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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr10 | genome | chr10:596060..598450 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO10G02170.1 vs.
Match: EWM25435.1 (anthranilate synthase [Nannochloropsis gaditana]) HSP 1 Score: 1270.4 bits (3286), Expect = 0.000e+0 Identity = 641/792 (80.93%), Postives = 684/792 (86.36%), Query Frame = 0
Query: 5 MNMMEVEEGRLSLGAPRYRPLSGRFITNGGVQVTCQVEDVMDTTKEVDALLEGLDSHEGVLLASSYEFPGRYARWTIGFIDPPLKIDSRTLDFTVTALNARGEVLLEVVRDALLHPESPLPLAGLERGKLSEEEGGGTVLRGKVPKSEEYFPEEERSRQPSIFSVIRAVVDMFHSEGDPQFGLYGAFGYDLTFQFESIELQMPRPDNQRDVVLYIPDRVLVVDQDKRAAWRVEYDFSWKGQSTQGLPRTGRVREYQPLPAGSLKRNRDSVVGEYARRVEEAKGQFKVGNLFEVVLSQTFFKECPLKPSEVFARLRTTNPSPYGFLINLGGNEYLIGASPEMFVRCERTKEGLRVETCPISGTIARGSDALEDAARIKAILTNKKEESELTMCTDVDRNDKSRICEPGSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLCHTWAVTVTGAPKTWAIQFIEEQEASPRAWYGGAVGLVAFDGSLNTGLTLRTIRVLDGVAEVRAGATLLYDSDPPAEEAETELKASALVDALEYRGPGTGDDEGGEEVMPPLVPLARRVLLVDHEDSFVHTLANYLRQTGAEVSTVRSGVNALRLIEETRPDLVVLSPGPGCPKDFQLSQTISAALAARVPVFGVCLGLQGMVEHFGGKLDVLAYPMHGKPSHVDLTALSEATDGSSSSSSSSSSAGCSTSSTDSIKLGHKYKIFEGIPQRFEVARYHSLHGNQATFPKELRVTAMSEDGVIMGIEHRDLPLAAVQFHPESILTNPTHGLRMLANALKYLQFEEDKK 797
M MME EEGRLSLGAPRYRPLSGRFIT GGVQVTCQVEDV DT KEVDALLEGLDSHEGVLLASSYEFPGRYARWTIGFIDPPLKI+SR L+F V ALNARGEVLLEV++DAL P+S L LA LER E GGTVL G+VPKS+EYFPEEERSRQPSIFSVIR +VD F S+GDPQ GLYG FGYDLTFQFE I+L+MPR DNQRDVVLY+PDRVLVVDQDKRAAWRVEYDFSW G+STQGL RTGRV EY+ PA +LKR+RDS VGEYARRV AK QFKVGNLFEVVLSQTFFKECP PS VF+RLRTTNPSPYGFLINLG EYLIGASPEMFVRCE+TK GLRVETCPISGTIARGSDALEDAARIKAILTN KEESELTMCTDVDRNDKSRICEPGSVRVLGRRQIEMYSRLIHTVDHVEGYLR+GFDALDAFLCHTWAVTVTGAPKTWAIQFIE+QEASPRAWYGGAVGLVAFDGSLNTGLTLRTIR+L+G+AEVRAGATLLYDSDPPAEEAETELKASAL+DAL T G E ARRVLLVDH+DSFVHTLANYLRQTGA+VSTVRSG NALRLI T+PDL+VLSPGPGCP DF LS TI AALA+RVPVFGVCLGLQGMVEHFGG+LDVLAYPMHGKPS V LT ++T LGH+YKIFEG+P+ F+VARYHSLHG +A FP++LRVTAMSEDGVIMGIEHR+LP AAVQFHPESILTNP HGLRMLANA+KYL FE+ K+
