NO10G02530.1, NO10G02530.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G02530.1
Unique Name	NO10G02530.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4134
Alignment location	chr10:684799..688932 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:684799..688932 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G02530.1 vs.
Match: EWM25376.1 (potassium channel skor [Nannochloropsis gaditana])

HSP 1 Score: 2037.7 bits (5278), Expect = 0.000e+0
Identity = 1023/1306 (78.33%), Postives = 1146/1306 (87.75%), Query Frame = 0

Query:   68 SNLSLNGPLGTFPAQKLSRVGGHVRGVRERLKRAWKLWLVKRKLRASLLTSKGSSSTQLAMPDFERHFARFDLEHCGWLDRTRTELLLNRGFDVYLSREEWELVAESLEDKVVGKVDLATVERFWMELNGIAIKAPVNSALDVSIRGGKSLDLSQRAAKELAVLNAGGSKRLAAGVVIMERRSWSEALLFDSKGHFIALWRLVMTFNALYYFLSVPFMIAFLRDEILGEYRTSLYVAYAFDCLLFCDVFVKLNTSFLDTTCSVLVVNRQRIRNRYLTGGFFRDLIGLLPIDILVRYLGASGTLVTFMRLPKMLFCYRLVNFFRRRSLSSSSRLAADLQALLFSALGMIHILTCIWFFMTEGDPGNYQALSGYEDFGDYTNHPSGGGPFRLEYYFFCYMLLATLLSTQAIYDLVMGRVSEICFTIVILLLNLTAWAYLMGTISGLCVTADESIAQSHELMTAVSRFIQHNPMPPGVSEELKSYFNVNAQQKTQLSLTEQTEIYRNLPLSLQVEAARHISRDSLLSVEIFEKTSDYFLDSISTLLDMEIFGVGDYVYKADDICRSLYVVASGSVEVGKMNPETNEFEADEMAGSGSALGQLEFLFDVRYMNSARVSGADGVRVFRLGKEDFTRVIKLYPMDEDILYENLSRLADDKMETGSRAPSMAQSMSTHSLDMTVIAGDDLIEKAMDSIDKAQKRSKEQRIRSFCNAAAEGNMDILQRLLRSGIDVNGRDCNERTALMVASSAGNFELVKWLVSLGAEVNLQDKFGGSALSDAMHQNTPVHMEIMGFLSQRGAVLELEDAAGQLCQAAADGEQKKLARMLEMNISPNVADYDQRTPLHLAASQGHLNCVKLLLNFWADVNPIDRMGGTPLSDAVRHGHIAIQAMLREHGGLLNMDPVELGTRACEAGSSGDLDNIRVLVDNGADINTGDYDGRTALHMATCYNRLSVIEYLVSIPSINVNPLDRLGQTPLDDAKREGLPAIVNILQARGGLSGTHPSLEDRMVEQKEKKARMQGAKLQQRLLAARLFDEWSSVQDELSRVYKYMSEYLPPLCKYINILSMTLRSRRTQSTIDRSPKPDLMETRLYFYNSFLAFLERRYKVNLESSMTLVEEMDDAGSFEDKVRIASLILERYLDAKSADRVHFHPMQVIEVRERFQAALKKQVFPADLFAAFRASVAEKMEELLSGYFESDFYYRACRQPNGFLWRVMKLSRLIYGMCDQTLEQVIDPFLALCDRDVLACVPHYSLMNRQAFRDDFVKLKSHITSLQPVLHIVGYKCKHDAMRESIKERREKHGGLAAMTGGAG 1374
            S+ SL G +G+  A +L  +    R +  RL  AWKL+ +KRKLRASL   +G S TQLAMPDF RHFAR DLE C WLDR RTELLL RGFD  LSR EW L+AESL+D VVGKV LA VERFWMELNG++ K  V SALD S RG  SL+ SQR  K+ A  +A GSKR+   ++++ERRSWSEALLFD KG FI++W +VM  NALYYFLSVPF+IAFLRDEILGEY + L+VAYAFDCLL CDV VKLNTSF+DT+CSVLVVNR+RIR+RYLTGGF RDL+G+LP+DILVR+LG SGTLV F+RLPK++FCYRLVNFFRRRSL+SSSRLA DLQALLFSALGMIHILTC+WFFMTEGDPGNYQALSGYED+G+YTN PSGGGPFRLEYY FCYML+ T++STQ IYD+VMG+V