NO10G03560.1, NO10G03560.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G03560.1
Unique Name	NO10G03560.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3228
Alignment location	chr10:1010687..1015236 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:1010687..1015236 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G03560.1 vs.
Match: XP_005854415.1 (hypothetical protein NGA_0231400, partial [Nannochloropsis gaditana CCMP526]; EKU21941.1 hypothetical protein NGA_0231400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 818.9 bits (2114), Expect = 1.800e-233
Identity = 452/789 (57.29%), Postives = 566/789 (71.74%), Query Frame = 0

Query:    9 ESRRRRRRVLLGSLGAVCLIVGAALAITFAGKGQGKNKPEPAATVEGNL-SPMGDLPGLVKDSVLSTNAGTTGAAPKSVGTTVTPAVPTASKAAPAEGTGDLTFQNFLETGTVGGVGLGAALGALPGASTVNGAFNGLASNLANLAGLRVCSPVDGPDLERMVAGSSTCGVILLTKGSMVPYFTENTMVVSTRKIIVGHPIDLPQIRTVGKLERVFDVVSGGSLDIRFVSVFKAYGRAPSEDLRIVAGGVALVRLGGFFRGTAVIFREPTQTFKAFQGALERPYQRRRKYGGHVLVLGGSFFCYGCQIIRWNPYGGILLNVFQLGRDFLVVAGTSVMTGVYHLAFTPFGSAVSVGNAIAVLGGVSVRIGGGTEGVAILKGQFGAGQNIFVGGGVLVNVGHQQQTAFVCLVRAGYGMTAMGAGVFVLIAELENRAWGVASIFGAGQVYSNGAGVMDKTGGEVVNSAISAFQALAGGSAYLGAGDMNIVGEQFARLALTLDQNGVGMTFFNGAGHGTMIYVPSLVICLVRSQKILGAEVFQGAGFHTEVNNTRWTIQLVNAQMPGYEGWIGLGASLMIRSRTTVRRLVNYRAAKKVAWVVNGVGVNESLRSNFNIFTDKNGTTVLKPHAKNGKHRLLEAVDELV----SSAASTSNRRALIKGF-SRPALSMADSVMDSKKVQPPNPGILAEKLQALVSGLKNKRRLKGQAAVNPTRIMNMFQGLSPASLMKAWQEAVDETNNNNALG-SNTNDRALAAGNDADEVDADGRWGEQVPRHHGEAQRSLAGWG 791
            ++ RRRRRVLL SLGA+CLIV  ALAI F  KG+  +K   + +  GN   P  ++   + D+  +       +AP ++   V   V  +  +APA  T        L  G      LG   GALPGA+ +NGAFN LA++ ANLAGL+VC P +G +L+ M    S+C VI+L KGS   Y   +T++V++RKI++GHPIDLPQI     + R+F+V  GGSLDIRFVS+F+   R   ++L ++  GVALV LGG+ RGTA IFR+P QTF+ F  +LE P+ R+R  GG VLVLGG+FFCYGCQ +RW PYG   +NV Q+GRD+LV+AG++V  G YH+A++P+GSA+SVGNA+ V GGV++RIGGGT G ++LKGQFGAGQNIFVGGGV+VNVGHQQQTAFVCL+RAGY MTA+G+GV VLIAELENRAWGVA+I GAGQVY+NGAGV+DKTGGEVVN A S +QA+ GGS+YLG GDMNIVGEQ+AR+ +TLDQNGVG+TFFNGAG  ++IYVPS V  +VRSQKILGAE F GAGF T VNNTRWTIQ+VNA +PGYEGWIGLGA+L +RSRTTVRR+VN+R     AWVVNG GV  S     NIF +K+G  + KP+    K RLL AVDE+V     S  +T    A IK F  RPA+ MA+S MDS +++PP+P ILA K+ ++V+ LK+KRRL+GQA VNPTR+MNM  GLSPA LM+AW+EA +ETN N  L     N RALA   D   VD +GRW EQV     E Q  + G G
