGGCAATCATTCATTCAGTTCCATCTCCACTCCTCACC
CGACTTATCCGTGGCTTGGTTTGACCCGTTGCCTTTGAGTACATCCTCCG
GTACTCATCGACCATCCACCTCATTAACCTCCCCACCCACCCACTCTCCG
CACCTAGCCTGGACCCTACCCCGTACATGAAGGACCTCATCCTCATTGGT
GGTGGACATGCCCATGTCCATGTGCTTAAGATGTGGGGCATGCAGCCGGT
GCCAGGTAGGTGGTGGAAAAGGCGTGGGAAGGAGGGAATGAAGGAGGGAG
GGAGGAAGTGGAGGGCGGATAGAGGCAAAGACGAAGAAAAGGAACGTCAA
GGCAAGGGGGAGACTTTTCTCAGAAAGTAATAAAAGTCGGATGCCTATAA
AATATTATGGTATACCCTTCACTCAAAACGACAGGGGTGCAACTGACCCT
CATCACCCGCGATCTCAACACTCCTTACTCGGGAATGCTTCCAGGTACGC
GCAAGCCCTCCCTCCCGCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCTTG
CAATTCACCGGTCTTATTCACTGCTATCACTACCTCTCTTTCTCCCTCCC
TCCCTGTTGCCCTAGGACACATCGCGGGGCACTACACGAGAGAGGACTGC
CACATCGACCTGACCCGCCTGGCGCACTTTGCCGGGGCCCGCTTGGTCCA
CACGGAGGTGAGGCAGGCAGAGAGGGAGGGAGAGAGGGAGGGGGGGCTGT
CCTGATATATTTTGTATATTAAGGTCTCTATTGCTGCCGCCGTCAAGTCA
GTGGAGTTGGTCCCAGACACACACAAAGAGGACGCGGTCTGCTCCATTGC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTATTCCCTTTCTCCATCCC
TCCCCCCCCCTCCCTTATTCCCTTTATCCATACCTCCCTCCCTTCCTCCC
TCCCTCCCAGGCGTGTGGCTTAGACCCCGTCCAGCGCACGGTCAGCTGCA
AAGACGGTCGTCCCCCTCTCCCTTATGATGTGCTCTCCCTCGATATTGGT
TCCTCGCCCAGCGCGGGTGTGGTGGGGGGACACGAGGTATGAACGCACGG
AGGGAGGGAGGGAAGGAGGGCGGCTGTGCCTATGCCTGACATGGGGCTTG
TCCTAGACGGTGTGGCGAGACGGGTTAAGGGGAGGGAGGGAGGTTAGGAA
CGAGGGAGGAGGAGGCTGAAGAGACACACAATTTTCCCGACCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTATCTCTATTGTGCCTC
GGTCTTGAAGGTGGGAATCACACCCGTGAAGCCTATCGATGGGTTGAGCG
GGCGGTGGGACGACCTGCTGGAAAGAGCGCGGGCGTGGCCGGTGGGAGGT
GAGGAGGGAGGGAGAGAAGGAGGGAAGGAAGGAGGGAAGGGAGGGAGGGG
TGGAACGGTCGCCATTGGCTTTTGATTTTGGCATTCGGGAGAGCGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGGTGTGATCAACCTCGATGTCTGGTCTTCTGTTTGACTGTGTCTCCAC
ATCCCGTCCTCCTTTTGGATGGGTGGATTCCTCCTCCTTCTTTTCACCCT
CCCCCCCCACCCTCCTCCTCCTCCTCCTCCCACGCTTTACCCGCAGGTCC
GCCGCTGCGGTTGTTGGTGGTGGGGGGAGGGGCGGCGGGTGTGGAGCTGG
