NO10G03670.1, NO10G03670.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G03670.1
Unique Name	NO10G03670.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3289
Alignment location	chr10:1058126..1063362 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:1058126..1063362 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G03670.1 vs.
Match: EWM25563.1 (acid sphingomyelinase-like phosphodiesterase 3b [Nannochloropsis gaditana])

HSP 1 Score: 590.5 bits (1521), Expect = 6.600e-165
Identity = 300/463 (64.79%), Postives = 351/463 (75.81%), Query Frame = 0

Query:   12 SGNENGDSLPLTRADGH-RGSYQSIPTTTTPLAANNSASSSSSSIGHQQEHQHDDDNLPTVTYTRGTLNISAPSASSFSPSSIISPTSRLWRLTAGE-QRGFHLLQSGAVLAVAALCLGVGVLIGQSQSQVSLNSSYDINPFSHQQLQDAQAEWPAQPLLGNAWTPQDVQSVFTAYHFTDAHIEPLYDKDQVRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKAVDPDVSYVLFTGDMNAHHLCTEDLVRTTQEEFMRRVNRALPNVPFVYAIGNNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAGFYRLRDPAKNLRLLVLNSGLWSPRYDNADLPRSLPDDHMDWVEAELQAAKEGGEKVVMISHIPPGHVRHSEDWSERYLDRYITLCTRYVGTIAAQFYGHHSKEYIRSFSPEVGVLCSAGVTP 473
            SG E GD LPLT+  G   G Y ++    T L    S S   S++  Q      D N PT+T T   L       S FS +S +   S  WR   G  +R  HLL +  +L V A  LGVG  IGQS++ +S  S   +  F    L   +A+WP   LLGN W+P+DV+ +FTAYHFTDAHIEPLYDK  V KG CR PDCCKKG+N+CEAFTY+E ELPTLGCDPPVSLLEGVLEAM+AVDP+VSYVLFTGDMNAHHLC E+LVRTTQ EFMRRV+RALP++PFVYAIGNNDLWPN+KNSEHNFEALYQ+QLKHCPQCA+FQG +EE+ +NA  FR+ G+YR RD AK++R+LV+NSGLW+PRYDN+DLP +LPD HMDWVE EL+AAKEGGE+VV+ISHIPPGHVRHS DW+ER+LDRYI LCTR+ GTI AQ YGHHSKEYIRSFSPEVGVL SAGVTP
Sbjct:    9 SGGE-GDDLPLTQGAGTWEGGYSAVCEAETTLP---SISERVSTLEMQP-----DRNPPTITRTASNLRTGN---SFFSAASALP--SWPWRPAPGRRERQSHLLYASVLLVVGAFLLGVGFCIGQSRA-ISSRSEGSVKFFPPSGLGQVKADWPTHSLLGNTWSPRDVEPLFTAYHFTDAHIEPLYDKHVVVKGNCRKPDCCKKGENVCEAFTYDESELPTLGCDPPVSLLEGVLEAMQAVDPEVSYVLFTGDMNAHHLCNEELVRTTQNEFMRRVHRALPHLPFVYAIGNNDLWPNSKNSEHNFEALYQVQLKHCPQCAIFQGTEEEKAENARTFRAGGYYRFRDHAKHVRILVVNSGLWAPRYDNSDLPVALPDAHMDWVENELEAAKEGGEQVVLISHIPPGHVRHSADWNERFLDRYIALCTRFAGTITAQLYGHHSKEYIRSFSPEVGVLVSAGVTP 456

The following BLAST results are available for this feature:

BLAST of NO10G03670.1 vs.

