NO11G03140.1, NO11G03140.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G03140.1
Unique Name	NO11G03140.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3942
Alignment location	chr11:984797..989347 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:984797..989347 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO11G03140.1 vs.
Match: EWM24886.1 (Protein kinase, catalytic domain protein [Nannochloropsis gaditana])

HSP 1 Score: 746.1 bits (1925), Expect = 1.300e-211
Identity = 478/867 (55.13%), Postives = 570/867 (65.74%), Query Frame = 0

Query:    3 CVERALLTGRDEHAA--PGGAPGLRRHEALEVDEAA--------SSHC-SSSLSDSSTLYNSSGSSSFDEVSTRRVCACLSPGRRGRKYHPKQDTGGVFYFLGGGVGGCNGDKDHEFHPLKNK--QKQQQGREEESIQAEKDEGT--CRSHFKEESALLLLSKLDITEQQKEKQQQHQQQQFQDRSIPFTDAELLHLQKEQEQQRQQEQQQNQQQQQHTDTKETSQTRTTKDDDKLPGPPSSSASASASSSTDLLTPPPTNTVCARVASMGFILNALSYLWNGSDYSSSSTSTSSNSRSGQYGHGDGNCSHSGSRNRDLSTSSYSMRGGSMDGHPLGAPRGGSCDDWIVEEEGEGVDATHPGCDRCQRRSCGFSEAAAERYVTEALKIEELSFLSVLGKGSFGTVVLCRRPSSSSSSSSSSSSSSSSSSSSYPSVPPSSPSLKRRNSSSSSSSSSVVDSSLYAMKVLRKSHLVAKHQIDRTRVEKAIMDRVSHPFIMHMHAAFQSENFLFMMLEYCRGGELLFHLARRRRFSESATRFYAAELVLALEYLHRHDIVFRDLKPENILLDAEGHLRLGDFGLAKCGVRQPETGALSMCGTPEYMAPEVLAQQQYGQSVDWWSLGMLTYEMMTGYPPWYTRDRKKLVRRVKFAPLTIPSSFSPSLASFIESLLVRHPLKRLGGKGGTGQVKRHAFFKFISWEAVLSKKVIPPIRPCEDGGR-------NDER-SSSVGSGSSAQAGGGLTCKSPVCRLQGHQKDLDPSSPRRLNFLSNSYSSSPNGVATAAGKGGGGRHPLNKEEGEEEEEEEEVCPHEYIGTENFEKEFTGLDVASAFEVLEPLSPHSNAIFSNFSTEPTIRVLKWKGR 847
            C E+++L   DE A   P  AP    ++ L V+  +        S H  SSS SD+S    SS  +S DE  ++ +C+CLS  R+G     K+          G      G    +  P   +  ++ +   E E+ + +  +G   C    +++ A LL  K   T QQ     QH  Q+     IP TD      + +QEQ  +Q   Q+Q   +  + +  S           P   SS  S ++S       P  T+++C ++ASMGFILNAL+YLW G   +S ST+   +  S            S SR   LS+S+YSMRGGS+DG+  G P G    +W+V EE E VDA HPGCDRCQRRSCGFS+  ++ Y  E L IEELSFLSVLGKGSFGTVVLCRRP S SSSSSSS          +PS PP       R +   SS+    D+ LYAMKVLRKSHLVAKHQIDRTRVEK IMDRVSHPFIMHM++AFQSENFLFMMLEYCRGGELLFHLARRRRF E+A RFYAAELVLALEYLHRHDIVFRDLKPENILLDA GH+RLGDFGLAK GVR+P+ GALSMCGTPEYMAPEVL QQ YG+SVDWWSLGMLTYEMMTGYPPWYTRDRKKLVRRVKFAPL IP SFSPSLASF+E+LL+RHPL+RLGGKGGTG+VKRH FF+ ISWEAVL+KKVIPPIRP E+G R        D R S S G+  +   GG +TC+SPVC+L+G  + LDP+SPRR++FL++S ++S    AT AG+    R            +    CPHE+IGTENFEKEFTGLDVASAFEVLEPLSPHSNAIF NFSTEPTIR L+ K R
