NO12G00160.3, NO12G00160.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G00160.3
Unique Name	NO12G00160.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3811
Alignment location	chr12:40745..46563 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:40745..46563 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G00160.3 vs.
Match: EWM26013.1 (hypothetical protein Naga_100150g13 [Nannochloropsis gaditana])

HSP 1 Score: 152.1 bits (383), Expect = 7.500e-33
Identity = 109/301 (36.21%), Postives = 164/301 (54.49%), Query Frame = 0

Query:  247 GSKGGGGGERGGMR---------KGGREGGRGTGGWSEVDSIVQTLTEQALPRVIQDATSQHVANIMNALARLEYHPRSPTLIPSLLVQGLATVETAMPQHIANSLNGLARLGGEGKGEERDTFIQACINVTLSTGFSRFEARDVSSMLNSMVRIGGVEEKYAQ-LPAFLSRARARVLVVLGRANSQDISLILNALSRIGLSHAGQKQ-EEFVLTLLHQLLSAPHLNNSLTPQGVATIINAASKLLSSPSSPATILKAHHLYRPLMLRACDLLQGMDSQGLSLTIAGL-GKLSRGRSGTRE 536
            G +GGG GE+  M          +GG+EGGR                              ++  ++    RL Y  RSP  +P+LL  G A V+ A P+ +  SL  LA L    + E +D F+++C+ V LST FS+F+A D++S+L S++R+   +    + +  FL  A AR ++V+  +++Q+I L+L+ LS    + AG ++ E+  L+LL +LL  P LN +L PQ  AT+++AA +L SSPSS  +  +  HLYRPLMLRAC+LL  MD+Q       G  G  +RGR G RE
Sbjct:    4 GREGGGEGEKVWMVDFPKGWVVWEGGQEGGRA------------------------GPLLSYMRRLLTFPYRLHYRARSPAPLPALLAHGRAVVKDARPRELVRSLQALALLDRGRRAEGQDAFVKSCMTVALSTRFSKFQAGDIASLLESLLRLAAWQGYEPETVDTFLRVALARYMLVMEASSTQEIVLVLHILSCTPRAGAGGRRLEDLALSLLQRLLETPSLNEALKPQTAATLVSAAGRLFSSPSSAESSHRVKHLYRPLMLRACELLGEMDNQVGGREGGGKEGGRARGREGGRE 280

The following BLAST results are available for this feature:

BLAST of NO12G00160.3 vs.

BLAST of NO12G00160.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM26013.1	7.500e-33	36.21	hypothetical protein Naga_100150g13 [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G00160	NO12G00160	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00160.3	NO12G00160.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00160.3.cds1	NO12G00160.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00160.3.cds2	NO12G00160.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00160.3.cds3	NO12G00160.