BLAST of NO10G03670.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25563.1	6.600e-165	64.79	acid sphingomyelinase-like phosphodiesterase 3b [N...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G03670	NO10G03670	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03670.1	NO10G03670.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03670.1.cds1	NO10G03670.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03670.1.cds2	NO10G03670.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03670.1.cds3	NO10G03670.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03670.1.cds4	NO10G03670.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03670.1.cds5	NO10G03670.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03670.1.cds6	NO10G03670.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03670.1.cds7	NO10G03670.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03670.1.cds8	NO10G03670.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03670.1.cds9	NO10G03670.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:1058126..1063362+
coding sequence from alignment at chr10:1058126..1063362+

mRNA sequence

>NO10G03670.1 ID=NO10G03670.1|Name=NO10G03670.1|organism=Nannochloropsis oceanica|type=mRNA|length=3289bp
CAAAATATTACCCGGTTCATTCCTGGCATTCGACATCACCACGACGCACA
CACACACACGCGCACACAAACACACGCCGACGCCAATACAGAGGTGCCCG
ACATCACATAAACACAAGCATGGGCTGGTTAATCGCACGAGTACATTAAA
GTGAACTTGTGCTCCTTCTTGGCTTGACTGCGCTGCTTTGTCGATCCAAG
CTCGCTCCAGCAAACTGGGTGACGCGGTTTTTCCTTTCAGTGGTCAAGTC
ACCGAAAGTGAGGAAGGGTCTACGACATCTAAGGGCAGGAATTTTGTCTC
AAGACACCCGTGGAGACTGCTGGTGACTTTGCAAACACTTTCATTAAGTC
TTCGGAAGGACCCGGAATCCCCACGACCATTCCCTCATTCACGCCACATC
ACACCGCACCAACACAGCCACCGACCATGGTGCGTCGCAGTGGTAGCAGC
AGCGCCTTTTCTGGGAATGAAAACGGGGATTCCCTACCGCTAACACGTGC
CGATGGTCACCGTGGAAGCTATCAATCTATTCCCACGACCACTACCCCTC
TCGCAGCTAACAACAGTGCCAGCAGCAGCAGCAGCAGCATTGGGCATCAG
CAGGAGCACCAGCACGACGACGACAATCTGCCTACGGTGACCTACACCCG