Sbjct:    8 CTEKSVLILCDEQARRQPSEAPDSSGNKRLTVNNGSVANKTVRHSDHRDSSSSSDASITSPSSSHTSIDEAPSKDLCSCLSH-RKGLLSCVKR----------GARSEAEGQHRRQSPPPSRRLLKEDKPNLEIEATRPDAKDGAQDCEDLGEDDCAQLLPRKDIFTWQQ-----QHDPQRTPP-CIPTTDT-----RDQQEQPPRQPPSQSQGSLKKRENRNNS-----------PLACSSLPSHTSSLPDPANFPLSTSSICTQIASMGFILNALTYLWTGEYTTSGSTTDPCDDHS-----------RSSSRGGSLSSSTYSMRGGSVDGYSYGPPPGKG--NWVVPEEDEQVDAAHPGCDRCQRRSCGFSKTVSDIYAVEPLAIEELSFLSVLGKGSFGTVVLCRRPLSISSSSSSS----------FPSSPP-------RLAGLGSSTLDREDAPLYAMKVLRKSHLVAKHQIDRTRVEKEIMDRVSHPFIMHMYSAFQSENFLFMMLEYCRGGELLFHLARRRRFCEAAARFYAAELVLALEYLHRHDIVFRDLKPENILLDAHGHVRLGDFGLAKRGVREPDRGALSMCGTPEYMAPEVLTQQAYGRSVDWWSLGMLTYEMMTGYPPWYTRDRKKLVRRVKFAPLMIPPSFSPSLASFVEALLIRHPLRRLGGKGGTGEVKRHGFFQHISWEAVLNKKVIPPIRPFEEGRRAGGRWSTQDSRGSESSGNSGTRGEGGMVTCQSPVCKLEG-SRHLDPTSPRRVSFLTSSLNAS----ATDAGRTSATR------------KAAAACPHEFIGTENFEKEFTGLDVASAFEVLEPLSPHSNAIFVNFSTEPTIRCLRPKER 794

The following BLAST results are available for this feature:

BLAST of NO11G03140.1 vs.

BLAST of NO11G03140.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24886.1	1.300e-211	55.13	Protein kinase, catalytic domain protein [Nannochl...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO11G03140	NO11G03140	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO11G03140.1	NO11G03140.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO11G03140.1.cds1	NO11G03140.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03140.1.cds2	NO11G03140.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03140.1.cds3	NO11G03140.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr11:984797..989347-
coding sequence from alignment at chr11:984797..989347-

mRNA sequence

>NO11G03140.1 ID=NO11G03140.1|Name=NO11G03140.1|organism=Nannochloropsis oceanica|type=mRNA|length=3942bp
TTCTTCCATCGTTTGCTCGTCTGTGATGGCGGATGTGGTGGTGATGGGGT
GTGATAAAAGTGAGATAAAGAGAGCTCGGCGAAGACGGCGACGGAAAGCA
AGGGCCTCAAAGTCTGTGAATTTGTGTGTGGTGAGGGGGGCGCTTGAGTA
AGAGAGAATATGACTCTAAGTCTTCTAACCACCCTCTAGGGCCCTACACT