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00160.3.cds4	NO12G00160.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00160.3.cds5	NO12G00160.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00160.3.cds6	NO12G00160.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00160.3.cds7	NO12G00160.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00160.3.cds8	NO12G00160.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00160.3.cds9	NO12G00160.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:40745..46563+
coding sequence from alignment at chr12:40745..46563+

mRNA sequence

>NO12G00160.3 ID=NO12G00160.3|Name=NO12G00160.3|organism=Nannochloropsis oceanica|type=mRNA|length=3811bp
CATAGCTGGCTTGCCTTGACCTCACGTCCTCTGTCCATAATTTCCCCTCC
AACCTCCACACACCAACACGCAGAGCCAGGAGGTCGAGGAGATCAGAAGC
GCCTTGGGTAAAAGGCACAGACTACATAATGCACCCGTAGGACACCCGTG
ACCTCGACCATGAACCTCCAGGCTGCCCCAAGATGGAGGGTTAGACAAGT
CGACACCAGTACTTTGAGAAGAAACGGTGGTAGCAGCAGCATTTCCCCTT
TCCTGTGCAGCCTCCTCCTTTTTGCCCTGGCTCCCAGCACTACGACCCAC
GCCTTTTTCCATCCATGTCCAACAGTCCCTGTATCGGAAACCCATCGCCG
TCTTCCCCCCCTAATTCCTTCCAACGCTGCCGCAGCCTCCGCAGCAGGCA
CCCCTTCTCCTAATTTCCTCCCTCCCCCGTCCTCTCTCACCCCAAGGGAG
ATCAACCAGGCCATAATCTCTGCCGAGGGGGATGCCCTGGCGCTATTGGA
TGTGACGGCGCAGCATGTAGGGGGCTTTGACAAAGTGAACTGTGCGACCA
TGATTAACAGATTGTCCCGTGTAGCCGCTGCCTTGTCTCCTCCTTCCTAC
CGAAGCAAGCAAGGAAAAGGTCGGGGTCGGAAGGATGAGCAGCAGTACCT
CCTTTCCCTACTGTATGATCGTACGGCGGCCTTGCTACCGGACTGCGACG
CCCGCCAGTTGGCAAACATCATGAATGGCCTGGGCAAGCTGCACGTGAAT
CCTTCCTCCCTCTCGCCCTCCTTCCTGACATCCTTCGCTCAAGGGGTAGA
GAGAGAGGGAGGGTGGGAGGGAAGGGCAGGTGGCTTCTCGATCCAGGAAG
TGACAAATACCCTGACTGGAGTGAGCTACATCTTTCCTGGGGCCTTTGGT
TCCAAAGGAGGAGGGGGAGGAGAGAGGGGGGGAATGAGGAAGGGAGGGAG
GGAGGGAGGGAGGGGGACAGGGGGATGGAGCGAGGTGGACAGTATTGTAC
AGACACTGACGGAGCAGGCGTTGCCGAGAGTCATCCAAGACGCCACCTCG
CAGCATGTGGCCAACATTATGAACGCCCTTGCACGGCTGGAGTACCATCC
CCGCTCGCCCACCCTCATCCCCTCCCTCCTCGTCCAGGGGCTGGCCACGG
TCGAGACGGCGATGCCCCAACATATTGCCAACAGCTTGAACGGGTTGGCC
CGGCTGGGGGGAGAGGGGAAGGGGGAGGAGAGGGACACCTTCATACAGGC
ATGCATTAATGTGACGCTCTCCACGGGCTTCTCCCGATTCGAGGCCAGAG
ACGTGTCGTCGATGCTAAACAGCATGGTTCGCATAGGGGGCGTGGAGGAA
AAATATGCCCAGCTCCCAGCCTTCCTCTCCCGAGCTCGTGCCCGTGTTCT