EI FT+ ILLLNL+AWAYLMGTISGLCVTADESIAQSHELMTAVSRFIQHNPMPPGVSEELK YFN+NAQQKTQLSLTEQT+IY +LPLSLQVEAARHISRDSLL VEIF KTS+YFLDS+STLLDME+FGVGDYVYKADDICRSLY+VASGSVEVGKMN ETNEFE DE+AG G ALGQLEFLFDVRYM SARVSGAD VRVFRLGKEDFTRVIKLYPMDEDILYENLSRLADDKMET SRAPS AQSMSTHSLD TV+ GDDL+EKAMDSIDKA+KRSKEQRIRSFCNAAAEGNMDILQRLLRSGID+NGRDCNERTALM+A+ A NFELVKWLVSLGAEVNL+DKFGGSAL DAM  +TP+HMEIMGFLS++GAVLEL+DAAG+LCQAAADGE++KLARMLE+N SP+VADYD+RTPLHLAAS+G L+CVKLLL +WADVNPIDRMGGTPLSDAVRHGH+ IQ +LR+HGG LNMDP ELGT ACEAGSSGDLD+IRVLV+NGADINTGDYDGRTALHMATCYNRLSVIEYLVS+PSIN+NPLDRL  TPLDDA+REG  AIV ILQARGG+ GTHPSL+D++ +Q++KKA  +  K  +R   ARLF+EWS VQ++LSRVY +MSEYLP LCK INILSMTLRSRRTQSTIDRSP+PDL ETRLYFY SFLAFLERRYKVNLE S+TL+EE+++  SFEDK RIA  I+ER+LDAKS+DRVHFHP QV  V+ER  AA  ++VFP DL   FRASV EKMEELL  YF+SDFYYRACRQPNGFLWRVMKLSRL++G+C+Q L  VI+PFL LC+RD LACVPHYS  NRQAFR++FVKLK++ITSLQPVLHIVGYK KHDAM+E IKERREK  G     GG G
Sbjct: 1509 SDSSLQGQMGSLSANQLPHLYVKKRNLWTRLCTAWKLFCIKRKLRASLKAGEGQSRTQLAMPDFARHFARLDLERCDWLDRNRTELLLARGFDADLSRGEWGLLAESLKDNVVGKVSLAAVERFWMELNGVSAKLQVASALDASQRGINSLNPSQRVLKDNAAFDAEGSKRIPGAMILVERRSWSEALLFDRKGWFISMWVVVMIVNALYYFLSVPFIIAFLRDEILGEYESCLWVAYAFDCLLLCDVLVKLNTSFIDTSCSVLVVNRRRIRHRYLTGGFLRDLVGMLPVDILVRFLGGSGTLVAFLRLPKLIFCYRLVNFFRRRSLNSSSRLAVDLQALLFSALGMIHILTCVWFFMTEGDPGNYQALSGYEDYGNYTNDPSGGGPFRLEYYIFCYMLITTIISTQGIYDVVMGQVREIWFTMFILLLNLSAWAYLMGTISGLCVTADESIAQSHELMTAVSRFIQHNPMPPGVSEELKGYFNINAQQKTQLSLTEQTQIYHSLPLSLQVEAARHISRDSLLCVEIFTKTSEYFLDSVSTLLDMELFGVGDYVYKADDICRSLYIVASGSVEVGKMNSETNEFEVDEIAGVGYALGQLEFLFDVRYMTSARVSGADDVRVFRLGKEDFTRVIKLYPMDEDILYENLSRLADDKMETSSRAPSTAQSMSTHSLDFTVVGGDDLMEKAMDSIDKAKKRSKEQRIRSFCNAAAEGNMDILQRLLRSGIDINGRDCNERTALMLATCADNFELVKWLVSLGAEVNLRDKFGGSALLDAMRHSTPLHMEIMGFLSKQGAVLELDDAAGELCQAAADGEKEKLARMLELNTSPDVADYDKRTPLHLAASEGRLDCVKLLLEYWADVNPIDRMGGTPLSDAVRHGHLHIQTLLRQHGGKLNMDPFELGTCACEAGSSGDLDSIRVLVENGADINTGDYDGRTALHMATCYNRLSVIEYLVSLPSINLNPLDRLVNTPLDDAEREGQGAIVKILQARGGVPGTHPSLKDQVAQQRQKKAEAEAVKKMRREADARLFEEWSLVQEDLSRVYSFMSEYLPSLCKNINILSMTLRSRRTQSTIDRSPRPDLAETRLYFYKSFLAFLERRYKVNLEMSLTLIEELEEVTSFEDKARIAGYIVERFLDAKSSDRVHFHPTQVGLVKERLLAAFPEKVFPVDLLEPFRASVVEKMEELLPDYFKSDFYYRACRQPNGFLWRVMKLSRLLHGLCNQILVDVINPFLKLCNRDALACVPHYSKSNRQAFREEFVKLKNNITSLQPVLHIVGYKSKHDAMQECIKERREKRTG----NGGTG 2810

The following BLAST results are available for this feature:

BLAST of NO10G02530.1 vs.