AGGTACCCTGAATATCAGCGCTCCCTCTGCCTCTTCTTTCTCCCCTTCAT
CGATCATTTCCCCCACCTCCCGGCTCTGGCGTCTGACCGCGGGAGAACAA
CGTGGCTTCCACCTGCTGCAAAGCGGTGCTGTGTTGGCAGTGGCTGCATT
ATGTCTCGGTGTGGGTGTGCTGATCGGCCAATCGCAATCCCAAGTATCGC
TGAACAGCAGCTATGATATCAACCCTTTCTCCCACCAGCAGTTGCAGGAT
GCTCAGGCCGAGTGGCCTGCACAGCCCTTGCTTGGGAATGCATGGACTCC
TCAAGATGTCCAGTCGGTGTTCACGGCCTATCACTTCACCGATGCGCATA
TTGAACCGCTTTATGACAAGGACCAAGTCCGTAAGGGCACCTGCCGCAAC
CCCGACTGCTGTAAGAAGGGCAAAAACCTCTGCGAGGCCTTCACCTACAA
CGAGCTGGAGCTCCCTACCCTGGGCTGCGACCCTCCCGTCTCCCTCCTGG
AGGGAGTGTTGGAAGCCATGAAGGCTGTCGACCCGGACGTGTCCTACGTG
CTCTTTACAGGCGACATGAATGCCCACCATCTGTGCACCGAAGACCTGGT
CCGGACAACCCAAGAGGAATTCATGCGCCGCGTAAATCGGGCTCTGCCCA
ACGTCCCATTCGTTTACGCGATTGGCAACAACGACCTCTGGCCGAACAAC
AAGAATTCAGAGCATAATTTCGAGGCCCTTTATCAGCTTCAGCTTAAGCA
TTGTCCTCAGTGTGCGCTCTTTCAAGGTCCCAAAGAAGAAAGGGAAAAGA
ATGCCCTTCTCTTTCGTTCCGCGGGTTTTTATCGTCTCCGAGATCCAGCC
AAGAACCTACGCCTGTTGGTTCTTAACAGCGGGCTATGGTCCCCGCGGTA
CGACAACGCCGACTTGCCCCGCTCTTTGCCGGACGATCACATGGACTGGG
TTGAAGCCGAGCTGCAGGCCGCGAAGGAGGGAGGGGAGAAGGTCGTCATG
ATCTCCCACATCCCTCCCGGGCACGTCCGACATTCAGAGGATTGGAGTGA
GAGGTACCTCGACCGGTACATCACCCTCTGCACTCGGTATGTAGGCACGA
TTGCGGCCCAATTCTACGGGCATCATAGCAAGGAGTACATCCGCTCCTTC
TCGCCCGAGGTGGGCGTGTTGTGCTCCGCAGGTGTCACCCCCTCGGCGGA
GGCTCCTTGGCTTTCCCTGGAGAAAAAGATGCGGCGAATCCCACGTTCCG
CCATTTGGTATTCACTGAGAAAGGCCTTTACGACATGTGGTCATTTTACC
TGGACCTGTCGAGCGGCGAGAACGACCACCTGGCTGTCCCAGGGAAGAGG
TCCGGGGAGAAAGAGAAAGACAAGAAGAATTTGGCCGTCCTCCCGCGTGG
TGAAGACACAGGGGAGGAAGGGAAGGAGAGGGGGGTGTTTCTCCCCTCGT
CGAGTCGAAAGGACAAGGACCGGGCAGCGTTTGTGGCGTCGTTGGAAAGG
CGTGCAGGGACAGCGGGAGGGGTCTCGACCAAGTTTATCTCGGCCATTAA
GGCCGCGAATAGCAGGGGATGGGACCTCATGTACTCCTTCCGGGAGACCT
ACAAGTGTCCTGACGTTTCGCCTGCCTCCATCCACCTGGCTGCCCAGCGC
ATCGTCCGTGATTCCCACTACACTTCTCGGTATGAGATGTATCTGGGAGG
GTTGCACTCACCCTACCGACTCATCACCTGCGACGTGCATACCCGGACGT
GGGACTCCCAGGAGGTGGAGGAGTGCTTTGACAGCCTGTGTGTGTATGAC
GTGAGCCAGGAATGCTCCGACTTTGATGGGCGGAAGAAATACCGGCAGTT
GTTTTAGAGACCTGAGGCCTTTGTTCGAGACCTCGGTTTCCTCAGTGGGA