TGTCGTTTTGGGGAGAGCGAACTCCCAAGACATCTCCCTCATATTAAATG
CACTCTCTCGGATAGGCCTCAGTCACGCAGGGCAAAAACAAGAGGAGTTT
GTGCTGACGCTTTTGCACCAGCTGTTGTCGGCGCCTCACCTCAACAACAG
CCTGACACCGCAGGGCGTCGCCACCATCATCAACGCAGCGAGCAAGCTCC
TCTCCTCCCCTTCCTCCCCCGCGACCATCCTCAAGGCACACCACCTCTAC
CGGCCCTTGATGCTTCGAGCCTGCGATTTGCTGCAGGGGATGGACAGCCA
GGGCCTCTCTCTGACCATCGCCGGCCTTGGCAAGCTCTCCCGCGGCCGCA
GCGGGACCCGAGAGCCCATCCTCAGTCGATTTCTCGCCGTCTCGTCCCCC
TTCCTTGCCTCCTTCACACCCCAGCACCTTTCGGTGTCCGTGCATGGGAT
TAGCCTCTTTGATCGTCCGCCGCCCACGGAGTACATGGAGAGGGTGCAGG
AGGGTGAGGGAGGGAGGGGAGGAGAGAGGGGAAGGGGAGGAAAAGAAGAG
AAGTATGAAAGTGGATGGTGCACCGATTCAAATGTATGCACAGATACACA
CATATTTACTCACACATATACACGCTACAGCTGTCTTGCCCCACCTGAGC
AGCTTCACCTTACAGCAGCTCGCCCTGACGCTGCACGGGTACGTCGTCGT
CTCCCCTTCATCCTTCCTCCCTCCCTCCCTCCCATTCTCCATCGCCCTCA
AGCTCATCCTGACTACCCCCCTCCCCAGCATGGCCAAGCTAGGACACCAC
CCAGGCGACCTCTTTCTCTCCGCTTTCCTCCCCGCCGTCCAGCAACGCCT
CGCGCCCCCCGTCCCCGGCCGAGGAGGGGGAGGGGGAGGAGGAGCAAAAC
CCTCCCTCCCTCGACCCGAGCCAGGGAACAACCTCCCTCAGAACCTGTCC
CTTGTACTAGTGGCTCTTGCAGTGCTGCAATATATTCCCTCCTCCTCCTT
CTGGGAGGCGTTCACGCAGGCCCTCCTCTCCCTTACCAATTTACCTCCTC
CTCCTCCTGCTGCTGCTACTGCTGCTGCAGCTGCTGGAGGCCAGGCAGCG
AATCAGCCCTCTCTCCCCCGCTCCCTCAGGCTTATCGACGTTTCCTCCTG
CCTGTGGGCTTTGGCTGCGCTGGATTTTCCTCCCTCCCTACCGCCCACCC
TCCTTTCCGCCCTCCTTGGACGGCTCGAGGCCCTGTTGGAGGCCGGGGAG
GAGGTGGAGCTGGAGGCAGCGAAACAGGTGAGTGAAGGAATGAGGGAGGG
AAGGAAGGAGGAAGGGAGGGAGGGAACCAAGGGGGCCCGTTATCCCTGGA
AGACAAGTTCTGAGGGTTTAGTCCCCCATCCCCTTGCGTTTGTCTAAATC
TCTACGCTACAACACAGCTGAAGCAATTCGCTCTCGCCGTCGACCTCTCC
CACTCCCCCTTCCCCTTCCTCCCTTCCTCCCTTCCGACCTGGTCCTCCCT
CCGCGGCCTCATCGAGACAAAGGCCTGGCTGCCCCACGCCCAAGAAGAGT
ATTGCCGCAGCGACGAGGAAGGGGAAGATAGGTATGTCGACCGCCATCCC
TCCCTCCCTCCCTCCCCCCCTCTCTCCTATTGGTCACCCACCACCATCCC
TCCTCCCCTCCCTCAGAGACGGCATCATTACCTCACCCATCCAGCTGGAG
GTGGAGCATGTCCTCCGTGAGCTTGGGTTCCCGTGCAAGGGAGAAGTTCA
CTGGGGCCCCTTCTCCCTCGACCTTCTCGTCTTCCCGCCCCCCCCTCACG
AGGGAGGAGCTACCTCTTCCTCCCCCCCTTCCTCCTCGAGCAGCAGCAAG
CTTGCCCTCCCTCTCGTCCTGGAGGTGGATGGCGCCAGCCACTTTTTCCA
AAACCTGAATCCTCGGACTCCCAGAGGGCACACTGTCCTCAAGAGGAGAA
TATTGGAGGGCCTGGTGGGCAAGCTGTGGGGTGGGGTGGTGGTGCTGACC
ACAGAAGAATGGAATGTCTGCGAAAGCGACAATCCCGCCCTGAGCTACTC
ACCCTCGGATTACACGCACAATCTGCAGCGAGACAGCGAGGAGGAGCACG
