NO11G03280.1, NO11G03280.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G03280.1
Unique Name	NO11G03280.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3543
Alignment location	chr11:1026255..1032003 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:1026255..1032003 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO11G03280.1 vs.
Match: ORX96330.1 (hypothetical protein K493DRAFT_217731 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 643.3 bits (1658), Expect = 1.300e-180
Identity = 369/936 (39.42%), Postives = 547/936 (58.44%), Query Frame = 0

Query:    7 KVEQSPADDRSYRALELENGMQVLLIHDPETDKASAAMDVGVGSLHDG-DVEGLAHFCEHMLFLGTEKFPDEQSYSKYLNQNGGHSNAYTDMDHTNYFFSVLPPFLEGALDRFAQFFIAPLFTESATAREMQAVDSENNKNIQNDAWRIHQIHCASAKADHPITRFRCGSLKTLLDDPKARGVDVRDNLLHFHDKYYSSNICKLVILGREPLDTQQEWVLRLFGAVRNLNILPPTITEIPFTAPELGQWLEVVPVMDLRLLQLFWPLPPQRSHYACCPTRYISHLLGHEGEGSILSYLKAKGWANELSAGAQFDNAEWASMDVSIDLTDEGVAHVEEVVRVIYAYLHLISKAGPQQYVFDEMQQTAANSFRFLSKQQPMSYTSALAHRMQR-YPSEHFISGPHLIREYNPALIQETLDALTPSTMLVMVVAKSYADSAQDIEPWYGTRYSKRQMTTAEIAALEGATPSSLLPSSSSLSSPSSPALSLHLPRPNEFIPSDF-TLATPAVGGGGGSDGGGAAGLLPYPLREEEGGNRRLWYKHDNIFKQPKLFYQCLLVSPVVSESPESVVCAEMLTRLVTDKLTEYSYNAALAGLHYALSSQVLQSSLTVSVQGYSHKLPLLTKTILEALSSYKGEEEDDALFARLLDRLVKDYANDLLSQPYQLAMAATTHLLVSPYETRD-KLAAAQSLTPSLLRAFIPRFLRAVRVEALVYGNATEAQALSLFDLSLVALRRPASL-PLPLLARM---GWRVVQLSAEEEVEYRTVCENTEEPNHGLQVSYQLG-PQSVALSAHLDLLVLLLKDEAFNELRTKQQLGYIVFCSASGANRH--ILSLSFLVQTVKDPAVALAAIDAFLTYSRTYLLAMPEEEFQTNVQALVDAKLEKAKNYSEQGNRYWNEVSKGSYVFDRAQREAAKVKTLTKEALVRFLDDCV 932
            K+E+S  DDRSYR ++L+NG+Q +LIHDPETD  SAA+DV VG L D  +++GLAHFCEH+LF+GT+K+P E  Y++YL+++GG SNA+T +D+TNYFF V    LEGALDRFAQFFI+PLF+ S T RE++AVDSEN KN+Q+D WRI Q+  + +   HP   F  G+L+TL D P  +G+DVRD LL FHD+YYSSNI KLV+LGRE LD   +WV+  F  + N NI  P     P T  EL + +++ PV DLR L+L +P P Q   Y   P RY+SHL+GHEG GSILS LK KGWAN LSAGA      +    +S+DLT+EG+ H +E+VR+I+ Y+ ++ + G Q+++F E++  A+ SFRF  K  P SYTS +A  MQR YP E  +SGP+LIREYNP  I+E L+ L P      ++++S+     ++E WYGT Y     +      L   T ++                 L  P+PN FIP++F T   P                +  P      G  R+W+K D+ F  PKL       +P+  ++P S V   M T L+ D LTEYSY+A +AG++Y+L ++     +++ + GY+ K+ +L  TI++ + +++ + E    F  + + + + + N  L  P+Q +M   ++++     T D KLA    LT + + AF+P+ L  + +E+L++GN T+ +A  +      A R  + L P PLL          V +S    V  R V  N    N  ++   Q+G  + V L A L+LL  + ++  F++LRTK+QLGY+VF   SG   H   + +  ++Q+ K+P      I+ FL   +  L  M ++E+Q +V +L+  KL K KN  ++ +RYW  +  G Y FD+   +   ++ + K  L+ F +  V