CAATACTTCAGGCATATACGCCGTGCTCCTCGTGGACGGCATCGTTCGCG
CCTTGGTTTAATGTAGTCATGTTATTCAACTTTTCTTCGGCGATCCTCCA
ACCCCTTTGCTTCCGTTGAGTACGTCCCAAACGCCCTGCCTCATATCGTC
CCCCAGTTCATGCCTTTCCATTCCGAAGCGAAGCCAAAGGCCACCCACGG
CAAACACACACTCTCATTCATCTTTCATCTCTGATTTCATGGGGACAGCT
GCAGGCACTGCCCCAGTTTTCCTTTGTCCTTCAACCCACCAAAGATCGGA
ACAGGGGAATCGTCGTGCTCGCCACTAAGAGTTGCACTGCCTTACGCCAC
ACAGCAACACGCAAAACGTTGTCTAGACGAGCTCCCTGCTTCGTGTCGCG
TTCTTTTGCGCATTTTTGGTACCAATCGCCGGCTGGTACTTAAATTTTGT
ACTGACAATATGGCTTGCGTCGAGCGCGCCCTTTTGACCGGCCGCGATGA
GCATGCTGCACCAGGAGGAGCGCCTGGTCTTCGAAGGCACGAGGCCTTAG
AGGTGGATGAAGCAGCGTCGTCCCACTGCTCGTCCTCCTTGAGTGACTCC
TCCACGTTATACAATAGCTCCGGCTCCAGTTCTTTTGATGAGGTATCGAC
TAGACGGGTCTGTGCTTGTCTGTCTCCCGGACGTCGTGGTCGCAAGTACC
ACCCTAAACAGGACACAGGTGGCGTGTTTTATTTCTTGGGAGGGGGCGTC
GGTGGGTGCAACGGTGATAAGGACCACGAGTTCCACCCCCTGAAAAACAA
GCAGAAGCAGCAGCAAGGGAGGGAGGAGGAATCCATTCAGGCGGAGAAGG
ACGAGGGCACGTGCCGCAGCCATTTCAAAGAGGAGAGTGCCTTGCTCCTG
CTATCCAAGCTCGACATCACAGAGCAGCAGAAAGAGAAACAACAGCAGCA
TCAGCAGCAGCAGTTTCAAGATAGGAGCATCCCCTTTACAGACGCAGAGC
TGCTGCACCTTCAGAAAGAGCAAGAACAACAGCGGCAACAAGAACAGCAA
CAGAATCAGCAGCAGCAGCAGCACACCGATACTAAGGAAACCTCACAAAC
AAGGACCACAAAGGACGACGACAAGCTCCCTGGCCCTCCCTCCTCCTCCG
CCTCCGCCTCCGCCTCGTCTTCAACCGACTTGCTCACCCCCCCTCCCACC
AACACGGTCTGTGCGCGAGTCGCTTCCATGGGCTTCATTCTAAACGCCCT
GTCCTACCTTTGGAACGGGAGCGACTACAGCAGCAGCAGCACCAGCACCA
GCAGCAACAGCCGCAGCGGGCAGTATGGCCATGGCGACGGCAACTGCAGT
CACAGCGGGAGCAGGAACAGGGACCTTTCCACCTCCTCCTACTCCATGCG
AGGTGGTTCCATGGACGGGCACCCCCTGGGGGCTCCCCGCGGCGGCAGTT
GCGATGACTGGATCGTGGAGGAGGAGGGTGAAGGCGTGGATGCCACTCAC
CCTGGCTGTGACCGCTGCCAGCGTCGCTCGTGCGGGTTTTCAGAGGCAGC
CGCAGAGCGCTATGTCACAGAGGCCCTGAAAATAGAGGAATTAAGTTTTT
TGAGTGTCTTGGGGAAGGGATCTTTTGGCACGGTTGTTCTATGCCGTCGT
CCCTCCTCCTCCTCATCCTCCTCCTCCTCCTCCTCCTCCTCATCCTCCTC
CTCCTCCTCCTCCTATCCTTCAGTTCCTCCTTCCTCTCCTTCGCTAAAAA
GGCGCAACAGCAGTAGCAGTAGCAGCAGCAGCAGTGTTGTCGACTCGTCT
TTGTATGCTATGAAGGTCCTACGCAAGTCCCACCTGGTGGCAAAGCACCA
AATCGATCGCACCCGGGTGGAAAAAGCCATCATGGACAGAGTCTCTCACC
CCTTTATCATGCACATGCACGCGGCCTTCCAATCGGAGAATTTTTTGTTT
ATGATGTTGGAGTACTGTAGGGGGGGCGAGCTCTTGTTCCACTTGGCCCG
CCGGCGCCGTTTCTCGGAGAGCGCGACTCGATTTTATGCCGCGGAGTTGG
TGCTGGCGTTGGAATACCTGCACCGCCACGACATTGTTTTTCGGGATTTA
AAACCCGAGAACATTTTATTGGACGCAGAAGGTCATTTGCGACTGGGGGA