TGCGGAAGAAGATGTTGCTCAAGGAGAAAGTGAAGGAAGCTTTCCTAGGC
GGGCGGAGATAGAGTGGGTAGGAAGGGAAGGAGCAACCGAAGGAAAGTGA
AGAAAAGAATGTCTGTTTCCAAGCCATTAGAAACATCAACAGAAGTGGCT
TTCCTATGATCATGCATGACTGCCACATAAAATAAAACAAAAATGCATGC
TATGCAGCACGTAACTTATGTAAGGTTCGGTTGAGAGATTGACGACTGAA
GCCAAAGAAAAAGGACAAACTGCTAGTTACATGACGGCGACATGCGTGGC
TTTTGGAGGAA

protein sequence of NO12G00160.3

>NO12G00160.3-protein ID=NO12G00160.3-protein|Name=NO12G00160.3|organism=Nannochloropsis oceanica|type=polypeptide|length=842bp
MNLQAAPRWRVRQVDTSTLRRNGGSSSISPFLCSLLLFALAPSTTTHAFF
HPCPTVPVSETHRRLPPLIPSNAAAASAAGTPSPNFLPPPSSLTPREINQ
AIISAEGDALALLDVTAQHVGGFDKVNCATMINRLSRVAAALSPPSYRSK
QGKGRGRKDEQQYLLSLLYDRTAALLPDCDARQLANIMNGLGKLHVNPSS
LSPSFLTSFAQGVEREGGWEGRAGGFSIQEVTNTLTGVSYIFPGAFGSKG
GGGGERGGMRKGGREGGRGTGGWSEVDSIVQTLTEQALPRVIQDATSQHV
ANIMNALARLEYHPRSPTLIPSLLVQGLATVETAMPQHIANSLNGLARLG
GEGKGEERDTFIQACINVTLSTGFSRFEARDVSSMLNSMVRIGGVEEKYA
QLPAFLSRARARVLVVLGRANSQDISLILNALSRIGLSHAGQKQEEFVLT
LLHQLLSAPHLNNSLTPQGVATIINAASKLLSSPSSPATILKAHHLYRPL
MLRACDLLQGMDSQGLSLTIAGLGKLSRGRSGTREPILSRFLAVSSPFLA
SFTPQHLSVSVHGISLFDRPPPTEYMERVQEGEGGRGGERGRGGKEEKYE
SGWCTDSNVCTDTHIFTHTYTRYSCLAPPEQLHLTAARPDAARVRRRLPF
ILPPSLPPILHRPQAHPDYPPPQHGQARTPPRRPLSLRFPPRRPATPRAP
RPRPRRGRGRRSKTLPPSTRAREQPPSEPVPCTSGSCSAAIYSLLLLLGG
VHAGPPLPYQFTSSSSCCCYCCCSCWRPGSESALSPPLPQAYRRFLLPVG
FGCAGFSSLPTAHPPFRPPWTARGPVGGRGGGGAGGSETGE*

mRNA from alignment at chr12:40745..46563+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G00160.3 ID=NO12G00160.3|Name=NO12G00160.3|organism=Nannochloropsis oceanica|type=mRNA|length=5819bp|location=Sequence derived from alignment at chr12:40745..46563+ (Nannochloropsis oceanica)
CATAGCTGGCTTGCCTTGACCTCACGTCCTCTGTCCATAATTTCCCCTCC
AACCTCCACACACCAACACGCAGAGCCAGGAGGTCGAGGAGATCAGAAGC
GCCTTGGGTAAAAGGCACAGACTACATAATGCACCCGTAGGACACCCGTG
ACCTCGACCATGAACCTCCAGGCTGCCCCAAGATGGAGGGTTAGACAAGT
CGACACCAGTACTTTGAGAAGAAACGGTGGTAGCAGCAGCATTTCCCCTT
TCCTGTGCAGCCTCCTCCTTTTTGCCCTGGCTCCCAGCACTACGACCCAC
GCCTTTTTCCATCCATGTCCAACAGTCCCTGTATCGGAAACCCATCGCCG
TCTTCCCCCCCTAATTCCTTCCAACGCTGCCGCAGCCTCCGCAGCAGGCA
CCCCTTCTCCTAATTTCCTCCCTCCCCCGTCCTCTCTCACCCCAAGGGAG
