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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr11 | genome | chr11:380350..383316 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO11G01010.1 vs.
Match: EWM25119.1 (molybdopterin biosynthesis protein [Nannochloropsis gaditana]) HSP 1 Score: 664.5 bits (1713), Expect = 3.900e-187 Identity = 328/420 (78.10%), Postives = 361/420 (85.95%), Query Frame = 0
Query: 319 MQLPSDFSAARQNAAAAAATFSPSSASSALPPPDLELDEIKRYSRHLILSQIGMQGQRKLKGGSVLCVGAGGLGSPLLLYLAAAGVGRLGIVDDDEVDVSNLQRQIIHGQSNVGEAKVRSAEHRIREVNPHVQVDMYEEKMTSENVLRILAPYDVVVDGTDNFPTRYLVNDACVILRKPLVYGAILRFEGQASVFNYQGGPNYRDLLPVPPAPGDVPSCAEGGVLGVLPGIIGCIQATETLKLLTGVGKPLSGRILIYNALDMTFREVGLQPDPNTPKITSLIDYDCFCSSGSGTQRHQ-----MQQGLSEPVFKRVSVKEARRKFEEDGWAPFVLDVRLPQEAEIATLPFSDLLCPHREVERVAAQLPRDQDILVYCKVGGRSAQACQKLAALGFPNVVNLDGGIIAWAQEIDARLPVY 734
MQLPS+F ++ A T S DLEL+EIKRYSRHLILSQ+GM+GQR LK SV CVGAGGLGSPLLLYLAAAGVGRLGIVDDD V++SNLQRQ+IHGQ +GEAKVRSAE RI++VNPHV VD+YEEKMT+EN LRILAPYDVVVDGTDNFPTRYL+NDACVIL KPLVYGAILRFEGQASVFNY+GGP YRDLLP PPAPGDVPSCAEGGVLGVLPG+IGCIQATETLKLLTG+GKPLSGRILIYNALDMTFRE GLQ DP+ PKITSLIDYDCFC G ++ + M + F+R+SVKEARR+ EEDGWAPFVLDVRLPQEAEI+ LPFSDLLCPHREVE+VAAQLPR+QDILVYCKVGGRSAQAC+KLAALGF N+VNLDGG+IAWA+EIDARLP Y
Sbjct: 81 MQLPSEFGSSSSGPATFGGTVSQKL--------DLELEEIKRYSRHLILSQVGMEGQRTLKASSVFCVGAGGLGSPLLLYLAAAGVGRLGIVDDDTVELSNLQRQVIHGQGTLGEAKVRSAERRIKDVNPHVLVDVYEEKMTAENTLRILAPYDVVVDGTDNFPTRYLINDACVILGKPLVYGAILRFEGQASVFNYRGGPTYRDLLPEPPAPGDVPSCAEGGVLGVLPGVIGCIQATETLKLLTGIGKPLSGRILIYNALDMTFRECGLQRDPSAPKITSLIDYDCFCGDQKGNKQSEKENASMAEATGNSAFQRISVKEARRRLEEDGWAPFVLDVRLPQEAEISKLPFSDLLCPHREVEKVAAQLPREQDILVYCKVGGRSAQACEKLAALGFTNLVNLDGGVIAWAKEIDARLPTY 492
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO11G01010.1 ID=NO11G01010.1|Name=NO11G01010.1|organism=Nannochloropsis oceanica|type=mRNA|length=2202bp ATGAAGTCAAGCCTTCCCACCAGCCGCCCACCTCCAAAGGCGGATGCGGT GGGCTGTGATAAACAGCGTGTGGCGGAAAGCCTTCTGATGTCCAGTTGCG CAGGCCAGTTTCAGCACGTAGTGGATGACCTGCGTGAGATTCTCCCGCCC AGCGTTCTGACCAAGACCTTCCTGCAAGCAGTGGCAAGGGCATATCACTC TCAGCGGGGGGTGATTGTCACAGTGGCCGGTGCCAAGGTCTTGCTGCACA AGCTGGGCGAGGTGGACGAAGGTTACCTCGACCCGAAAAACAAACAGATT CTAATGGTGGATGCCCGGGCTGAGGTGGTCTCCACGGATAACGACAATGG