TTTTGGGCTGGCCAAATGCGGTGTAAGACAGCCGGAAACAGGGGCGTTGT
CCATGTGCGGCACGCCCGAATACATGGCTCCCGAGGTGTTGGCGCAGCAG
CAGTATGGCCAGAGTGTTGATTGGTGGAGCTTGGGCATGCTGACGTACGA
GATGATGACAGGGTACCCCCCTTGGTACACCCGCGACCGCAAAAAGCTCG
TCCGTCGTGTGAAGTTTGCCCCGCTCACCATCCCTTCCTCCTTCTCACCT
TCTCTCGCCTCCTTCATCGAATCCTTGCTCGTCCGGCACCCTCTGAAACG
CCTGGGAGGAAAGGGAGGGACAGGCCAGGTGAAGAGGCATGCGTTCTTTA
AGTTTATCTCATGGGAGGCAGTATTAAGCAAAAAGGTTATCCCCCCTATT
AGGCCCTGTGAGGACGGGGGGAGGAACGACGAGAGGTCCAGCAGCGTGGG
CAGTGGCAGCAGTGCTCAGGCTGGGGGGGGGTTGACATGCAAGTCCCCTG
TGTGCCGGCTCCAGGGCCATCAGAAGGATCTTGATCCTTCTTCCCCTCGG
AGGCTTAATTTCCTCTCGAATTCATACTCCTCTTCTCCCAATGGGGTCGC
CACCGCCGCAGGCAAGGGAGGGGGAGGGCGTCATCCTCTCAACAAGGAGG
AGGGGGAAGAGGAGGAGGAGGAGGAGGAAGTGTGCCCTCATGAATACATC
GGGACGGAGAACTTCGAAAAGGAATTCACCGGCTTGGACGTGGCGAGTGC
ATTTGAAGTGCTGGAGCCGCTGTCGCCTCACTCGAATGCCATTTTTTCGA
ATTTCAGCACCGAGCCCACGATCCGGGTATTGAAGTGGAAGGGAAGGAGG
GTGGGAAGGGGGAATGGCCCGCTTGTGAAGAAAGCGAGCGAGAAGGAGGT
TGGTTTGCTCGGGGGAACAGGGAGCGTGGCTGTGGTATCTGTGAATGATG
AGGAAGGAGGGAGGGGCGGAGGACGGTGGGAAGAGATAAGGGGGCCAAGT
GGCGCGTAGGTGAAGAGAAGGAAAAGAGGAAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAAGGAGGGAAGGAGTGTGTAGAATGCGATTGATTTTCT
AGATCGAGACCGAGAAAACGCTTCGCCTCTATTGAAATAGGGAGCGCCGA
GAGAGGTGGAGGAGAAGGGAGAGAAGAGAGGGATATGGCGGTTATGGCGG
TGCTGGCCAGGAGGTAGCGTGGCTTTAAAACAACGGAGGGCGATAACTCC
AACTGATGAAAAGCAGCCGAGTAGTAGGAGTAGGAGTAGCTGCAACAGCA
GCAGCACCAATAGCAGCAGCACCAGTAGCAACAAGAAGAAGAAGAGCGAC
TGGAATTCGGCAGTAAGTAGTAGGATGGTCCGTGTGCCATTGCACAGGAG
AAGAGGACTTCCTGTCTTCGTAATGTGCGACTCCTTGCTCTGATTGAAGA
AGATGAGCGTTGGAAGAAGTTTACGTTCTGATTATTGATTAAAATTGCGC
GAAACGGTGCGACGCGAAGGAAGAAAGGGAGACAACGAAAGCAAGCACCC
AGGGGATCATTTGTGGCAGGTGCACGCACGGCGATATTTTAC

protein sequence of NO11G03140.1

>NO11G03140.1-protein ID=NO11G03140.1-protein|Name=NO11G03140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=900bp
MACVERALLTGRDEHAAPGGAPGLRRHEALEVDEAASSHCSSSLSDSSTL
YNSSGSSSFDEVSTRRVCACLSPGRRGRKYHPKQDTGGVFYFLGGGVGGC
NGDKDHEFHPLKNKQKQQQGREEESIQAEKDEGTCRSHFKEESALLLLSK
LDITEQQKEKQQQHQQQQFQDRSIPFTDAELLHLQKEQEQQRQQEQQQNQ
QQQQHTDTKETSQTRTTKDDDKLPGPPSSSASASASSSTDLLTPPPTNTV
CARVASMGFILNALSYLWNGSDYSSSSTSTSSNSRSGQYGHGDGNCSHSG
SRNRDLSTSSYSMRGGSMDGHPLGAPRGGSCDDWIVEEEGEGVDATHPGC
