NO09G04190.1, NO09G04190.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G04190.1
Unique NameNO09G04190.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length544
Alignment locationchr9:1251704..1252247 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1251704..1252247 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G04190.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G04190NO09G04190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G04190.1NO09G04190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G04190.1.cds1NO09G04190.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G04190.1 ID=NO09G04190.1|Name=NO09G04190.1|organism=Nannochloropsis oceanica|type=mRNA|length=544bp
ATGAGAGAGATGCCAGCTGCCGTAAGGAGCCCGCAGAATTCGTACACGAA
GACTGTGTGGGTTGTCCAGGGTGGAGAGCAAGAACGCTCTGGGTGGAGGC
TAAGAATTGGTCCAGGTGCACTCGGCCCGACTGCCTGGCGGCATGTCGGA
TGCAAATCTCGACTGACCGCGCGAAGAAGATGTCAAGAAGGCGAGCTGCT
CGGGACAGGGAGGATTCCACTGGGGCGGGTAGCCCTGAGTTGGGCGTGGG
CATTGGCAGAAATCCGGCACCGAGCCAGGCTAATGGCCGAGCGGAGCAAT
GTCTCCGCCCCTCCCACCAGGCGCGCGGGCAGGTGCCGCGTCGTGGATGT
GAGCCTCGAGATCCCACTGAATCTTCAGGGCAAGCTGCCGCCGCATATGA
CGGAACCATAGCTCAAGCCTATAGGTCTGCACGAGGACGTCGGGCTGAGC
GCGAAGAGCGCGTACCTCGGCCCCGATTTCGGCCCATGTTAACGCTGAAA
ATTCCACGATGTCGGTCGCGGCATGGATGTAGGCCGAAGAGATG
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protein sequence of NO09G04190.1

>NO09G04190.1-protein ID=NO09G04190.1-protein|Name=NO09G04190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=137bp
MREMPAAVRSPQNSYTKTVWVVQGGEQERSGWRLRIGPGALGPTAWRHVG
CKSRLTARRRCQEGELLGTGRIPLGRVALSWAWALAEIRHRARLMAERSN
VSAPPTRRAGRCRVVDVSLEIPLNLQGKLPPHMTEP*
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mRNA from alignment at chr9:1251704..1252247+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G04190.1 ID=NO09G04190.1|Name=NO09G04190.1|organism=Nannochloropsis oceanica|type=mRNA|length=544bp|location=Sequence derived from alignment at chr9:1251704..1252247+ (Nannochloropsis oceanica)
ATGAGAGAGATGCCAGCTGCCGTAAGGAGCCCGCAGAATTCGTACACGAA
GACTGTGTGGGTTGTCCAGGGTGGAGAGCAAGAACGCTCTGGGTGGAGGC
TAAGAATTGGTCCAGGTGCACTCGGCCCGACTGCCTGGCGGCATGTCGGA
TGCAAATCTCGACTGACCGCGCGAAGAAGATGTCAAGAAGGCGAGCTGCT
CGGGACAGGGAGGATTCCACTGGGGCGGGTAGCCCTGAGTTGGGCGTGGG
CATTGGCAGAAATCCGGCACCGAGCCAGGCTAATGGCCGAGCGGAGCAAT
GTCTCCGCCCCTCCCACCAGGCGCGCGGGCAGGTGCCGCGTCGTGGATGT
GAGCCTCGAGATCCCACTGAATCTTCAGGGCAAGCTGCCGCCGCATATGA
CGGAACCATAGCTCAAGCCTATAGGTCTGCACGAGGACGTCGGGCTGAGC
GCGAAGAGCGCGTACCTCGGCCCCGATTTCGGCCCATGTTAACGCTGAAA
ATTCCACGATGTCGGTCGCGGCATGGATGTAGGCCGAAGAGATG
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Coding sequence (CDS) from alignment at chr9:1251704..1252247+

>NO09G04190.1 ID=NO09G04190.1|Name=NO09G04190.1|organism=Nannochloropsis oceanica|type=CDS|length=411bp|location=Sequence derived from alignment at chr9:1251704..1252247+ (Nannochloropsis oceanica)
ATGAGAGAGATGCCAGCTGCCGTAAGGAGCCCGCAGAATTCGTACACGAA
GACTGTGTGGGTTGTCCAGGGTGGAGAGCAAGAACGCTCTGGGTGGAGGC
TAAGAATTGGTCCAGGTGCACTCGGCCCGACTGCCTGGCGGCATGTCGGA
TGCAAATCTCGACTGACCGCGCGAAGAAGATGTCAAGAAGGCGAGCTGCT
CGGGACAGGGAGGATTCCACTGGGGCGGGTAGCCCTGAGTTGGGCGTGGG
CATTGGCAGAAATCCGGCACCGAGCCAGGCTAATGGCCGAGCGGAGCAAT
GTCTCCGCCCCTCCCACCAGGCGCGCGGGCAGGTGCCGCGTCGTGGATGT
GAGCCTCGAGATCCCACTGAATCTTCAGGGCAAGCTGCCGCCGCATATGA
CGGAACCATAG
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Synonyms
Publications