Sbjct: 106 MTMMEGEEGRLSLGAPRYRPLSGRFITKGGVQVTCQVEDVSDTGKEVDALLEGLDSHEGVLLASSYEFPGRYARWTIGFIDPPLKIESRGLNFKVKALNARGEVLLEVIQDALERPDSSLALASLERTGHPAGEDGGTVLSGQVPKSDEYFPEEERSRQPSIFSVIRTLVDFFQSDGDPQLGLYGTFGYDLTFQFEPIKLRMPRSDNQRDVVLYLPDRVLVVDQDKRAAWRVEYDFSWNGRSTQGLARTGRVLEYRAAPAEALKRDRDSPVGEYARRVAMAKDQFKVGNLFEVVLSQTFFKECPSAPSRVFSRLRTTNPSPYGFLINLGDGEYLIGASPEMFVRCEQTKAGLRVETCPISGTIARGSDALEDAARIKAILTNPKEESELTMCTDVDRNDKSRICEPGSVRVLGRRQIEMYSRLIHTVDHVEGYLRRGFDALDAFLCHTWAVTVTGAPKTWAIQFIEDQEASPRAWYGGAVGLVAFDGSLNTGLTLRTIRLLNGIAEVRAGATLLYDSDPPAEEAETELKASALIDALACESSETAGVTGEEAAQ--AADEARRVLLVDHQDSFVHTLANYLRQTGADVSTVRSGPNALRLIRNTKPDLLVLSPGPGCPADFHLSDTIDAALASRVPVFGVCLGLQGMVEHFGGQLDVLAYPMHGKPSTVKLT---------------------PAAATGGDVLGHRYKIFEGLPRCFDVARYHSLHGKKAGFPQDLRVTAMSEDGVIMGIEHRELPFAAVQFHPESILTNPKHGLRMLANAVKYLVFEDPKE 874
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO10G02170.1 ID=NO10G02170.1|Name=NO10G02170.1|organism=Nannochloropsis oceanica|type=mRNA|length=2391bp ATGCTCAAGATGATGAACATGATGGAAGTTGAGGAGGGCCGCCTCTCCCT GGGGGCACCACGCTACCGGCCGCTTTCGGGGCGATTTATTACAAATGGCG GCGTACAGGTGACGTGTCAGGTGGAGGACGTGATGGACACTACGAAGGAA GTGGATGCTTTGTTGGAGGGGTTGGATTCGCACGAGGGTGTGTTGCTTGC TTCTTCGTATGAATTTCCCGGGCGGTATGCCCGGTGGACGATTGGGTTTA TTGACCCCCCTCTCAAGATTGACAGCCGCACCTTAGACTTTACAGTCACA GCGCTAAATGCACGGGGAGAGGTCTTGTTGGAAGTTGTCCGAGATGCACT GCTGCACCCTGAGTCGCCCTTACCATTGGCGGGGCTTGAACGCGGCAAAC TATCAGAAGAGGAAGGGGGGGGTACCGTGCTGCGGGGAAAGGTGCCTAAG TCTGAAGAGTATTTCCCGGAGGAAGAACGTTCGAGACAGCCTAGTATTTT CAGTGTAATTCGCGCAGTGGTGGATATGTTTCACAGTGAGGGAGACCCGC AGTTTGGTTTGTATGGGGCGTTTGGCTATGATTTGACATTTCAATTTGAG TCGATCGAGCTTCAGATGCCTCGGCCTGATAACCAACGGGATGTCGTTCT TTATATCCCTGATCGGGTGTTGGTAGTGGATCAGGATAAAAGGGCTGCGT GGCGGGTAGAGTATGACTTTAGCTGGAAGGGGCAGAGCACCCAGGGATTG CCTCGTACGGGGAGGGTGCGGGAGTATCAGCCGTTGCCCGCAGGGAGCTT GAAGAGAAATCGAGATAGTGTGGTTGGAGAGTATGCGAGGAGGGTGGAGG AGGCCAAAGGGCAGTTTAAGGTAGGGAACTTGTTTGAGGTTGTCCTGAGT CAGACATTTTTTAAAGAGTGCCCTTTGAAGCCCTCGGAGGTTTTTGCCCG CTTGCGGACGACGAACCCTTCTCCGTATGGATTCCTTATAAATTTGGGGG