ATCAACCAGGCCATAATCTCTGCCGAGGGGGATGCCCTGGCGCTATTGGA
TGTGACGGCGCAGCATGTAGGGGGCTTTGACAAAGTGAACTGTGCGACCA
TGATTAACAGGTACGATGACCATAGACAAGTTGGAGAGCAATTGAGAGTG
AGTGGTCAACCTCATCTCCTCTGCACATACGCACACATACACGACACAAT
AATGACACGCAGATTGTCCCGTGTAGCCGCTGCCTTGTCTCCTCCTTCCT
ACCGAAGCAAGCAAGGAAAAGGTCGGGGTCGGAAGGATGAGCAGCAGTAC
CTCCTTTCCCTACTGTATGATCGTACGGCGGCCTTGCTACCGGACTGCGA
CGCCCGCCAGGTAGGCAGGAAGGGAGAGAGGGGGGGAGGAAGGGAGGGGT
ATAGGGAGAGGTGTCTACGTTCCTCTGACGTCTAATCTCATGAATACTCT
GCCTTTATTGGGGCATTCCCTCCTCCCTTGGACATACATAGTTGGCAAAC
ATCATGAATGGCCTGGGCAAGCTGCACGTGAATCCTTCCTCCCTCTCGCC
CTCCTTCCTGACATCCTTCGCTCAAGGGGTAGAGAGAGAGGGAGGGTGGG
AGGGAAGGGCAGGTGGCTTCTCGATCCAGGAAGTGACAAATACCCTGACT
GGAGTGAGCTACATCTTTCCTGGGGCCTTTGGTTCCAAAGGAGGAGGGGG
AGGAGAGAGGGGGGGAATGAGGAAGGGAGGGAGGGAGGGAGGGAGGGGGA
CAGGGGGATGGAGCGAGGTGGACAGTATTGTACAGACACTGACGGAGCAG
GCGTTGCCGAGAGTCATCCAAGACGCCACCTCGCAGCATGTGGCCAACAT
TATGAACGCCCTTGCACGGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGG
TGGCAGGCGTCTGAAGAATCCTGATGCTCATTTTTTGGATCGTTCCACAC
ACATGCACAGGCTGGAGTACCATCCCCGCTCGCCCACCCTCATCCCCTCC
CTCCTCGTCCAGGGGCTGGCCACGGTCGAGACGGCGATGCCCCAACATAT
TGCCAACAGCTTGAACGGGTTGGCCCGGCTGGGGGGAGAGGGGAAGGGGG
AGGAGAGGGACACCTTCATACAGGCATGCATTGTACGTCATATTGCACTG
GGGTGTGTCTGTCTGTGATGTCTCCTTCCTCCCTTCCGTCTGCTCTGCAC
GTAATCTCTCTTGGCCTTCCGGATAGGGATTCTTAACTCCGCCCCTTCCC
GCGATAAGGATATTCACCTCTTCTCCTCTTTCCCTCCCTCCCTCCTTCCC
TATCTCTTCCTCTGAGTAGAATGTGACGCTCTCCACGGGCTTCTCCCGAT
TCGAGGCCAGAGACGTGTCGTCGATGCTAAACAGCATGGTTCGCATAGGG
GGCGTGGAGGAAAAATATGCCCAGGTAGGTAGGGAGGGAGGGAGGGAGGG
AGGGAGGGCGATTATGACTGTCTCTGCCTCGTTTCTGCGCTTCATCATCC
ATTCATCCTTCTTCCCTTTCTTCCTTTCCTCCCTCCCTCCCTCCCTCCCT
CCCTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCAGCTCCCAGCCTTCCT
CTCCCGAGCTCGTGCCCGTGTTCTTGTCGTTTTGGGGAGAGCGAACTCCC
AAGACATCTCCCTCATATTAAATGCACTCTCTCGGATAGGCCTCAGTCAC
GCAGGGCAAAAACAAGGTAATGAGGGAGAGAGGGAGGGAGGGAGGGGAGG
GAGAGGAGGGAGAACTGGGTTGAGAGTTGAGATCTCTCCTTGTGAATGTG
CCATCCCGTCTAGGGCGTGATGGTGGAGGGGCGGGGGCGAGGGAGGGAAG
GAGGAAGGAGGGAAACGAGGGAAGGAGGGAAGGAGGAAAGGTTCGCGACG
AGGTTGCTCACATGTCCTACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAATAACAACAACAACAACAACAACAACAACAATAA
CAACAACAACAATAACAACAACAACAACAACAACAACAACAACAACAACG
