NO10G03810.1, NO10G03810.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G03810.1
Unique Name	NO10G03810.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2640
Alignment location	chr10:1102952..1108098 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:1102952..1108098 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G03810.1 vs.
Match: EWM25577.1 (sulfotransferase [Nannochloropsis gaditana])

HSP 1 Score: 562.0 bits (1447), Expect = 3.300e-156
Identity = 299/619 (48.30%), Postives = 383/619 (61.87%), Query Frame = 0

Query:  281 MYIRWAHLWKEGGVYTDFSVLWHRPFPAERYFDMSPPACSPFDVKARENYPSRPEPSVLGPEQVTPVEKRLAFPTPPAGMLGSMHMHFHKHDRVLACAMIEIGTPRFRKCFNESTEYGRDCVQTIMRLCIAHENTQVGGGE-----EGKEESPPPPSAEGRKDAAMSSLPSSLPPSKHS---VREGGVVAWFQCNGSAGDAAPAVERWREDPQVAGSSALWLGRYVRMGLVLSPPSSVRWSDFPPSLDPSLPPSLYARATAESVRLSKWNPAQTCEEGG---GREGGKEGVCGHSEFIAGTRNCGPSFFIPGTQKGASSFLFDALTRHPQVLQPTISSQYKEPGVYMHLAKEKRLRYTFRSDIFPFVEAGEPFHSGEATVAYMYQPGSPRMIKKDNPRAKFIFALRDPIARAWSDYRFNFDYFQKKNMTFKEVVERGITDFEDCFSSSPE--------GQK-RRNQSRIDALNRLRAKEEELGVWEGKEVGREDDIPFPDLFSCPCSDPHRIIFKGLYVFSYEYYTTFFPAENLHVVTAEQLRENQTETLTTATSFLGLCPYDWGHEDLSPVHVTKSKAPLTQGEGGLEGEIEERLRAFYSPYNRKLYKLLGRDLGWEK 880
            MYIR AHLW+EGG YTDF+VLWHRPFP  RYFD+S  ACSP D +  + + +  + S     +  P E R++FPTPP+G   SMHMHF KHD VLACAM+ +G P   KC+ ES +YGR+CV  IM  CI  ENT +   E     E K +   P S+        SS  +  PPS +S   VR+G +V WF C+  AG + P  + WR+DP+V  S ALW+G YV MG++ +P S  RW D P S+  + P SLYARATA+ + L  W PAQ+C + G   G +   EG C +SE+I GTR C PSFFIPG QKGAS+FLF  L+RHPQVLQP   SQYKE G Y      +R RY +RS+ FP+   GEPFH G+A+V Y+    +P +I KDNPRAKF+F+LRDP+ RAWSDYRF    +  K  TFKEVV + I + +DC +  PE        G+K  + +S   A  + +    +L         R D   F     C  SDP RI+ +GLYV    +Y     A+NLHVVT E+++EN   TL  A +FL LCPYDW  EDL PVHVT  K P  + +GGL+ EIE  LRAFY P+N +LY++LGR+LGW+K
Sbjct:    1 MYIRLAHLWREGGYYTDFNVLWHRPFPPARYFDVSLRACSPVDKEGLQAHVNALQESFNRTGKAPPQEMRMSFPTPPSGAFPSMHMHFLKHDPVLACAMLGLGDPENEKCYAESDDYGRECVIAIMNRCIVQENTFLAEKELCVIQERKSQRQLPASSS-------SSSRAPCPPSHYSTMRVRQGHIVEWFNCDLRAGMSLPLADDWRQDPRVIRSHALWMGPYVSMGVIPTPTSMFRW-DNPFSIPSTHPDSLYARATADVIALHSWAPAQSCPKLGLEAGVQKAAEGRCTYSEYIEGTRICAPSFFIPGVQKGASTFLFAKLSRHPQVLQPIAGSQYKEVGTY----TTRRERYPYRSEFFPYTAPGEPFHVGDASVPYVSSLQAPELILKDNPRAKFLFSLRDPVLRAWSDYRFQKPLYSTKGWTFKEVVRKSIQELQDCCAQIPEIKPEDDPQGKKVEKEKSAKKARQQKKRMSRDLREENQNHCERLDAYAFS---RCNQSDPGRIVSRGLYVIFINHYLEHVAADNLHVVTVEEMKENPVMTLGRAAAFLELCPYDWNREDLDPVHVTGYKGPAKE-DGGLDEEIERELRAFYRPFNARLYEVLGRNLGWDK 603

The following BLAST results are available for this feature:

BLAST of NO10G03810.1 vs.