BLAST of NO10G02530.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25376.1	0.000e+0	78.33	potassium channel skor [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G02530	NO10G02530	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G02530.1	NO10G02530.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G02530.1.cds1	NO10G02530.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:684799..688932+
coding sequence from alignment at chr10:684799..688932+

mRNA sequence

>NO10G02530.1 ID=NO10G02530.1|Name=NO10G02530.1|organism=Nannochloropsis oceanica|type=mRNA|length=4134bp
ATGGCAGATCGGGATAGTTATATGCGTTACAATTTGCACGGAGGCAGCAT
TGTGGGTGCTCATGGACCGTATGGTGGGCTCAACAACAATGACCACCACC
GCCATCATCATCATATAGGCGGAGGGAGGGAAGAAGGAATGGTGGTAGCG
AAGGAGACTGATATGGTGCCTATGGTTCTGGAGAGGGGGAGGGGAGGAGG
GAGCAATTTAAGTTTAAATGGACCCTTGGGTACATTTCCGGCGCAGAAAT
TGTCGAGGGTGGGGGGGCATGTGCGTGGGGTAAGGGAACGATTAAAGAGG
GCGTGGAAATTGTGGTTGGTGAAGCGGAAGCTGAGGGCTTCATTGTTGAC
AAGTAAGGGTTCGTCGTCGACTCAATTGGCGATGCCAGATTTTGAGCGAC
ATTTTGCGAGGTTTGATTTGGAGCACTGTGGGTGGTTGGACCGGACTAGG
ACGGAGTTGTTGTTGAACCGCGGGTTTGACGTCTACTTGAGTCGAGAGGA
ATGGGAGTTGGTGGCGGAGAGCTTGGAGGATAAGGTGGTGGGGAAGGTTG
ACCTGGCGACCGTCGAACGGTTCTGGATGGAACTAAATGGGATAGCGATT
AAGGCACCGGTGAACTCGGCGTTAGACGTATCCATTCGGGGGGGGAAAAG
CTTGGATTTGTCGCAGAGGGCCGCGAAGGAATTAGCGGTTTTGAATGCTG
GAGGTTCGAAGAGGCTGGCAGCTGGAGTGGTGATCATGGAGAGGCGGTCA
TGGAGTGAAGCGTTGTTGTTTGACAGCAAGGGGCATTTCATTGCCCTGTG
GCGTTTGGTGATGACCTTTAATGCGCTATATTACTTCTTAAGTGTGCCTT
TTATGATTGCATTTTTGAGGGATGAGATTCTGGGGGAATATCGGACTTCG
CTTTATGTGGCGTATGCGTTTGACTGTTTATTGTTTTGTGACGTTTTTGT
CAAGCTGAACACGAGCTTTCTGGACACAACCTGCAGTGTCTTAGTGGTGA
ATCGACAGCGCATCCGCAATCGTTATCTGACAGGTGGATTTTTCCGGGAC
TTGATAGGCCTGCTCCCCATCGATATCTTGGTGCGCTACCTTGGGGCTTC
AGGCACTCTAGTGACTTTTATGCGGTTGCCCAAGATGCTCTTCTGCTACC
GCCTCGTCAACTTCTTCAGGCGCCGTTCCCTCTCCTCCTCCTCTCGTTTG
GCCGCCGATTTGCAAGCGTTGTTGTTTTCGGCGCTGGGCATGATCCACAT
TTTGACATGCATTTGGTTTTTCATGACGGAGGGAGACCCGGGAAATTATC
AGGCGTTAAGCGGCTACGAGGATTTTGGGGATTACACAAACCATCCATCG
GGCGGAGGGCCCTTTCGGTTGGAGTACTATTTCTTTTGTTACATGCTGTT
GGCGACCCTGCTTTCGACACAGGCTATTTACGATTTGGTCATGGGAAGGG
TGAGCGAGATTTGTTTCACGATAGTGATTTTATTGTTGAATTTGACGGCA
TGGGCGTATCTGATGGGAACTATTTCGGGTTTGTGCGTGACGGCGGATGA
GTCCATTGCTCAATCCCATGAGCTCATGACGGCCGTTTCTCGCTTCATCC
AGCACAACCCAATGCCGCCCGGAGTCTCTGAAGAGCTGAAAAGCTACTTC
AATGTGAATGCTCAGCAGAAAACACAGCTCTCCCTTACGGAACAAACCGA
GATCTACCGCAACCTTCCCCTCTCTCTCCAAGTGGAAGCTGCCCGGCACA
TCTCCCGGGACTCTCTCCTGAGCGTCGAAATATTTGAGAAGACCTCCGAT
TATTTCCTTGATTCTATATCCACCTTGTTGGACATGGAGATTTTTGGCGT
TGGAGACTACGTGTACAAAGCTGATGATATCTGCCGTTCTCTTTACGTGG
TTGCCTCCGGGAGTGTGGAGGTTGGGAAAATGAACCCCGAAACGAATGAA