Sbjct:   45 KIEKSDTDDRSYRMIQLDNGLQAMLIHDPETDHGSAALDVHVGHLSDPENLQGLAHFCEHLLFMGTKKYPVENDYNQYLSEHGGDSNAFTSLDNTNYFFEVRHEHLEGALDRFAQFFISPLFSPSCTEREIKAVDSENKKNLQSDNWRIFQLEKSLSSPQHPYCHFGTGNLQTLWDGPIEQGLDVRDELLKFHDRYYSSNIMKLVVLGRESLDKLTDWVVTKFSPIENKNIEAPVFPGNPLTPRELQKQVKIRPVKDLRTLELAFPFPDQYPLYKVQPGRYLSHLIGHEGTGSILSLLKKKGWANYLSAGASHGGIGFEFFKISVDLTEEGLNHTDEIVRIIFQYIEMMKRVGVQEWIFREVENLASMSFRFKEKTPPSSYTSRVATLMQRPYPPEWVLSGPYLIREYNPQCIEECLEWLRPDNFRTFLISQSFDPKGMEVEKWYGTNYQVADFSEEFKEDLRKLTLNA----------------ELKFPKPNPFIPTNFDTNKVP------------TKEPIKRPALICNNGISRVWHKKDDTFWVPKLNMWFFFKTPLAYDTPSSCVKTRMFTELLRDSLTEYSYDAEVAGINYSLENET--EGISLEIDGYNDKIGILLDTIVQRMKAFEVKPE---RFEIVREEVRRGFKNFQLEAPHQHSMYYLSYVIQDRLWTHDEKLAELDGLTLADVEAFVPQLLSHLHIESLIHGNITQEKAKEM------AQRVESMLQPKPLLQSQLISSRESVMMSGANYVHQRDV-PNVANVNSAIEYYCQVGSTKDVVLRARLNLLAKITQEPCFDQLRTKEQLGYLVF---SGMRNHTTTMGMRIILQSEKEPIYLENRIEIFLEKLQGILENMSDQEYQKHVDSLIAKKLAKNKNLWQESHRYWAHIHSGFYEFDQIDTDVQNLRKVQKAELLEFFNQYV 937

The following BLAST results are available for this feature:

BLAST of NO11G03280.1 vs.

BLAST of NO11G03280.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
ORX96330.1	1.300e-180	39.42	hypothetical protein K493DRAFT_217731 [Basidiobolu...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO11G03280	NO11G03280	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO11G03280.1	NO11G03280.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO11G03280.1.cds1	NO11G03280.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds2	NO11G03280.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds3	NO11G03280.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds4	NO11G03280.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds5	NO11G03280.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds6	NO11G03280.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds7	NO11G03280.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds8	NO11G03280.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds9	NO11G03280.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds10	NO11G03280.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds11	NO11G03280.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03280.1.cds12	NO11G03280.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr11:1026255..1032003+
coding sequence from alignment at chr11:1026255..1032003+

mRNA sequence