CGATAAGGAGAAGGGTGGTGATGAGAGGATCATAAAGACGAAGACAAGGA
TGAAAGGGACGGGAGGAAAAGGAGGAAAGAAAACGAATAAGAGAGTCTGA
TGGGTGAGAAATAAGAGGGGATGTCAAGTATGTATATGTAAAGAGAGAGA
CGGAGGGGAAATGAGATATGGAAATGGATGGAAGGCGTGCACGATACATT
TAACGAGGAACGAGGTAAGAAGCAGGGAAGCAGGGAAGATAGGAGGGAAA
TAGGGAAGGAAGGAAGGAGGACTGTGCAGTCAAACAACGATTGAAAATGG
GGTAGAAGAGGAAGGTGGAAGAAGGGAAATCTGAAGACGCTTGAAACTCT
GGTGGGGGATCTGCTACATTCGCGAGTCGAAGACAATTGTAATGCGCGAA
GAAGTTAGAGGCAGCAACGGAGGGAAATGAGAGAGCAAATTAGAGATCTC
TGCGAGATTATCTTCGACGTTTTGGGATGAACTGGGTTTTGGTTGATTCG
AAGGACTTATAAGGAGGTTTTACATGGTCATGATCGCACGAACATCACTG
GTAGGTCCAAAGCATTCATTTATCAACGTGCTCTCTATTTTTGCTGGTAC
ACGGTTATCTGACAAACAGACAGCCATTCATTCAAGGATCCCCAATGCCT
CCTGGGGACCCTGAACTATAGTGTAGACAAACAAAATACAAGCCATGCCA
AGCTTTAGTAAAAGAATGAAAACACACGTGCGTACGAAA

protein sequence of NO10G03670.1

>NO10G03670.1-protein ID=NO10G03670.1-protein|Name=NO10G03670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=676bp
MVRRSGSSSAFSGNENGDSLPLTRADGHRGSYQSIPTTTTPLAANNSASS
SSSSIGHQQEHQHDDDNLPTVTYTRGTLNISAPSASSFSPSSIISPTSRL
WRLTAGEQRGFHLLQSGAVLAVAALCLGVGVLIGQSQSQVSLNSSYDINP
FSHQQLQDAQAEWPAQPLLGNAWTPQDVQSVFTAYHFTDAHIEPLYDKDQ
VRKGTCRNPDCCKKGKNLCEAFTYNELELPTLGCDPPVSLLEGVLEAMKA
VDPDVSYVLFTGDMNAHHLCTEDLVRTTQEEFMRRVNRALPNVPFVYAIG
NNDLWPNNKNSEHNFEALYQLQLKHCPQCALFQGPKEEREKNALLFRSAG
FYRLRDPAKNLRLLVLNSGLWSPRYDNADLPRSLPDDHMDWVEAELQAAK
EGGEKVVMISHIPPGHVRHSEDWSERYLDRYITLCTRYVGTIAAQFYGHH
SKEYIRSFSPEVGVLCSAGVTPSAEAPWLSLEKKMRRIPRSAIWYSLRKA
FTTCGHFTWTCRAARTTTWLSQGRGPGRKRKTRRIWPSSRVVKTQGRKGR
RGGCFSPRRVERTRTGQRLWRRWKGVQGQREGSRPSLSRPLRPRIAGDGT
SCTPSGRPTSVLTFRLPPSTWLPSASSVIPTTLLGMRCIWEGCTHPTDSS
PATCIPGRGTPRRWRSALTACVCMT*

mRNA from alignment at chr10:1058126..1063362+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G03670.1 ID=NO10G03670.1|Name=NO10G03670.1|organism=Nannochloropsis oceanica|type=mRNA|length=5237bp|location=Sequence derived from alignment at chr10:1058126..1063362+ (Nannochloropsis oceanica)
CAAAATATTACCCGGTTCATTCCTGGCATTCGACATCACCACGACGCACA