TTTGAGGCAGATGAGATGGCGGGGTCTGGGAGTGCGCTGGGACAGTTAGA
ATTTCTGTTTGATGTGCGATATATGAATTCCGCGAGGGTTTCGGGGGCGG
ATGGGGTGAGGGTGTTTCGATTGGGCAAGGAAGATTTTACTAGGGTGATA
AAATTGTACCCTATGGATGAAGACATTTTGTATGAGAACTTGTCAAGGCT
GGCGGATGATAAGATGGAGACAGGCTCAAGGGCTCCGAGCATGGCCCAGA
GTATGTCGACGCATTCGCTTGATATGACGGTGATTGCCGGGGATGATTTG
ATTGAGAAAGCTATGGATAGTATTGATAAGGCCCAGAAGCGGAGCAAGGA
ACAGCGGATTCGCTCATTTTGCAATGCCGCTGCGGAAGGAAATATGGACA
TTTTGCAGCGGTTGCTGAGGAGTGGGATTGATGTGAATGGCCGAGATTGC
AATGAGCGGACAGCATTGATGGTAGCCAGCTCTGCAGGGAATTTCGAGTT
GGTTAAATGGTTGGTTTCGTTGGGTGCAGAGGTCAATTTGCAGGATAAAT
TTGGAGGATCGGCATTATCTGATGCCATGCATCAAAACACGCCGGTGCAT
ATGGAGATCATGGGATTTTTGAGCCAGAGGGGGGCGGTGCTTGAGTTAGA
GGATGCGGCGGGGCAGCTATGCCAGGCGGCGGCGGATGGGGAGCAGAAAA
AGTTGGCACGGATGCTTGAGATGAATATATCACCAAATGTGGCTGATTAT
GATCAGCGGACGCCATTGCACTTGGCAGCATCACAGGGGCATTTGAATTG
TGTAAAGTTATTGCTAAATTTTTGGGCGGATGTGAACCCCATTGATCGGA
TGGGGGGGACGCCTTTATCGGATGCGGTGAGACATGGCCATATTGCGATT
CAGGCGATGCTGAGAGAGCACGGGGGATTGTTGAACATGGATCCGGTGGA
GTTGGGGACGCGTGCATGCGAGGCAGGATCATCTGGGGATTTGGATAATA
TTCGGGTGTTGGTTGATAATGGCGCGGATATAAACACAGGCGATTATGAT
GGGCGGACGGCTTTGCACATGGCGACGTGCTATAATCGGCTAAGTGTAAT
TGAGTACTTGGTATCAATTCCTTCGATCAATGTCAACCCCTTGGATCGAC
TGGGGCAGACACCTTTGGACGACGCCAAGCGGGAGGGATTGCCTGCCATT
GTGAATATTTTGCAGGCTCGTGGGGGATTGTCAGGTACTCACCCCAGTCT
CGAAGATCGCATGGTGGAGCAGAAGGAGAAAAAAGCAAGAATGCAGGGAG
CCAAGTTGCAGCAGAGATTATTAGCTGCGCGATTATTTGATGAGTGGAGC
TCAGTGCAAGACGAATTATCAAGGGTGTATAAGTATATGAGTGAGTACTT
GCCACCGCTTTGCAAATATATAAATATTTTGAGCATGACCTTGCGAAGTC
GGCGGACGCAGAGCACGATTGATCGGTCCCCGAAGCCAGATTTGATGGAG
ACTCGGTTGTACTTTTATAATTCGTTCTTGGCTTTCCTGGAGAGGAGGTA
CAAGGTAAATTTGGAGTCGTCGATGACATTGGTTGAAGAGATGGATGATG
CGGGTTCTTTTGAGGATAAGGTCAGGATTGCCAGTCTGATTTTAGAAAGG
TATTTAGATGCCAAGTCCGCTGATCGTGTGCATTTCCACCCGATGCAGGT
GATAGAAGTGAGGGAGAGGTTTCAGGCTGCTTTGAAGAAGCAGGTATTCC
CCGCGGATTTGTTTGCGGCGTTTCGGGCGAGTGTTGCGGAAAAGATGGAG
GAGCTCTTGAGCGGGTATTTTGAGAGCGATTTTTACTACCGTGCGTGTCG
GCAGCCAAATGGGTTTCTGTGGCGAGTAATGAAGCTTTCCAGGCTTATTT
ATGGGATGTGTGATCAGACGCTGGAGCAGGTCATCGATCCTTTCCTAGCT
TTGTGTGATCGAGATGTCTTGGCATGTGTGCCGCATTATTCTCTCATGAA
CCGTCAGGCTTTTCGGGACGATTTCGTGAAGCTCAAGAGTCATATCACCT
CCCTCCAGCCGGTTCTGCACATAGTTGGCTATAAATGTAAGCATGATGCA
ATGCGGGAATCGATCAAGGAGCGCAGGGAGAAGCATGGGGGGTTGGCAGC
CATGACGGGTGGGGCAGGAGGAAAGTACAATTAA

protein sequence of NO10G02530.1

>NO10G02530.1-protein ID=NO10G02530.1-protein|Name=NO10G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1378bp
MADRDSYMRYNLHGGSIVGAHGPYGGLNNNDHHRHHHHIGGGREEGMVVA
KETDMVPMVLERGRGGGSNLSLNGPLGTFPAQKLSRVGGHVRGVRERLKR
AWKLWLVKRKLRASLLTSKGSSSTQLAMPDFERHFARFDLEHCGWLDRTR