Sbjct:   14 QAPRRRRRVLLISLGALCLIVVGALAIGFGIKGKDNDK---SISTHGNKHGPATEVVSSMADTKNTIVPSAPESAPATIVEPVKAPVSESKPSAPATTTKVDDSDKILTFGDGERNPLGPLFGALPGAAAINGAFNTLAASAANLAGLQVCYPQNGEELKGMTESGSSCSVIILKKGSSDKYTLPSTVIVTSRKIVLGHPIDLPQIHPDNGVYRLFEVKPGGSLDIRFVSLFRPSPRKVDDNLSVIVAGVALVELGGYMRGTACIFRQPAQTFEGFVKSLETPFARKRIVGGFVLVLGGTFFCYGCQAVRWAPYGSPNVNVVQIGRDYLVMAGSNVCIGCYHVAYSPYGSAISVGNAMGVFGGVNIRIGGGTIGSSVLKGQFGAGQNIFVGGGVIVNVGHQQQTAFVCLIRAGYAMTAVGSGVMVLIAELENRAWGVAAINGAGQVYANGAGVLDKTGGEVVNCASSVYQAIVGGSSYLGTGDMNIVGEQYARVTVTLDQNGVGLTFFNGAGQTSLIYVPSFVSAVVRSQKILGAEAFLGAGFFTNVNNTRWTIQVVNAGIPGYEGWIGLGAALFVRSRTTVRRVVNFR-FNPYAWVVNGQGVPGSAYRENNIFVNKDGIRINKPNP--SKSRLLAAVDEMVDGHLKSKRNTQGLLAGIKNFVDRPAVVMANSEMDSARMRPPDPQILAGKILSMVTSLKHKRRLQGQAVVNPTRMMNMLAGLSPAKLMEAWKEATEETNRNPLLSLVQGNSRALAETADPTAVDENGRWAEQVYVGGKETQCVMCGVG 796

The following BLAST results are available for this feature:

BLAST of NO10G03560.1 vs.

BLAST of NO10G03560.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005854415.1	1.800e-233	57.29	hypothetical protein NGA_0231400, partial [Nannoch...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G03560	NO10G03560	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03560.1	NO10G03560.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03560.1.cds1	NO10G03560.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03560.1.cds2	NO10G03560.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03560.1.cds3	NO10G03560.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03560.1.cds4	NO10G03560.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03560.1.cds5	NO10G03560.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03560.1.cds6	NO10G03560.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:1010687..1015236-
coding sequence from alignment at chr10:1010687..1015236-

mRNA sequence

>NO10G03560.1 ID=NO10G03560.1|Name=NO10G03560.1|organism=Nannochloropsis oceanica|type=mRNA|length=3228bp
ATGAACGAGGCCGGGCCCCAAGAGGAGTCCCGACGCCGTCGCCGGCGTGT
TCTACTGGGCTCGCTGGGTGCAGTGTGTCTGATCGTCGGTGCCGCGTTGG
CCATAACCTTTGCTGGAAAGGGCCAGGGCAAGAATAAGCCGGAGCCGGCG