BLAST of NO10G03810.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25577.1	3.300e-156	48.30	sulfotransferase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G03810	NO10G03810	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03810.1	NO10G03810.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03810.1.cds1	NO10G03810.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds2	NO10G03810.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds3	NO10G03810.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds4	NO10G03810.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds5	NO10G03810.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds6	NO10G03810.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds7	NO10G03810.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds8	NO10G03810.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds9	NO10G03810.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds10	NO10G03810.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds11	NO10G03810.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds12	NO10G03810.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds13	NO10G03810.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03810.1.cds14	NO10G03810.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:1102952..1108098+
coding sequence from alignment at chr10:1102952..1108098+

mRNA sequence

>NO10G03810.1 ID=NO10G03810.1|Name=NO10G03810.1|organism=Nannochloropsis oceanica|type=mRNA|length=2640bp
ATGCTTCGCTCCAATCGACCCACCCTCCCAACCCTCTTCTATGTGCTGGG
CGGCTTGTTTGGCTTCCTCCTGCTCTTGTCCTCCCGGAGGCTGCCAGTAG
AGCTCTCTAGCCAAGGCCTTGGACCTCACTTGAGGAACTTCCAGGAGCGG
GCGGGAGAACACGGGGGAAGGAGGGAGGATGGGGAGCTAGTGTGGACAAC
GGAGAAAAGCTTACGGCCGCATGAAACTAAAGAGGAAAGGAAGGACGGGG
ACCTTGAAAAGGAGAAGGGATCAGTAGAAGCGGGCAGTCATGTGAGCCAT
GGTGCGGCAGGGGCTCTTTCTGAGCAGGGTGGTAGCGCGAAGACGGACCA
CGAAAAGGCACCCAGGGAGGACGAGGACGAGGAGTCGGCAGCAGCAGCAG
CAACAGCAATACCTCGAGAAGAAAATGAGGGAGGGGAGGAGAAGCGGATC
AAGGTCTTCATGGACTTTCAGCAATCCCGAGCGAGTTGGGGCGTGGCGCA