TELLLNRGFDVYLSREEWELVAESLEDKVVGKVDLATVERFWMELNGIAI
KAPVNSALDVSIRGGKSLDLSQRAAKELAVLNAGGSKRLAAGVVIMERRS
WSEALLFDSKGHFIALWRLVMTFNALYYFLSVPFMIAFLRDEILGEYRTS
LYVAYAFDCLLFCDVFVKLNTSFLDTTCSVLVVNRQRIRNRYLTGGFFRD
LIGLLPIDILVRYLGASGTLVTFMRLPKMLFCYRLVNFFRRRSLSSSSRL
AADLQALLFSALGMIHILTCIWFFMTEGDPGNYQALSGYEDFGDYTNHPS
GGGPFRLEYYFFCYMLLATLLSTQAIYDLVMGRVSEICFTIVILLLNLTA
WAYLMGTISGLCVTADESIAQSHELMTAVSRFIQHNPMPPGVSEELKSYF
NVNAQQKTQLSLTEQTEIYRNLPLSLQVEAARHISRDSLLSVEIFEKTSD
YFLDSISTLLDMEIFGVGDYVYKADDICRSLYVVASGSVEVGKMNPETNE
FEADEMAGSGSALGQLEFLFDVRYMNSARVSGADGVRVFRLGKEDFTRVI
KLYPMDEDILYENLSRLADDKMETGSRAPSMAQSMSTHSLDMTVIAGDDL
IEKAMDSIDKAQKRSKEQRIRSFCNAAAEGNMDILQRLLRSGIDVNGRDC
NERTALMVASSAGNFELVKWLVSLGAEVNLQDKFGGSALSDAMHQNTPVH
MEIMGFLSQRGAVLELEDAAGQLCQAAADGEQKKLARMLEMNISPNVADY
DQRTPLHLAASQGHLNCVKLLLNFWADVNPIDRMGGTPLSDAVRHGHIAI
QAMLREHGGLLNMDPVELGTRACEAGSSGDLDNIRVLVDNGADINTGDYD
GRTALHMATCYNRLSVIEYLVSIPSINVNPLDRLGQTPLDDAKREGLPAI
VNILQARGGLSGTHPSLEDRMVEQKEKKARMQGAKLQQRLLAARLFDEWS
SVQDELSRVYKYMSEYLPPLCKYINILSMTLRSRRTQSTIDRSPKPDLME
TRLYFYNSFLAFLERRYKVNLESSMTLVEEMDDAGSFEDKVRIASLILER
YLDAKSADRVHFHPMQVIEVRERFQAALKKQVFPADLFAAFRASVAEKME
ELLSGYFESDFYYRACRQPNGFLWRVMKLSRLIYGMCDQTLEQVIDPFLA
LCDRDVLACVPHYSLMNRQAFRDDFVKLKSHITSLQPVLHIVGYKCKHDA
MRESIKERREKHGGLAAMTGGAGGKYN*

mRNA from alignment at chr10:684799..688932+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G02530.1 ID=NO10G02530.1|Name=NO10G02530.1|organism=Nannochloropsis oceanica|type=mRNA|length=4134bp|location=Sequence derived from alignment at chr10:684799..688932+ (Nannochloropsis oceanica)
ATGGCAGATCGGGATAGTTATATGCGTTACAATTTGCACGGAGGCAGCAT
TGTGGGTGCTCATGGACCGTATGGTGGGCTCAACAACAATGACCACCACC
GCCATCATCATCATATAGGCGGAGGGAGGGAAGAAGGAATGGTGGTAGCG
AAGGAGACTGATATGGTGCCTATGGTTCTGGAGAGGGGGAGGGGAGGAGG
GAGCAATTTAAGTTTAAATGGACCCTTGGGTACATTTCCGGCGCAGAAAT
TGTCGAGGGTGGGGGGGCATGTGCGTGGGGTAAGGGAACGATTAAAGAGG
GCGTGGAAATTGTGGTTGGTGAAGCGGAAGCTGAGGGCTTCATTGTTGAC
AAGTAAGGGTTCGTCGTCGACTCAATTGGCGATGCCAGATTTTGAGCGAC
ATTTTGCGAGGTTTGATTTGGAGCACTGTGGGTGGTTGGACCGGACTAGG
ACGGAGTTGTTGTTGAACCGCGGGTTTGACGTCTACTTGAGTCGAGAGGA
ATGGGAGTTGGTGGCGGAGAGCTTGGAGGATAAGGTGGTGGGGAAGGTTG
ACCTGGCGACCGTCGAACGGTTCTGGATGGAACTAAATGGGATAGCGATT
AAGGCACCGGTGAACTCGGCGTTAGACGTATCCATTCGGGGGGGGAAAAG
CTTGGATTTGTCGCAGAGGGCCGCGAAGGAATTAGCGGTTTTGAATGCTG
GAGGTTCGAAGAGGCTGGCAGCTGGAGTGGTGATCATGGAGAGGCGGTCA
TGGAGTGAAGCGTTGTTGTTTGACAGCAAGGGGCATTTCATTGCCCTGTG
GCGTTTGGTGATGACCTTTAATGCGCTATATTACTTCTTAAGTGTGCCTT
TTATGATTGCATTTTTGAGGGATGAGATTCTGGGGGAATATCGGACTTCG
CTTTATGTGGCGTATGCGTTTGACTGTTTATTGTTTTGTGACGTTTTTGT
CAAGCTGAACACGAGCTTTCTGGACACAACCTGCAGTGTCTTAGTGGTGA