GCCACTGTAGAGGGGAATTTGTCTCCGATGGGAGACCTTCCAGGCCTTGT
GAAGGATTCAGTGCTGTCAACCAACGCGGGCACCACCGGTGCCGCTCCGA
AATCCGTAGGTACGACGGTGACGCCCGCTGTCCCCACAGCATCGAAGGCA
GCGCCTGCTGAGGGTACTGGCGACCTCACGTTTCAGAACTTCCTCGAAAC
CGGCACGGTGGGAGGCGTTGGCCTCGGCGCGGCACTGGGTGCTTTGCCCG
GGGCCTCGACCGTGAATGGAGCCTTCAACGGCTTGGCGAGTAATTTGGCC
AACCTGGCAGGCCTTCGTGTCTGCTCTCCCGTGGATGGTCCTGATCTGGA
GCGAATGGTGGCGGGCTCGAGCACTTGCGGCGTCATTCTCCTGACGAAGG
GCTCTATGGTCCCATACTTCACGGAGAACACGATGGTTGTGTCAACCCGC
AAGATTATCGTGGGCCACCCTATTGACCTTCCTCAAATTAGGACGGTAGG
GAAACTAGAGCGGGTCTTTGACGTGGTGTCGGGGGGCTCCTTGGACATTC
GTTTCGTGAGCGTCTTCAAAGCATACGGCCGAGCACCCTCAGAGGACCTC
CGTATCGTCGCCGGGGGTGTTGCGTTGGTGCGCTTGGGAGGCTTCTTCCG
CGGTACGGCCGTGATTTTCCGCGAGCCTACTCAGACTTTCAAAGCCTTTC
AAGGCGCGCTGGAGCGCCCCTATCAGCGTCGCCGCAAGTATGGCGGGCAC
GTCCTGGTCTTGGGAGGCTCCTTCTTTTGTTACGGATGTCAGATAATCCG
GTGGAACCCTTATGGCGGGATTCTTTTGAACGTTTTCCAGCTTGGTCGTG
ATTTCTTGGTTGTTGCCGGGACGAGCGTCATGACTGGCGTCTATCATTTG
GCCTTCACACCTTTCGGAAGCGCAGTCAGCGTTGGAAATGCTATCGCTGT
CCTGGGCGGCGTCAGTGTTCGCATTGGCGGCGGAACAGAGGGGGTTGCGA
TTCTCAAGGGACAATTTGGTGCCGGCCAGAATATATTCGTGGGCGGTGGG
GTGCTCGTGAATGTGGGCCATCAGCAGCAGACCGCCTTTGTGTGCCTTGT
GCGTGCGGGCTACGGCATGACTGCTATGGGTGCTGGGGTGTTTGTACTTA
TTGCGGAGCTTGAGAACCGTGCGTGGGGTGTGGCTTCCATCTTCGGTGCC
GGGCAGGTGTACTCCAACGGCGCGGGCGTTATGGACAAGACTGGTGGAGA
GGTCGTCAACAGTGCTATTTCGGCCTTCCAAGCCCTGGCCGGCGGGTCCG
CCTATTTGGGCGCGGGTGACATGAACATTGTGGGCGAACAGTTTGCGCGA
CTTGCTTTAACCCTGGACCAGAATGGCGTTGGCATGACTTTCTTTAACGG
GGCTGGGCACGGAACTATGATCTACGTCCCCAGTTTGGTGATTTGCCTCG
TCCGTTCTCAGAAGATTCTCGGTGCCGAGGTCTTCCAAGGAGCCGGGTTT
CACACAGAAGTCAACAATACACGCTGGACAATTCAATTGGTGAATGCGCA
AATGCCGGGTTATGAAGGCTGGATCGGGCTGGGTGCCTCTCTGATGATCC
GGTCGCGGACCACTGTCAGGCGTCTGGTGAACTACCGCGCTGCCAAGAAA
GTGGCTTGGGTGGTGAATGGGGTCGGTGTCAACGAATCGCTGAGGAGCAA
CTTCAACATTTTTACCGACAAGAACGGCACGACAGTCCTGAAGCCGCACG
CTAAAAATGGCAAGCACCGACTCCTGGAAGCTGTGGATGAACTTGTGAGC
AGTGCTGCCAGCACATCCAACAGGCGGGCCCTTATTAAAGGTTTTAGTCG
TCCTGCTTTGAGCATGGCCGACAGTGTGATGGACTCGAAGAAGGTTCAGC
CTCCTAACCCCGGGATTCTGGCCGAAAAACTGCAGGCCCTGGTGTCGGGT
TTGAAGAATAAACGCCGTCTCAAAGGGCAAGCCGCGGTCAACCCCACCCG
TATCATGAACATGTTCCAAGGCCTGTCGCCAGCCTCGCTCATGAAAGCTT
GGCAAGAGGCCGTGGACGAGACTAACAACAACAATGCTCTCGGTAGCAAC