GTAATGAGTACTTGATTGGGGCATCTCCGGAGATGTTTGTCAGGTGTGAG AGGACGAAGGAGGGCTTGCGGGTGGAAACGTGTCCGATCTCGGGCACCAT CGCCAGGGGGAGTGATGCGCTTGAAGATGCCGCGAGGATCAAGGCCATTC TAACCAACAAGAAGGAAGAAAGTGAGTTGACCATGTGCACAGACGTGGAT CGGAATGATAAAAGTCGGATATGCGAGCCGGGGTCAGTAAGGGTACTAGG ACGACGGCAGATTGAGATGTATTCTCGGCTTATTCACACGGTGGATCACG TGGAGGGGTATTTGAGGAAAGGATTCGATGCGCTTGATGCCTTTTTATGC CACACCTGGGCAGTAACTGTGACGGGGGCGCCGAAGACGTGGGCGATTCA ATTTATCGAAGAGCAAGAGGCCTCGCCCAGGGCATGGTATGGGGGGGCGG TGGGCCTGGTTGCGTTTGATGGGAGTTTGAACACAGGGTTGACGCTGAGG ACGATTCGAGTTCTAGATGGTGTGGCGGAGGTAAGGGCAGGTGCTACTTT ATTGTATGACTCGGACCCACCTGCGGAGGAGGCGGAGACAGAGCTTAAGG CCTCAGCGCTCGTGGATGCATTGGAGTATCGGGGGCCGGGGACGGGGGAC GACGAAGGGGGAGAGGAGGTGATGCCGCCACTTGTGCCGTTGGCGAGGAG GGTGTTGTTGGTTGACCACGAGGATTCTTTCGTGCATACACTGGCCAATT ATTTGAGGCAGACGGGAGCAGAGGTTAGTACGGTACGAAGTGGAGTGAAT GCGTTGAGGCTGATTGAAGAGACGAGGCCGGATTTGGTCGTGTTGAGCCC AGGGCCTGGGTGCCCCAAGGACTTTCAGTTGTCTCAGACCATCAGTGCAG CTCTAGCTGCCAGGGTACCTGTCTTCGGGGTGTGCTTGGGGCTGCAGGGA ATGGTGGAGCATTTTGGAGGGAAATTGGATGTGCTAGCCTATCCAATGCA TGGGAAGCCGTCACATGTTGACCTCACGGCTCTTTCGGAAGCGACCGACG GCAGCAGTAGCAGTAGCAGCAGCAGCAGCAGCGCTGGTTGTAGTACGAGT AGTACCGATAGTATTAAGTTGGGGCATAAATATAAAATTTTTGAGGGAAT TCCGCAGCGGTTTGAAGTGGCGAGATATCATTCTTTGCATGGAAACCAGG CTACGTTTCCGAAGGAGTTGAGGGTGACGGCAATGAGTGAAGATGGTGTG ATAATGGGGATAGAGCACAGGGACCTGCCTTTGGCGGCCGTGCAGTTTCA CCCAGAGTCGATTCTAACCAACCCCACGCATGGGTTACGGATGCTCGCGA ATGCGTTGAAGTACTTACAATTTGAGGAGGACAAGAAGTAA back to topprotein sequence of NO10G02170.1 >NO10G02170.1-protein ID=NO10G02170.1-protein|Name=NO10G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=797bp MLKMMNMMEVEEGRLSLGAPRYRPLSGRFITNGGVQVTCQVEDVMDTTKE VDALLEGLDSHEGVLLASSYEFPGRYARWTIGFIDPPLKIDSRTLDFTVT ALNARGEVLLEVVRDALLHPESPLPLAGLERGKLSEEEGGGTVLRGKVPK SEEYFPEEERSRQPSIFSVIRAVVDMFHSEGDPQFGLYGAFGYDLTFQFE SIELQMPRPDNQRDVVLYIPDRVLVVDQDKRAAWRVEYDFSWKGQSTQGL PRTGRVREYQPLPAGSLKRNRDSVVGEYARRVEEAKGQFKVGNLFEVVLS QTFFKECPLKPSEVFARLRTTNPSPYGFLINLGGNEYLIGASPEMFVRCE RTKEGLRVETCPISGTIARGSDALEDAARIKAILTNKKEESELTMCTDVD