Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr12 genome chr12:86396..92680 -
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO12G00270.1 vs.
Match: EWM25994.1 (water dikinase [Nannochloropsis gaditana])
HSP 1 Score: 649.0 bits (1673), Expect = 2.100e-182
Identity = 373/630 (59.21%), Postives = 443/630 (70.32%), Query Frame = 0
Query: 284 TGLALDEKGFVAVDDHLQSISHPSVFAGGDICSMVRHPRPKAGVFAVRAGPPLLENIKRALRGERLVRYTPQSTFLSLISTGDTHAVASKGHYLALEGAWLWALKDWIDRKFMRMYQDLPPMPPPGGLFPPPSSSFFSTSLFASLSSSFSSSAAARHSSPDDNPASSSSSSSLYSHPMRCGGCGSKVGASILSRVLAKLDLPLSHREDILMGVGDDAAVLLPPAPPILQVQTLDFFRAFSPRFDPFIFGQIAANHALSDCHAMNAQPRTALALVVVPLAATENITEALLVQLLAGAAQVLNAAGCALVGGHTSEGSELSLGFSITGEASPSHLLYKSKTKRERVDGIGPLCVRAGHPTGWEGRKEEGGGEKAGERNAIDAGQETGARAPSSPSSPSLPPSICPSYVLLLTKALGTGTLLAAEGQGKGKARWEEGAVASMLQSNANAAKILWEVGQATAATDVTGFGLVGHLGEMIKGGMG-EGE-----SEGGNEQGGVRVRLSLPSLAALQGAEACFAKDITSSLAPANEHHAQSLLYFPSDDRPPVGAAASATTTTTAKIKSHPKYPLLFDPQTAGGLLATVVPERVEATMVALRAAGYGAACVIGEVWRVEKGGDGEREGKIELVLD 908
TGL LDEKGF+AV+ HLQS+S P VFA GD+ SM+ +PRPKAGVFAVRAGPPLL N++ ALRG L YTPQSTFLSLISTGD +A+ASKG LEGAWLW +KD IDRKFMRMYQDLP M P PP S ++LSS F+ S S P +P +++S ++SH MRCGGCGSKVGASILSRVL++++ S EDIL+G+GDDAAV PP PP+LQ+QTLDFFR F PRFDP++FGQIAANHALSDCHAMNA+PRTALA VVPLAA+E +TE LL+QLLAGA QVLNAAGC LVGGHTSEG+EL+LGF+ITGEA PS LLYK R + H + +E E R + + R+ S SSPS + P++ LLLTKALGTGT++AA GQG+G A+WE GAVASMLQSNA AA ILW G A AATDVTGFG++GHL EMI+G G GE + G ++GGVR RL L SL AL GAE C AK ITSSLAPAN+HHA+ LL ++ + T+ ++ H KYPLLFDPQTAGGLLA V ++V T+ AL+AAGY AACVIGEVW EK + IELV+D
Sbjct: 3 TGLTLDEKGFLAVNRHLQSVSDPYVFAAGDVSSMLENPRPKAGVFAVRAGPPLLRNLQNALRGATLATYTPQSTFLSLISTGDKYAIASKGSVFVLEGAWLWKMKDHIDRKFMRMYQDLPSMDPSTSSSSPPFS-------LSALSSFFTPSHPPNPSDPGSSPGEAATS--VHSHTMRCGGCGSKVGASILSRVLSRIEQSHSCNEDILLGMGDDAAVFRPPPPPLLQIQTLDFFRIFFPRFDPYVFGQIAANHALSDCHAMNARPRTALAQAVVPLAASEKLTEGLLLQLLAGAVQVLNAAGCTLVGGHTSEGTELTLGFAITGEAHPSQLLYKKGILRN-----------SSHL-----KNDEEESEDVKRRRLDGMTRMSPGRSLSRASSPSTSFAPVPTFSLLLTKALGTGTIMAAAGQGQGSAKWEAGAVASMLQSNAKAADILWREGGAIAATDVTGFGVLGHLTEMIRGDNGMVGEDNLLTTAGTGQEGGVRARLILSSLPALPGAEDCLAKGITSSLAPANQHHARHLL----------RNVSTVAHSNTSSLRQHSKYPLLFDPQTAGGLLACVPVDKVGITLHALQAAGYEAACVIGEVWNDEK-----TDVHIELVID 592
The following BLAST results are available for this feature:
BLAST of NO12G00270.1 vs.