ACCAACGATCGTGCCTTGGCTGCAGGAAACGATGCCGACGAGGTGGACGC
CGACGGCCGGTGGGGCGAACAGGTTCCAAGGCATCATGGGGAAGCTCAGA
GGAGCCTTGCCGGATGGGGAAGACTTAGTATTGTCGCCCGCGGCGAAGGC
TGGGCCAAGACGGTGGGCTCCAAGTACACGGCGCGTCTCTTGCAAGATAT
CGACGATCACCAGGCGGAGAATCCCGGGGCGGATATCAAGCTGCCGGACA
CGAACATTTTGACCTACGACATTTTCCTGTACTGCCCCGTGGCCGATGCG
GAGTGTGAGTATAGCCAGGCAAACATGAAGGCGGCATTCCAAGACTATCT
CGACGATGTGGCGCAGGAGGAGACTGCGTTCAAGATTTCGTCGGCGACTG
CAGCGGTGCATCCGGCTATCTCTAAAATTGTGAATGATGCTGACGGAGAC
TTTGTGTCGGCCATTGGGGCGCCGGCGCTAGAGGGGTGTGGGAAGGGCCT
CTCGTTTTCTCTTTTCGTGACGGCGCCCGACAAATCTTCGGTGACGGATG
TGAAGACTATCCTGGAAAAAGCAGGTACCGACAGTGATGAACTTCTGGCC
TTCATCAACGACCAAGGGGAGCAGGAAGCATCCTTCTGCAGCGTGAGCGT
GACGAAGCGCTCAGCAATGTTTTTCCCGTCCGTGGACACGGCGGCAGGGA
AGAGCTTCTATCAGAAGCTTTACACGGGCAACGCGCTGGATTCCGGGAGC
CTCTGGCCCGACATCACGGTGGTGTCGGCGCACGAGGTGGCCCCCGTTCA
GCACGCAGTGGCGGATCAGTCCTACACACTTTTGTTGGAGGGCTTTGCCA
TGAAGGCGGAAGTGGTGGTGGAGCTGTTCCAGGGCACGCAGAGCAGCGGG
TGGAGGTGGCCAGGGTCCCTGGTGGCATGGGCATCGGCGAGACACGCGAG
GTGGCTTGGACGGCTCCTGCGCCCATGA

protein sequence of NO10G03560.1

>NO10G03560.1-protein ID=NO10G03560.1-protein|Name=NO10G03560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1076bp
MNEAGPQEESRRRRRRVLLGSLGAVCLIVGAALAITFAGKGQGKNKPEPA
ATVEGNLSPMGDLPGLVKDSVLSTNAGTTGAAPKSVGTTVTPAVPTASKA
APAEGTGDLTFQNFLETGTVGGVGLGAALGALPGASTVNGAFNGLASNLA
NLAGLRVCSPVDGPDLERMVAGSSTCGVILLTKGSMVPYFTENTMVVSTR
KIIVGHPIDLPQIRTVGKLERVFDVVSGGSLDIRFVSVFKAYGRAPSEDL
RIVAGGVALVRLGGFFRGTAVIFREPTQTFKAFQGALERPYQRRRKYGGH
VLVLGGSFFCYGCQIIRWNPYGGILLNVFQLGRDFLVVAGTSVMTGVYHL
AFTPFGSAVSVGNAIAVLGGVSVRIGGGTEGVAILKGQFGAGQNIFVGGG
VLVNVGHQQQTAFVCLVRAGYGMTAMGAGVFVLIAELENRAWGVASIFGA
GQVYSNGAGVMDKTGGEVVNSAISAFQALAGGSAYLGAGDMNIVGEQFAR
LALTLDQNGVGMTFFNGAGHGTMIYVPSLVICLVRSQKILGAEVFQGAGF
HTEVNNTRWTIQLVNAQMPGYEGWIGLGASLMIRSRTTVRRLVNYRAAKK
VAWVVNGVGVNESLRSNFNIFTDKNGTTVLKPHAKNGKHRLLEAVDELVS
SAASTSNRRALIKGFSRPALSMADSVMDSKKVQPPNPGILAEKLQALVSG
LKNKRRLKGQAAVNPTRIMNMFQGLSPASLMKAWQEAVDETNNNNALGSN
TNDRALAAGNDADEVDADGRWGEQVPRHHGEAQRSLAGWGRLSIVARGEG
WAKTVGSKYTARLLQDIDDHQAENPGADIKLPDTNILTYDIFLYCPVADA
ECEYSQANMKAAFQDYLDDVAQEETAFKISSATAAVHPAISKIVNDADGD
FVSAIGAPALEGCGKGLSFSLFVTAPDKSSVTDVKTILEKAGTDSDELLA
FINDQGEQEASFCSVSVTKRSAMFFPSVDTAAGKSFYQKLYTGNALDSGS