RNDKSRICEPGSVRVLGRRQIEMYSRLIHTVDHVEGYLRKGFDALDAFLC HTWAVTVTGAPKTWAIQFIEEQEASPRAWYGGAVGLVAFDGSLNTGLTLR TIRVLDGVAEVRAGATLLYDSDPPAEEAETELKASALVDALEYRGPGTGD DEGGEEVMPPLVPLARRVLLVDHEDSFVHTLANYLRQTGAEVSTVRSGVN ALRLIEETRPDLVVLSPGPGCPKDFQLSQTISAALAARVPVFGVCLGLQG MVEHFGGKLDVLAYPMHGKPSHVDLTALSEATDGSSSSSSSSSSAGCSTS STDSIKLGHKYKIFEGIPQRFEVARYHSLHGNQATFPKELRVTAMSEDGV IMGIEHRDLPLAAVQFHPESILTNPTHGLRMLANALKYLQFEEDKK* back to topmRNA from alignment at chr10:596060..598450+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO10G02170.1 ID=NO10G02170.1|Name=NO10G02170.1|organism=Nannochloropsis oceanica|type=mRNA|length=2391bp|location=Sequence derived from alignment at chr10:596060..598450+ (Nannochloropsis oceanica) ATGCTCAAGATGATGAACATGATGGAAGTTGAGGAGGGCCGCCTCTCCCT
GGGGGCACCACGCTACCGGCCGCTTTCGGGGCGATTTATTACAAATGGCG
GCGTACAGGTGACGTGTCAGGTGGAGGACGTGATGGACACTACGAAGGAA
GTGGATGCTTTGTTGGAGGGGTTGGATTCGCACGAGGGTGTGTTGCTTGC
TTCTTCGTATGAATTTCCCGGGCGGTATGCCCGGTGGACGATTGGGTTTA
TTGACCCCCCTCTCAAGATTGACAGCCGCACCTTAGACTTTACAGTCACA
GCGCTAAATGCACGGGGAGAGGTCTTGTTGGAAGTTGTCCGAGATGCACT
GCTGCACCCTGAGTCGCCCTTACCATTGGCGGGGCTTGAACGCGGCAAAC
TATCAGAAGAGGAAGGGGGGGGTACCGTGCTGCGGGGAAAGGTGCCTAAG
TCTGAAGAGTATTTCCCGGAGGAAGAACGTTCGAGACAGCCTAGTATTTT
CAGTGTAATTCGCGCAGTGGTGGATATGTTTCACAGTGAGGGAGACCCGC
AGTTTGGTTTGTATGGGGCGTTTGGCTATGATTTGACATTTCAATTTGAG
TCGATCGAGCTTCAGATGCCTCGGCCTGATAACCAACGGGATGTCGTTCT
TTATATCCCTGATCGGGTGTTGGTAGTGGATCAGGATAAAAGGGCTGCGT
GGCGGGTAGAGTATGACTTTAGCTGGAAGGGGCAGAGCACCCAGGGATTG
CCTCGTACGGGGAGGGTGCGGGAGTATCAGCCGTTGCCCGCAGGGAGCTT
GAAGAGAAATCGAGATAGTGTGGTTGGAGAGTATGCGAGGAGGGTGGAGG
AGGCCAAAGGGCAGTTTAAGGTAGGGAACTTGTTTGAGGTTGTCCTGAGT
CAGACATTTTTTAAAGAGTGCCCTTTGAAGCCCTCGGAGGTTTTTGCCCG
CTTGCGGACGACGAACCCTTCTCCGTATGGATTCCTTATAAATTTGGGGG
GTAATGAGTACTTGATTGGGGCATCTCCGGAGATGTTTGTCAGGTGTGAG
AGGACGAAGGAGGGCTTGCGGGTGGAAACGTGTCCGATCTCGGGCACCAT
CGCCAGGGGGAGTGATGCGCTTGAAGATGCCGCGAGGATCAAGGCCATTC
TAACCAACAAGAAGGAAGAAAGTGAGTTGACCATGTGCACAGACGTGGAT
CGGAATGATAAAAGTCGGATATGCGAGCCGGGGTCAGTAAGGGTACTAGG