AAAGACGCTGATGACCGCTACTTCAGAGCCCGTGCGAGTGGAGCTGGAGC AAGCAGTGGCACACTACGTCGCAGCAAACTATGCGACAGAAGCAGCTGCG TGTGCCGTATACGCCCAGGAAGGGGCGCTGAGTGTGGTGATTTATGGGGA ACGACTAAATTTCCGGAATTTCTGGTCGGGATCTTGGCTCTCCGTTTGGG AGATCAAGGAGAAGGCGCTGTCAGGCACCATCGAGCTCTGCGCACATTAC TTCGAGGGAGGCAACGTTCAGATGCGAGCCACCAAGACCGTGCCGACCAC CCCTCTTCCTCCCACCATGGACGAGAGAACAGCTGCGGTTGCGGTAGTCG ACGCCATTCAGCAAGCCGAGGAGACGATGCAGCGGGGCCTAGAGACAACT TATTGCACATCCATGCGATGGTGGTGCCCTTTCGTGGTGGCAGGGGGGCT CGCACTCGCATGCCCTACCACATATCGCCCCAGCCATCGTATCCAGCACT TCACTACTAGGACATCCGCACGCACCACAACAGCAGCCTGGATCTCTATG CTCCCCACAGAAAGACTCGGAGCAGGAAAGGCTTACAGGAGAGCCTTCAC GTGCATGCAATTGCCGTCCGACTTTTCCGCTGCTAGACAGAATGCTGCTG CTGCTGCTGCAACCTTTTCCCCCTCTTCCGCCTCTTCCGCCCTGCCACCA CCAGACCTAGAGCTGGACGAGATCAAGCGCTACTCCCGACATCTCATTCT GTCTCAGATTGGCATGCAAGGCCAACGGAAGCTCAAGGGTGGCTCGGTTC TGTGCGTGGGAGCGGGGGGCTTAGGGTCTCCCTTGTTACTGTACTTGGCC GCGGCGGGCGTAGGTCGCCTGGGCATCGTGGATGACGACGAGGTGGACGT GTCCAATCTCCAACGACAAATCATTCATGGCCAGTCTAATGTAGGGGAAG CCAAGGTCCGTTCGGCGGAGCATCGAATCAGGGAGGTGAATCCGCACGTG CAGGTGGACATGTACGAGGAGAAGATGACTTCGGAGAACGTCTTGCGCAT TCTGGCTCCCTACGACGTCGTGGTGGACGGCACAGACAATTTCCCCACTC GATACCTAGTCAATGATGCCTGCGTCATACTGCGGAAGCCTTTAGTGTAC GGGGCCATCTTGCGGTTCGAAGGCCAGGCGTCTGTATTCAACTACCAGGG CGGGCCTAATTATCGGGACTTGCTGCCCGTTCCTCCTGCGCCGGGCGACG TGCCTTCCTGTGCGGAAGGGGGCGTGCTGGGGGTGTTGCCAGGAATCATT GGTTGCATTCAGGCCACAGAGACACTCAAGCTTCTCACAGGTGTTGGGAA GCCACTGTCCGGTCGTATCCTCATATATAATGCCCTTGACATGACCTTCC GTGAGGTCGGCCTGCAGCCGGACCCGAATACCCCCAAAATCACTTCCCTC ATCGACTACGATTGCTTTTGCAGTAGCGGTAGTGGAACACAGCGACACCA AATGCAGCAAGGATTGTCTGAGCCGGTGTTCAAACGTGTGTCGGTCAAGG AGGCACGGCGCAAGTTTGAGGAGGACGGTTGGGCCCCTTTTGTGCTGGAC GTCCGGCTGCCACAGGAGGCGGAGATCGCCACGCTGCCTTTCAGTGACCT TCTCTGCCCGCATCGGGAAGTGGAACGAGTGGCAGCGCAGCTTCCGAGGG ATCAGGACATTCTTGTGTACTGCAAAGTGGGAGGCCGCTCGGCACAGGCT TGTCAAAAGTTAGCAGCGTTGGGGTTTCCCAATGTGGTCAACCTAGACGG AGGCATTATAGCGTGGGCACAAGAGATAGACGCACGATTGCCCGTGTACT AG back to topprotein sequence of NO11G01010.1 >NO11G01010.1-protein ID=NO11G01010.1-protein|Name=NO11G01010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=734bp MKSSLPTSRPPPKADAVGCDKQRVAESLLMSSCAGQFQHVVDDLREILPP SVLTKTFLQAVARAYHSQRGVIVTVAGAKVLLHKLGEVDEGYLDPKNKQI