DRCQRRSCGFSEAAAERYVTEALKIEELSFLSVLGKGSFGTVVLCRRPSS
SSSSSSSSSSSSSSSSSSYPSVPPSSPSLKRRNSSSSSSSSSVVDSSLYA
MKVLRKSHLVAKHQIDRTRVEKAIMDRVSHPFIMHMHAAFQSENFLFMML
EYCRGGELLFHLARRRRFSESATRFYAAELVLALEYLHRHDIVFRDLKPE
NILLDAEGHLRLGDFGLAKCGVRQPETGALSMCGTPEYMAPEVLAQQQYG
QSVDWWSLGMLTYEMMTGYPPWYTRDRKKLVRRVKFAPLTIPSSFSPSLA
SFIESLLVRHPLKRLGGKGGTGQVKRHAFFKFISWEAVLSKKVIPPIRPC
EDGGRNDERSSSVGSGSSAQAGGGLTCKSPVCRLQGHQKDLDPSSPRRLN
FLSNSYSSSPNGVATAAGKGGGGRHPLNKEEGEEEEEEEEVCPHEYIGTE
NFEKEFTGLDVASAFEVLEPLSPHSNAIFSNFSTEPTIRVLKWKGRRVGR
GNGPLVKKASEKEVGLLGGTGSVAVVSVNDEEGGRGGGRWEEIRGPSGA*

mRNA from alignment at chr11:984797..989347-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO11G03140.1 ID=NO11G03140.1|Name=NO11G03140.1|organism=Nannochloropsis oceanica|type=mRNA|length=4551bp|location=Sequence derived from alignment at chr11:984797..989347- (Nannochloropsis oceanica)
TTCTTCCATCGTTTGCTCGTCTGTGATGGCGGATGTGGTGGTGATGGGGT
GTGATAAAAGTGAGATAAAGAGAGCTCGGCGAAGACGGCGACGGAAAGCA
AGGGCCTCAAAGTCTGTGAATTTGTGTGTGGTGAGGGGGGCGCTTGAGTA
AGAGAGAATATGACTCTAAGTCTTCTAACCACCCTCTAGGGCCCTACACT
CAATACTTCAGGCATATACGCCGTGCTCCTCGTGGACGGCATCGTTCGCG
CCTTGGTTTAATGTAGTCATGTTATTCAACTTTTCTTCGGCGATCCTCCA
ACCCCTTTGCTTCCGTTGAGTACGTCCCAAACGCCCTGCCTCATATCGTC
CCCCAGTTCATGCCTTTCCATTCCGAAGCGAAGCCAAAGGCCACCCACGG
CAAACACACACTCTCATTCATCTTTCATCTCTGATTTCATGGGGACAGCT
GCAGGCACTGCCCCAGTTTTCCTTTGTCCTTCAACCCACCAAAGATCGGA
ACAGGGGAATCGTCGTGCTCGCCACTAAGAGTTGCACTGCCTTACGCCAC
ACAGGTACGAAGAATAATCATCGCTGTCTCATCTCAATGTCCCAAGAGGA
ACCGTTCTCCTCTCTCGTGTCGCCTCGTGTTTGGCTAATTGCCTCCCCCT
TTCTCCGGGCTTCCCTTTTTTCCTTCCTCCCACACGTCAAGCAACACGCA
AAACGTTGTCTAGACGAGCTCCCTGCTTCGTGTCGCGTTCTTTTGCGCAT
TTTTGGTACCAATCGCCGGCTGGTACTTAAATTTTGTACTGACAATATGG
CTTGCGTCGAGCGCGCCCTTTTGACCGGCCGCGATGAGCATGCTGCACCA
GGAGGAGCGCCTGGTCTTCGAAGGCACGAGGCCTTAGAGGTGGATGAAGC
AGCGTCGTCCCACTGCTCGTCCTCCTTGAGTGACTCCTCCACGTTATACA
ATAGCTCCGGCTCCAGTTCTTTTGATGAGGTAGCTAGCTTTGTGAAACAT
ACGGAGACGAGACCAGAGATCCATGTCAATTACTTTTACCTTTCTACCCA
CCGCAAGCATAATCCACACTCACATCTTACGCGCGCTTACGCCCTGCAGC
AGGAGAGCATAGATCCCGTAATTGGGCACCTGTCAAACCTACTCCACGTC
GTTCCTCACACTCCCACCCTCCCCTTTCCTCCCCCCCCTTTCCATCAGGT
ATCGACTAGACGGGTCTGTGCTTGTCTGTCTCCCGGACGTCGTGGTCGCA