ACGACGGCAGATTGAGATGTATTCTCGGCTTATTCACACGGTGGATCACG
TGGAGGGGTATTTGAGGAAAGGATTCGATGCGCTTGATGCCTTTTTATGC
CACACCTGGGCAGTAACTGTGACGGGGGCGCCGAAGACGTGGGCGATTCA
ATTTATCGAAGAGCAAGAGGCCTCGCCCAGGGCATGGTATGGGGGGGCGG
TGGGCCTGGTTGCGTTTGATGGGAGTTTGAACACAGGGTTGACGCTGAGG
ACGATTCGAGTTCTAGATGGTGTGGCGGAGGTAAGGGCAGGTGCTACTTT
ATTGTATGACTCGGACCCACCTGCGGAGGAGGCGGAGACAGAGCTTAAGG
CCTCAGCGCTCGTGGATGCATTGGAGTATCGGGGGCCGGGGACGGGGGAC
GACGAAGGGGGAGAGGAGGTGATGCCGCCACTTGTGCCGTTGGCGAGGAG
GGTGTTGTTGGTTGACCACGAGGATTCTTTCGTGCATACACTGGCCAATT
ATTTGAGGCAGACGGGAGCAGAGGTTAGTACGGTACGAAGTGGAGTGAAT
GCGTTGAGGCTGATTGAAGAGACGAGGCCGGATTTGGTCGTGTTGAGCCC
AGGGCCTGGGTGCCCCAAGGACTTTCAGTTGTCTCAGACCATCAGTGCAG
CTCTAGCTGCCAGGGTACCTGTCTTCGGGGTGTGCTTGGGGCTGCAGGGA
ATGGTGGAGCATTTTGGAGGGAAATTGGATGTGCTAGCCTATCCAATGCA
TGGGAAGCCGTCACATGTTGACCTCACGGCTCTTTCGGAAGCGACCGACG
GCAGCAGTAGCAGTAGCAGCAGCAGCAGCAGCGCTGGTTGTAGTACGAGT
AGTACCGATAGTATTAAGTTGGGGCATAAATATAAAATTTTTGAGGGAAT
TCCGCAGCGGTTTGAAGTGGCGAGATATCATTCTTTGCATGGAAACCAGG
CTACGTTTCCGAAGGAGTTGAGGGTGACGGCAATGAGTGAAGATGGTGTG
ATAATGGGGATAGAGCACAGGGACCTGCCTTTGGCGGCCGTGCAGTTTCA
CCCAGAGTCGATTCTAACCAACCCCACGCATGGGTTACGGATGCTCGCGA
ATGCGTTGAAGTACTTACAATTTGAGGAGGACAAGAAGTAA back to topCoding sequence (CDS) from alignment at chr10:596060..598450+ >NO10G02170.1 ID=NO10G02170.1|Name=NO10G02170.1|organism=Nannochloropsis oceanica|type=CDS|length=2391bp|location=Sequence derived from alignment at chr10:596060..598450+ (Nannochloropsis oceanica) ATGCTCAAGATGATGAACATGATGGAAGTTGAGGAGGGCCGCCTCTCCCT GGGGGCACCACGCTACCGGCCGCTTTCGGGGCGATTTATTACAAATGGCG GCGTACAGGTGACGTGTCAGGTGGAGGACGTGATGGACACTACGAAGGAA GTGGATGCTTTGTTGGAGGGGTTGGATTCGCACGAGGGTGTGTTGCTTGC TTCTTCGTATGAATTTCCCGGGCGGTATGCCCGGTGGACGATTGGGTTTA TTGACCCCCCTCTCAAGATTGACAGCCGCACCTTAGACTTTACAGTCACA GCGCTAAATGCACGGGGAGAGGTCTTGTTGGAAGTTGTCCGAGATGCACT GCTGCACCCTGAGTCGCCCTTACCATTGGCGGGGCTTGAACGCGGCAAAC TATCAGAAGAGGAAGGGGGGGGTACCGTGCTGCGGGGAAAGGTGCCTAAG TCTGAAGAGTATTTCCCGGAGGAAGAACGTTCGAGACAGCCTAGTATTTT