CACACACACGCGCACACAAACACACGCCGACGCCAATACAGAGGTGCCCG
ACATCACATAAACACAAGCATGGGCTGGTTAATCGCACGAGTACATTAAA
GTGAACTTGTGCTCCTTCTTGGCTTGACTGCGCTGCTTTGTCGATCCAAG
CTCGCTCCAGCAAACTGGGTGACGCGGTTTTTCCTTTCAGTGGTCAAGTC
ACCGAAAGTGAGGAAGGGTCTACGACATCTAAGGGCAGGAATTTTGTCTC
AAGACACCCGTGGAGACTGCTGGTGACTTTGCAAACACTTTCATTAAGTC
TTCGGAAGGACCCGGAATCCCCACGACCATTCCCTCATTCACGCCACATC
ACACCGCACCAACACAGCCACCGACCATGGTGCGTCGCAGTGGTAGCAGC
AGCGCCTTTTCTGGGAATGAAAACGGGGATTCCCTACCGCTAACACGTGC
CGATGGTCACCGTGGAAGCTATCAATCTATTCCCACGACCACTACCCCTC
TCGCAGCTAACAACAGTGCCAGCAGCAGCAGCAGCAGCATTGGGCATCAG
CAGGAGCACCAGCACGACGACGACAATCTGCCTACGGTGACCTACACCCG
AGGTACCCTGAATATCAGCGCTCCCTCTGCCTCTTCTTTCTCCCCTTCAT
CGATCATTTCCCCCACCTCCCGGCTCTGGCGTCTGACCGCGGGAGAACAA
CGTGGCTTCCACCTGCTGCAAAGCGGTGCTGTGTTGGCAGTGGCTGCATT
ATGTCTCGGTGTGGGTGTGCTGATCGGCCAATCGCAATCCCAAGTATCGC
TGAACAGCAGCTATGATATCAACCCTTTCTCCCACCAGCAGTTGCAGGAT
GCTCAGGCCGAGTGGCCTGCACAGCCCTTGCTTGGGAATGCATGGACTCC
TCAAGATGTCCAGTCGGTGTTCACGGCCTATCACTTCACCGATGCGCATA
TTGAACCGCTTTATGGTGCGTTTATATATGTATGAACGAGGGGGGAACCG
TTGCTTCCAGCGGGAAGTTTCGCCTGGAGTTCTTTTTGGGTTTCACACCC
TTCCCTTTCATCTTTCCCCTTCCCTCTGTCACATGCATTTAAACGTGCCT
CCCTCCCTCCCTCCCACCCTATTTCCCCTCCTCCCTCCCTTCCTACCCCG
TTTAGACAAGGACCAAGTCCGTAAGGGCACCTGCCGCAACCCCGACTGCT
GTAAGAAGGGCAAAAACCTCTGCGAGGCCTTCACCTACAACGAGCTGGAG
CTCCCTACCCTGGGCTGCGACCCTCCCGTCTCCCTCCTGGAGGGAGTGTT
GGAAGCCATGAAGGCTGTCGACCCGGACGTGTCCTACGTGCTCTTTACAG
GCGACATGAATGCCCACCGTAAGTCCCGCCCTCCCTCCCCCTTTCCTTCT
TCCCCAACCCCCTCGAAAACACAAGCCATCATCCTCTTCTTCTCTCTCCT
TCCCTCCTCCTCTCGCTATTATCATCCTCTCCTTCCTCCCCTCCCTCCAC
CCTTCCCTCTCAACTTCTTAGATCTGTGCACCGAAGACCTGGTCCGGACA
ACCCAAGAGGAATTCATGCGCCGCGTAAATCGGGCTCTGCCCAACGTCCC
ATTCGTTTACGCGATTGGCAACGTAAGGCCCTCCCTCCCTCCCTCCCGTA
TTTCCCCCCTCAGTGTATCGAGGCAACCGAGCTCTACCCAACATCCCCTT
TTCCTTGGAGCCTTCCCTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCT
CTAGCCCCCCTCAATTCCTCACGCCCATTTGCATGCATTATCCATCACCC
TTACACGATCGCTCGCTTCTCTCAATTCCTCCCTCCCTCCCTCTCTCCCT