CCCTGGCCATGCAATATCGACTCGGGAGGGTGATGGAGGGGGGGGCAAAG
AGGGTGGAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGAGGAAAGGGACCGGTTGTGGTGCGCATATCAGAATGTT
TCCAAATCCCCTCCGTTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCTCCCCCTCCCTCCCAAGGTCTCCCTCCTCACCAAAGGCGAGTCGGTGC
TCAGCAGCCACCCTCTGAAAGTCCGGTGTATTTTCCTACGTATTTTCAAA
GAGAGGGGCATTATGCTCCACACTCAGGCAGAGGCCGCACGCGTGGAGAA
AGTAGAAGGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGAAAGCCTCTGCTATCTGACGCCTCACTCACCACTCACTCATTCGTT
CCCTCTATCCACCTCAAGCCCCAGACCCTTCCCCCTCCTCCTCCCTGGCC
GGCGTCCTTTATACTGAGGACGGGCGTTCGTTTCCTTACCACGAGTGCGT
ATGGTGCACGGAGGGACAGCCAGCGCCGTGGCTCCAGGACACGGGTAGGG
AGGAAGGAAGGGAGGGAGGGAGGAAGGGAGAGAGGAAGAGGGAGAAAGGG
AACTTCGAGGCGGGCGGTGTTGATCAGGAAAAAACAACCGGCACAACAGT
GACACGTCCCTCTCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTTCCTTCC
GCGGCAGGACTGGCCCTGGACGAGAAGGGATTTGTGGCTGTTGACGACCA
CCTGCAGTCTATCTCCCATCCCTCCGTCTTTGCAGGCGGGGACATCTGCT
CCATGGTGCGGCATCCACGACCCAAAGTAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGGAGGGAAGTATTGGTGTATGTGTGTAAATGTGTGTGTA
TGTGTGTGTGTATGTGTGTGTATGTGTGTGTGTAAGTGTGGATTCTTAGA
GAAAGTTTATACATTTATGAGTATTGCATATACTTATAGGCAGGTGTGTT
TGCTGTGCGTGCGGGGCCTCCATTACTGGAAAATATTAAGCGGGCGCTGC
GGGGAGAGAGGCTCGTGAGGTACACACCTCAGGTGGGGAAGAGGGGGAGG
GAGGGAGGGAGGAAGGGAGGGAGGGAGAAGCTGGTAAAGAGAAAGAGACT
CAACACCCTCGCCCTCATACATACAAGTGCGACAAACACATTCTCTCACA
CACTCACACACAAGTACGACAAACACCCACATCCACTCCCTCACTCACTT
TCCCCCAGTCCACCTTTCTGTCCCTCATCTCCACGGGAGACACGCACGCT
GTGGCCTCCAAAGGCCATTATCTAGCCCTGGAGGGCGCCTGGTTGTGGGC
CCTTAAAGATTGGATCGACCGCAAGTTTATGAGGATGTATCAGGTAAAGA
GAGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAA
AGGGGAAGGGAAGAGCGGCTTTGTAGCGTTGGGGAAAAGATGGTTGTGGG
ATGGAGCTTAAAAGCGATGGCTGACCAGGAAGGTAGTTAGGATGGTAGGT
AGGTAGGTAGGGAGGGAGGGAGCGAGGGAAGAGAGCGCGAAAAGAAGGAG
GGGTTCTGAGAAGCGAGAGGTGTCAACATACATGTACACCCTATCATCCC
ATTCACAGGACCTTCCTCCCATGCCTCCTCCCGGAGGGCTTTTCCCTCCT
