Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr10 genome chr10:1102952..1108098 +
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G03810.1 vs.
Match: EWM25577.1 (sulfotransferase [Nannochloropsis gaditana])
HSP 1 Score: 562.0 bits (1447), Expect = 3.300e-156
Identity = 299/619 (48.30%), Postives = 383/619 (61.87%), Query Frame = 0
Query: 281 MYIRWAHLWKEGGVYTDFSVLWHRPFPAERYFDMSPPACSPFDVKARENYPSRPEPSVLGPEQVTPVEKRLAFPTPPAGMLGSMHMHFHKHDRVLACAMIEIGTPRFRKCFNESTEYGRDCVQTIMRLCIAHENTQVGGGE-----EGKEESPPPPSAEGRKDAAMSSLPSSLPPSKHS---VREGGVVAWFQCNGSAGDAAPAVERWREDPQVAGSSALWLGRYVRMGLVLSPPSSVRWSDFPPSLDPSLPPSLYARATAESVRLSKWNPAQTCEEGG---GREGGKEGVCGHSEFIAGTRNCGPSFFIPGTQKGASSFLFDALTRHPQVLQPTISSQYKEPGVYMHLAKEKRLRYTFRSDIFPFVEAGEPFHSGEATVAYMYQPGSPRMIKKDNPRAKFIFALRDPIARAWSDYRFNFDYFQKKNMTFKEVVERGITDFEDCFSSSPE--------GQK-RRNQSRIDALNRLRAKEEELGVWEGKEVGREDDIPFPDLFSCPCSDPHRIIFKGLYVFSYEYYTTFFPAENLHVVTAEQLRENQTETLTTATSFLGLCPYDWGHEDLSPVHVTKSKAPLTQGEGGLEGEIEERLRAFYSPYNRKLYKLLGRDLGWEK 880
MYIR AHLW+EGG YTDF+VLWHRPFP RYFD+S ACSP D + + + + + S + P E R++FPTPP+G SMHMHF KHD VLACAM+ +G P KC+ ES +YGR+CV IM CI ENT + E E K + P S+ SS + PPS +S VR+G +V WF C+ AG + P + WR+DP+V S ALW+G YV MG++ +P S RW D P S+ + P SLYARATA+ + L W PAQ+C + G G + EG C +SE+I GTR C PSFFIPG QKGAS+FLF L+RHPQVLQP SQYKE G Y +R RY +RS+ FP+ GEPFH G+A+V Y+ +P +I KDNPRAKF+F+LRDP+ RAWSDYRF + K TFKEVV + I + +DC + PE G+K + +S A + + +L R D F C SDP RI+ +GLYV +Y A+NLHVVT E+++EN TL A +FL LCPYDW EDL PVHVT K P + +GGL+ EIE LRAFY P+N +LY++LGR+LGW+K
Sbjct: 1 MYIRLAHLWREGGYYTDFNVLWHRPFPPARYFDVSLRACSPVDKEGLQAHVNALQESFNRTGKAPPQEMRMSFPTPPSGAFPSMHMHFLKHDPVLACAMLGLGDPENEKCYAESDDYGRECVIAIMNRCIVQENTFLAEKELCVIQERKSQRQLPASSS-------SSSRAPCPPSHYSTMRVRQGHIVEWFNCDLRAGMSLPLADDWRQDPRVIRSHALWMGPYVSMGVIPTPTSMFRW-DNPFSIPSTHPDSLYARATADVIALHSWAPAQSCPKLGLEAGVQKAAEGRCTYSEYIEGTRICAPSFFIPGVQKGASTFLFAKLSRHPQVLQPIAGSQYKEVGTY----TTRRERYPYRSEFFPYTAPGEPFHVGDASVPYVSSLQAPELILKDNPRAKFLFSLRDPVLRAWSDYRFQKPLYSTKGWTFKEVVRKSIQELQDCCAQIPEIKPEDDPQGKKVEKEKSAKKARQQKKRMSRDLREENQNHCERLDAYAFS---RCNQSDPGRIVSRGLYVIFINHYLEHVAADNLHVVTVEEMKENPVMTLGRAAAFLELCPYDWNREDLDPVHVTGYKGPAKE-DGGLDEEIERELRAFYRPFNARLYEVLGRNLGWDK 603
The following BLAST results are available for this feature:
BLAST of NO10G03810.1 vs.