TAATCGAGCCTTGGAGAGCGTACTCACGCAGCACCCTGAGGCAGAGATCG
TGGTTCTGGTGTCGGCACCAGACTTATACAAGAAGTACCATTACGCGGAT
GCATTGGGCAGACCATTCTTCCAGAAATATTTCAAGAGGGGCTATAACGT
TACCATCCAGCCCGTGAATGAAAACACTTTCCTCGCCGAGGGGATGGACG
AAGACCTGCCTGGCCGTGACTGGTTTGTACGAGAGTTCTACAACAGCTCC
TTGCCCGACTCGCAATGCCCAAAATGTAACCAGCTTCTCTTTCGCGAGTT
TAATCAAGCCCTTACCGCCGTCATTCCTATGGCGCCACTCATGTACATCC
GGTGGGCTCACTTGTGGAAAGAAGGAGGCGTCTACACCGACTTCTCGGTC
CTGTGGCACCGGCCGTTCCCTGCCGAGCGGTATTTTGACATGTCTCCTCC
TGCCTGCTCTCCCTTTGACGTAAAGGCCAGGGAAAATTATCCATCGCGGC
CCGAGCCAAGTGTCCTGGGACCTGAGCAAGTCACGCCGGTGGAGAAGCGC
TTGGCTTTCCCCACGCCGCCCGCCGGGATGCTAGGCTCCATGCACATGCA
CTTCCACAAACACGACCGAGTCCTGGCCTGCGCGATGATCGAGATCGGCA
CTCCCAGATTCCGCAAATGCTTCAATGAAAGTACAGAGTACGGCCGCGAC
TGCGTTCAGACCATCATGCGCCTGTGCATCGCCCACGAGAACACCCAAGT
GGGCGGGGGGGAGGAAGGGAAGGAGGAAAGCCCTCCACCTCCTTCGGCGG
AAGGCAGGAAGGATGCAGCCATGTCCTCCCTCCCTTCCTCCCTTCCGCCT
TCGAAACACTCTGTCCGGGAGGGAGGTGTGGTGGCATGGTTCCAATGCAA
CGGCTCTGCTGGCGATGCTGCCCCTGCTGTCGAGAGGTGGAGGGAAGATC
CACAAGTGGCCGGTTCCTCAGCCCTCTGGCTTGGCCGATACGTTCGCATG
GGGTTGGTTCTCTCTCCTCCCTCCTCTGTCCGCTGGAGTGACTTCCCTCC
CTCCCTCGATCCTTCCCTCCCTCCCTCCCTTTACGCGCGCGCCACAGCCG
AGAGCGTGCGGCTCTCGAAGTGGAACCCTGCACAGACCTGCGAAGAGGGA
GGAGGGAGAGAGGGAGGGAAGGAGGGAGTATGTGGCCACTCGGAGTTCAT
CGCAGGCACGAGAAATTGTGGACCGTCTTTTTTCATTCCCGGGACTCAAA
AGGGTGCGTCTTCCTTCTTATTCGATGCCCTGACCAGACACCCGCAGGTG
CTGCAGCCCACCATCAGCTCTCAATATAAGGAGCCCGGGGTATACATGCA
CCTCGCGAAAGAAAAGCGACTTCGTTACACATTCAGAAGCGACATATTCC
CTTTTGTCGAAGCTGGGGAGCCCTTCCACTCGGGCGAAGCCACTGTCGCC
TACATGTACCAGCCCGGGAGTCCCCGCATGATAAAAAAAGACAATCCTCG
TGCCAAATTTATTTTTGCCTTGAGAGACCCTATTGCGAGGGCTTGGAGTG
ATTACCGCTTCAACTTTGATTACTTCCAGAAAAAGAACATGACATTCAAG
GAAGTGGTGGAGAGAGGCATTACCGATTTCGAAGACTGCTTTTCTTCCTC
ACCCGAGGGCCAGAAAAGGAGGAATCAGAGTCGGATCGATGCGCTGAATC
GATTACGTGCCAAGGAGGAGGAGTTGGGGGTCTGGGAAGGGAAGGAGGTC
GGGAGGGAAGACGACATCCCTTTCCCTGATTTATTTTCGTGCCCGTGTTC
GGATCCCCATCGGATTATTTTTAAGGGCCTGTACGTGTTTTCCTACGAGT
ACTACACCACATTCTTCCCGGCCGAAAACCTGCACGTGGTCACTGCCGAA