CCTTCCTCCTCCTTTTTTTCCACCTCCCTCTTTGCCTCCTTGTCGTCGTC
GTTCTCCTCCTCGGCTGCTGCCCGCCACTCTTCACCAGACGATAATCCTG
CCTCCTCCTCCTCCTCCTCCTCCCTATATTCACATCCCATGCGCTGCGGG
GGCTGCGGATCGAAGGTACATACTAGTCCTTACTCCGTCCCGCTAGTCCT
TCCTCCGTCGTTCTTTCCCTCCCTTCCTCCCTCCCTTCCTCCTTCCCTCC
CTCCCTCTCTTCCTTCCCCGTCCATTGCTTCATTACTCACGTATCCCTCC
CCTCCCTCCCTCCCTCCCTCCGTCTAGGTGGGCGCATCCATTCTTTCCCG
CGTGTTGGCCAAGCTAGATCTCCCCCTCTCCCACCGAGAAGACATTCTCA
TGGGTGTGGGCGACGATGCGGTGAGGGAAGGAGGGAGGGAGGGAGTAAGG
AAGGGAAGGAAGAGCGGTATCAGGAATATGTTTTATCCTCCTCTCTTACA
ACATGCGCGCACACACATACACACTGCACCCACACACACATACACATACT
CACACTCATACGTAAACACGCATATATACATACATCATACATATATATAC
CCCTGTAGGCTGTCCTGCTACCTCCAGCCCCCCCCATCCTCCAAGTGCAG
ACCCTGGACTTTTTTCGCGCCTTTTCCCCGCGCTTTGATCCCTTCATATT
TGGGCAGATCGCTGGTACGGCCCTTCTCTCCTTCCTTCCCCCTTTTTCTC
CCTCCCTCTTTCCCTCGCTTGCTTTTGTACTACTTTCGGCGCAGTAGGAA
TTATTATTGTCTTACGTCATCGCCCCTCCCTCCCTCCTTGCCTCCCTCCC
TCCTTCCCTCCCTCCCTCCCTCCATCGCTCCCTCCTTCCCTCCCTCCAGC
GAACCACGCTCTCTCCGACTGCCACGCAATGAACGCGCAACCTCGGACGG
CCCTCGCCCTGGTGGTCGTCCCTCTTGCCGCCACCGAAAACATAACCGAG
GCCCTGCTAGTGCAGCTCTTGGCCGGTGCAGCGCAGGTCGGAAGGGAAGG
AGGGATGGATGGAGGAAGGGAGGGTTGAGAGAAGGAGGGCGGGAGGGAAG
GAGGGAGGGGAGGGAAGAAGCTCTTGATTGAAGGCGTTTCTCCTGTATCT
AGGGCACCAGAAGGAAGGGAAATAGGGACTCCTGAACGTTCAAGAGGCCT
ACAATCCATTATCTCTCCCTTTCTACCTCCCTCCCTCCCTCCCTCAGGTC
TTGAACGCCGCGGGATGCGCCCTGGTCGGGGGGCACACATCGGAGGGATC
CGAGCTGTCCCTGGGCTTTTCCATAACGGGCGAGGCTTCTCCCTCCCACC
TCTTGTACAAGAGCAAGACCAAGAGGGAGCGGGTTGATGGCATTGGTCCT
CTCTGCGTCCGCGCGGGCCATCCAACGGGATGGGAGGGACGGAAGGAGGA
GGGAGGAGGAGAGAAAGCAGGAGAACGAAATGCTATTGATGCTGGACAAG
AAACAGGGGCAAGGGCACCATCATCACCCTCCTCTCCCTCCCTCCCTCCC
TCCATCTGTCCCTCCTATGTCCTTCTCCTGACCAAGGCCCTGGGAACCGG
AACGCTCCTGGCGGCAGAGGGGCAGGGAAAGGGGAAGGCAAGGTGGGAAG
AAGGGGCGGTAGCTTCCATGCTCCAGTCGAACGCGAATGCAGCAAAGATT
TTGTGGGAGGTTGGACAAGCGACAGCTGCCACGGACGTGACTGGCTTCGG