Analysis Date: 2017-10-25 (
Homology annotation for N. oceanica IMET1 )
Total hits: 1
200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 Expect = 3.30e-156 / Id = 48.30 Sequence EWM25577.1
Match Name E-value Identity Description
EWM25577.1 3.300e-156 48.30 sulfotransferase [Nannochloropsis gaditana] [more]
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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence
>NO10G03810.1 ID=NO10G03810.1|Name=NO10G03810.1|organism=Nannochloropsis oceanica|type=mRNA|length=2640bp back to top protein sequence of NO10G03810.1
>NO10G03810.1-protein ID=NO10G03810.1-protein|Name=NO10G03810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=880bp back to top mRNA from alignment at chr10:1102952..1108098+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G03810.1 ID=NO10G03810.1|Name=NO10G03810.1|organism=Nannochloropsis oceanica|type=mRNA|length=5147bp|location=Sequence derived from alignment at chr10:1102952..1108098+ (Nannochloropsis oceanica)ATGCTTCGCTCCAATCGACCCACCCTCCCAACCCTCTTCTATGTGCTGGG
CGGCTTGTTTGGCTTCCTCCTGCTCTTGTCCTCCCGGAGGCTGCCAGTAG
AGCTCTCTAGCCAAGGCCTTGGACCTCACTTGAGGAACTTCCAGGAGCGG
GCGGGAGAACACGGGGGAAGGAGGGAGGATGGGGAGCTAGTGTGGACAAC
GGAGAAAAGCTTACGGCCGCATGAAACTAAAGAGGAAAGGAAGGACGGGG
ACCTTGAAAAGGAGAAGGGATCAGTAGAAGCGGGCAGTCATGTGAGCCAT
GGTGCGGCAGGGGCTCTTTCTGAGCAGGGTGGTAGCGCGAAGACGGACCA
CGAAAAGGCACCCAGGGAGGACGAGGACGAGGAGTCGGCAGCAGCAGCAG
CAACAGCAATACCTCGAGAAGAAAATGAGGGAGGGGAGGAGAAGCGGATC
AAGGTCTTCATGGACTTTCAGCAATCCCGAGCGAGTTGGGGCGTGGCGCA
TAATCGAGCCTTGGAGAGCGTACTCACGCAGCACCCTGAGGCAGAGATCG
TGGTTCTGGTGTCGGCACCAG GTGGGACGAAAAATAGGGATAGGGCTAGG
GGGAGGGAAAGCATGTCTTGCATGCGGCTCCATTCCCTTCCTTTGCGCTG
ACCTTTCCTCCCTCCCTCCCTCCTCCCTTCCTCCCTTCCTCCCTTCCTTT
CTCCCTCACTCCCTCCCTCTTTCCCTCCTTTAGACTTATACAAGAAGTAC
CATTACGCGGATGCATTGGGCAGACCATTCTTCCAGAAATATTTCAAGAG
GGGCTATAACGTTACCATCCAGCCCGTGAATGAAAACACTTTCCTCGCCG
AGGGGATGGACGAAG GTAGGTAGGTAGGTAGGGAGGGAGGAAGGGAAGGA
GGGAGGGAGCAAATGGAGGAGGGAAGGGAGGAAGGAGGCGAATATATGTC
AAGCAGCAGGATTGACAGAGTCGACGATTTTCATCCTCCCTCCCTCCCTC
CCTCCCTCTCTCTCTCCTTCTAGAACTGCCTTATCGTAAATAGGATCGCA
CCTCGTCCGATTGAGAATCCGAGCTCTCACAAATCCCTCCCTCCTTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCAGACCTGCCTGGCCGTGACTGGTTTGTACG