>NO11G03280.1 ID=NO11G03280.1|Name=NO11G03280.1|organism=Nannochloropsis oceanica|type=mRNA|length=3543bp
CAGATCACACTTCTCAGCCACAATTGAAGAAGTCATGGCCAAGGATCTTG
GCAAAGTGGAGCAGAGCCCCGCGGACGATCGGTCCTACCGCGCCTTGGAG
CTGGAGAACGGAATGCAGGTGCTTCTGATCCATGACCCCGAGACAGACAA
GGCTAGCGCGGCAATGGACGTGGGGGTGGGTAGTCTGCACGACGGTGACG
TGGAAGGGCTGGCACATTTTTGCGAGCATATGCTGTTTTTGGGGACGGAG
AAGTTTCCCGATGAGCAGTCGTATTCCAAGTATTTGAATCAAAATGGAGG
GCACTCAAACGCCTACACAGACATGGACCACACCAACTACTTCTTCTCTG
TCCTGCCGCCTTTTCTTGAAGGTGCCCTGGACCGCTTCGCGCAATTTTTC
ATCGCCCCGCTCTTCACGGAGAGCGCCACAGCCCGTGAGATGCAGGCGGT
CGATTCGGAGAACAACAAGAACATACAGAACGACGCCTGGCGGATCCACC
AAATCCATTGCGCCAGCGCCAAGGCAGACCACCCCATTACTAGGTTCCGC
TGCGGCAGCCTCAAGACGCTCCTGGACGACCCTAAGGCCCGAGGGGTCGA
TGTCCGCGACAACCTCCTCCACTTCCACGACAAGTACTACAGCAGCAATA
TCTGCAAGCTCGTCATCTTGGGGAGGGAGCCCCTCGACACACAGCAGGAG
TGGGTGCTGCGATTGTTCGGGGCTGTTCGGAACTTGAATATTCTCCCCCC
TACCATCACGGAAATCCCCTTCACTGCCCCTGAGCTCGGGCAGTGGCTGG
AGGTCGTCCCTGTCATGGATCTACGGCTACTGCAGCTCTTCTGGCCCCTG
CCCCCCCAGCGGTCGCACTACGCGTGCTGCCCGACACGATACATTTCCCA
CCTCCTCGGCCATGAGGGGGAGGGCTCCATCTTGTCGTATCTCAAGGCCA
AGGGCTGGGCGAACGAGCTGTCGGCAGGGGCGCAGTTCGACAACGCCGAA
TGGGCCTCGATGGACGTCTCGATCGACCTGACCGATGAGGGCGTGGCGCA
CGTGGAGGAGGTGGTGAGGGTCATCTACGCATACCTGCACTTGATCTCTA
AGGCCGGGCCGCAGCAGTACGTATTTGACGAGATGCAGCAGACGGCTGCC
AACAGCTTTAGGTTTTTGTCCAAACAGCAGCCCATGTCCTACACGAGCGC
CCTGGCCCACCGGATGCAGAGGTACCCGTCGGAGCACTTCATCTCAGGGC
CGCACCTCATCCGGGAGTACAACCCCGCCCTCATTCAAGAGACCTTGGAC
GCCCTCACCCCATCCACCATGCTGGTGATGGTGGTGGCCAAATCCTACGC
CGACAGCGCCCAGGACATCGAGCCATGGTACGGCACGAGGTACAGTAAAC
GGCAGATGACGACTGCGGAGATTGCTGCTCTGGAAGGCGCCACACCGTCC
TCCCTCCTGCCCTCGTCCTCGTCCTTGTCCTCGCCTTCCTCCCCGGCCTT
GTCGCTGCACCTGCCCAGGCCCAACGAGTTTATTCCCTCCGACTTCACTT
TGGCCACTCCCGCCGTCGGTGGTGGGGGAGGAAGCGACGGAGGAGGGGCT
GCTGGGCTTCTGCCATACCCGCTGAGGGAGGAGGAGGGAGGGAACCGCCG
GCTGTGGTACAAGCATGACAACATCTTTAAGCAACCGAAACTTTTCTACC
AGTGCCTGCTAGTCTCCCCCGTAGTGTCGGAATCGCCCGAGTCGGTGGTG
TGTGCGGAAATGTTGACTCGGCTGGTGACTGATAAACTGACGGAGTACAG
CTATAACGCGGCGTTGGCTGGCCTCCACTACGCCCTTTCCTCCCAGGTCC
TCCAGTCCTCCCTAACTGTGTCTGTGCAGGGATACAGCCACAAGCTGCCC
CTCCTGACCAAAACCATCCTCGAGGCCCTGTCGAGCTATAAGGGCGAGGA
GGAGGATGACGCCCTCTTTGCCCGCCTCTTGGATCGGCTCGTGAAGGACT
ATGCCAACGACCTGCTGTCACAGCCGTATCAGCTGGCCATGGCTGCCACC
ACGCACCTCCTTGTTTCTCCTTATGAAACCCGGGACAAGCTCGCCGCAGC
CCAATCACTCACCCCCTCCCTCCTTCGCGCCTTTATCCCCCGCTTCCTCC
GCGCCGTCCGGGTGGAAGCACTCGTCTACGGCAACGCCACGGAGGCCCAA
GCGCTTTCCCTCTTCGACTTGTCCCTAGTCGCCCTCCGTCGTCCAGCCTC
TCTCCCTCTCCCTCTGCTCGCGCGGATGGGCTGGAGGGTGGTGCAGCTCT