LMVDARAEVVSTDNDNGKTLMTATSEPVRVELEQAVAHYVAANYATEAAA CAVYAQEGALSVVIYGERLNFRNFWSGSWLSVWEIKEKALSGTIELCAHY FEGGNVQMRATKTVPTTPLPPTMDERTAAVAVVDAIQQAEETMQRGLETT YCTSMRWWCPFVVAGGLALACPTTYRPSHRIQHFTTRTSARTTTAAWISM LPTERLGAGKAYRRAFTCMQLPSDFSAARQNAAAAAATFSPSSASSALPP PDLELDEIKRYSRHLILSQIGMQGQRKLKGGSVLCVGAGGLGSPLLLYLA AAGVGRLGIVDDDEVDVSNLQRQIIHGQSNVGEAKVRSAEHRIREVNPHV QVDMYEEKMTSENVLRILAPYDVVVDGTDNFPTRYLVNDACVILRKPLVY GAILRFEGQASVFNYQGGPNYRDLLPVPPAPGDVPSCAEGGVLGVLPGII GCIQATETLKLLTGVGKPLSGRILIYNALDMTFREVGLQPDPNTPKITSL IDYDCFCSSGSGTQRHQMQQGLSEPVFKRVSVKEARRKFEEDGWAPFVLD VRLPQEAEIATLPFSDLLCPHREVERVAAQLPRDQDILVYCKVGGRSAQA CQKLAALGFPNVVNLDGGIIAWAQEIDARLPVY* back to topmRNA from alignment at chr11:380350..383316- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO11G01010.1 ID=NO11G01010.1|Name=NO11G01010.1|organism=Nannochloropsis oceanica|type=mRNA|length=2967bp|location=Sequence derived from alignment at chr11:380350..383316- (Nannochloropsis oceanica) ATGAAGTCAAGCCTTCCCACCAGCCGCCCACCTCCAAAGGCGGATGCGGT
GGGCTGTGATAAACAGCGTGTGGCGGAAAGCCTTCTGATGTCCAGTTGCG
CAGGCCAGTTTCAGCACGTAGTGGATGGTAAGGGTACATTTTCTGTGGGA
TGAGCCGTGCGGTTCCCCATTCCTCGCCCTAATTTTTCTCCCCCTCTCCA
ATTCAGACCTGCGTGAGATTCTCCCGCCCAGCGTTCTGACCAAGACCTTC
CTGCAAGCAGTGGCAAGGGCATATCACTCTCAGCGGGGGGTGATTGTCAC
AGTGGCCGGTGCCAAGGTCAGTTGGGTTGTTACGTGGAAATATGGAATGG
GGAAAAGCCCGTTTTCACCATCGCCTCTCTCTCTCTCTCTTCCTTTTCAG
GTCTTGCTGCACAAGCTGGGCGAGGTGGACGAAGGTTACCTCGACCCGAA
AAACAAACAGATTCTAATGGTGGATGCCCGGGCTGAGGTACGTCGAAGCG
ATTCAGGAACTCATCAATTGCCTCATCGCTTGCTCGCTGACCGTCGCTCC
CCTCTTCTCCTACCGAAGGTGGTCTCCACGGATAACGACAATGGAAAGAC
GCTGATGACCGCTACTTCAGAGCCCGTGCGAGTGGAGCTGGAGCAAGCAG
TGGCACACTACGTCGCAGCAAACTATGCGACAGAAGCAGTGAGTTGGATT
TCATAAGTGTAACTAGTTAGCATTTTAAAAAAAAAATACAATCCTTCTCA
AAACATAGGCTGCGTGTGCCGTATACGCCCAGGAAGGGGCGCTGAGTGTG
GTGATTTATGGGGAACGACTAAATTTCCGGAATTTCTGGTCGGGATCTTG
GCTCTCCGTTTGGGAGATCAAGGAGAAGGCGCTGTCAGGCACCATCGAGG
TACGCACAGATGACGTTTGTTTGCCTGCTTTACAAGACCAATCTGACACA
TATTTTGACATGGCCAGCTCTGCGCACATTACTTCGAGGGAGGCAACGTT
CAGATGCGAGCCACCAAGACCGTGCCGACCACCCCTCTTCCTCCCACCAT
GGACGAGAGAACAGCTGCGGTTGCGGTAGTCGACGCCATTCAGCAAGCCG
AGGAGACGATGCAGGTAACTGAGCCGAGTGTGGCTACGAGGTGTATGTTG
ACAAACTTATCAGCCTCTGATCGAAAGTCTCACACGTTATGTACATTTCA