ACAACAACAACAACAATAACAGCAACAACAGCAATAACAATAACAACAAC
AACAATAACAGCAACAACAACAACAACAACAACAACAACAATAACAACAA
TAACAATAACAACAACAACAACAACAACAACAACAACAACAGCAATAACA
ATAACAACAACAACAATAACAGCAACAACAACAACAACAATAACAACAAC
AACAATAATAACAACAATAACAATAACAATAACAACAACAACAACAACAA
CAACAATAATAACAACAATAACAATAACAATAACAACAACAACAACAACA
ACAACAACAATAGCAATAACAACAACAACAACAACAACAACAACAACAAC
AACAACAGAGGAGTTTGTGCTGACGCTTTTGCACCAGCTGTTGTCGGCGC
CTCACCTCAACAACAGCCTGACACCGCAGGTGCGTGCGCTGCTGTGAGGA
AGGGAGACACGCAGAGAGCGAGGAAGGGAAGAAATGTAGGGATCGGAGAG
AAGCCAATGCGTTGGGAAGGTCACACTCACGCATATCGTCCTCCCTCCCT
CCTTCCTTCCCTCCCTTCCTCCCTCCACCAAACAGGGCGTCGCCACCATC
ATCAACGCAGCGAGCAAGCTCCTCTCCTCCCCTTCCTCCCCCGCGACCAT
CCTCAAGGCACACCACCTCTACCGGCCCTTGATGCTTCGAGCCTGCGATT
TGCTGCAGGGGATGGACAGCCAGGTGGATAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAAGGAGAACCGGAGTGTGTAAAAGTGGATGAAAGTACGCTTCG
CCACCCAGAACTAGTACTAGAGAAGTGACGAATCAAACCAAAGGTGCAGG
TTAAACAACGACCCACATGTATGACGATACATTCCCTCTCTCCACCTCCA
TCTCCTTTTGGCGCCGACAGGGCCTCTCTCTGACCATCGCCGGCCTTGGC
AAGCTCTCCCGCGGCCGCAGCGGGACCCGAGAGCCCATCCTCAGTCGATT
TCTCGCCGTCTCGTCCCCCTTCCTTGCCTCCTTCACACCCCAGCACCTTT
CGGTGTCCGTGCATGGGATTAGCCTCTTTGATCGTCCGCCGCCCACGGAG
TACATGGAGAGGGTGCAGGAGGGTGAGGGAGGGAGGGGAGGAGAGAGGGG
AAGGGGAGGAAAAGAAGAGAAGTATGAAAGTGGATGGTGCACCGATTCAA
ATGTATGCACAGATACACACATATTTACTCACACATATACACGCTACAGC
TGTCTTGCCCCACCTGAGCAGCTTCACCTTACAGCAGCTCGCCCTGACGC
TGCACGGGTACGTCGTCGTCTCCCCTTCATCCTTCCTCCCTCCCTCCCTC
CCATTCTCCATCGCCCTCAAGCTCATCCTGACTACCCCCCTCCCCAGCAT
GGCCAAGCTAGGACACCACCCAGGCGACCTCTTTCTCTCCGCTTTCCTCC
CCGCCGTCCAGCAACGCCTCGCGCCCCCCGTCCCCGGCCGAGGAGGGGGA
GGGGGAGGAGGAGCAAAACCCTCCCTCCCTCGACCCGAGCCAGGGAACAA
CCTCCCTCAGAACCTGTCCCTTGTACTAGTGGCTCTTGCAGTGCTGCAAT
ATATTCCCTCCTCCTCCTTCTGGGAGGCGTTCACGCAGGCCCTCCTCTCC
CTTACCAATTTACCTCCTCCTCCTCCTGCTGCTGCTACTGCTGCTGCAGC
TGCTGGAGGCCAGGCAGCGAATCAGCCCTCTCTCCCCCGCTCCCTCAGGC
TTATCGACGTTTCCTCCTGCCTGTGGGCTTTGGCTGCGCTGGATTTTCCT
CCCTCCCTACCGCCCACCCTCCTTTCCGCCCTCCTTGGACGGCTCGAGGC
CCTGTTGGAGGCCGGGGAGGAGGTGGAGCTGGAGGCAGCGAAACAGGTGA
GTGAAGGAATGAGGGAGGGAAGGAAGGAGGAAGGGAGGGAGGGAACCAAG
GGGGCCCGTTATCCCTGGAAGACAAGTTCTGAGGGTTTAGTCCCCCATCC
CCTTGCGTTTGTCTAAATCTCTACGCTACAACACAGCTGAAGCAATTCGC