CCTAGTGGGGCACTTGGGCGAGATGATAAAGGGAGGAATGGGGGAGGGGG
AAAGCGAGGGAGGAAATGAGCAGGGCGGCGTGCGTGTCCGCCTCTCCCTT
CCTTCTCTTGCGGCCTTGCAGGGCGCGGAAGCCTGCTTTGCCAAGGATAT
TACTTCCTCTCTCGCGCCAGCAAATGAACATCATGCCCAGTCCCTCCTCT
ATTTCCCTTCCGATGATCGCCCCCCCGTAGGAGCAGCAGCATCAGCCACA
ACAACAACAACAGCAAAGATCAAAAGCCACCCCAAATACCCCCTGCTTTT
CGATCCACAGACCGCAGGAGGGCTCTTGGCGACAGTGGTGCCTGAGCGGG
TGGAGGCGACGATGGTGGCCTTGCGGGCTGCGGGGTATGGGGCCGCATGC
GTGATTGGAGAGGTGTGGAGGGTAGAAAAGGGGGGCGACGGGGAAAGGGA
GGGGAAAATAGAGCTGGTGCTAGATGAGGTGGGGTGTGTAGGAAATGGTA
GGAACTGATGTCCGTATAGAAAGGAGAAGAAAAGCGAAATTCTTGTCACC
ATGATATTTTCATGGCAAAAGCTTTTGGTCCTGGA

Coding sequence (CDS) from alignment at chr12:86396..92680-

>NO12G00270.1 ID=NO12G00270.1|Name=NO12G00270.1|organism=Nannochloropsis oceanica|type=CDS|length=2754bp|location=Sequence derived from alignment at chr12:86396..92680- (Nannochloropsis oceanica)
ATGAAGCTCAGCCTGGACCCTACCCCGTACATGAAGGACCTCATCCTCAT
TGGTGGTGGACATGCCCATGTCCATGTGCTTAAGATGTGGGGCATGCAGC
CGGTGCCAGGGGTGCAACTGACCCTCATCACCCGCGATCTCAACACTCCT
TACTCGGGAATGCTTCCAGGACACATCGCGGGGCACTACACGAGAGAGGA
CTGCCACATCGACCTGACCCGCCTGGCGCACTTTGCCGGGGCCCGCTTGG
TCCACACGGAGGCGTGTGGCTTAGACCCCGTCCAGCGCACGGTCAGCTGC
AAAGACGGTCGTCCCCCTCTCCCTTATGATGTGCTCTCCCTCGATATTGG
TTCCTCGCCCAGCGCGGGTGTGGTGGGGGGACACGAGGTGGGAATCACAC
CCGTGAAGCCTATCGATGGGTTGAGCGGGCGGTGGGACGACCTGCTGGAA
AGAGCGCGGGCGTGGCCGGTGGGAGGTCCGCCGCTGCGGTTGTTGGTGGT
GGGGGGAGGGGCGGCGGGTGTGGAGCTGGCCCTGGCCATGCAATATCGAC
TCGGGAGGGTGATGGAGGGGGGGGCAAAGAGGGTGGAGGTCTCCCTCCTC
ACCAAAGGCGAGTCGGTGCTCAGCAGCCACCCTCTGAAAGTCCGGTGTAT
TTTCCTACGTATTTTCAAAGAGAGGGGCATTATGCTCCACACTCAGGCAG
AGGCCGCACGCGTGGAGAAAGTAGAAGCCCCAGACCCTTCCCCCTCCTCC
TCCCTGGCCGGCGTCCTTTATACTGAGGACGGGCGTTCGTTTCCTTACCA
CGAGTGCGTATGGTGCACGGAGGGACAGCCAGCGCCGTGGCTCCAGGACA
CGGGACTGGCCCTGGACGAGAAGGGATTTGTGGCTGTTGACGACCACCTG
CAGTCTATCTCCCATCCCTCCGTCTTTGCAGGCGGGGACATCTGCTCCAT
GGTGCGGCATCCACGACCCAAAGCAGGTGTGTTTGCTGTGCGTGCGGGGC