CGGCGGAGGAGGAGGTGGAGTATCGCACCGTGTGTGAGAATACAGAGGAG
CCGAATCATGGGTTGCAGGTTTCCTACCAGCTGGGACCTCAGTCTGTGGC
CCTCTCCGCCCACCTGGACCTGCTCGTCCTCCTCCTCAAGGACGAGGCCT
TTAATGAACTGCGCACCAAGCAGCAGCTCGGATACATTGTCTTCTGCTCC
GCCTCCGGGGCAAACCGACACATTCTCTCCCTCTCCTTCCTCGTGCAGAC
CGTTAAAGACCCCGCAGTGGCCCTCGCCGCCATCGACGCCTTTCTCACGT
ACAGTCGCACGTACCTGCTGGCCATGCCGGAGGAGGAATTTCAAACCAAC
GTGCAGGCTCTGGTGGATGCCAAGCTCGAGAAGGCCAAGAACTATTCCGA
GCAAGGCAACCGATACTGGAATGAAGTCAGCAAAGGCTCCTACGTCTTTG
ACCGCGCCCAGCGGGAGGCGGCCAAGGTGAAGACCCTCACAAAGGAGGCG
TTGGTGAGATTCCTGGATGACTGCGTGGGGAGGGGCGGCGAGGGAGGGAA
GGAGGGAGGGTGGGAGGGGGGGAGAAAGATGGTGGTGGTAGTGCATGGGT
CGAGTCACCCTATTCCGTCGATGCCGGCGCAAGCGACAGCGGCAGGGGGA
GGGCTCTTGGGAGGTGCAATGGCCGCAGAGGGAGTGGGTGAGGGGAAAGG
CAATGGAGGGGACAAGACAAAGACGACGGAGGAGGAAATGAGGAAGGTAA
AGAAGCATATCTGGGTGACTGAACCGTCGGCGTTTAAGCGAGAGCGGCCG
CTGTACCCTTTGAGGCCGCAGGTGGCGGTTGAGGTGTTAGGTGTGACGGA
GCCGTGCTCAGCCATAGCGACAGAGTAGTCGAAGAAGGACGCGTGGGGAA
GGGGGGGGGAGGGAAGAAAGAACAATGGGAATAAATCTGGAGAAAGAAGA
GGAGCGTGTGAAATGTCAGATTTAAAAATGGGTCGAGTAAGATCACAAAT
GGAAAAGAATCAGGCAGATAGCGTGAGAAGCAAAGAAGGAAAGGAAGCAG
GGAACTGGCGAAAATGACAGAAGGAGGTGCACGTGGTGAGGCTGTGGGCG
TGCGTGTCGGCTGGACTTACTTTGTCTCCTCTGATTGTGTTTGGACACAG
GAGACATACGGAAGGCCAGCAGCAGACGAGCCCCGCAACAACGCGGGAGA
ATGCAATGCAGAGGGAACATCCCAAATCACGGGGTTAGGATGC

protein sequence of NO11G03280.1

>NO11G03280.1-protein ID=NO11G03280.1-protein|Name=NO11G03280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1048bp
MAKDLGKVEQSPADDRSYRALELENGMQVLLIHDPETDKASAAMDVGVGS
LHDGDVEGLAHFCEHMLFLGTEKFPDEQSYSKYLNQNGGHSNAYTDMDHT
NYFFSVLPPFLEGALDRFAQFFIAPLFTESATAREMQAVDSENNKNIQND
AWRIHQIHCASAKADHPITRFRCGSLKTLLDDPKARGVDVRDNLLHFHDK
YYSSNICKLVILGREPLDTQQEWVLRLFGAVRNLNILPPTITEIPFTAPE
LGQWLEVVPVMDLRLLQLFWPLPPQRSHYACCPTRYISHLLGHEGEGSIL
SYLKAKGWANELSAGAQFDNAEWASMDVSIDLTDEGVAHVEEVVRVIYAY
LHLISKAGPQQYVFDEMQQTAANSFRFLSKQQPMSYTSALAHRMQRYPSE
HFISGPHLIREYNPALIQETLDALTPSTMLVMVVAKSYADSAQDIEPWYG
TRYSKRQMTTAEIAALEGATPSSLLPSSSSLSSPSSPALSLHLPRPNEFI
PSDFTLATPAVGGGGGSDGGGAAGLLPYPLREEEGGNRRLWYKHDNIFKQ
PKLFYQCLLVSPVVSESPESVVCAEMLTRLVTDKLTEYSYNAALAGLHYA
LSSQVLQSSLTVSVQGYSHKLPLLTKTILEALSSYKGEEEDDALFARLLD
RLVKDYANDLLSQPYQLAMAATTHLLVSPYETRDKLAAAQSLTPSLLRAF
IPRFLRAVRVEALVYGNATEAQALSLFDLSLVALRRPASLPLPLLARMGW
RVVQLSAEEEVEYRTVCENTEEPNHGLQVSYQLGPQSVALSAHLDLLVLL
LKDEAFNELRTKQQLGYIVFCSASGANRHILSLSFLVQTVKDPAVALAAI
DAFLTYSRTYLLAMPEEEFQTNVQALVDAKLEKAKNYSEQGNRYWNEVSK
GSYVFDRAQREAAKVKTLTKEALVRFLDDCVGRGGEGGKEGGWEGGRKMV
VVVHGSSHPIPSMPAQATAAGGGLLGGAMAAEGVGEGKGNGGDKTKTTEE