CCCTCCCCTTTCCCTCAGAACGACCTCTGGCCGAACAACAAGAATTCAGA
GCATAATTTCGAGGCCCTTTATCAGCTTCAGCTTAAGCATTGTCCTCAGT
GTGCGCTCTTTCAAGGTAAAAAAAGAAGGGAAGAAGGGATGGAGAGAGAG
AGTGATGGATAAGAGGAAAGGCTATCTGTGGATCCATTTAATTGAAATCC
ACCGCCTTTTCTTACCTTCGCACCTTCCCTCCCGCCCTCCCAACCTCCCT
CCCGCCCTTATTCCTTTCCCAGGTCCCAAAGAAGAAAGGGAAAAGAATGC
CCTTCTCTTTCGTTCCGCGGGTTTTTATCGTCTCCGAGATCCAGCCAAGA
ACCTACGCCTGTTGGTTCTTAACAGCGGGCTATGGTCCCCGCGGTACGAC
AACGCCGACTTGCCCCGCTCTTTGCCGGACGATCACATGGTATGTGCGTG
ATGGTTGGTCGGTTGCTGGGTCTCTGGTTTATTCGTTTGTGCTTGATTTT
GCGTTGTTTGCTTGGATTGTGCGTGGTTTTTCGTGGTTTGCTTTCCCTTT
TCTCCTTCCTTCTTGCCATTTATTTCGTGCGCCCCGAGGGTGTGCGGGGG
CTGCTGCAAGATGAGTGTCAATACGGGCCTCGCTCACTCTTTTCCAAAGG
AAGCGCACATGGCATCTGGCATTATCGACCTTGCCTTGTATGTCGTCGTG
TCTGGACGAGAAACACCCGTTTCTTTCCCTCTGTCTTTTCGTTTCAGGCA
TCCGGTACCTTTCGTATCTTTCCTCGAGCTGTCGCAGGCTCTCCCTTTTT
CTCCGTCTTCTTTTCGGCCTTTCACTCCTCTTCCTTCCGCTACCGCTGCT
GCTGCTGCCGCTGCTTCATACTCTTTTTGGTCTTAATGCCCGCGCACCTC
ATCCTTTTTCTTCCCTTCCCTCCTCCCTTTCTACCTCCTCTCTCTCCAGG
ACTGGGTTGAAGCCGAGCTGCAGGCCGCGAAGGAGGGAGGGGAGAAGGTC
GTCATGATCTCCCACATCCCTCCCGGGCACGTCCGACATTCAGAGGATTG
GAGTGAGAGGTACCTCGACCGGTACATCACCCTCTGCACGTAAGGAGGGA
GGGAAGGAGGGAGTGATGGAGGGAGATAGGGCGGGCGGGCGGGAGGAGGG
TTGGGGTTGGCCTCGTGGACATGCCGTTCGTATTTCACTTTCATACCGTT
ACCCAGGCTCCTTACACCTTGCCCTGCCTCCCTTTCTCCCTCCCCCCCTC
CCTTCCTCCCTTCCTTCCTCTCTCCCCCTCAGTCGGTATGTAGGCACGAT
TGCGGCCCAATTCTACGGGCATCATAGCAAGGAGTACATCCGCTCCTTCT
CGCCCGAGGTGGGCGTGTTGTGCTCCGCAGGTGTCACCCCCTCGGCGGAG
GCTCCTTGGCTTTCCCTGGAGAAAAAGATGCGGCGAATCCCACGTTCCGC
CATTTGGTATTCACTGAGAAAGGTATAGTGGCTGGGCTTTGGCGCCGGTG
CCCTCCCTTCCTCCCTCCCATTCTGCCTCTCTCTTTCACACATATCCTTC
CTACTTCCTGGTGGAGGTGTTTACGGGAGAGGATATGTACATTCCTACCA
ACAAATATAAACTTGTATGTGCGTTTTACAAGAGGCGGTATCAACGTCGG
GTTGCGCGTTTCCCCATCGCTCGCTCCTCATACGCATGTCCCTCCTTCCT
TCCCTCCCCCTCCCTCCTTCCCTCCCTCCTTCCTCCCTCCTTCCCTCCCT
AGGCCTTTACGACATGTGGTCATTTTACCTGGACCTGTCGAGCGGCGAGA
ACGACCACCTGGCTGTCCCAGGGAAGAGGTCCGGGGAGAAAGAGAAAGAC
AAGAAGAATTTGGCCGTCCTCCCGCGTGGTGAAGACACAGGGGAGGAAGG