AGTACCACCCTAAACAGGACACAGGTGGCGTGTTTTATTTCTTGGGAGGG
GGCGTCGGTGGGTGCAACGGTGATAAGGACCACGAGTTCCACCCCCTGAA
AAACAAGCAGAAGCAGCAGCAAGGGAGGGAGGAGGAATCCATTCAGGCGG
AGAAGGACGAGGGCACGTGCCGCAGCCATTTCAAAGAGGAGAGTGCCTTG
CTCCTGCTATCCAAGCTCGACATCACAGAGCAGCAGAAAGAGAAACAACA
GCAGCATCAGCAGCAGCAGTTTCAAGATAGGAGCATCCCCTTTACAGACG
CAGAGCTGCTGCACCTTCAGAAAGAGCAAGAACAACAGCGGCAACAAGAA
CAGCAACAGAATCAGCAGCAGCAGCAGCACACCGATACTAAGGAAACCTC
ACAAACAAGGACCACAAAGGACGACGACAAGCTCCCTGGCCCTCCCTCCT
CCTCCGCCTCCGCCTCCGCCTCGTCTTCAACCGACTTGCTCACCCCCCCT
CCCACCAACACGGTCTGTGCGCGAGTCGCTTCCATGGGCTTCATTCTAAA
CGCCCTGTCCTACCTTTGGAACGGGAGCGACTACAGCAGCAGCAGCACCA
GCACCAGCAGCAACAGCCGCAGCGGGCAGTATGGCCATGGCGACGGCAAC
TGCAGTCACAGCGGGAGCAGGAACAGGGACCTTTCCACCTCCTCCTACTC
CATGCGAGGTGGTTCCATGGACGGGCACCCCCTGGGGGCTCCCCGCGGCG
GCAGTTGCGATGACTGGATCGTGGAGGAGGAGGGTGAAGGCGTGGATGCC
ACTCACCCTGGCTGTGACCGCTGCCAGCGTCGCTCGTGCGGGTTTTCAGA
GGCAGCCGCAGAGCGCTATGTCACAGAGGCCCTGAAAATAGAGGAATTAA
GTTTTTTGAGTGTCTTGGGGAAGGGATCTTTTGGCACGGTTGTTCTATGC
CGTCGTCCCTCCTCCTCCTCATCCTCCTCCTCCTCCTCCTCCTCCTCATC
CTCCTCCTCCTCCTCCTCCTATCCTTCAGTTCCTCCTTCCTCTCCTTCGC
TAAAAAGGCGCAACAGCAGTAGCAGTAGCAGCAGCAGCAGTGTTGTCGAC
TCGTCTTTGTATGCTATGAAGGTCCTACGCAAGTCCCACCTGGTGGCAAA
GCACCAAATCGATCGCACCCGGGTGGAAAAAGCCATCATGGACAGAGTCT
CTCACCCCTTTATCATGCACATGCACGCGGCCTTCCAATCGGAGAATTTT
TTGTTTATGATGTTGGAGTACTGTAGGGGGGGCGAGCTCTTGTTCCACTT
GGCCCGCCGGCGCCGTTTCTCGGAGAGCGCGACTCGATTTTATGCCGCGG
AGTTGGTGCTGGCGTTGGAATACCTGCACCGCCACGACATTGTTTTTCGG
GATTTAAAACCCGAGAACATTTTATTGGACGCAGAAGGTCATTTGCGACT
GGGGGATTTTGGGCTGGCCAAATGCGGTGTAAGACAGCCGGAAACAGGGG
CGTTGTCCATGTGCGGCACGCCCGAATACATGGCTCCCGAGGTGTTGGCG
CAGCAGCAGTATGGCCAGAGTGTTGATTGGTGGAGCTTGGGCATGCTGAC
GTACGAGATGATGACAGGGTACCCCCCTTGGTAAGTCCGTGGGCCCTCCC
TCCCTCCGTCCGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCTTGCT
AGGGCAGTGTGCGTAATGGTGGAGGAGACTCTCAGCCCCGTCTCCCATAC
TGGTTAAGACGCAAGCCATGACTTGACTCTTCCTCTCTTTTGTCTTTCAT
TGTCTCCTTCCCCTTTCTCCCTTCCACAAAATTCGTACTCAACCTTCCTC
CCTCCCTCCCTCCTCCCTCTCTCGCTCGCTCAGGTACACCCGCGACCGCA
AAAAGCTCGTCCGTCGTGTGAAGTTTGCCCCGCTCACCATCCCTTCCTCC
TTCTCACCTTCTCTCGCCTCCTTCATCGAATCCTTGCTCGTCCGGCACCC
TCTGAAACGCCTGGGAGGAAAGGGAGGGACAGGCCAGGTGAAGAGGCATG
CGTTCTTTAAGTTTATCTCATGGGAGGCAGTATTAAGCAAAAAGGTTATC