EMRKVKKHIWVTEPSAFKRERPLYPLRPQVAVEVLGVTEPCSAIATE*

mRNA from alignment at chr11:1026255..1032003+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO11G03280.1 ID=NO11G03280.1|Name=NO11G03280.1|organism=Nannochloropsis oceanica|type=mRNA|length=5749bp|location=Sequence derived from alignment at chr11:1026255..1032003+ (Nannochloropsis oceanica)
CAGATCACACTTCTCAGCCACAATTGAAGAAGTCATGGCCAAGGATCTTG
GCAAAGTGGAGCAGAGCCCCGCGGACGATCGGTCCTACCGCGCCTTGGAG
CTGGAGAACGGAATGCAGGCAAGTGCGAAGGGCTTGGGTGCTGGGGATGT
ATGTAGTGCTGGTGGACACAATTGTGGTCGCGTCATGTGTTCTCGCGGTG
CTAAAAGAGCAGGCACTTTTTACAAGGACCCCCTCTAACGCAGGGGGCCT
CGTTCTGTGCTTTTGAGTCGTTCACCTGCACGCTTGTCTCAGCCCTGTTC
CATGTGATGACTCTGACGACGAGCTTGTGTGGGTGGTTGTGGATGTACGT
GTGTTCCGGGATCCGCATGCTGCCGGCATATTTTCATCGAGACCTCGTTA
ACTCATGGTATGCCCCCCTCTCTCTCCCATTCGAACTTCATGCAGGTGCT
TCTGATCCATGACCCCGAGACAGACAAGGCTAGCGCGGCAATGGACGTGG
GGGTGGGTAGTCTGCACGACGGTGACGTGGAAGGGCTGGCACATTTTTGC
GAGCATATGCTGTTTTTGGGGACGGAGAAGTTTCCCGATGAGCAGTCGTA
TTCCAAGTATTTGAATGTGAGTGAAAGAAGTAGTGGGCGTGGGTTCATTT
TCCGGTTGAGCGTATGAGGGTTTTGCCAGTCACAATTCTCCTGTTCCCCA
TATTGTTTGGCTCACAAACACAACCGAAACATAATCATATCACAGCAAAA
TGGAGGGCACTCAAACGCCTACACAGACATGGACCACACCAACTACTTCT
TCTCTGTCCTGCCGCCTTTTCTTGAAGGTACGTGTATGATGATGGAGATA
GGGAGGAGGGAGGCAGTGTCCTTGATTTCCGTATTTTTTCAATTCCGCTG
CGCTACGATTTAGCACTAGTGCTTTAAGATTAAGCACTAGTGCTTTAAGC
AATCACACGTAGAGCATGTGGCCACATTCCCCTTCCCCCCTCTCCTCCCC
TTTCTCAATCGCATCCCTCCCTTTCTATCTATGCCGCCACTCCCAGGTGC
CCTGGACCGCTTCGCGCAATTTTTCATCGCCCCGCTCTTCACGGAGAGCG
CCACAGCCCGTGAGATGCAGGCGGTCGATTCGGAGAACAACAAGAACATA
CAGAACGACGCCTGGCGGATCCACCAAATCCATTGCGCCAGCGCCAAGGC
AGACCACCCCATTACTAGGTTCCGCTGCGGCAGCCTCAAGACGCTCCTGG
GTATGTCAGAGAGGGAGGGGAGGAGAAATGGAGGAAGAGGAGGAAAATTT
TCCTTTTTCCTGTGATGACTGACATACCTACCTGTCCTCCCTCCCTCCCT
TCCTCCCTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCTCTCCCCTCAGAC
GACCCTAAGGCCCGAGGGGTCGATGTCCGCGACAACCTCCTCCACTTCCA
CGACAAGTACTACAGCAGCAATATCTGCAAGCTCGTCATCTTGGGGAGGG
AGCCCCTCGACACACAGCAGGAGTGGGTGCTGCGATTGTTCGGGGCTGTT
CGGAACTTGAATATTCTCCCCCCTACCATCACGGGTAGGCAGAGAGGAGG
GAGGGAAGGAGGGAAGGAGGGAGGGAAGAGAAGGAGGGAAGAGAAGGAGG
GAAGAGAAGGAGGGAAGAGAAGGTTGATGATTGGTATACCCATTAAATTT
GTTCTCGCCCTCCGTCTCTCCCTTCTCCCGAAATCTCACCCGCCGCCCTG
CAACTCGATCTTTGCCTTCCACGTTCAATCCCTCCCTCCCTCGCCCCCTC
CCTCCCTCAGAAATCCCCTTCACTGCCCCTGAGCTCGGGCAGTGGCTGGA
GGTCGTCCCTGTCATGGATCTACGGCTACTGCAGCTCTTCTGGCCCCTGC
CCCCCCAGCGGTCGCACTACGCGTGCTGCCCGACACGATACATTTCCCAC
CTCCTCGGCCATGAGGGGGAGGGCTCCATCTTGTCGTATCTCAAGGCCAA
GGGCTGGGCGAACGAGCTGTCGGCAGGGGCGCAGTTCGACAACGCCGAAT