CTCCATTACTGGAAAATATTAAGCGGGCGCTGCGGGGAGAGAGGCTCGTG
AGGTACACACCTCAGTCCACCTTTCTGTCCCTCATCTCCACGGGAGACAC
GCACGCTGTGGCCTCCAAAGGCCATTATCTAGCCCTGGAGGGCGCCTGGT
TGTGGGCCCTTAAAGATTGGATCGACCGCAAGTTTATGAGGATGTATCAG
GACCTTCCTCCCATGCCTCCTCCCGGAGGGCTTTTCCCTCCTCCTTCCTC
CTCCTTTTTTTCCACCTCCCTCTTTGCCTCCTTGTCGTCGTCGTTCTCCT
CCTCGGCTGCTGCCCGCCACTCTTCACCAGACGATAATCCTGCCTCCTCC
TCCTCCTCCTCCTCCCTATATTCACATCCCATGCGCTGCGGGGGCTGCGG
ATCGAAGGTGGGCGCATCCATTCTTTCCCGCGTGTTGGCCAAGCTAGATC
TCCCCCTCTCCCACCGAGAAGACATTCTCATGGGTGTGGGCGACGATGCG
GCTGTCCTGCTACCTCCAGCCCCCCCCATCCTCCAAGTGCAGACCCTGGA
CTTTTTTCGCGCCTTTTCCCCGCGCTTTGATCCCTTCATATTTGGGCAGA
TCGCTGCGAACCACGCTCTCTCCGACTGCCACGCAATGAACGCGCAACCT
CGGACGGCCCTCGCCCTGGTGGTCGTCCCTCTTGCCGCCACCGAAAACAT
AACCGAGGCCCTGCTAGTGCAGCTCTTGGCCGGTGCAGCGCAGGTCTTGA
ACGCCGCGGGATGCGCCCTGGTCGGGGGGCACACATCGGAGGGATCCGAG
CTGTCCCTGGGCTTTTCCATAACGGGCGAGGCTTCTCCCTCCCACCTCTT
GTACAAGAGCAAGACCAAGAGGGAGCGGGTTGATGGCATTGGTCCTCTCT
GCGTCCGCGCGGGCCATCCAACGGGATGGGAGGGACGGAAGGAGGAGGGA
GGAGGAGAGAAAGCAGGAGAACGAAATGCTATTGATGCTGGACAAGAAAC
AGGGGCAAGGGCACCATCATCACCCTCCTCTCCCTCCCTCCCTCCCTCCA
TCTGTCCCTCCTATGTCCTTCTCCTGACCAAGGCCCTGGGAACCGGAACG
CTCCTGGCGGCAGAGGGGCAGGGAAAGGGGAAGGCAAGGTGGGAAGAAGG
GGCGGTAGCTTCCATGCTCCAGTCGAACGCGAATGCAGCAAAGATTTTGT
GGGAGGTTGGACAAGCGACAGCTGCCACGGACGTGACTGGCTTCGGCCTA
GTGGGGCACTTGGGCGAGATGATAAAGGGAGGAATGGGGGAGGGGGAAAG
CGAGGGAGGAAATGAGCAGGGCGGCGTGCGTGTCCGCCTCTCCCTTCCTT
CTCTTGCGGCCTTGCAGGGCGCGGAAGCCTGCTTTGCCAAGGATATTACT
TCCTCTCTCGCGCCAGCAAATGAACATCATGCCCAGTCCCTCCTCTATTT
CCCTTCCGATGATCGCCCCCCCGTAGGAGCAGCAGCATCAGCCACAACAA
CAACAACAGCAAAGATCAAAAGCCACCCCAAATACCCCCTGCTTTTCGAT
CCACAGACCGCAGGAGGGCTCTTGGCGACAGTGGTGCCTGAGCGGGTGGA
GGCGACGATGGTGGCCTTGCGGGCTGCGGGGTATGGGGCCGCATGCGTGA
TTGGAGAGGTGTGGAGGGTAGAAAAGGGGGGCGACGGGGAAAGGGAGGGG
AAAATAGAGCTGGTGCTAGATGAGGTGGGGTGTGTAGGAAATGGTAGGAA
CTGA

Synonyms

Publications