Analysis Date: 2017-10-25 (
Homology annotation for N. oceanica IMET1 )
Total hits: 1
500 1000 1500 2000 2500 3000 Expect = 2.10e-182 / Id = 59.21 Sequence EWM25994.1
Match Name E-value Identity Description
EWM25994.1 2.100e-182 59.21 water dikinase [Nannochloropsis gaditana] [more]
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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence
>NO12G00270.1 ID=NO12G00270.1|Name=NO12G00270.1|organism=Nannochloropsis oceanica|type=mRNA|length=3034bp back to top protein sequence of NO12G00270.1
>NO12G00270.1-protein ID=NO12G00270.1-protein|Name=NO12G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=918bp back to top mRNA from alignment at chr12:86396..92680-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO12G00270.1 ID=NO12G00270.1|Name=NO12G00270.1|organism=Nannochloropsis oceanica|type=mRNA|length=6285bp|location=Sequence derived from alignment at chr12:86396..92680- (Nannochloropsis oceanica)ATGAAGCTC
AG GTATGTCCCACGGCAACCTTCTTTTTCAACTCCAATATTACGACAAGA
CCTCTATCAGGGAGGCAATCATTCATTCAGTTCCATCTCCACTCCTCACC
CGACTTATCCGTGGCTTGGTTTGACCCGTTGCCTTTGAGTACATCCTCCG
GTACTCATCGACCATCCACCTCATTAACCTCCCCACCCACCCACTCTCCG
CACCTAGCCTGGACCCTACCCCGTACATGAAGGACCTCATCCTCATTGGT
GGTGGACATGCCCATGTCCATGTGCTTAAGATGTGGGGCATGCAGCCGGT
GCCAG GTAGGTGGTGGAAAAGGCGTGGGAAGGAGGGAATGAAGGAGGGAG
GGAGGAAGTGGAGGGCGGATAGAGGCAAAGACGAAGAAAAGGAACGTCAA
GGCAAGGGGGAGACTTTTCTCAGAAAGTAATAAAAGTCGGATGCCTATAA
AATATTATGGTATACCCTTCACTCAAAACGACAGGGGTGCAACTGACCCT
CATCACCCGCGATCTCAACACTCCTTACTCGGGAATGCTTCCAG GTACGC
GCAAGCCCTCCCTCCCGCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCTTG
CAATTCACCGGTCTTATTCACTGCTATCACTACCTCTCTTTCTCCCTCCC
TCCCTGTTGCCCTAGGACACATCGCGGGGCACTACACGAGAGAGGACTGC
CACATCGACCTGACCCGCCTGGCGCACTTTGCCGGGGCCCGCTTGGTCCA
CACGGAG GTGAGGCAGGCAGAGAGGGAGGGAGAGAGGGAGGGGGGGCTGT
CCTGATATATTTTGTATATTAAGGTCTCTATTGCTGCCGCCGTCAAGTCA
GTGGAGTTGGTCCCAGACACACACAAAGAGGACGCGGTCTGCTCCATTGC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTATTCCCTTTCTCCATCCC
TCCCCCCCCCTCCCTTATTCCCTTTATCCATACCTCCCTCCCTTCCTCCC
TCCCTCCCAGGCGTGTGGCTTAGACCCCGTCCAGCGCACGGTCAGCTGCA
AAGACGGTCGTCCCCCTCTCCCTTATGATGTGCTCTCCCTCGATATTGGT
TCCTCGCCCAGCGCGGGTGTGGTGGGGGGACACGAG GTATGAACGCACGG
AGGGAGGGAGGGAAGGAGGGCGGCTGTGCCTATGCCTGACATGGGGCTTG
TCCTAGACGGTGTGGCGAGACGGGTTAAGGGGAGGGAGGGAGGTTAGGAA
CGAGGGAGGAGGAGGCTGAAGAGACACACAATTTTCCCGACCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTATCTCTATTGTGCCTC
GGTCTTGAAGGTGGGAATCACACCCGTGAAGCCTATCGATGGGTTGAGCG