GGGCCTCGATGGACGTCTCGATCGACCTGACCGATGAGGGCGTGGCGCAC
GTGGAGGAGGTGGTGAGGGTCATCTACGCATACCTGCACTTGATCTCTAA
GGCCGGGCCGCAGCAGTACGTATTTGACGAGATGCAGCAGACGGCTGCCA
ACAGCTTTAGGTTTTTGTCCAAACAGCAGCCCATGTCCTACACGAGCGCC
CTGGCCCACCGGATGCAGAGGTACCCGTCGGAGCACTTCATCTCAGGTGG
GGAAGGAGGGAGGGGGGGAAGGAGGGGAGGAGGGGCGAAAGAAGGAAGAA
ACATATGAGTAGACTAATCTCTCATTCCTTTCTTCCCTCCCTCCCTCCCT
CACTCCCTCCCTCTCCCCCTCTCTCCAGGGCCGCACCTCATCCGGGAGTA
CAACCCCGCCCTCATTCAAGAGACCTTGGACGCCCTCACCCCATCCACCA
TGCTGGTGATGGTGGTGGCCAAATCCTACGCCGACAGCGCCCAGGACATC
GAGCCATGGTACGGCACGAGGTACAGTAAACGGCAGATGACGACTGCGGA
GATTGCTGCTCTGGAAGGCGCCACACCGTCCTCCCTCCTGCCCTCGTCCT
CGTCCTTGTCCTCGCCTTCCTCCCCGGCCTTGTCGCTGCACCTGCCCAGG
CCCAACGAGTTTATTCCCTCCGACTTCACTTTGGCCACTCCCGCCGTCGG
TGGTGGGGGAGGAAGCGACGGAGGAGGGGCTGCTGGGCTTCTGCCATACC
CGCTGAGGGAGGAGGAGGGAGGGAACCGCCGGCTGTGGTACAAGCATGAC
AACATCTTTAAGCAACCGAAACTTTTCTACCAGTGCCTGCTAGTCTCCCC
CGTAGTGTCGGAATCGCCCGAGTCGGTGGTGTGTGCGGAAATGTTGACTC
GGCTGGTGACTGATAAACTGACGGAGTACAGCTATAACGCGGCGTTGGCT
GGTAGGGGGAAGGACGGGAGGGAGGGAGGGAGGGAGGGCGGGAGGGATGG
GCACAGGAAATAACAGCTGGAGGCAGGTGATGCATTTGAACCTGGACCCG
GCGTTCTCTCACTCCTTTCCCTCCCTCCCTCCCTCCCTCCTTCCCAGGCC
TCCACTACGCCCTTTCCTCCCAGGTCCTCCAGTCCTCCCTAACTGTGTCT
GTGCAGGGATACAGCCACAAGCTGCCCCTCCTGACCAAAACCATCCTCGA
GGCCCTGTCGAGCTATAAGGGCGAGGAGGAGGATGACGCCCTCTTTGCCC
GCCTCTTGGATCGGCTCGTGAAGGACTATGCCAACGACCTGCTGTCACAG
CCGTATCAGGTGGGAGGGAGGGAGGGAAAGAGGGAAAGGGGGGAAGAGGG
ATGGAGGGAAGAAGGAAAGTCTACACCGCCGTTCACTGATTCCCTCTCCC
CTTTTATCCTTTCCACCTTCGCTTGCCCTCCCTCCCTCCCTTTTTCCCTC
CCTTCCGTCCTCCCTTTTTGGCAGCTGGCCATGGCTGCCACCACGCACCT
CCTTGTTTCTCCTTATGAAACCCGGGACAAGCTCGCCGCAGCCCAATCAC
TCACCCCCTCCCTCCTTCGCGCCTTTATCCCCCGCTTCCTCCGCGCCGTC
CGGGTGGAAGCACTCGTCTACGGCAACGCCACGGAGGCCCAAGCGCTTTC
CCTCTTCGACTTGTCCCTAGTCGCCCTCCGTCGTCCAGCCTCTCTCCCTC
TCCCTCTGCTCGCGCGGATGGGCTGGAGGGTGGTGCAGCTCTCGGCGGAG
GAGGAGGTGGAGTATCGCACCGTGTGTGAGAATACAGAGGAGCCGAATCA
TGGGTTGCAGGTAGGGAGATAGAGGGACGAAGGAACGATGGGAGGGAGGG
AGGGAGGGAGGGCCGTGTAGCTGTCTTTGAAGGAGGTGGTGAAGGAACAA
CGGGTTGAGAGGCTCGCCTTCTGTTTGCACGGAAGGAGGGAGTGAAAGAG
GGACGGGAAGGAGGGAAACTGTCGATGTCTAGAAGTTTATTGGTTTTAAA
CATATGTCCTCTTCCCGCCATCCTCCCTCCGTCCCTCCCTCCCTCCTTCA
AGGTTTCCTACCAGCTGGGACCTCAGTCTGTGGCCCTCTCCGCCCACCTG
GACCTGCTCGTCCTCCTCCTCAAGGACGAGGCCTTTAATGAACTGCGCAC
CAAGCAGCAGCTCGGATACATTGGTAAGGAGGGAGCGGGCAAGGGAGGCA
GGGAAGGATGGAGGGCAGAGAGGAGAGGAGTATTATGAGACTGTTGTAGA
AATCATCTTGTGCCCCCATCACACTCACCCATCCTATTGACTGACCCCCT
CCCTTTCCCTCCCTCCTTCCCTCCCTTCTTCCCTCCTTGCTTTCCCCTCC