LWPDITVVSAHEVAPVQHAVADQSYTLLLEGFAMKAEVVVELFQGTQSSG
WRWPGSLVAWASARHARWLGRLLRP*

mRNA from alignment at chr10:1010687..1015236-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G03560.1 ID=NO10G03560.1|Name=NO10G03560.1|organism=Nannochloropsis oceanica|type=mRNA|length=4550bp|location=Sequence derived from alignment at chr10:1010687..1015236- (Nannochloropsis oceanica)
ATGAACGAGGCCGGGCCCCAAGAGGAGTCCCGACGCCGTCGCCGGCGTGT
TCTACTGGGCTCGCTGGGTGCAGTGTGTCTGATCGTCGGTGCCGCGTTGG
CCATAACCTTTGCTGGAAAGGGCCAGGGCAAGAATAAGCCGGAGCCGGCG
GCCACTGTAGAGGGGAATTTGTCTCCGATGGGAGACCTTCCAGGCCTTGT
GAAGGATTCAGGTGAGAAAACATAAGGGGAGGACGGCAGGAAATGGAGGG
TGCACACCCTGTGCGCAGAACTGACCCCCTGAGTTGACCTCTTGGAGCTC
TAGTGGTGGTAGTGCTGGTGGTGCTGCCCGCACTATCTGAATGTGTACAA
TGTCGAGCCCCCTCATTGAATGTATCTTCTTATGCCTTCGACGAACGTAT
CTTGTGTCCCTGCCATTCTCTTCTTGGCCGCTTTAATCGCATCAAGGGGC
AGCTCCGACACCTCCGGTGCACCGATTCTTTGCCGGCTTTGCTTCCCTAA
CTCGCTCCTTTTGCCCTCTCCTTTTCCCCCTCTTGCACCGCTCTGATGAT
CAGCAGCATTACCCCTTACCATAACGATTCAATCGTTTCTCTGACACATC
TCCGTTTCCCACCTCCCTCTCTCCTGCGCTACAGTGCTGTCAACCAACGC
GGGCACCACCGGTGCCGCTCCGAAATCCGTAGGTACGACGGTGACGCCCG
CTGTCCCCACAGCATCGAAGGCAGCGCCTGCTGAGGGTACTGGCGACCTC
ACGTTTCAGAACTTCCTCGAAACCGGCACGGTGGGAGGCGTTGGCCTCGG
CGCGGCACTGGGTGCTTTGCCCGGGGCCTCGACCGTGAATGGAGCCTTCA
ACGGCTTGGCGAGTAATTTGGCCAACCTGGCAGGCCTTCGTGTCTGCTCT
CCCGTGGATGGTCCTGATCTGGAGCGAATGGTGGCGGGCTCGAGCACTTG
CGGCGTCATTCTCCTGACGAAGGGCTCTATGGTCCCATACTTCACGGAGA
ACACGATGGTTGTGTCAACCCGCAAGATTATCGTGGGCCACCCTATTGAC
CTTCCTCAAATTAGGACGGTAGGGAAACTAGAGCGGGTCTTTGACGTGGT
GTCGGGGGGCTCCTTGGACATTCGTTTCGTGAGCGTCTTCAAAGCATACG
GCCGAGCACCCTCAGAGGACCTCCGTATCGTCGCCGGGGGTGTTGCGTTG
GTGCGCTTGGGAGGCTTCTTCCGCGGTACGGCCGTGATTTTCCGCGAGCC
TACTCAGACTTTCAAAGCCTTTCAAGGCGCGCTGGAGCGCCCCTATCAGC
GTCGCCGCAAGTATGGCGGGCACGTCCTGGTCTTGGGAGGCTCCTTCTTT
TGTTACGGATGTCAGATAATCCGGTGGAACCCTTATGGCGGGATTCTTTT
GAACGTTTTCCAGCTTGGTCGTGATTTCTTGGTTGTTGCCGGGACGAGCG
TCATGACTGGCGTCTATCATTTGGCCTTCACACCTTTCGGAAGCGCAGTC
AGCGTTGGAAATGCTATCGCTGTCCTGGGCGGCGTCAGTGTTCGCATTGG
CGGCGGAACAGAGGGGGTTGCGATTCTCAAGGGACAATTTGGTAGGTCGT
GCGTGGGTGAAGGAGACGAGGGATAGAAGGGGAACAGTAGCAAAAAGGCA
TTCAATAGCATCATGACAGGTCATCATTGGCGAAGTAGGAAAGCCTTGGA
CGCACGAAAGCCTTGGACGCACCTAACACTCATCCCCAACCAAAATACAC