CAGCTACGGGAAAATCAAACCGAGACGCTGACGACGGCCACCTCCTTCCT
GGGCCTCTGTCCTTATGACTGGGGTCATGAAGACCTCTCCCCGGTGCATG
TCACTAAATCGAAAGCCCCGCTGACACAGGGTGAGGGGGGCCTGGAAGGG
GAGATCGAGGAGCGGTTGCGAGCTTTCTACTCTCCGTACAACCGAAAGTT
ATATAAATTGTTGGGAAGGGACTTGGGGTGGGAGAAGTAG

protein sequence of NO10G03810.1

>NO10G03810.1-protein ID=NO10G03810.1-protein|Name=NO10G03810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=880bp
MLRSNRPTLPTLFYVLGGLFGFLLLLSSRRLPVELSSQGLGPHLRNFQER
AGEHGGRREDGELVWTTEKSLRPHETKEERKDGDLEKEKGSVEAGSHVSH
GAAGALSEQGGSAKTDHEKAPREDEDEESAAAAATAIPREENEGGEEKRI
KVFMDFQQSRASWGVAHNRALESVLTQHPEAEIVVLVSAPDLYKKYHYAD
ALGRPFFQKYFKRGYNVTIQPVNENTFLAEGMDEDLPGRDWFVREFYNSS
LPDSQCPKCNQLLFREFNQALTAVIPMAPLMYIRWAHLWKEGGVYTDFSV
LWHRPFPAERYFDMSPPACSPFDVKARENYPSRPEPSVLGPEQVTPVEKR
LAFPTPPAGMLGSMHMHFHKHDRVLACAMIEIGTPRFRKCFNESTEYGRD
CVQTIMRLCIAHENTQVGGGEEGKEESPPPPSAEGRKDAAMSSLPSSLPP
SKHSVREGGVVAWFQCNGSAGDAAPAVERWREDPQVAGSSALWLGRYVRM
GLVLSPPSSVRWSDFPPSLDPSLPPSLYARATAESVRLSKWNPAQTCEEG
GGREGGKEGVCGHSEFIAGTRNCGPSFFIPGTQKGASSFLFDALTRHPQV
LQPTISSQYKEPGVYMHLAKEKRLRYTFRSDIFPFVEAGEPFHSGEATVA
YMYQPGSPRMIKKDNPRAKFIFALRDPIARAWSDYRFNFDYFQKKNMTFK
EVVERGITDFEDCFSSSPEGQKRRNQSRIDALNRLRAKEEELGVWEGKEV
GREDDIPFPDLFSCPCSDPHRIIFKGLYVFSYEYYTTFFPAENLHVVTAE
QLRENQTETLTTATSFLGLCPYDWGHEDLSPVHVTKSKAPLTQGEGGLEG
EIEERLRAFYSPYNRKLYKLLGRDLGWEK*

mRNA from alignment at chr10:1102952..1108098+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G03810.1 ID=NO10G03810.1|Name=NO10G03810.1|organism=Nannochloropsis oceanica|type=mRNA|length=5147bp|location=Sequence derived from alignment at chr10:1102952..1108098+ (Nannochloropsis oceanica)
ATGCTTCGCTCCAATCGACCCACCCTCCCAACCCTCTTCTATGTGCTGGG
CGGCTTGTTTGGCTTCCTCCTGCTCTTGTCCTCCCGGAGGCTGCCAGTAG
AGCTCTCTAGCCAAGGCCTTGGACCTCACTTGAGGAACTTCCAGGAGCGG
GCGGGAGAACACGGGGGAAGGAGGGAGGATGGGGAGCTAGTGTGGACAAC
GGAGAAAAGCTTACGGCCGCATGAAACTAAAGAGGAAAGGAAGGACGGGG
ACCTTGAAAAGGAGAAGGGATCAGTAGAAGCGGGCAGTCATGTGAGCCAT
GGTGCGGCAGGGGCTCTTTCTGAGCAGGGTGGTAGCGCGAAGACGGACCA
CGAAAAGGCACCCAGGGAGGACGAGGACGAGGAGTCGGCAGCAGCAGCAG