GGCGGTGGGACGACCTGCTGGAAAGAGCGCGGGCGTGGCCGGTGGGAG GT
GAGGAGGGAGGGAGAGAAGGAGGGAAGGAAGGAGGGAAGGGAGGGAGGGG
TGGAACGGTCGCCATTGGCTTTTGATTTTGGCATTCGGGAGAGCGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGGTGTGATCAACCTCGATGTCTGGTCTTCTGTTTGACTGTGTCTCCAC
ATCCCGTCCTCCTTTTGGATGGGTGGATTCCTCCTCCTTCTTTTCACCCT
CCCCCCCCACCCTCCTCCTCCTCCTCCTCCCACGCTTTACCCGCAGGTCC
GCCGCTGCGGTTGTTGGTGGTGGGGGGAGGGGCGGCGGGTGTGGAGCTGG
CCCTGGCCATGCAATATCGACTCGGGAGGGTGATGGAGGGGGGGGCAAAG
AGGGTGGAG GTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGAGGAAAGGGACCGGTTGTGGTGCGCATATCAGAATGTT
TCCAAATCCCCTCCGTTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCTCCCCCTCCCTCCCAAGGTCTCCCTCCTCACCAAAGGCGAGTCGGTGC
TCAGCAGCCACCCTCTGAAAGTCCGGTGTATTTTCCTACGTATTTTCAAA
GAGAGGGGCATTATGCTCCACACTCAGGCAGAGGCCGCACGCGTGGAGAA
AGTAGAAG GTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGAAAGCCTCTGCTATCTGACGCCTCACTCACCACTCACTCATTCGTT
CCCTCTATCCACCTCAAGCCCCAGACCCTTCCCCCTCCTCCTCCCTGGCC
GGCGTCCTTTATACTGAGGACGGGCGTTCGTTTCCTTACCACGAGTGCGT
ATGGTGCACGGAGGGACAGCCAGCGCCGTGGCTCCAGGACACGG GTAGGG
AGGAAGGAAGGGAGGGAGGGAGGAAGGGAGAGAGGAAGAGGGAGAAAGGG
AACTTCGAGGCGGGCGGTGTTGATCAGGAAAAAACAACCGGCACAACAGT
GACACGTCCCTCTCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTTCCTTCC
GCGGCAGGACTGGCCCTGGACGAGAAGGGATTTGTGGCTGTTGACGACCA
CCTGCAGTCTATCTCCCATCCCTCCGTCTTTGCAGGCGGGGACATCTGCT
CCATGGTGCGGCATCCACGACCCAAA GTAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGGAGGGAAGTATTGGTGTATGTGTGTAAATGTGTGTGTA
TGTGTGTGTGTATGTGTGTGTATGTGTGTGTGTAAGTGTGGATTCTTAGA
GAAAGTTTATACATTTATGAGTATTGCATATACTTATAGGCAGGTGTGTT
TGCTGTGCGTGCGGGGCCTCCATTACTGGAAAATATTAAGCGGGCGCTGC
GGGGAGAGAGGCTCGTGAGGTACACACCTCAG GTGGGGAAGAGGGGGAGG
GAGGGAGGGAGGAAGGGAGGGAGGGAGAAGCTGGTAAAGAGAAAGAGACT
CAACACCCTCGCCCTCATACATACAAGTGCGACAAACACATTCTCTCACA
CACTCACACACAAGTACGACAAACACCCACATCCACTCCCTCACTCACTT
TCCCCCAGTCCACCTTTCTGTCCCTCATCTCCACGGGAGACACGCACGCT
GTGGCCTCCAAAGGCCATTATCTAGCCCTGGAGGGCGCCTGGTTGTGGGC
CCTTAAAGATTGGATCGACCGCAAGTTTATGAGGATGTATCAG GTAAAGA
GAGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAA
AGGGGAAGGGAAGAGCGGCTTTGTAGCGTTGGGGAAAAGATGGTTGTGGG
ATGGAGCTTAAAAGCGATGGCTGACCAGGAAGGTAGTTAGGATGGTAGGT
AGGTAGGTAGGGAGGGAGGGAGCGAGGGAAGAGAGCGCGAAAAGAAGGAG
GGGTTCTGAGAAGCGAGAGGTGTCAACATACATGTACACCCTATCATCCC
ATTCACAGGACCTTCCTCCCATGCCTCCTCCCGGAGGGCTTTTCCCTCCT
CCTTCCTCCTCCTTTTTTTCCACCTCCCTCTTTGCCTCCTTGTCGTCGTC
GTTCTCCTCCTCGGCTGCTGCCCGCCACTCTTCACCAGACGATAATCCTG
CCTCCTCCTCCTCCTCCTCCTCCCTATATTCACATCCCATGCGCTGCGGG