ACACGAACATAATCATACTCGCGCACGACAGGTGCCGGCCAGAATATATT
CGTGGGCGGTGGGGTGCTCGTGAATGTGGGCCATCAGCAGCAGACCGCCT
TTGTGTGCCTTGTGCGTGCGGGCTACGGCATGACTGCTATGGGTGCTGGG
GTGTTTGTACTTATTGCGGAGCTTGAGAACCGTGCGTGGGGTGTGGCTTC
CATCTTCGGTGCCGGGCAGGTGTACTCCAACGGCGCGGGCGTTATGGACA
AGACTGGTGGAGAGGTCGTCAACAGTGCTATTTCGGCCTTCCAAGCCCTG
GCCGGCGGGTCCGCGTACGTCAGATTTCTCTCTCTATACCCCGTTCCTTC
TCTCATGTTTCATTGCTTACAGAGGAGACTAGAGTGTGTTTTGTCTTGCT
GAAATATATGCAATACCTTTTGGGGGTTGTGTGACAGGAAGCGGCCAAGG
TACAGCACTCACTCCATCCATATTTTTTCCTCCTTCTATTTCTCCCACCC
ATGATAGCTATTTGGGCGCGGGTGACATGAACATTGTGGGCGAACAGTTT
GCGCGACTTGCTTTAACCCTGGACCAGAATGGCGTTGGCATGACTTTCTT
TAACGGGGCTGGGCACGGAACTATGATCTACGTCCCCAGTTTGGTGATTT
GCCTCGTCCGTTCTCAGAAGATTCTCGGTGCCGAGGTACGTCTGGCTATG
CGAGATGCGAATTCCGTCTGTCCGTTTCGCGTTTTTGATGATCGATGTGT
CTGTCGGTCCCTCTCCTCTGATTCTAATTTTGGTTTTTGTCCTTGTCCTC
GTATGTATTGTTTCGCCTCTCTGTGTTTCCTGTATCGATTGTGTTTGTGC
CCGCAACCTACCTGTCTCTGCACTCATCCACGGACTCTTAACTGAGTGCT
CTCGCGGGACTGAACCCTGGTAGTTGAAGGGCTTGTCTGTAATCTGTCGG
CGTTTTTTCCTCACACACACACACTCTCCCCATCGCTTTCTTCGATGAAT
ATGCCCCCCCATGAAGTGTGGTCTCATATATCTCTTTGATGTCTCACTCC
AACTTGTTTAGGTCTTCCAAGGAGCCGGGTTTCACACAGAAGTCAACAAT
ACACGCTGGACAATTCAATTGGTGAATGCGCAAATGCCGGGTTATGAAGG
CTGGATCGGGCTGGGTGCCTCTCTGATGATCCGGTCGCGGACCACTGTCA
GGCGTCTGGTGAACTACCGCGCTGCCAAGAAAGTGGCTTGGGTGGTGAAT
GGGGTCGGTGTCAACGAATCGCTGAGGAGCAACTTCAACATTTTTACCGA
CAAGAACGGCACGACAGTCCTGAAGCCGCACGCTAAAAATGGCAAGCACC
GACTCCTGGAAGCTGTGGATGAACTTGTGAGCAGTGCTGCCAGCACATCC
AACAGGCGGGCCCTTATTAAAGGTTTTAGTCGTCCTGCTTTGAGCATGGC
CGACAGTGTGATGGACTCGAAGAAGGTTCAGCCTCCTAACCCCGGGATTC
TGGCCGAAAAACTGCAGGCCCTGGTGTCGGGTTTGAAGAATAAACGCCGT
CTCAAAGGGCAAGCCGCGGTCAACCCCACCCGTATCATGAACATGTTCCA
AGGCCTGTCGCCAGCCTCGCTCATGAAAGCTTGGCAAGAGGCCGTGGACG
AGACTAACAACAACAATGCTCTCGGTAGCAACACCAACGATCGTGCCTTG
GCTGCAGGAAACGATGCCGACGAGGTGGACGCCGACGGCCGGTGGGGCGA
ACAGGTGTACGTGGGCGGCGGTGATGCCTCGCAGTGTGTGCTGTGCGGGG
TCGGTCCCGGGACGACCGAGTCCCACTGGAACAGGGACGCAGGCGACGAC
CCAGCCACCTGCCATATCACGGAGGCATGCACTCCTGCAGATTCAGTCCA
AGGCATCATGGGGAAGCTCAGAGGAGCCTTGCCGGATGGGGAAGACTTAG
TATTGTCGCCCGCGGCGAAGGCTGGGCCAAGACGGTGGGCTCCAAGTACA
CGGCGCGTCTCTTGCAAGATATCGACGATCACCAGGCGGAGAATCCCGGG
GCGGATATCAAGCTGCCGGACACGAACATTTTGACCTACGACATTTTCCT