GAAGGAGAGGGGGGTGTTTCTCCCCTCGTCGAGTCGAAAGGACAAGGACC
GGGCAGCGTTTGTGGCGTCGTTGGAAAGGCGTGCAGGGACAGCGGGAGGG
GTCTCGACCAAGTTTATCTCGGCCATTAAGGCCGCGAATAGCAGGGGATG
GGTGCGTTGCTGGAGAATGAGAGAGAAAGAGAGGAAGGGAGGGAGGGAAA
GAGGGAGGCAGATTGGGACGAAATATCAGAAAAACGCAGAAGCTTTTCGA
AAGATCGTTTCATCCACGGTTCTCAAAGAGTTCAATTTTTTATGTACCCG
TGACTTACCATACCCGTCCCTCCGCCCCTCCCTCCCCTCTTCTCTCCCTT
CCACCCTCCCCTTGGAACAGGACCTCATGTACTCCTTCCGGGAGACCTAC
AAGTGTCCTGACGTTTCGCCTGCCTCCATCCACCTGGCTGCCCAGCGCAT
CGTCCGTGATTCCCACTACACTTCTCGGTATGAGATGTATCTGGGAGGGT
TGCACTCACCCTACCGACTCATCACCTGCGACGTGCATACCCGGACGTGG
GACTCCCAGGAGGTGGAGGAGTGCTTTGACAGCCTGTGTGTGTATGACGT
GAGCCAGGAATGCTCCGACTTTGATGGGCGGAAGAAATACCGGCAGTTGT
TTTAGAGACCTGAGGCCTTTGTTCGAGACCTCGGTTTCCTCAGTGGGACG
ATAAGGAGAAGGGTGGTGATGAGAGGATCATAAAGACGAAGACAAGGATG
AAAGGGACGGGAGGAAAAGGAGGAAAGAAAACGAATAAGAGAGTCTGATG
GGTGAGAAATAAGAGGGGATGTCAAGTATGTATATGTAAAGAGAGAGACG
GAGGGGAAATGAGATATGGAAATGGATGGAAGGCGTGCACGATACATTTA
ACGAGGAACGAGGTAAGAAGCAGGGAAGCAGGGAAGATAGGAGGGAAATA
GGGAAGGAAGGAAGGAGGACTGTGCAGTCAAACAACGATTGAAAATGGGG
TAGAAGAGGAAGGTGGAAGAAGGGAAATCTGAAGACGCTTGAAACTCTGG
TGGGGGATCTGCTACATTCGCGAGTCGAAGACAATTGTAATGCGCGAAGA
AGTTAGAGGCAGCAACGGAGGGAAATGAGAGAGCAAATTAGAGATCTCTG
CGAGATTATCTTCGACGTTTTGGGATGAACTGGGTTTTGGTTGATTCGAA
GGACTTATAAGGAGGTTTTACATGGTCATGATCGCACGAACATCACTGGT
AGGTCCAAAGCATTCATTTATCAACGTGCTCTCTATTTTTGCTGGTACAC
GGTTATCTGACAAACAGACAGCCATTCATTCAAGGATCCCCAATGCCTCC
TGGGGACCCTGAACTATAGTGTAGACAAACAAAATACAAGCCATGCCAAG
CTTTAGTAAAAGAATGAAAACACACGTGCGTACGAAA

Coding sequence (CDS) from alignment at chr10:1058126..1063362+

>NO10G03670.1 ID=NO10G03670.1|Name=NO10G03670.1|organism=Nannochloropsis oceanica|type=CDS|length=2028bp|location=Sequence derived from alignment at chr10:1058126..1063362+ (Nannochloropsis oceanica)
ATGGTGCGTCGCAGTGGTAGCAGCAGCGCCTTTTCTGGGAATGAAAACGG
GGATTCCCTACCGCTAACACGTGCCGATGGTCACCGTGGAAGCTATCAAT
CTATTCCCACGACCACTACCCCTCTCGCAGCTAACAACAGTGCCAGCAGC