TCCACAGCGGGGCCTAGAGACAACTTATTGTAAGTTGACTGACGAAGGTT
ACCGCAATTTGCGCATGAAACTACCCGTAAGCAAACAAAGAATGGACTGG
TCAGCCGGAGCTAAGAAGCTAGTGCCCACCAAGATGTTATGACGCTGTAA
GCTTTTGTGCAGTAAAGGAAAAAAACAAGAAAAAGCATGGGGACATATGA
CATTTTCGTATGCGCCAGGGGCAGCCATTTGTTGCTTCCTTTGCGTTGCT
CTAATGCCACGTATTCTATGCGTCTACAATGACACGCTCTCTCTCTGCAT
CAATGATACATCGACACAGGCACATCCATGCGATGGTGGTGCCCTTTCGT
GGTGGCAGGGGGGCTCGCACTCGCATGCCCTACCACATATCGCCCCAGCC
ATCGTATCCAGCACTTCACTACTAGGACATCCGCACGCACCACAACAGCA
GCCTGGATCTCTATGCTCCCCACAGAAAGACTCGGAGCAGGAAAGGCTTA
CAGGAGAGCCTTCACGTGCATGCAATTGCCGTCCGACTTTTCCGCTGCTA
GACAGAATGCTGCTGCTGCTGCTGCAACCTTTTCCCCCTCTTCCGCCTCT
TCCGCCCTGCCACCACCAGACCTAGAGCTGGACGAGATCAAGCGCTACTC
CCGACATCTCATTCTGTCTCAGATTGGCATGCAAGGCCAACGGAAGCTCA
AGGGTGGCTCGGTTCTGTGCGTGGGAGCGGGGGGCTTAGGGTCTCCCTTG
TTACTGTACTTGGCCGCGGCGGGCGTAGGTCGCCTGGGCATCGTGGATGA
CGACGAGGTGGACGTGTCCAATCTCCAACGACAAATCATTCATGGCCAGT
CTAATGTAGGGGAAGCCAAGGTCCGTTCGGCGGAGCATCGAATCAGGGAG
GTGAATCCGCACGTGCAGGTGGACATGTACGAGGAGAAGATGACTTCGGA
GAACGTCTTGCGCATTCTGGCTCCCTACGACGTCGTGGTGGACGGCACAG
ACAATTTCCCCACTCGATACCTAGTCAATGATGCCTGCGTCATACTGCGG
AAGCCTTTAGTGTACGGGGCCATCTTGCGGTTCGAAGGCCAGGCGTCTGT
ATTCAACTACCAGGGCGGGCCTAATTATCGGGACTTGCTGCCCGTTCCTC
CTGCGCCGGGCGACGTGCCTTCCTGTGCGGAAGGGGGCGTGCTGGGGGTG
TTGCCAGGAATCATTGGTTGCATTCAGGCCACAGAGACACTCAAGCTTCT
CACAGGTGTTGGGAAGCCACTGTCCGGTCGTATCCTCATATATAATGCCC
TTGACATGACCTTCCGTGAGGTCGGCCTGCAGCCGGACCCGAATACCCCC
AAAATCACTTCCCTCATCGACTACGATTGCTTTTGCAGTAGCGGTAGTGG
AACACAGCGACACCAAATGCAGCAAGGATTGTCTGAGCCGGTGTTCAAAC
GTGTGTCGGTCAAGGAGGCACGGCGCAAGTTTGAGGAGGACGGTTGGGCC
CCTTTTGTGCTGGACGTCCGGCTGCCACAGGAGGCGGAGATCGCCACGCT
GCCTTTCAGTGACCTTCTCTGCCCGCATCGGGAAGTGGAACGAGTGGCAG
CGCAGCTTCCGAGGGATCAGGACATTCTTGTGTACTGCAAAGTGGGAGGC
CGCTCGGCACAGGCTTGTCAAAAGTTAGCAGCGTTGGGGTTTCCCAATGT
GGTCAACCTAGACGGAGGCATTATAGCGTGGGCACAAGAGATAGACGCAC
GATTGCCCGTGTACTAG back to topCoding sequence (CDS) from alignment at chr11:380350..383316- >NO11G01010.1 ID=NO11G01010.1|Name=NO11G01010.1|organism=Nannochloropsis oceanica|type=CDS|length=2202bp|location=Sequence derived from alignment at chr11:380350..383316- (Nannochloropsis oceanica) ATGAAGTCAAGCCTTCCCACCAGCCGCCCACCTCCAAAGGCGGATGCGGT GGGCTGTGATAAACAGCGTGTGGCGGAAAGCCTTCTGATGTCCAGTTGCG CAGGCCAGTTTCAGCACGTAGTGGATGACCTGCGTGAGATTCTCCCGCCC