GTACTGCCCCGTGGCCGATGCGGAGTGTGAGTATAGCCAGGCAAACATGA
AGGCGGCATTCCAAGACTATCTCGACGATGTGGCGCAGGAGGAGACTGCG
TTCAAGATTTCGTCGGCGACTGCAGCGGTGCATCCGGCTATCTCTAAAAT
TGTGAATGATGCTGACGGAGACTTTGTGTCGGCCATTGGGGCGCCGGCGC
TAGAGGGGTGTGGGAAGGGCCTCTCGTTTTCTCTTTTCGTGACGGCGCCC
GACAAATCTTCGGTGACGGATGTGAAGACTATCCTGGAAAAAGCAGGTAC
CGACAGTGATGAACTTCTGGCCTTCATCAACGACCAAGGGGAGCAGGAAG
CATCCTTCTGCAGCGTGAGCGTGACGAAGCGCTCAGCAATGTTTTTCCCG
TCCGTGGACACGGCGGCAGGGAAGAGCTTCTATCAGAAGCTTTACACGGG
CAACGCGCTGGATTCCGGGAGCCTCTGGCCCGACATCACGGTGGTGTCGG
CGCACGAGGTGGCCCCCGTTCAGCACGCAGTGGCGGATCAGTCCTACACA
CTTTTGTTGGAGGGCTTTGCCATGAAGGCGGAAGTGGTGGTGGAGCTGTT
CCAGGGCACGCAGAGCAGCGGGTGGAGGTGGCCAGGGTCCCTGGTGGCAT
GGGCATCGGCGAGACACGCGAGGTGGCTTGGACGGCTCCTGCGCCCATGA

Coding sequence (CDS) from alignment at chr10:1010687..1015236-

>NO10G03560.1 ID=NO10G03560.1|Name=NO10G03560.1|organism=Nannochloropsis oceanica|type=CDS|length=3228bp|location=Sequence derived from alignment at chr10:1010687..1015236- (Nannochloropsis oceanica)
ATGAACGAGGCCGGGCCCCAAGAGGAGTCCCGACGCCGTCGCCGGCGTGT
TCTACTGGGCTCGCTGGGTGCAGTGTGTCTGATCGTCGGTGCCGCGTTGG
CCATAACCTTTGCTGGAAAGGGCCAGGGCAAGAATAAGCCGGAGCCGGCG
GCCACTGTAGAGGGGAATTTGTCTCCGATGGGAGACCTTCCAGGCCTTGT
GAAGGATTCAGTGCTGTCAACCAACGCGGGCACCACCGGTGCCGCTCCGA
AATCCGTAGGTACGACGGTGACGCCCGCTGTCCCCACAGCATCGAAGGCA
GCGCCTGCTGAGGGTACTGGCGACCTCACGTTTCAGAACTTCCTCGAAAC
CGGCACGGTGGGAGGCGTTGGCCTCGGCGCGGCACTGGGTGCTTTGCCCG
GGGCCTCGACCGTGAATGGAGCCTTCAACGGCTTGGCGAGTAATTTGGCC
AACCTGGCAGGCCTTCGTGTCTGCTCTCCCGTGGATGGTCCTGATCTGGA
GCGAATGGTGGCGGGCTCGAGCACTTGCGGCGTCATTCTCCTGACGAAGG
GCTCTATGGTCCCATACTTCACGGAGAACACGATGGTTGTGTCAACCCGC
AAGATTATCGTGGGCCACCCTATTGACCTTCCTCAAATTAGGACGGTAGG
GAAACTAGAGCGGGTCTTTGACGTGGTGTCGGGGGGCTCCTTGGACATTC
GTTTCGTGAGCGTCTTCAAAGCATACGGCCGAGCACCCTCAGAGGACCTC
CGTATCGTCGCCGGGGGTGTTGCGTTGGTGCGCTTGGGAGGCTTCTTCCG
CGGTACGGCCGTGATTTTCCGCGAGCCTACTCAGACTTTCAAAGCCTTTC
AAGGCGCGCTGGAGCGCCCCTATCAGCGTCGCCGCAAGTATGGCGGGCAC
GTCCTGGTCTTGGGAGGCTCCTTCTTTTGTTACGGATGTCAGATAATCCG
GTGGAACCCTTATGGCGGGATTCTTTTGAACGTTTTCCAGCTTGGTCGTG
ATTTCTTGGTTGTTGCCGGGACGAGCGTCATGACTGGCGTCTATCATTTG
GCCTTCACACCTTTCGGAAGCGCAGTCAGCGTTGGAAATGCTATCGCTGT
CCTGGGCGGCGTCAGTGTTCGCATTGGCGGCGGAACAGAGGGGGTTGCGA