AGCAGCAGCAGCATTGGGCATCAGCAGGAGCACCAGCACGACGACGACAA
TCTGCCTACGGTGACCTACACCCGAGGTACCCTGAATATCAGCGCTCCCT
CTGCCTCTTCTTTCTCCCCTTCATCGATCATTTCCCCCACCTCCCGGCTC
TGGCGTCTGACCGCGGGAGAACAACGTGGCTTCCACCTGCTGCAAAGCGG
TGCTGTGTTGGCAGTGGCTGCATTATGTCTCGGTGTGGGTGTGCTGATCG
GCCAATCGCAATCCCAAGTATCGCTGAACAGCAGCTATGATATCAACCCT
TTCTCCCACCAGCAGTTGCAGGATGCTCAGGCCGAGTGGCCTGCACAGCC
CTTGCTTGGGAATGCATGGACTCCTCAAGATGTCCAGTCGGTGTTCACGG
CCTATCACTTCACCGATGCGCATATTGAACCGCTTTATGACAAGGACCAA
GTCCGTAAGGGCACCTGCCGCAACCCCGACTGCTGTAAGAAGGGCAAAAA
CCTCTGCGAGGCCTTCACCTACAACGAGCTGGAGCTCCCTACCCTGGGCT
GCGACCCTCCCGTCTCCCTCCTGGAGGGAGTGTTGGAAGCCATGAAGGCT
GTCGACCCGGACGTGTCCTACGTGCTCTTTACAGGCGACATGAATGCCCA
CCATCTGTGCACCGAAGACCTGGTCCGGACAACCCAAGAGGAATTCATGC
GCCGCGTAAATCGGGCTCTGCCCAACGTCCCATTCGTTTACGCGATTGGC
AACAACGACCTCTGGCCGAACAACAAGAATTCAGAGCATAATTTCGAGGC
CCTTTATCAGCTTCAGCTTAAGCATTGTCCTCAGTGTGCGCTCTTTCAAG
GTCCCAAAGAAGAAAGGGAAAAGAATGCCCTTCTCTTTCGTTCCGCGGGT
TTTTATCGTCTCCGAGATCCAGCCAAGAACCTACGCCTGTTGGTTCTTAA
CAGCGGGCTATGGTCCCCGCGGTACGACAACGCCGACTTGCCCCGCTCTT
TGCCGGACGATCACATGGACTGGGTTGAAGCCGAGCTGCAGGCCGCGAAG
GAGGGAGGGGAGAAGGTCGTCATGATCTCCCACATCCCTCCCGGGCACGT
CCGACATTCAGAGGATTGGAGTGAGAGGTACCTCGACCGGTACATCACCC
TCTGCACTCGGTATGTAGGCACGATTGCGGCCCAATTCTACGGGCATCAT
AGCAAGGAGTACATCCGCTCCTTCTCGCCCGAGGTGGGCGTGTTGTGCTC
CGCAGGTGTCACCCCCTCGGCGGAGGCTCCTTGGCTTTCCCTGGAGAAAA
AGATGCGGCGAATCCCACGTTCCGCCATTTGGTATTCACTGAGAAAGGCC
TTTACGACATGTGGTCATTTTACCTGGACCTGTCGAGCGGCGAGAACGAC
CACCTGGCTGTCCCAGGGAAGAGGTCCGGGGAGAAAGAGAAAGACAAGAA
GAATTTGGCCGTCCTCCCGCGTGGTGAAGACACAGGGGAGGAAGGGAAGG
AGAGGGGGGTGTTTCTCCCCTCGTCGAGTCGAAAGGACAAGGACCGGGCA
GCGTTTGTGGCGTCGTTGGAAAGGCGTGCAGGGACAGCGGGAGGGGTCTC
GACCAAGTTTATCTCGGCCATTAAGGCCGCGAATAGCAGGGGATGGGACC
TCATGTACTCCTTCCGGGAGACCTACAAGTGTCCTGACGTTTCGCCTGCC
TCCATCCACCTGGCTGCCCAGCGCATCGTCCGTGATTCCCACTACACTTC
TCGGTATGAGATGTATCTGGGAGGGTTGCACTCACCCTACCGACTCATCA
CCTGCGACGTGCATACCCGGACGTGGGACTCCCAGGAGGTGGAGGAGTGC
TTTGACAGCCTGTGTGTGTATGACGTGA

Synonyms

Publications