ATCGACAGCGCATCCGCAATCGTTATCTGACAGGTGGATTTTTCCGGGAC
TTGATAGGCCTGCTCCCCATCGATATCTTGGTGCGCTACCTTGGGGCTTC
AGGCACTCTAGTGACTTTTATGCGGTTGCCCAAGATGCTCTTCTGCTACC
GCCTCGTCAACTTCTTCAGGCGCCGTTCCCTCTCCTCCTCCTCTCGTTTG
GCCGCCGATTTGCAAGCGTTGTTGTTTTCGGCGCTGGGCATGATCCACAT
TTTGACATGCATTTGGTTTTTCATGACGGAGGGAGACCCGGGAAATTATC
AGGCGTTAAGCGGCTACGAGGATTTTGGGGATTACACAAACCATCCATCG
GGCGGAGGGCCCTTTCGGTTGGAGTACTATTTCTTTTGTTACATGCTGTT
GGCGACCCTGCTTTCGACACAGGCTATTTACGATTTGGTCATGGGAAGGG
TGAGCGAGATTTGTTTCACGATAGTGATTTTATTGTTGAATTTGACGGCA
TGGGCGTATCTGATGGGAACTATTTCGGGTTTGTGCGTGACGGCGGATGA
GTCCATTGCTCAATCCCATGAGCTCATGACGGCCGTTTCTCGCTTCATCC
AGCACAACCCAATGCCGCCCGGAGTCTCTGAAGAGCTGAAAAGCTACTTC
AATGTGAATGCTCAGCAGAAAACACAGCTCTCCCTTACGGAACAAACCGA
GATCTACCGCAACCTTCCCCTCTCTCTCCAAGTGGAAGCTGCCCGGCACA
TCTCCCGGGACTCTCTCCTGAGCGTCGAAATATTTGAGAAGACCTCCGAT
TATTTCCTTGATTCTATATCCACCTTGTTGGACATGGAGATTTTTGGCGT
TGGAGACTACGTGTACAAAGCTGATGATATCTGCCGTTCTCTTTACGTGG
TTGCCTCCGGGAGTGTGGAGGTTGGGAAAATGAACCCCGAAACGAATGAA
TTTGAGGCAGATGAGATGGCGGGGTCTGGGAGTGCGCTGGGACAGTTAGA
ATTTCTGTTTGATGTGCGATATATGAATTCCGCGAGGGTTTCGGGGGCGG
ATGGGGTGAGGGTGTTTCGATTGGGCAAGGAAGATTTTACTAGGGTGATA
AAATTGTACCCTATGGATGAAGACATTTTGTATGAGAACTTGTCAAGGCT
GGCGGATGATAAGATGGAGACAGGCTCAAGGGCTCCGAGCATGGCCCAGA
GTATGTCGACGCATTCGCTTGATATGACGGTGATTGCCGGGGATGATTTG
ATTGAGAAAGCTATGGATAGTATTGATAAGGCCCAGAAGCGGAGCAAGGA
ACAGCGGATTCGCTCATTTTGCAATGCCGCTGCGGAAGGAAATATGGACA
TTTTGCAGCGGTTGCTGAGGAGTGGGATTGATGTGAATGGCCGAGATTGC
AATGAGCGGACAGCATTGATGGTAGCCAGCTCTGCAGGGAATTTCGAGTT
GGTTAAATGGTTGGTTTCGTTGGGTGCAGAGGTCAATTTGCAGGATAAAT
TTGGAGGATCGGCATTATCTGATGCCATGCATCAAAACACGCCGGTGCAT
ATGGAGATCATGGGATTTTTGAGCCAGAGGGGGGCGGTGCTTGAGTTAGA
GGATGCGGCGGGGCAGCTATGCCAGGCGGCGGCGGATGGGGAGCAGAAAA
AGTTGGCACGGATGCTTGAGATGAATATATCACCAAATGTGGCTGATTAT
GATCAGCGGACGCCATTGCACTTGGCAGCATCACAGGGGCATTTGAATTG
TGTAAAGTTATTGCTAAATTTTTGGGCGGATGTGAACCCCATTGATCGGA
TGGGGGGGACGCCTTTATCGGATGCGGTGAGACATGGCCATATTGCGATT
CAGGCGATGCTGAGAGAGCACGGGGGATTGTTGAACATGGATCCGGTGGA
GTTGGGGACGCGTGCATGCGAGGCAGGATCATCTGGGGATTTGGATAATA
TTCGGGTGTTGGTTGATAATGGCGCGGATATAAACACAGGCGATTATGAT
GGGCGGACGGCTTTGCACATGGCGACGTGCTATAATCGGCTAAGTGTAAT
TGAGTACTTGGTATCAATTCCTTCGATCAATGTCAACCCCTTGGATCGAC
TGGGGCAGACACCTTTGGACGACGCCAAGCGGGAGGGATTGCCTGCCATT
GTGAATATTTTGCAGGCTCGTGGGGGATTGTCAGGTACTCACCCCAGTCT
CGAAGATCGCATGGTGGAGCAGAAGGAGAAAAAAGCAAGAATGCAGGGAG
CCAAGTTGCAGCAGAGATTATTAGCTGCGCGATTATTTGATGAGTGGAGC
TCAGTGCAAGACGAATTATCAAGGGTGTATAAGTATATGAGTGAGTACTT
GCCACCGCTTTGCAAATATATAAATATTTTGAGCATGACCTTGCGAAGTC
GGCGGACGCAGAGCACGATTGATCGGTCCCCGAAGCCAGATTTGATGGAG
ACTCGGTTGTACTTTTATAATTCGTTCTTGGCTTTCCTGGAGAGGAGGTA