TCTCGCCGTCGACCTCTCCCACTCCCCCTTCCCCTTCCTCCCTTCCTCCC
TTCCGACCTGGTCCTCCCTCCGCGGCCTCATCGAGACAAAGGCCTGGCTG
CCCCACGCCCAAGAAGAGTATTGCCGCAGCGACGAGGAAGGGGAAGATAG
GTATGTCGACCGCCATCCCTCCCTCCCTCCCTCCCCCCCTCTCTCCTATT
GGTCACCCACCACCATCCCTCCTCCCCTCCCTCAGAGACGGCATCATTAC
CTCACCCATCCAGCTGGAGGTGGAGCATGTCCTCCGTGAGCTTGGGTTCC
CGTGCAAGGGAGAAGTTCACTGGGGCCCCTTCTCCCTCGACCTTCTCGTC
TTCCCGCCCCCCCCTCACGAGGGAGGAGCTACCTCTTCCTCCCCCCCTTC
CTCCTCGAGCAGCAGCAAGCTTGCCCTCCCTCTCGTCCTGGAGGTGGATG
GCGCCAGCCACTTTTTCCAAAACCTGAATCCTCGGACTCCCAGAGGGCAC
ACTGTCCTCAAGAGGAGAATATTGGAGGGCCTGGTACGGAAGGAGGGAGG
GAGGGATGGAGGGAGGAAGGGAGGGAGGGATGAAGGGACCGGTGGGAGTA
GAAAGAGTCGGGAGATAGCTTGAAGAGGGGCATATCTTGATAAAGATGCA
TGTGTACGTGTCCTCCCTCTCACCCGCCCTCCCTCCCCCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCCTCCTAGGTGGGCAAGCTGTGGGGTGGGGTG
GTGGTGCTGACCACAGAAGAATGGAATGTCTGCGAAAGCGACAATCCCGC
CCTGAGCTACTCACCCTCGGATTACACGCACAATCTGCAGGTAACATTTG
GAGAGGGAGGGAGGGAGAGAGAGAGGAAGGGTGTTCGGTCCTTTACCAAC
GCATGTTTGCCTCCTCACACACCCGAATTGCAACAGCGAGACAGCGAGGA
GGAGCACGTGCGGAAGAAGATGTTGCTCAAGGAGAAAGTGAAGGAAGCTT
TCCTAGGCGGGCGGAGATAGAGTGGGTAGGAAGGGAAGGAGCAACCGAAG
GAAAGTGAAGAAAAGAATGTCTGTTTCCAAGCCATTAGAAACATCAACAG
AAGTGGCTTTCCTATGATCATGCATGACTGCCACATAAAATAAAACAAAA
ATGCATGCTATGCAGCACGTAACTTATGTAAGGTTCGGTTGAGAGATTGA
CGACTGAAGCCAAAGAAAAAGGACAAACTGCTAGTTACATGACGGCGACA
TGCGTGGCTTTTGGAGGAA

Coding sequence (CDS) from alignment at chr12:40745..46563+

>NO12G00160.3 ID=NO12G00160.3|Name=NO12G00160.3|organism=Nannochloropsis oceanica|type=CDS|length=2526bp|location=Sequence derived from alignment at chr12:40745..46563+ (Nannochloropsis oceanica)
ATGAACCTCCAGGCTGCCCCAAGATGGAGGGTTAGACAAGTCGACACCAG
TACTTTGAGAAGAAACGGTGGTAGCAGCAGCATTTCCCCTTTCCTGTGCA
GCCTCCTCCTTTTTGCCCTGGCTCCCAGCACTACGACCCACGCCTTTTTC
CATCCATGTCCAACAGTCCCTGTATCGGAAACCCATCGCCGTCTTCCCCC
CCTAATTCCTTCCAACGCTGCCGCAGCCTCCGCAGCAGGCACCCCTTCTC
CTAATTTCCTCCCTCCCCCGTCCTCTCTCACCCCAAGGGAGATCAACCAG
GCCATAATCTCTGCCGAGGGGGATGCCCTGGCGCTATTGGATGTGACGGC
GCAGCATGTAGGGGGCTTTGACAAAGTGAACTGTGCGACCATGATTAACA
GATTGTCCCGTGTAGCCGCTGCCTTGTCTCCTCCTTCCTACCGAAGCAAG
CAAGGAAAAGGTCGGGGTCGGAAGGATGAGCAGCAGTACCTCCTTTCCCT