TTCTCAAGGGACAATTTGGTGCCGGCCAGAATATATTCGTGGGCGGTGGG
GTGCTCGTGAATGTGGGCCATCAGCAGCAGACCGCCTTTGTGTGCCTTGT
GCGTGCGGGCTACGGCATGACTGCTATGGGTGCTGGGGTGTTTGTACTTA
TTGCGGAGCTTGAGAACCGTGCGTGGGGTGTGGCTTCCATCTTCGGTGCC
GGGCAGGTGTACTCCAACGGCGCGGGCGTTATGGACAAGACTGGTGGAGA
GGTCGTCAACAGTGCTATTTCGGCCTTCCAAGCCCTGGCCGGCGGGTCCG
CCTATTTGGGCGCGGGTGACATGAACATTGTGGGCGAACAGTTTGCGCGA
CTTGCTTTAACCCTGGACCAGAATGGCGTTGGCATGACTTTCTTTAACGG
GGCTGGGCACGGAACTATGATCTACGTCCCCAGTTTGGTGATTTGCCTCG
TCCGTTCTCAGAAGATTCTCGGTGCCGAGGTCTTCCAAGGAGCCGGGTTT
CACACAGAAGTCAACAATACACGCTGGACAATTCAATTGGTGAATGCGCA
AATGCCGGGTTATGAAGGCTGGATCGGGCTGGGTGCCTCTCTGATGATCC
GGTCGCGGACCACTGTCAGGCGTCTGGTGAACTACCGCGCTGCCAAGAAA
GTGGCTTGGGTGGTGAATGGGGTCGGTGTCAACGAATCGCTGAGGAGCAA
CTTCAACATTTTTACCGACAAGAACGGCACGACAGTCCTGAAGCCGCACG
CTAAAAATGGCAAGCACCGACTCCTGGAAGCTGTGGATGAACTTGTGAGC
AGTGCTGCCAGCACATCCAACAGGCGGGCCCTTATTAAAGGTTTTAGTCG
TCCTGCTTTGAGCATGGCCGACAGTGTGATGGACTCGAAGAAGGTTCAGC
CTCCTAACCCCGGGATTCTGGCCGAAAAACTGCAGGCCCTGGTGTCGGGT
TTGAAGAATAAACGCCGTCTCAAAGGGCAAGCCGCGGTCAACCCCACCCG
TATCATGAACATGTTCCAAGGCCTGTCGCCAGCCTCGCTCATGAAAGCTT
GGCAAGAGGCCGTGGACGAGACTAACAACAACAATGCTCTCGGTAGCAAC
ACCAACGATCGTGCCTTGGCTGCAGGAAACGATGCCGACGAGGTGGACGC
CGACGGCCGGTGGGGCGAACAGGTTCCAAGGCATCATGGGGAAGCTCAGA
GGAGCCTTGCCGGATGGGGAAGACTTAGTATTGTCGCCCGCGGCGAAGGC
TGGGCCAAGACGGTGGGCTCCAAGTACACGGCGCGTCTCTTGCAAGATAT
CGACGATCACCAGGCGGAGAATCCCGGGGCGGATATCAAGCTGCCGGACA
CGAACATTTTGACCTACGACATTTTCCTGTACTGCCCCGTGGCCGATGCG
GAGTGTGAGTATAGCCAGGCAAACATGAAGGCGGCATTCCAAGACTATCT
CGACGATGTGGCGCAGGAGGAGACTGCGTTCAAGATTTCGTCGGCGACTG
CAGCGGTGCATCCGGCTATCTCTAAAATTGTGAATGATGCTGACGGAGAC
TTTGTGTCGGCCATTGGGGCGCCGGCGCTAGAGGGGTGTGGGAAGGGCCT
CTCGTTTTCTCTTTTCGTGACGGCGCCCGACAAATCTTCGGTGACGGATG
TGAAGACTATCCTGGAAAAAGCAGGTACCGACAGTGATGAACTTCTGGCC
TTCATCAACGACCAAGGGGAGCAGGAAGCATCCTTCTGCAGCGTGAGCGT
GACGAAGCGCTCAGCAATGTTTTTCCCGTCCGTGGACACGGCGGCAGGGA
AGAGCTTCTATCAGAAGCTTTACACGGGCAACGCGCTGGATTCCGGGAGC
CTCTGGCCCGACATCACGGTGGTGTCGGCGCACGAGGTGGCCCCCGTTCA
GCACGCAGTGGCGGATCAGTCCTACACACTTTTGTTGGAGGGCTTTGCCA
TGAAGGCGGAAGTGGTGGTGGAGCTGTTCCAGGGCACGCAGAGCAGCGGG
TGGAGGTGGCCAGGGTCCCTGGTGGCATGGGCATCGGCGAGACACGCGAG
GTGGCTTGGACGGCTCCTGCGCCCATGA

Synonyms

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