CAGTGTAATTCGCGCAGTGGTGGATATGTTTCACAGTGAGGGAGACCCGC AGTTTGGTTTGTATGGGGCGTTTGGCTATGATTTGACATTTCAATTTGAG TCGATCGAGCTTCAGATGCCTCGGCCTGATAACCAACGGGATGTCGTTCT TTATATCCCTGATCGGGTGTTGGTAGTGGATCAGGATAAAAGGGCTGCGT GGCGGGTAGAGTATGACTTTAGCTGGAAGGGGCAGAGCACCCAGGGATTG CCTCGTACGGGGAGGGTGCGGGAGTATCAGCCGTTGCCCGCAGGGAGCTT GAAGAGAAATCGAGATAGTGTGGTTGGAGAGTATGCGAGGAGGGTGGAGG AGGCCAAAGGGCAGTTTAAGGTAGGGAACTTGTTTGAGGTTGTCCTGAGT CAGACATTTTTTAAAGAGTGCCCTTTGAAGCCCTCGGAGGTTTTTGCCCG CTTGCGGACGACGAACCCTTCTCCGTATGGATTCCTTATAAATTTGGGGG GTAATGAGTACTTGATTGGGGCATCTCCGGAGATGTTTGTCAGGTGTGAG AGGACGAAGGAGGGCTTGCGGGTGGAAACGTGTCCGATCTCGGGCACCAT CGCCAGGGGGAGTGATGCGCTTGAAGATGCCGCGAGGATCAAGGCCATTC TAACCAACAAGAAGGAAGAAAGTGAGTTGACCATGTGCACAGACGTGGAT CGGAATGATAAAAGTCGGATATGCGAGCCGGGGTCAGTAAGGGTACTAGG ACGACGGCAGATTGAGATGTATTCTCGGCTTATTCACACGGTGGATCACG TGGAGGGGTATTTGAGGAAAGGATTCGATGCGCTTGATGCCTTTTTATGC CACACCTGGGCAGTAACTGTGACGGGGGCGCCGAAGACGTGGGCGATTCA ATTTATCGAAGAGCAAGAGGCCTCGCCCAGGGCATGGTATGGGGGGGCGG TGGGCCTGGTTGCGTTTGATGGGAGTTTGAACACAGGGTTGACGCTGAGG ACGATTCGAGTTCTAGATGGTGTGGCGGAGGTAAGGGCAGGTGCTACTTT ATTGTATGACTCGGACCCACCTGCGGAGGAGGCGGAGACAGAGCTTAAGG CCTCAGCGCTCGTGGATGCATTGGAGTATCGGGGGCCGGGGACGGGGGAC GACGAAGGGGGAGAGGAGGTGATGCCGCCACTTGTGCCGTTGGCGAGGAG GGTGTTGTTGGTTGACCACGAGGATTCTTTCGTGCATACACTGGCCAATT ATTTGAGGCAGACGGGAGCAGAGGTTAGTACGGTACGAAGTGGAGTGAAT GCGTTGAGGCTGATTGAAGAGACGAGGCCGGATTTGGTCGTGTTGAGCCC AGGGCCTGGGTGCCCCAAGGACTTTCAGTTGTCTCAGACCATCAGTGCAG CTCTAGCTGCCAGGGTACCTGTCTTCGGGGTGTGCTTGGGGCTGCAGGGA ATGGTGGAGCATTTTGGAGGGAAATTGGATGTGCTAGCCTATCCAATGCA TGGGAAGCCGTCACATGTTGACCTCACGGCTCTTTCGGAAGCGACCGACG GCAGCAGTAGCAGTAGCAGCAGCAGCAGCAGCGCTGGTTGTAGTACGAGT AGTACCGATAGTATTAAGTTGGGGCATAAATATAAAATTTTTGAGGGAAT TCCGCAGCGGTTTGAAGTGGCGAGATATCATTCTTTGCATGGAAACCAGG CTACGTTTCCGAAGGAGTTGAGGGTGACGGCAATGAGTGAAGATGGTGTG ATAATGGGGATAGAGCACAGGGACCTGCCTTTGGCGGCCGTGCAGTTTCA CCCAGAGTCGATTCTAACCAACCCCACGCATGGGTTACGGATGCTCGCGA ATGCGTTGAAGTACTTACAATTTGAGGAGGACAAGAAGTAA back to top
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