AGCGTTCTGACCAAGACCTTCCTGCAAGCAGTGGCAAGGGCATATCACTC TCAGCGGGGGGTGATTGTCACAGTGGCCGGTGCCAAGGTCTTGCTGCACA AGCTGGGCGAGGTGGACGAAGGTTACCTCGACCCGAAAAACAAACAGATT CTAATGGTGGATGCCCGGGCTGAGGTGGTCTCCACGGATAACGACAATGG AAAGACGCTGATGACCGCTACTTCAGAGCCCGTGCGAGTGGAGCTGGAGC AAGCAGTGGCACACTACGTCGCAGCAAACTATGCGACAGAAGCAGCTGCG TGTGCCGTATACGCCCAGGAAGGGGCGCTGAGTGTGGTGATTTATGGGGA ACGACTAAATTTCCGGAATTTCTGGTCGGGATCTTGGCTCTCCGTTTGGG AGATCAAGGAGAAGGCGCTGTCAGGCACCATCGAGCTCTGCGCACATTAC TTCGAGGGAGGCAACGTTCAGATGCGAGCCACCAAGACCGTGCCGACCAC CCCTCTTCCTCCCACCATGGACGAGAGAACAGCTGCGGTTGCGGTAGTCG ACGCCATTCAGCAAGCCGAGGAGACGATGCAGCGGGGCCTAGAGACAACT TATTGCACATCCATGCGATGGTGGTGCCCTTTCGTGGTGGCAGGGGGGCT CGCACTCGCATGCCCTACCACATATCGCCCCAGCCATCGTATCCAGCACT TCACTACTAGGACATCCGCACGCACCACAACAGCAGCCTGGATCTCTATG CTCCCCACAGAAAGACTCGGAGCAGGAAAGGCTTACAGGAGAGCCTTCAC GTGCATGCAATTGCCGTCCGACTTTTCCGCTGCTAGACAGAATGCTGCTG CTGCTGCTGCAACCTTTTCCCCCTCTTCCGCCTCTTCCGCCCTGCCACCA CCAGACCTAGAGCTGGACGAGATCAAGCGCTACTCCCGACATCTCATTCT GTCTCAGATTGGCATGCAAGGCCAACGGAAGCTCAAGGGTGGCTCGGTTC TGTGCGTGGGAGCGGGGGGCTTAGGGTCTCCCTTGTTACTGTACTTGGCC GCGGCGGGCGTAGGTCGCCTGGGCATCGTGGATGACGACGAGGTGGACGT GTCCAATCTCCAACGACAAATCATTCATGGCCAGTCTAATGTAGGGGAAG CCAAGGTCCGTTCGGCGGAGCATCGAATCAGGGAGGTGAATCCGCACGTG CAGGTGGACATGTACGAGGAGAAGATGACTTCGGAGAACGTCTTGCGCAT TCTGGCTCCCTACGACGTCGTGGTGGACGGCACAGACAATTTCCCCACTC GATACCTAGTCAATGATGCCTGCGTCATACTGCGGAAGCCTTTAGTGTAC GGGGCCATCTTGCGGTTCGAAGGCCAGGCGTCTGTATTCAACTACCAGGG CGGGCCTAATTATCGGGACTTGCTGCCCGTTCCTCCTGCGCCGGGCGACG TGCCTTCCTGTGCGGAAGGGGGCGTGCTGGGGGTGTTGCCAGGAATCATT GGTTGCATTCAGGCCACAGAGACACTCAAGCTTCTCACAGGTGTTGGGAA GCCACTGTCCGGTCGTATCCTCATATATAATGCCCTTGACATGACCTTCC GTGAGGTCGGCCTGCAGCCGGACCCGAATACCCCCAAAATCACTTCCCTC ATCGACTACGATTGCTTTTGCAGTAGCGGTAGTGGAACACAGCGACACCA AATGCAGCAAGGATTGTCTGAGCCGGTGTTCAAACGTGTGTCGGTCAAGG AGGCACGGCGCAAGTTTGAGGAGGACGGTTGGGCCCCTTTTGTGCTGGAC GTCCGGCTGCCACAGGAGGCGGAGATCGCCACGCTGCCTTTCAGTGACCT TCTCTGCCCGCATCGGGAAGTGGAACGAGTGGCAGCGCAGCTTCCGAGGG ATCAGGACATTCTTGTGTACTGCAAAGTGGGAGGCCGCTCGGCACAGGCT TGTCAAAAGTTAGCAGCGTTGGGGTTTCCCAATGTGGTCAACCTAGACGG AGGCATTATAGCGTGGGCACAAGAGATAGACGCACGATTGCCCGTGTACT AG back to top
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