CCCCCTATTAGGCCCTGTGAGGACGGGGGGAGGAACGACGAGAGGTCCAG
CAGCGTGGGCAGTGGCAGCAGTGCTCAGGCTGGGGGGGGGTTGACATGCA
AGTCCCCTGTGTGCCGGCTCCAGGGCCATCAGAAGGATCTTGATCCTTCT
TCCCCTCGGAGGCTTAATTTCCTCTCGAATTCATACTCCTCTTCTCCCAA
TGGGGTCGCCACCGCCGCAGGCAAGGGAGGGGGAGGGCGTCATCCTCTCA
ACAAGGAGGAGGGGGAAGAGGAGGAGGAGGAGGAGGAAGTGTGCCCTCAT
GAATACATCGGGACGGAGAACTTCGAAAAGGAATTCACCGGCTTGGACGT
GGCGAGTGCATTTGAAGTGCTGGAGCCGCTGTCGCCTCACTCGAATGCCA
TTTTTTCGAATTTCAGCACCGAGCCCACGATCCGGGTATTGAAGTGGAAG
GGAAGGAGGGTGGGAAGGGGGAATGGCCCGCTTGTGAAGAAAGCGAGCGA
GAAGGAGGTTGGTTTGCTCGGGGGAACAGGGAGCGTGGCTGTGGTATCTG
TGAATGATGAGGAAGGAGGGAGGGGCGGAGGACGGTGGGAAGAGATAAGG
GGGCCAAGTGGCGCGTAGGTGAAGAGAAGGAAAAGAGGAAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAAGGAGGGAAGGAGTGTGTAGAATGCGAT
TGATTTTCTAGATCGAGACCGAGAAAACGCTTCGCCTCTATTGAAATAGG
GAGCGCCGAGAGAGGTGGAGGAGAAGGGAGAGAAGAGAGGGATATGGCGG
TTATGGCGGTGCTGGCCAGGAGGTAGCGTGGCTTTAAAACAACGGAGGGC
GATAACTCCAACTGATGAAAAGCAGCCGAGTAGTAGGAGTAGGAGTAGCT
GCAACAGCAGCAGCACCAATAGCAGCAGCACCAGTAGCAACAAGAAGAAG
AAGAGCGACTGGAATTCGGCAGTAAGTAGTAGGATGGTCCGTGTGCCATT
GCACAGGAGAAGAGGACTTCCTGTCTTCGTAATGTGCGACTCCTTGCTCT
GATTGAAGAAGATGAGCGTTGGAAGAAGTTTACGTTCTGATTATTGATTA
AAATTGCGCGAAACGGTGCGACGCGAAGGAAGAAAGGGAGACAACGAAAG
CAAGCACCCAGGGGATCATTTGTGGCAGGTGCACGCACGGCGATATTTTA
C

Coding sequence (CDS) from alignment at chr11:984797..989347-

>NO11G03140.1 ID=NO11G03140.1|Name=NO11G03140.1|organism=Nannochloropsis oceanica|type=CDS|length=2700bp|location=Sequence derived from alignment at chr11:984797..989347- (Nannochloropsis oceanica)
ATGGCTTGCGTCGAGCGCGCCCTTTTGACCGGCCGCGATGAGCATGCTGC
ACCAGGAGGAGCGCCTGGTCTTCGAAGGCACGAGGCCTTAGAGGTGGATG
AAGCAGCGTCGTCCCACTGCTCGTCCTCCTTGAGTGACTCCTCCACGTTA
TACAATAGCTCCGGCTCCAGTTCTTTTGATGAGGTATCGACTAGACGGGT
CTGTGCTTGTCTGTCTCCCGGACGTCGTGGTCGCAAGTACCACCCTAAAC
AGGACACAGGTGGCGTGTTTTATTTCTTGGGAGGGGGCGTCGGTGGGTGC
AACGGTGATAAGGACCACGAGTTCCACCCCCTGAAAAACAAGCAGAAGCA
GCAGCAAGGGAGGGAGGAGGAATCCATTCAGGCGGAGAAGGACGAGGGCA
CGTGCCGCAGCCATTTCAAAGAGGAGAGTGCCTTGCTCCTGCTATCCAAG
CTCGACATCACAGAGCAGCAGAAAGAGAAACAACAGCAGCATCAGCAGCA
GCAGTTTCAAGATAGGAGCATCCCCTTTACAGACGCAGAGCTGCTGCACC
TTCAGAAAGAGCAAGAACAACAGCGGCAACAAGAACAGCAACAGAATCAG
CAGCAGCAGCAGCACACCGATACTAAGGAAACCTCACAAACAAGGACCAC