AGAGTTCTACAACAGCTCCTTGCCCGACTCGCAATGCCCAAAATGTAACC
AGCTTCTCTTTCG GTGCGTCGACAGGAAAGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAACGACTTTATAACGGCCCACGGTGCGATCCAAGCCTTGCAT
CACCCCTCCCTCCCACCGTCCCTCCCTCACTCCCTTTCTTCCACAGCGAG
TTTAATCAAGCCCTTACCGCCGTCATTCCTATGGCGCCACTCATGTACAT
CCGGTGGGCTCACTTGTGGAAAGAAGGAGGCGTCTACACCGACTTCTCGG
TCCTGTGGCACCGGCCGTTCCCTGCCGAGCG GTAGGGAGGGAGGGAGGAA
GGGAGGGAGGGAGGGAGGGAAGGGTGCCATGCCAGTGTCGGATGCACCTG
ATCCTCCCTTACTCTCGTCATTCTCATCTTCCCTCCCTCCCTCTGTTGCT
CCCACTCCCTCCCTTCCTCCTTCCCTTCCTCCCTCCTGCAGGTATTTTGA
CATGTCTCCTCCTGCCTGCTCTCCCTTTGACGTAAAGGCCAGGGAAAATT
ATCCATCGCGGCCCGAGCCAAGTGTCCTGGGACCTGAGCAAGTCACGCCG
GTGGAGAAG GTGAGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGGAAGTTGATAATGTGAGTGTATGCCCTGATTCTCAATCC
TCTCTCTCCCTATCACCGCGCCTCGTTTTCCCAGCGCCTTTAATATTCAG
TTATTGACCCTGAATACACTCACTCAATCAAATAATTGCACATTTCGTTC
ATCGATTTATTCACCAATTCGCGCATACCTCCCTTTCCAACCCCTCTCCT
CCTCCCTCATCACAGCGCCTGCTCTCTCTCCCCACGCGGCCTTCGTTCAG
TATCGATCTATCAATCAATCATTCTATCAATGACTCAATTAATTCATCCA
TCCAGTTATCCTCTAACCCCCCTTCTCCTCCCCCTCCTAATCACAGCGCT
TGGCTTTCCCCACGCCGCCCGCCGGGATGCTAGGCTCCATGCACATGCAC
TTCCACAAACACGACCGAGTCCTGGCCT GTAAGAAAAGGAGGGAGGGAGG
GAGGGAGGGAGGGAAGGAGGGCAGGAGAATGTAGCTGAGGCGATGTTTAT
TCCCGTTACGCGGCACCATCAACAGGCGCGATGATCGAGATCGGCACTCC
CAGATTCCGCAAATGCTTCAATGAAAGTACAGAG GTGAGATTCTTCTCTT
CCTCTCCCTCCCTTCCTCCCTCCTTCCCTCCGCCCCTCCGTCCGCCCCTT
CCTCCCTCCCTTCTTCCCTGTGTCTCCATCCAGTCTATCCCTCCCTCCCT
GCTTTTCCCTTCATTTCGTCTGTCCTTCCCTCCCTCCCTTCCCTCAGTAC
GGCCGCGACTGCGTTCAGACCATCATGCGCCTGTGCATCGCCCACGAGAA
CACCCAAGTGGGCGGGGGGGAGGAAGGGAAGGAGGAAAGCCCTCCACCTC
CTTCGGCGGAAGGCAGGAAGGATGCAGCCATGTCCTCCCTCCCTTCCTCC
CTTCCGCCTTCGAAACACTCTGTCCGGGAGGGAGGTGTGGTGGCATGGTT
CCAATGCAACGGCTCTGCTGGCGATGCTGCCCCTGCTGTCGAGAGGTGGA
GGGAAGATCCACAAGTG GTAAGGAAAGAGGGCGGGAGCGGGGGTCACTCC
TTACACTAAACATAAATAAAAATAAAATAAAAAAAAAATAAAAATAAAAT
AAAATAAAATAAAATAAATAAATAAATAAATAAATAAAACACCCCTCCGT
ATATTTATACATTTCCACATTCCCCTTACATTCCCCATCTTCCCTCCTTC
CTTTCCTCCCTCCCTCCCTCCCTCCCTAGGCCGGTTCCTCAGCCCTCTGG
CTTGGCCGATACGTTCGCATGGGGTTGGTTCTCTCTCCTCCCTCCTCTGT
CCGCTGGAGTGACTTCCCTCCCTCCCTCGATCCTTCCCTCCCTCCCTCCC
TTTACGCGCGCGCCACAGCCGAGAGCGTGCGGCTCTCGAAGTGGAACCCT
GCACAGACCTGCGAAGAGGGAGGAGGGAGAGAGGGAGGGAAGGAGGGAGT