CAAGGTAAATTTGGAGTCGTCGATGACATTGGTTGAAGAGATGGATGATG
CGGGTTCTTTTGAGGATAAGGTCAGGATTGCCAGTCTGATTTTAGAAAGG
TATTTAGATGCCAAGTCCGCTGATCGTGTGCATTTCCACCCGATGCAGGT
GATAGAAGTGAGGGAGAGGTTTCAGGCTGCTTTGAAGAAGCAGGTATTCC
CCGCGGATTTGTTTGCGGCGTTTCGGGCGAGTGTTGCGGAAAAGATGGAG
GAGCTCTTGAGCGGGTATTTTGAGAGCGATTTTTACTACCGTGCGTGTCG
GCAGCCAAATGGGTTTCTGTGGCGAGTAATGAAGCTTTCCAGGCTTATTT
ATGGGATGTGTGATCAGACGCTGGAGCAGGTCATCGATCCTTTCCTAGCT
TTGTGTGATCGAGATGTCTTGGCATGTGTGCCGCATTATTCTCTCATGAA
CCGTCAGGCTTTTCGGGACGATTTCGTGAAGCTCAAGAGTCATATCACCT
CCCTCCAGCCGGTTCTGCACATAGTTGGCTATAAATGTAAGCATGATGCA
ATGCGGGAATCGATCAAGGAGCGCAGGGAGAAGCATGGGGGGTTGGCAGC
CATGACGGGTGGGGCAGGAGGAAAGTACAATTAA

Coding sequence (CDS) from alignment at chr10:684799..688932+

>NO10G02530.1 ID=NO10G02530.1|Name=NO10G02530.1|organism=Nannochloropsis oceanica|type=CDS|length=4134bp|location=Sequence derived from alignment at chr10:684799..688932+ (Nannochloropsis oceanica)
ATGGCAGATCGGGATAGTTATATGCGTTACAATTTGCACGGAGGCAGCAT
TGTGGGTGCTCATGGACCGTATGGTGGGCTCAACAACAATGACCACCACC
GCCATCATCATCATATAGGCGGAGGGAGGGAAGAAGGAATGGTGGTAGCG
AAGGAGACTGATATGGTGCCTATGGTTCTGGAGAGGGGGAGGGGAGGAGG
GAGCAATTTAAGTTTAAATGGACCCTTGGGTACATTTCCGGCGCAGAAAT
TGTCGAGGGTGGGGGGGCATGTGCGTGGGGTAAGGGAACGATTAAAGAGG
GCGTGGAAATTGTGGTTGGTGAAGCGGAAGCTGAGGGCTTCATTGTTGAC
AAGTAAGGGTTCGTCGTCGACTCAATTGGCGATGCCAGATTTTGAGCGAC
ATTTTGCGAGGTTTGATTTGGAGCACTGTGGGTGGTTGGACCGGACTAGG
ACGGAGTTGTTGTTGAACCGCGGGTTTGACGTCTACTTGAGTCGAGAGGA
ATGGGAGTTGGTGGCGGAGAGCTTGGAGGATAAGGTGGTGGGGAAGGTTG
ACCTGGCGACCGTCGAACGGTTCTGGATGGAACTAAATGGGATAGCGATT
AAGGCACCGGTGAACTCGGCGTTAGACGTATCCATTCGGGGGGGGAAAAG
CTTGGATTTGTCGCAGAGGGCCGCGAAGGAATTAGCGGTTTTGAATGCTG
GAGGTTCGAAGAGGCTGGCAGCTGGAGTGGTGATCATGGAGAGGCGGTCA
TGGAGTGAAGCGTTGTTGTTTGACAGCAAGGGGCATTTCATTGCCCTGTG
GCGTTTGGTGATGACCTTTAATGCGCTATATTACTTCTTAAGTGTGCCTT
TTATGATTGCATTTTTGAGGGATGAGATTCTGGGGGAATATCGGACTTCG
CTTTATGTGGCGTATGCGTTTGACTGTTTATTGTTTTGTGACGTTTTTGT
CAAGCTGAACACGAGCTTTCTGGACACAACCTGCAGTGTCTTAGTGGTGA
ATCGACAGCGCATCCGCAATCGTTATCTGACAGGTGGATTTTTCCGGGAC
TTGATAGGCCTGCTCCCCATCGATATCTTGGTGCGCTACCTTGGGGCTTC
AGGCACTCTAGTGACTTTTATGCGGTTGCCCAAGATGCTCTTCTGCTACC
GCCTCGTCAACTTCTTCAGGCGCCGTTCCCTCTCCTCCTCCTCTCGTTTG
GCCGCCGATTTGCAAGCGTTGTTGTTTTCGGCGCTGGGCATGATCCACAT
TTTGACATGCATTTGGTTTTTCATGACGGAGGGAGACCCGGGAAATTATC
AGGCGTTAAGCGGCTACGAGGATTTTGGGGATTACACAAACCATCCATCG
GGCGGAGGGCCCTTTCGGTTGGAGTACTATTTCTTTTGTTACATGCTGTT
GGCGACCCTGCTTTCGACACAGGCTATTTACGATTTGGTCATGGGAAGGG
TGAGCGAGATTTGTTTCACGATAGTGATTTTATTGTTGAATTTGACGGCA
TGGGCGTATCTGATGGGAACTATTTCGGGTTTGTGCGTGACGGCGGATGA
GTCCATTGCTCAATCCCATGAGCTCATGACGGCCGTTTCTCGCTTCATCC
AGCACAACCCAATGCCGCCCGGAGTCTCTGAAGAGCTGAAAAGCTACTTC