AAAGGACGACGACAAGCTCCCTGGCCCTCCCTCCTCCTCCGCCTCCGCCT
CCGCCTCGTCTTCAACCGACTTGCTCACCCCCCCTCCCACCAACACGGTC
TGTGCGCGAGTCGCTTCCATGGGCTTCATTCTAAACGCCCTGTCCTACCT
TTGGAACGGGAGCGACTACAGCAGCAGCAGCACCAGCACCAGCAGCAACA
GCCGCAGCGGGCAGTATGGCCATGGCGACGGCAACTGCAGTCACAGCGGG
AGCAGGAACAGGGACCTTTCCACCTCCTCCTACTCCATGCGAGGTGGTTC
CATGGACGGGCACCCCCTGGGGGCTCCCCGCGGCGGCAGTTGCGATGACT
GGATCGTGGAGGAGGAGGGTGAAGGCGTGGATGCCACTCACCCTGGCTGT
GACCGCTGCCAGCGTCGCTCGTGCGGGTTTTCAGAGGCAGCCGCAGAGCG
CTATGTCACAGAGGCCCTGAAAATAGAGGAATTAAGTTTTTTGAGTGTCT
TGGGGAAGGGATCTTTTGGCACGGTTGTTCTATGCCGTCGTCCCTCCTCC
TCCTCATCCTCCTCCTCCTCCTCCTCCTCCTCATCCTCCTCCTCCTCCTC
CTCCTATCCTTCAGTTCCTCCTTCCTCTCCTTCGCTAAAAAGGCGCAACA
GCAGTAGCAGTAGCAGCAGCAGCAGTGTTGTCGACTCGTCTTTGTATGCT
ATGAAGGTCCTACGCAAGTCCCACCTGGTGGCAAAGCACCAAATCGATCG
CACCCGGGTGGAAAAAGCCATCATGGACAGAGTCTCTCACCCCTTTATCA
TGCACATGCACGCGGCCTTCCAATCGGAGAATTTTTTGTTTATGATGTTG
GAGTACTGTAGGGGGGGCGAGCTCTTGTTCCACTTGGCCCGCCGGCGCCG
TTTCTCGGAGAGCGCGACTCGATTTTATGCCGCGGAGTTGGTGCTGGCGT
TGGAATACCTGCACCGCCACGACATTGTTTTTCGGGATTTAAAACCCGAG
AACATTTTATTGGACGCAGAAGGTCATTTGCGACTGGGGGATTTTGGGCT
GGCCAAATGCGGTGTAAGACAGCCGGAAACAGGGGCGTTGTCCATGTGCG
GCACGCCCGAATACATGGCTCCCGAGGTGTTGGCGCAGCAGCAGTATGGC
CAGAGTGTTGATTGGTGGAGCTTGGGCATGCTGACGTACGAGATGATGAC
AGGGTACCCCCCTTGGTACACCCGCGACCGCAAAAAGCTCGTCCGTCGTG
TGAAGTTTGCCCCGCTCACCATCCCTTCCTCCTTCTCACCTTCTCTCGCC
TCCTTCATCGAATCCTTGCTCGTCCGGCACCCTCTGAAACGCCTGGGAGG
AAAGGGAGGGACAGGCCAGGTGAAGAGGCATGCGTTCTTTAAGTTTATCT
CATGGGAGGCAGTATTAAGCAAAAAGGTTATCCCCCCTATTAGGCCCTGT
GAGGACGGGGGGAGGAACGACGAGAGGTCCAGCAGCGTGGGCAGTGGCAG
CAGTGCTCAGGCTGGGGGGGGGTTGACATGCAAGTCCCCTGTGTGCCGGC
TCCAGGGCCATCAGAAGGATCTTGATCCTTCTTCCCCTCGGAGGCTTAAT
TTCCTCTCGAATTCATACTCCTCTTCTCCCAATGGGGTCGCCACCGCCGC
AGGCAAGGGAGGGGGAGGGCGTCATCCTCTCAACAAGGAGGAGGGGGAAG
AGGAGGAGGAGGAGGAGGAAGTGTGCCCTCATGAATACATCGGGACGGAG
AACTTCGAAAAGGAATTCACCGGCTTGGACGTGGCGAGTGCATTTGAAGT
GCTGGAGCCGCTGTCGCCTCACTCGAATGCCATTTTTTCGAATTTCAGCA
CCGAGCCCACGATCCGGGTATTGAAGTGGAAGGGAAGGAGGGTGGGAAGG
GGGAATGGCCCGCTTGTGAAGAAAGCGAGCGAGAAGGAGGTTGGTTTGCT
CGGGGGAACAGGGAGCGTGGCTGTGGTATCTGTGAATGATGAGGAAGGAG
GGAGGGGCGGAGGACGGTGGGAAGAGATAAGGGGGCCAAGTGGCGCGTAG

Synonyms

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