TTCATAGTCTTCTGCTCCGCCTCCGGGGCAAACCGACACATTCTCTCCCT
CTCCTTCCTCGTGCAGACCGTTAAAGACCCCGCAGTGGCCCTCGCCGCCA
TCGACGCCTTTCTCACGTACAGTCGCACGTACCTGCTGGCCATGCCGGAG
GAGGAATTTCAAACCAACGTGCAGGCTCTGGTGGATGCCAAGCTCGAGAA
GGCCAAGAACTATTCCGAGCAAGGCAACCGGTACGCATAAATTACATTAC
ATCTATGTCCAGATTACAGCACACCTACATCCACATTACTTTCTCCACGG
GGAGAAACCCGTACAAGGCGAAGGGCGACCTTTCGACTCTTGAAGACTTG
GGCTGCACGGGGCACAATATGATGGGAACCTCCCTATTCCGTATCTCCTC
CTCTTCTTTCTCTACCTCTTTTCCTACACCCGCCACCAGCCTCCTCTCCC
TCCCCCCTTGCGCTTTCTTTTCCTTCCTCCCTCTCACCGGTTCCCTCCTG
CCCACACGTTTCTCGCAGATACTGGAATGAAGTCAGCAAAGGCTCCTACG
TCTTTGACCGCGCCCAGCGGGAGGCGGCCAAGGTGAAGACCCTCACAAAG
GAGGCGTTGGTGAGATTCCTGGATGACTGCGTGGGGAGGGGCGGCGAGGG
AGGGAAGGAGGGAGGGTGGGAGGGGGGGAGAAAGATGGTGGTGGTAGTGC
ATGGGTCGAGTCACCCTATTCCGTCGATGCCGGCGCAAGCGACAGCGGCA
GGGGGAGGGCTCTTGGGAGGTGCAATGGCCGCAGAGGGAGTGGGTGAGGG
GAAAGGCAATGGAGGGGACAAGACAAAGACGACGGAGGAGGAAATGAGGA
AGGTAAAGAAGCATATCTGGGTGACTGAACCGTCGGCGTTTAAGCGAGAG
CGGCCGCTGTACCCTTTGAGGCCGCAGGTGGCGGTTGAGGTGTTAGGTGT
GACGGAGCCGTGCTCAGCCATAGCGACAGAGTAGTCGAAGAAGGACGCGT
GGGGAAGGGGGGGGGAGGGAAGAAAGAACAATGGGAATAAATCTGGAGAA
AGAAGAGGAGCGTGTGAAATGTCAGATTTAAAAATGGGTCGAGTAAGATC
ACAAATGGAAAAGAATCAGGCAGATAGCGTGAGAAGCAAAGAAGGAAAGG
AAGCAGGGAACTGGCGAAAATGACAGAAGGAGGTGCACGTGGTGAGGCTG
TGGGCGTGCGTGTCGGCTGGACTTACTTTGTCTCCTCTGATTGTGTTTGG
ACACAGGAGACATACGGAAGGCCAGCAGCAGACGAGCCCCGCAACAACGC
GGGAGAATGCAATGCAGAGGGAACATCCCAAATCACGGGGTTAGGATGC

Coding sequence (CDS) from alignment at chr11:1026255..1032003+

>NO11G03280.1 ID=NO11G03280.1|Name=NO11G03280.1|organism=Nannochloropsis oceanica|type=CDS|length=3144bp|location=Sequence derived from alignment at chr11:1026255..1032003+ (Nannochloropsis oceanica)
ATGGCCAAGGATCTTGGCAAAGTGGAGCAGAGCCCCGCGGACGATCGGTC
CTACCGCGCCTTGGAGCTGGAGAACGGAATGCAGGTGCTTCTGATCCATG
ACCCCGAGACAGACAAGGCTAGCGCGGCAATGGACGTGGGGGTGGGTAGT
CTGCACGACGGTGACGTGGAAGGGCTGGCACATTTTTGCGAGCATATGCT
GTTTTTGGGGACGGAGAAGTTTCCCGATGAGCAGTCGTATTCCAAGTATT
TGAATCAAAATGGAGGGCACTCAAACGCCTACACAGACATGGACCACACC
AACTACTTCTTCTCTGTCCTGCCGCCTTTTCTTGAAGGTGCCCTGGACCG
CTTCGCGCAATTTTTCATCGCCCCGCTCTTCACGGAGAGCGCCACAGCCC
GTGAGATGCAGGCGGTCGATTCGGAGAACAACAAGAACATACAGAACGAC
GCCTGGCGGATCCACCAAATCCATTGCGCCAGCGCCAAGGCAGACCACCC
CATTACTAGGTTCCGCTGCGGCAGCCTCAAGACGCTCCTGGACGACCCTA
AGGCCCGAGGGGTCGATGTCCGCGACAACCTCCTCCACTTCCACGACAAG
TACTACAGCAGCAATATCTGCAAGCTCGTCATCTTGGGGAGGGAGCCCCT
CGACACACAGCAGGAGTGGGTGCTGCGATTGTTCGGGGCTGTTCGGAACT
TGAATATTCTCCCCCCTACCATCACGGAAATCCCCTTCACTGCCCCTGAG
CTCGGGCAGTGGCTGGAGGTCGTCCCTGTCATGGATCTACGGCTACTGCA