ATGTGGCCACTCGGAGTTCATCGCAGGCACGAGAAATTGTGGACCGTCTT
TTTTCATTCCCGGGACTCAAAAGGGTGCGTCTTCCTTCTTATTCGATGCC
CTGACCAGACACCCGCAGGTGCTGCAG GTAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGCGATGTACGCAAG
GTCTAATGTCTGCTTTCTAAGTGTCGGAAACATACGTCATATATTGGTCC
TTCACTTTTTTCCCTCCCTCCTTTCCTCTCTCCCTCCTTCCTTTCCCGGT
CCTTTCCCGGAACACGGGCTTAATGTTAGGGAATCGAGCAAAACCTAATC
TCCCTCCCCCTCTCCCTCCCTCCCTCTCCCCCCCCGTCAGCCCACCATCA
GCTCTCAATATAAGGAGCCCGGGGTATACATGCACCTCGCGAAAGAAAAG
CGACTTCGTTACACATTCAGAAGCGACATATTCCCTTTTGTCGAAGCTGG
G GTAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGCAAGAGGGCGGGATG
AGAATTTACACCAACAAATAACGCTCCGTCCAACCGCCTTTTTTTGATTC
TGTCGAGAAACCTATACACCAGCAATCCTTCTGTCTCCTTTATTCATCTC
TCCCCCTCCCCCATCCCCCTTTCCCTCCCCCCCTCCCTCCCTCATGCTCT
CAGGAGCCCTTCCACTCGGGCGAAGCCACTGTCGCCTACATGTACCAGCC
CGGGAGTCCCCGCATGATAAAAAAAGACAATCCTCGTGCCAAATTTATTT
TTGCCTTGAGAGACCCTATTGCGAGGGCTTGGAGTGATTACCGCTTCAAC
TTTGATT GTAGGTCGTGGGTTAGGTGCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTCCTCCCTCCCTCCCTC
CCTAGCTTCTCCGGATGACCTTTCCTATTCACCGGGCTTCTCTCCCTCCC
TCTCTCCCTCCCTCACTTCCATTCCTTCATCTCCCCCATAGACTTCCAGA
AAAAGAACATGACATTCAAGGAAGTGGTGGAGAGAGGCATTACCGATTTC
GAA GTGAGAAATGAAGGAGGGAGGGAGGGAGGGAAGGATGGAGAGAGGGA
TGGACAGGACAGGATTGAAACGTAAATTTAAATCTTCATATATTTATGCT
CCCATATATACGCAGGACTGCTTTTCTTCCTCACCCGAGGGCCAGAAAAG
GAGGAATCAGAGTCGGATCGATGCGCTGAATCGATTACGTGCCAAGGAGG
AGGAGTTGGGGGTCTGGGAAGGGAAGGAGGTCGGGAGGGAAGACGACATC
CCTTTCCCTGATTTATTTTCGTGCCCGTGTTCGGATCCCCATCGGATTAT
TTTTAAGGGCCTGTACGTGTTTTCCTACGAGTACTACACCACATTCTTCC
CGGCCGAAAACCTGCACGTGGTCACTGCCGAACAGCTACGG GTAAGGGGC
GGGGGGCGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGGCGCGGACGGGCT
ATTGATATGGAAACCATGGTTGGAGTCGATGTCTCATCTCTCTTGCCGTC
TCTTCTTCATCTGTAGGAAAATCAAACCGAGACGCTGACGACGGCCACCT
CCTTCCTGGGCCTCTGTCCTTATGACTGGGGTCATGAAGACCTCTCCCCG
GTGCATGTCACTAAATCGAAAGCCCCGCTGACACAGGGTGAGGGGGGCCT
GGAAGGGGAGATCGAGGAGCGGTTGCGAGCTTTCTACTCTCCGTACAACC
GAAAGTTATATAAATTGTTGGGAAGGGACTTGGGGTGGGAGAAGTAG back to top Coding sequence (CDS) from alignment at chr10:1102952..1108098+
>NO10G03810.1 ID=NO10G03810.1|Name=NO10G03810.1|organism=Nannochloropsis oceanica|type=CDS|length=2640bp|location=Sequence derived from alignment at chr10:1102952..1108098+ (Nannochloropsis oceanica) back to top