CAACAGCAATACCTCGAGAAGAAAATGAGGGAGGGGAGGAGAAGCGGATC
AAGGTCTTCATGGACTTTCAGCAATCCCGAGCGAGTTGGGGCGTGGCGCA
TAATCGAGCCTTGGAGAGCGTACTCACGCAGCACCCTGAGGCAGAGATCG
TGGTTCTGGTGTCGGCACCAGGTGGGACGAAAAATAGGGATAGGGCTAGG
GGGAGGGAAAGCATGTCTTGCATGCGGCTCCATTCCCTTCCTTTGCGCTG
ACCTTTCCTCCCTCCCTCCCTCCTCCCTTCCTCCCTTCCTCCCTTCCTTT
CTCCCTCACTCCCTCCCTCTTTCCCTCCTTTAGACTTATACAAGAAGTAC
CATTACGCGGATGCATTGGGCAGACCATTCTTCCAGAAATATTTCAAGAG
GGGCTATAACGTTACCATCCAGCCCGTGAATGAAAACACTTTCCTCGCCG
AGGGGATGGACGAAGGTAGGTAGGTAGGTAGGGAGGGAGGAAGGGAAGGA
GGGAGGGAGCAAATGGAGGAGGGAAGGGAGGAAGGAGGCGAATATATGTC
AAGCAGCAGGATTGACAGAGTCGACGATTTTCATCCTCCCTCCCTCCCTC
CCTCCCTCTCTCTCTCCTTCTAGAACTGCCTTATCGTAAATAGGATCGCA
CCTCGTCCGATTGAGAATCCGAGCTCTCACAAATCCCTCCCTCCTTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCAGACCTGCCTGGCCGTGACTGGTTTGTACG
AGAGTTCTACAACAGCTCCTTGCCCGACTCGCAATGCCCAAAATGTAACC
AGCTTCTCTTTCGGTGCGTCGACAGGAAAGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAACGACTTTATAACGGCCCACGGTGCGATCCAAGCCTTGCAT
CACCCCTCCCTCCCACCGTCCCTCCCTCACTCCCTTTCTTCCACAGCGAG
TTTAATCAAGCCCTTACCGCCGTCATTCCTATGGCGCCACTCATGTACAT
CCGGTGGGCTCACTTGTGGAAAGAAGGAGGCGTCTACACCGACTTCTCGG
TCCTGTGGCACCGGCCGTTCCCTGCCGAGCGGTAGGGAGGGAGGGAGGAA
GGGAGGGAGGGAGGGAGGGAAGGGTGCCATGCCAGTGTCGGATGCACCTG
ATCCTCCCTTACTCTCGTCATTCTCATCTTCCCTCCCTCCCTCTGTTGCT
CCCACTCCCTCCCTTCCTCCTTCCCTTCCTCCCTCCTGCAGGTATTTTGA
CATGTCTCCTCCTGCCTGCTCTCCCTTTGACGTAAAGGCCAGGGAAAATT
ATCCATCGCGGCCCGAGCCAAGTGTCCTGGGACCTGAGCAAGTCACGCCG
GTGGAGAAGGTGAGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGGAAGTTGATAATGTGAGTGTATGCCCTGATTCTCAATCC
TCTCTCTCCCTATCACCGCGCCTCGTTTTCCCAGCGCCTTTAATATTCAG
TTATTGACCCTGAATACACTCACTCAATCAAATAATTGCACATTTCGTTC
ATCGATTTATTCACCAATTCGCGCATACCTCCCTTTCCAACCCCTCTCCT
CCTCCCTCATCACAGCGCCTGCTCTCTCTCCCCACGCGGCCTTCGTTCAG
TATCGATCTATCAATCAATCATTCTATCAATGACTCAATTAATTCATCCA
TCCAGTTATCCTCTAACCCCCCTTCTCCTCCCCCTCCTAATCACAGCGCT
TGGCTTTCCCCACGCCGCCCGCCGGGATGCTAGGCTCCATGCACATGCAC
TTCCACAAACACGACCGAGTCCTGGCCTGTAAGAAAAGGAGGGAGGGAGG
GAGGGAGGGAGGGAAGGAGGGCAGGAGAATGTAGCTGAGGCGATGTTTAT