ACTGTATGATCGTACGGCGGCCTTGCTACCGGACTGCGACGCCCGCCAGT
TGGCAAACATCATGAATGGCCTGGGCAAGCTGCACGTGAATCCTTCCTCC
CTCTCGCCCTCCTTCCTGACATCCTTCGCTCAAGGGGTAGAGAGAGAGGG
AGGGTGGGAGGGAAGGGCAGGTGGCTTCTCGATCCAGGAAGTGACAAATA
CCCTGACTGGAGTGAGCTACATCTTTCCTGGGGCCTTTGGTTCCAAAGGA
GGAGGGGGAGGAGAGAGGGGGGGAATGAGGAAGGGAGGGAGGGAGGGAGG
GAGGGGGACAGGGGGATGGAGCGAGGTGGACAGTATTGTACAGACACTGA
CGGAGCAGGCGTTGCCGAGAGTCATCCAAGACGCCACCTCGCAGCATGTG
GCCAACATTATGAACGCCCTTGCACGGCTGGAGTACCATCCCCGCTCGCC
CACCCTCATCCCCTCCCTCCTCGTCCAGGGGCTGGCCACGGTCGAGACGG
CGATGCCCCAACATATTGCCAACAGCTTGAACGGGTTGGCCCGGCTGGGG
GGAGAGGGGAAGGGGGAGGAGAGGGACACCTTCATACAGGCATGCATTAA
TGTGACGCTCTCCACGGGCTTCTCCCGATTCGAGGCCAGAGACGTGTCGT
CGATGCTAAACAGCATGGTTCGCATAGGGGGCGTGGAGGAAAAATATGCC
CAGCTCCCAGCCTTCCTCTCCCGAGCTCGTGCCCGTGTTCTTGTCGTTTT
GGGGAGAGCGAACTCCCAAGACATCTCCCTCATATTAAATGCACTCTCTC
GGATAGGCCTCAGTCACGCAGGGCAAAAACAAGAGGAGTTTGTGCTGACG
CTTTTGCACCAGCTGTTGTCGGCGCCTCACCTCAACAACAGCCTGACACC
GCAGGGCGTCGCCACCATCATCAACGCAGCGAGCAAGCTCCTCTCCTCCC
CTTCCTCCCCCGCGACCATCCTCAAGGCACACCACCTCTACCGGCCCTTG
ATGCTTCGAGCCTGCGATTTGCTGCAGGGGATGGACAGCCAGGGCCTCTC
TCTGACCATCGCCGGCCTTGGCAAGCTCTCCCGCGGCCGCAGCGGGACCC
GAGAGCCCATCCTCAGTCGATTTCTCGCCGTCTCGTCCCCCTTCCTTGCC
TCCTTCACACCCCAGCACCTTTCGGTGTCCGTGCATGGGATTAGCCTCTT
TGATCGTCCGCCGCCCACGGAGTACATGGAGAGGGTGCAGGAGGGTGAGG
GAGGGAGGGGAGGAGAGAGGGGAAGGGGAGGAAAAGAAGAGAAGTATGAA
AGTGGATGGTGCACCGATTCAAATGTATGCACAGATACACACATATTTAC
TCACACATATACACGCTACAGCTGTCTTGCCCCACCTGAGCAGCTTCACC
TTACAGCAGCTCGCCCTGACGCTGCACGGGTACGTCGTCGTCTCCCCTTC
ATCCTTCCTCCCTCCCTCCCTCCCATTCTCCATCGCCCTCAAGCTCATCC
TGACTACCCCCCTCCCCAGCATGGCCAAGCTAGGACACCACCCAGGCGAC
CTCTTTCTCTCCGCTTTCCTCCCCGCCGTCCAGCAACGCCTCGCGCCCCC
CGTCCCCGGCCGAGGAGGGGGAGGGGGAGGAGGAGCAAAACCCTCCCTCC
CTCGACCCGAGCCAGGGAACAACCTCCCTCAGAACCTGTCCCTTGTACTA
GTGGCTCTTGCAGTGCTGCAATATATTCCCTCCTCCTCCTTCTGGGAGGC
GTTCACGCAGGCCCTCCTCTCCCTTACCAATTTACCTCCTCCTCCTCCTG
CTGCTGCTACTGCTGCTGCAGCTGCTGGAGGCCAGGCAGCGAATCAGCCC
TCTCTCCCCCGCTCCCTCAGGCTTATCGACGTTTCCTCCTGCCTGTGGGC
TTTGGCTGCGCTGGATTTTCCTCCCTCCCTACCGCCCACCCTCCTTTCCG
CCCTCCTTGGACGGCTCGAGGCCCTGTTGGAGGCCGGGGAGGAGGTGGAG
CTGGAGGCAGCGAAACAGGTGAGTGA

Synonyms

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