AATGTGAATGCTCAGCAGAAAACACAGCTCTCCCTTACGGAACAAACCGA
GATCTACCGCAACCTTCCCCTCTCTCTCCAAGTGGAAGCTGCCCGGCACA
TCTCCCGGGACTCTCTCCTGAGCGTCGAAATATTTGAGAAGACCTCCGAT
TATTTCCTTGATTCTATATCCACCTTGTTGGACATGGAGATTTTTGGCGT
TGGAGACTACGTGTACAAAGCTGATGATATCTGCCGTTCTCTTTACGTGG
TTGCCTCCGGGAGTGTGGAGGTTGGGAAAATGAACCCCGAAACGAATGAA
TTTGAGGCAGATGAGATGGCGGGGTCTGGGAGTGCGCTGGGACAGTTAGA
ATTTCTGTTTGATGTGCGATATATGAATTCCGCGAGGGTTTCGGGGGCGG
ATGGGGTGAGGGTGTTTCGATTGGGCAAGGAAGATTTTACTAGGGTGATA
AAATTGTACCCTATGGATGAAGACATTTTGTATGAGAACTTGTCAAGGCT
GGCGGATGATAAGATGGAGACAGGCTCAAGGGCTCCGAGCATGGCCCAGA
GTATGTCGACGCATTCGCTTGATATGACGGTGATTGCCGGGGATGATTTG
ATTGAGAAAGCTATGGATAGTATTGATAAGGCCCAGAAGCGGAGCAAGGA
ACAGCGGATTCGCTCATTTTGCAATGCCGCTGCGGAAGGAAATATGGACA
TTTTGCAGCGGTTGCTGAGGAGTGGGATTGATGTGAATGGCCGAGATTGC
AATGAGCGGACAGCATTGATGGTAGCCAGCTCTGCAGGGAATTTCGAGTT
GGTTAAATGGTTGGTTTCGTTGGGTGCAGAGGTCAATTTGCAGGATAAAT
TTGGAGGATCGGCATTATCTGATGCCATGCATCAAAACACGCCGGTGCAT
ATGGAGATCATGGGATTTTTGAGCCAGAGGGGGGCGGTGCTTGAGTTAGA
GGATGCGGCGGGGCAGCTATGCCAGGCGGCGGCGGATGGGGAGCAGAAAA
AGTTGGCACGGATGCTTGAGATGAATATATCACCAAATGTGGCTGATTAT
GATCAGCGGACGCCATTGCACTTGGCAGCATCACAGGGGCATTTGAATTG
TGTAAAGTTATTGCTAAATTTTTGGGCGGATGTGAACCCCATTGATCGGA
TGGGGGGGACGCCTTTATCGGATGCGGTGAGACATGGCCATATTGCGATT
CAGGCGATGCTGAGAGAGCACGGGGGATTGTTGAACATGGATCCGGTGGA
GTTGGGGACGCGTGCATGCGAGGCAGGATCATCTGGGGATTTGGATAATA
TTCGGGTGTTGGTTGATAATGGCGCGGATATAAACACAGGCGATTATGAT
GGGCGGACGGCTTTGCACATGGCGACGTGCTATAATCGGCTAAGTGTAAT
TGAGTACTTGGTATCAATTCCTTCGATCAATGTCAACCCCTTGGATCGAC
TGGGGCAGACACCTTTGGACGACGCCAAGCGGGAGGGATTGCCTGCCATT
GTGAATATTTTGCAGGCTCGTGGGGGATTGTCAGGTACTCACCCCAGTCT
CGAAGATCGCATGGTGGAGCAGAAGGAGAAAAAAGCAAGAATGCAGGGAG
CCAAGTTGCAGCAGAGATTATTAGCTGCGCGATTATTTGATGAGTGGAGC
TCAGTGCAAGACGAATTATCAAGGGTGTATAAGTATATGAGTGAGTACTT
GCCACCGCTTTGCAAATATATAAATATTTTGAGCATGACCTTGCGAAGTC
GGCGGACGCAGAGCACGATTGATCGGTCCCCGAAGCCAGATTTGATGGAG
ACTCGGTTGTACTTTTATAATTCGTTCTTGGCTTTCCTGGAGAGGAGGTA
CAAGGTAAATTTGGAGTCGTCGATGACATTGGTTGAAGAGATGGATGATG
CGGGTTCTTTTGAGGATAAGGTCAGGATTGCCAGTCTGATTTTAGAAAGG
TATTTAGATGCCAAGTCCGCTGATCGTGTGCATTTCCACCCGATGCAGGT
GATAGAAGTGAGGGAGAGGTTTCAGGCTGCTTTGAAGAAGCAGGTATTCC
CCGCGGATTTGTTTGCGGCGTTTCGGGCGAGTGTTGCGGAAAAGATGGAG
GAGCTCTTGAGCGGGTATTTTGAGAGCGATTTTTACTACCGTGCGTGTCG
GCAGCCAAATGGGTTTCTGTGGCGAGTAATGAAGCTTTCCAGGCTTATTT
ATGGGATGTGTGATCAGACGCTGGAGCAGGTCATCGATCCTTTCCTAGCT
TTGTGTGATCGAGATGTCTTGGCATGTGTGCCGCATTATTCTCTCATGAA
CCGTCAGGCTTTTCGGGACGATTTCGTGAAGCTCAAGAGTCATATCACCT
CCCTCCAGCCGGTTCTGCACATAGTTGGCTATAAATGTAAGCATGATGCA
ATGCGGGAATCGATCAAGGAGCGCAGGGAGAAGCATGGGGGGTTGGCAGC
CATGACGGGTGGGGCAGGAGGAAAGTACAATTAA

Synonyms

Publications