TCCCGTTACGCGGCACCATCAACAGGCGCGATGATCGAGATCGGCACTCC
CAGATTCCGCAAATGCTTCAATGAAAGTACAGAGGTGAGATTCTTCTCTT
CCTCTCCCTCCCTTCCTCCCTCCTTCCCTCCGCCCCTCCGTCCGCCCCTT
CCTCCCTCCCTTCTTCCCTGTGTCTCCATCCAGTCTATCCCTCCCTCCCT
GCTTTTCCCTTCATTTCGTCTGTCCTTCCCTCCCTCCCTTCCCTCAGTAC
GGCCGCGACTGCGTTCAGACCATCATGCGCCTGTGCATCGCCCACGAGAA
CACCCAAGTGGGCGGGGGGGAGGAAGGGAAGGAGGAAAGCCCTCCACCTC
CTTCGGCGGAAGGCAGGAAGGATGCAGCCATGTCCTCCCTCCCTTCCTCC
CTTCCGCCTTCGAAACACTCTGTCCGGGAGGGAGGTGTGGTGGCATGGTT
CCAATGCAACGGCTCTGCTGGCGATGCTGCCCCTGCTGTCGAGAGGTGGA
GGGAAGATCCACAAGTGGTAAGGAAAGAGGGCGGGAGCGGGGGTCACTCC
TTACACTAAACATAAATAAAAATAAAATAAAAAAAAAATAAAAATAAAAT
AAAATAAAATAAAATAAATAAATAAATAAATAAATAAAACACCCCTCCGT
ATATTTATACATTTCCACATTCCCCTTACATTCCCCATCTTCCCTCCTTC
CTTTCCTCCCTCCCTCCCTCCCTCCCTAGGCCGGTTCCTCAGCCCTCTGG
CTTGGCCGATACGTTCGCATGGGGTTGGTTCTCTCTCCTCCCTCCTCTGT
CCGCTGGAGTGACTTCCCTCCCTCCCTCGATCCTTCCCTCCCTCCCTCCC
TTTACGCGCGCGCCACAGCCGAGAGCGTGCGGCTCTCGAAGTGGAACCCT
GCACAGACCTGCGAAGAGGGAGGAGGGAGAGAGGGAGGGAAGGAGGGAGT
ATGTGGCCACTCGGAGTTCATCGCAGGCACGAGAAATTGTGGACCGTCTT
TTTTCATTCCCGGGACTCAAAAGGGTGCGTCTTCCTTCTTATTCGATGCC
CTGACCAGACACCCGCAGGTGCTGCAGGTAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGCGATGTACGCAAG
GTCTAATGTCTGCTTTCTAAGTGTCGGAAACATACGTCATATATTGGTCC
TTCACTTTTTTCCCTCCCTCCTTTCCTCTCTCCCTCCTTCCTTTCCCGGT
CCTTTCCCGGAACACGGGCTTAATGTTAGGGAATCGAGCAAAACCTAATC
TCCCTCCCCCTCTCCCTCCCTCCCTCTCCCCCCCCGTCAGCCCACCATCA
GCTCTCAATATAAGGAGCCCGGGGTATACATGCACCTCGCGAAAGAAAAG
CGACTTCGTTACACATTCAGAAGCGACATATTCCCTTTTGTCGAAGCTGG
GGTAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGCAAGAGGGCGGGATG
AGAATTTACACCAACAAATAACGCTCCGTCCAACCGCCTTTTTTTGATTC
TGTCGAGAAACCTATACACCAGCAATCCTTCTGTCTCCTTTATTCATCTC
TCCCCCTCCCCCATCCCCCTTTCCCTCCCCCCCTCCCTCCCTCATGCTCT
CAGGAGCCCTTCCACTCGGGCGAAGCCACTGTCGCCTACATGTACCAGCC
CGGGAGTCCCCGCATGATAAAAAAAGACAATCCTCGTGCCAAATTTATTT
TTGCCTTGAGAGACCCTATTGCGAGGGCTTGGAGTGATTACCGCTTCAAC
TTTGATTGTAGGTCGTGGGTTAGGTGCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTCCTCCCTCCCTCCCTC
CCTAGCTTCTCCGGATGACCTTTCCTATTCACCGGGCTTCTCTCCCTCCC
TCTCTCCCTCCCTCACTTCCATTCCTTCATCTCCCCCATAGACTTCCAGA
AAAAGAACATGACATTCAAGGAAGTGGTGGAGAGAGGCATTACCGATTTC
GAAGTGAGAAATGAAGGAGGGAGGGAGGGAGGGAAGGATGGAGAGAGGGA
TGGACAGGACAGGATTGAAACGTAAATTTAAATCTTCATATATTTATGCT
CCCATATATACGCAGGACTGCTTTTCTTCCTCACCCGAGGGCCAGAAAAG
GAGGAATCAGAGTCGGATCGATGCGCTGAATCGATTACGTGCCAAGGAGG
AGGAGTTGGGGGTCTGGGAAGGGAAGGAGGTCGGGAGGGAAGACGACATC
CCTTTCCCTGATTTATTTTCGTGCCCGTGTTCGGATCCCCATCGGATTAT
TTTTAAGGGCCTGTACGTGTTTTCCTACGAGTACTACACCACATTCTTCC
CGGCCGAAAACCTGCACGTGGTCACTGCCGAACAGCTACGGGTAAGGGGC
GGGGGGCGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGGCGCGGACGGGCT
ATTGATATGGAAACCATGGTTGGAGTCGATGTCTCATCTCTCTTGCCGTC
TCTTCTTCATCTGTAGGAAAATCAAACCGAGACGCTGACGACGGCCACCT
CCTTCCTGGGCCTCTGTCCTTATGACTGGGGTCATGAAGACCTCTCCCCG
GTGCATGTCACTAAATCGAAAGCCCCGCTGACACAGGGTGAGGGGGGCCT
GGAAGGGGAGATCGAGGAGCGGTTGCGAGCTTTCTACTCTCCGTACAACC
GAAAGTTATATAAATTGTTGGGAAGGGACTTGGGGTGGGAGAAGTAG

Coding sequence (CDS) from alignment at chr10:1102952..1108098+

>NO10G03810.1 ID=NO10G03810.1|Name=NO10G03810.1|organism=Nannochloropsis oceanica|type=CDS|length=2640bp|location=Sequence derived from alignment at chr10:1102952..1108098+ (Nannochloropsis oceanica)
ATGCTTCGCTCCAATCGACCCACCCTCCCAACCCTCTTCTATGTGCTGGG
CGGCTTGTTTGGCTTCCTCCTGCTCTTGTCCTCCCGGAGGCTGCCAGTAG
AGCTCTCTAGCCAAGGCCTTGGACCTCACTTGAGGAACTTCCAGGAGCGG
GCGGGAGAACACGGGGGAAGGAGGGAGGATGGGGAGCTAGTGTGGACAAC
GGAGAAAAGCTTACGGCCGCATGAAACTAAAGAGGAAAGGAAGGACGGGG
ACCTTGAAAAGGAGAAGGGATCAGTAGAAGCGGGCAGTCATGTGAGCCAT
GGTGCGGCAGGGGCTCTTTCTGAGCAGGGTGGTAGCGCGAAGACGGACCA
CGAAAAGGCACCCAGGGAGGACGAGGACGAGGAGTCGGCAGCAGCAGCAG
CAACAGCAATACCTCGAGAAGAAAATGAGGGAGGGGAGGAGAAGCGGATC
AAGGTCTTCATGGACTTTCAGCAATCCCGAGCGAGTTGGGGCGTGGCGCA
TAATCGAGCCTTGGAGAGCGTACTCACGCAGCACCCTGAGGCAGAGATCG
TGGTTCTGGTGTCGGCACCAGACTTATACAAGAAGTACCATTACGCGGAT
GCATTGGGCAGACCATTCTTCCAGAAATATTTCAAGAGGGGCTATAACGT
TACCATCCAGCCCGTGAATGAAAACACTTTCCTCGCCGAGGGGATGGACG
AAGACCTGCCTGGCCGTGACTGGTTTGTACGAGAGTTCTACAACAGCTCC