GGCTGCGGATCGAAG GTACATACTAGTCCTTACTCCGTCCCGCTAGTCCT
TCCTCCGTCGTTCTTTCCCTCCCTTCCTCCCTCCCTTCCTCCTTCCCTCC
CTCCCTCTCTTCCTTCCCCGTCCATTGCTTCATTACTCACGTATCCCTCC
CCTCCCTCCCTCCCTCCCTCCGTCTAGGTGGGCGCATCCATTCTTTCCCG
CGTGTTGGCCAAGCTAGATCTCCCCCTCTCCCACCGAGAAGACATTCTCA
TGGGTGTGGGCGACGATGCG GTGAGGGAAGGAGGGAGGGAGGGAGTAAGG
AAGGGAAGGAAGAGCGGTATCAGGAATATGTTTTATCCTCCTCTCTTACA
ACATGCGCGCACACACATACACACTGCACCCACACACACATACACATACT
CACACTCATACGTAAACACGCATATATACATACATCATACATATATATAC
CCCTGTAGGCTGTCCTGCTACCTCCAGCCCCCCCCATCCTCCAAGTGCAG
ACCCTGGACTTTTTTCGCGCCTTTTCCCCGCGCTTTGATCCCTTCATATT
TGGGCAGATCGCTG GTACGGCCCTTCTCTCCTTCCTTCCCCCTTTTTCTC
CCTCCCTCTTTCCCTCGCTTGCTTTTGTACTACTTTCGGCGCAGTAGGAA
TTATTATTGTCTTACGTCATCGCCCCTCCCTCCCTCCTTGCCTCCCTCCC
TCCTTCCCTCCCTCCCTCCCTCCATCGCTCCCTCCTTCCCTCCCTCCAGC
GAACCACGCTCTCTCCGACTGCCACGCAATGAACGCGCAACCTCGGACGG
CCCTCGCCCTGGTGGTCGTCCCTCTTGCCGCCACCGAAAACATAACCGAG
GCCCTGCTAGTGCAGCTCTTGGCCGGTGCAGCGCAG GTCGGAAGGGAAGG
AGGGATGGATGGAGGAAGGGAGGGTTGAGAGAAGGAGGGCGGGAGGGAAG
GAGGGAGGGGAGGGAAGAAGCTCTTGATTGAAGGCGTTTCTCCTGTATCT
AGGGCACCAGAAGGAAGGGAAATAGGGACTCCTGAACGTTCAAGAGGCCT
ACAATCCATTATCTCTCCCTTTCTACCTCCCTCCCTCCCTCCCTCAGGTC
TTGAACGCCGCGGGATGCGCCCTGGTCGGGGGGCACACATCGGAGGGATC
CGAGCTGTCCCTGGGCTTTTCCATAACGGGCGAGGCTTCTCCCTCCCACC
TCTTGTACAAGAGCAAGACCAAGAGGGAGCGGGTTGATGGCATTGGTCCT
CTCTGCGTCCGCGCGGGCCATCCAACGGGATGGGAGGGACGGAAGGAGGA
GGGAGGAGGAGAGAAAGCAGGAGAACGAAATGCTATTGATGCTGGACAAG
AAACAGGGGCAAGGGCACCATCATCACCCTCCTCTCCCTCCCTCCCTCCC
TCCATCTGTCCCTCCTATGTCCTTCTCCTGACCAAGGCCCTGGGAACCGG
AACGCTCCTGGCGGCAGAGGGGCAGGGAAAGGGGAAGGCAAGGTGGGAAG
AAGGGGCGGTAGCTTCCATGCTCCAGTCGAACGCGAATGCAGCAAAGATT
TTGTGGGAGGTTGGACAAGCGACAGCTGCCACGGACGTGACTGGCTTCGG
CCTAGTGGGGCACTTGGGCGAGATGATAAAGGGAGGAATGGGGGAGGGGG
AAAGCGAGGGAGGAAATGAGCAGGGCGGCGTGCGTGTCCGCCTCTCCCTT
CCTTCTCTTGCGGCCTTGCAGGGCGCGGAAGCCTGCTTTGCCAAGGATAT
TACTTCCTCTCTCGCGCCAGCAAATGAACATCATGCCCAGTCCCTCCTCT
ATTTCCCTTCCGATGATCGCCCCCCCGTAGGAGCAGCAGCATCAGCCACA
ACAACAACAACAGCAAAGATCAAAAGCCACCCCAAATACCCCCTGCTTTT
CGATCCACAGACCGCAGGAGGGCTCTTGGCGACAGTGGTGCCTGAGCGGG
TGGAGGCGACGATGGTGGCCTTGCGGGCTGCGGGGTATGGGGCCGCATGC
GTGATTGGAGAGGTGTGGAGGGTAGAAAAGGGGGGCGACGGGGAAAGGGA
GGGGAAAATAGAGCTGGTGCTAGATGAGGTGGGGTGTGTAGGAAATGGTA
GGAACTGA back to top Coding sequence (CDS) from alignment at chr12:86396..92680-
>NO12G00270.1 ID=NO12G00270.1|Name=NO12G00270.1|organism=Nannochloropsis oceanica|type=CDS|length=2754bp|location=Sequence derived from alignment at chr12:86396..92680- (Nannochloropsis oceanica) back to top