GCTCTTCTGGCCCCTGCCCCCCCAGCGGTCGCACTACGCGTGCTGCCCGA
CACGATACATTTCCCACCTCCTCGGCCATGAGGGGGAGGGCTCCATCTTG
TCGTATCTCAAGGCCAAGGGCTGGGCGAACGAGCTGTCGGCAGGGGCGCA
GTTCGACAACGCCGAATGGGCCTCGATGGACGTCTCGATCGACCTGACCG
ATGAGGGCGTGGCGCACGTGGAGGAGGTGGTGAGGGTCATCTACGCATAC
CTGCACTTGATCTCTAAGGCCGGGCCGCAGCAGTACGTATTTGACGAGAT
GCAGCAGACGGCTGCCAACAGCTTTAGGTTTTTGTCCAAACAGCAGCCCA
TGTCCTACACGAGCGCCCTGGCCCACCGGATGCAGAGGTACCCGTCGGAG
CACTTCATCTCAGGGCCGCACCTCATCCGGGAGTACAACCCCGCCCTCAT
TCAAGAGACCTTGGACGCCCTCACCCCATCCACCATGCTGGTGATGGTGG
TGGCCAAATCCTACGCCGACAGCGCCCAGGACATCGAGCCATGGTACGGC
ACGAGGTACAGTAAACGGCAGATGACGACTGCGGAGATTGCTGCTCTGGA
AGGCGCCACACCGTCCTCCCTCCTGCCCTCGTCCTCGTCCTTGTCCTCGC
CTTCCTCCCCGGCCTTGTCGCTGCACCTGCCCAGGCCCAACGAGTTTATT
CCCTCCGACTTCACTTTGGCCACTCCCGCCGTCGGTGGTGGGGGAGGAAG
CGACGGAGGAGGGGCTGCTGGGCTTCTGCCATACCCGCTGAGGGAGGAGG
AGGGAGGGAACCGCCGGCTGTGGTACAAGCATGACAACATCTTTAAGCAA
CCGAAACTTTTCTACCAGTGCCTGCTAGTCTCCCCCGTAGTGTCGGAATC
GCCCGAGTCGGTGGTGTGTGCGGAAATGTTGACTCGGCTGGTGACTGATA
AACTGACGGAGTACAGCTATAACGCGGCGTTGGCTGGCCTCCACTACGCC
CTTTCCTCCCAGGTCCTCCAGTCCTCCCTAACTGTGTCTGTGCAGGGATA
CAGCCACAAGCTGCCCCTCCTGACCAAAACCATCCTCGAGGCCCTGTCGA
GCTATAAGGGCGAGGAGGAGGATGACGCCCTCTTTGCCCGCCTCTTGGAT
CGGCTCGTGAAGGACTATGCCAACGACCTGCTGTCACAGCCGTATCAGCT
GGCCATGGCTGCCACCACGCACCTCCTTGTTTCTCCTTATGAAACCCGGG
ACAAGCTCGCCGCAGCCCAATCACTCACCCCCTCCCTCCTTCGCGCCTTT
ATCCCCCGCTTCCTCCGCGCCGTCCGGGTGGAAGCACTCGTCTACGGCAA
CGCCACGGAGGCCCAAGCGCTTTCCCTCTTCGACTTGTCCCTAGTCGCCC
TCCGTCGTCCAGCCTCTCTCCCTCTCCCTCTGCTCGCGCGGATGGGCTGG
AGGGTGGTGCAGCTCTCGGCGGAGGAGGAGGTGGAGTATCGCACCGTGTG
TGAGAATACAGAGGAGCCGAATCATGGGTTGCAGGTTTCCTACCAGCTGG
GACCTCAGTCTGTGGCCCTCTCCGCCCACCTGGACCTGCTCGTCCTCCTC
CTCAAGGACGAGGCCTTTAATGAACTGCGCACCAAGCAGCAGCTCGGATA
CATTGTCTTCTGCTCCGCCTCCGGGGCAAACCGACACATTCTCTCCCTCT
CCTTCCTCGTGCAGACCGTTAAAGACCCCGCAGTGGCCCTCGCCGCCATC
GACGCCTTTCTCACGTACAGTCGCACGTACCTGCTGGCCATGCCGGAGGA
GGAATTTCAAACCAACGTGCAGGCTCTGGTGGATGCCAAGCTCGAGAAGG
CCAAGAACTATTCCGAGCAAGGCAACCGATACTGGAATGAAGTCAGCAAA
GGCTCCTACGTCTTTGACCGCGCCCAGCGGGAGGCGGCCAAGGTGAAGAC
CCTCACAAAGGAGGCGTTGGTGAGATTCCTGGATGACTGCGTGGGGAGGG
GCGGCGAGGGAGGGAAGGAGGGAGGGTGGGAGGGGGGGAGAAAGATGGTG
GTGGTAGTGCATGGGTCGAGTCACCCTATTCCGTCGATGCCGGCGCAAGC
GACAGCGGCAGGGGGAGGGCTCTTGGGAGGTGCAATGGCCGCAGAGGGAG
TGGGTGAGGGGAAAGGCAATGGAGGGGACAAGACAAAGACGACGGAGGAG
GAAATGAGGAAGGTAAAGAAGCATATCTGGGTGACTGAACCGTCGGCGTT
TAAGCGAGAGCGGCCGCTGTACCCTTTGAGGCCGCAGGTGGCGGTTGAGG
TGTTAGGTGTGACGGAGCCGTGCTCAGCCATAGCGACAGAGTAG

Synonyms

Publications