TTGCCCGACTCGCAATGCCCAAAATGTAACCAGCTTCTCTTTCGCGAGTT
TAATCAAGCCCTTACCGCCGTCATTCCTATGGCGCCACTCATGTACATCC
GGTGGGCTCACTTGTGGAAAGAAGGAGGCGTCTACACCGACTTCTCGGTC
CTGTGGCACCGGCCGTTCCCTGCCGAGCGGTATTTTGACATGTCTCCTCC
TGCCTGCTCTCCCTTTGACGTAAAGGCCAGGGAAAATTATCCATCGCGGC
CCGAGCCAAGTGTCCTGGGACCTGAGCAAGTCACGCCGGTGGAGAAGCGC
TTGGCTTTCCCCACGCCGCCCGCCGGGATGCTAGGCTCCATGCACATGCA
CTTCCACAAACACGACCGAGTCCTGGCCTGCGCGATGATCGAGATCGGCA
CTCCCAGATTCCGCAAATGCTTCAATGAAAGTACAGAGTACGGCCGCGAC
TGCGTTCAGACCATCATGCGCCTGTGCATCGCCCACGAGAACACCCAAGT
GGGCGGGGGGGAGGAAGGGAAGGAGGAAAGCCCTCCACCTCCTTCGGCGG
AAGGCAGGAAGGATGCAGCCATGTCCTCCCTCCCTTCCTCCCTTCCGCCT
TCGAAACACTCTGTCCGGGAGGGAGGTGTGGTGGCATGGTTCCAATGCAA
CGGCTCTGCTGGCGATGCTGCCCCTGCTGTCGAGAGGTGGAGGGAAGATC
CACAAGTGGCCGGTTCCTCAGCCCTCTGGCTTGGCCGATACGTTCGCATG
GGGTTGGTTCTCTCTCCTCCCTCCTCTGTCCGCTGGAGTGACTTCCCTCC
CTCCCTCGATCCTTCCCTCCCTCCCTCCCTTTACGCGCGCGCCACAGCCG
AGAGCGTGCGGCTCTCGAAGTGGAACCCTGCACAGACCTGCGAAGAGGGA
GGAGGGAGAGAGGGAGGGAAGGAGGGAGTATGTGGCCACTCGGAGTTCAT
CGCAGGCACGAGAAATTGTGGACCGTCTTTTTTCATTCCCGGGACTCAAA
AGGGTGCGTCTTCCTTCTTATTCGATGCCCTGACCAGACACCCGCAGGTG
CTGCAGCCCACCATCAGCTCTCAATATAAGGAGCCCGGGGTATACATGCA
CCTCGCGAAAGAAAAGCGACTTCGTTACACATTCAGAAGCGACATATTCC
CTTTTGTCGAAGCTGGGGAGCCCTTCCACTCGGGCGAAGCCACTGTCGCC
TACATGTACCAGCCCGGGAGTCCCCGCATGATAAAAAAAGACAATCCTCG
TGCCAAATTTATTTTTGCCTTGAGAGACCCTATTGCGAGGGCTTGGAGTG
ATTACCGCTTCAACTTTGATTACTTCCAGAAAAAGAACATGACATTCAAG
GAAGTGGTGGAGAGAGGCATTACCGATTTCGAAGACTGCTTTTCTTCCTC
ACCCGAGGGCCAGAAAAGGAGGAATCAGAGTCGGATCGATGCGCTGAATC
GATTACGTGCCAAGGAGGAGGAGTTGGGGGTCTGGGAAGGGAAGGAGGTC
GGGAGGGAAGACGACATCCCTTTCCCTGATTTATTTTCGTGCCCGTGTTC
GGATCCCCATCGGATTATTTTTAAGGGCCTGTACGTGTTTTCCTACGAGT
ACTACACCACATTCTTCCCGGCCGAAAACCTGCACGTGGTCACTGCCGAA
CAGCTACGGGAAAATCAAACCGAGACGCTGACGACGGCCACCTCCTTCCT
GGGCCTCTGTCCTTATGACTGGGGTCATGAAGACCTCTCCCCGGTGCATG
TCACTAAATCGAAAGCCCCGCTGACACAGGGTGAGGGGGGCCTGGAAGGG
GAGATCGAGGAGCGGTTGCGAGCTTTCTACTCTCCGTACAACCGAAAGTT
ATATAAATTGTTGGGAAGGGACTTGGGGTGGGAGAAGTAG

Synonyms

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