NO09G03880.1, NO09G03880.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G03880.1
Unique Name	NO09G03880.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2498
Alignment location	chr9:1125573..1129756 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:1125573..1129756 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO09G03880.1 vs.
Match: EWM27416.1 (DnaJ subfamily C, member 28 [Nannochloropsis gaditana])

HSP 1 Score: 750.0 bits (1935), Expect = 7.000e-213
Identity = 405/618 (65.53%), Postives = 498/618 (80.58%), Query Frame = 0

Query:  106 MEHTTFVSHLPKQLQEYEAQLTNNSLVRDQSRLIINKNDPANRRWLSMPNLDGVGEGGYSTASYLEREALASKARLGEAQGAVYRRKAGWMGEGGREGGTGGVPEEGLSVEEKIQLSMAQGDFDDLKGKGKPLEKFDVHHYATDKTSATYMDVLAKSGVKPVWIERSLRIKEAEKRVLKRLEGEWAKVVLEIWEEEEKGKGKGGRAGGRSQWRERVLGMRCLREDLAWVNAEIDLYNLQVPSMSLQRMRLKLDHLCEAVEERVGGGGGGWTRPRQGLYYKRDKWDMNSPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKGKKKAETKPSAASSSTWNEEQARAEEGEASPIAAAAAATVTAITLASGSAAEKE-RKGGEDAAKPLTSREVAQDIYKRAGVTGFFGGVQYASLQSALEKSIYFYAYSTMKGITKLLNGGRFGVRENLIVGYLSEVIHLPVTVPLEVIITRIITSQGRVSSWAQATKELLEENGVKGLYKGITTYGVLCLKPAIQYTVFEQLRRGIISFLSRRQGVPVKALTAWQAFLLGALSRAIATLLVFPFIRVRKVLMAQSKG---RDEGGSEGGREAVADSAWVTLKATVKEEGVHGLYRG 720
            MEHTTFVSHLPKQLQ+YEA+  NN LVRDQSRLII K+DPANR+WLS+P  DG    G+STASY ERE  A KARL  A+ AV+RR+     E   EGGT G PEEG+SVEEKIQL+MAQGDFDDLKGKGKPLE+ + + YATDKTSATYMDVL+KSGVKPVW+ERS RI++AE+R++ RLE EWAKVVLE WE  E G  K G+ G  ++W+ RV+G+  LRED+AW+NAEIDLYNLQVPSMSLQRMR+ L+ +C+ V+   GG   G      G + +R+   M SPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASK K++ +++ +  +++T  +EQ  + EGE +  AAAAA   +A    SG  A +E  +G ++ +  LT+++VA++IY+RAG+ GFFGGVQY+SLQS+LEKSIYFYAYSTMKG+ K+LNGGRFGVRENL+VGYLSEV+HLPVTVP+EV++TRIITSQGR+ SW++A KE+L+E G  GLYKGI  YGVLCLKPAIQYT+FEQLRRGI+S LSRR+GVPV+AL+AWQAFLLGALSRA+ATL++FP+IRVRK+LMAQ KG    +EGG EGG+EA   +   TL+ T+++EGV GLYRG
Sbjct:    1 MEHTTFVSHLPKQLQQYEAEQVNNPLVRDQSRLIIRKDDPANRQWLSLPEFDGGDADGHSTASYFEREVAARKARLIRAERAVFRRRV--RREEVAEGGTEGTPEEGMSVEEKIQLAMAQGDFDDLKGKGKPLERLEGYLYATDKTSATYMDVLSKSGVKPVWVERSSRIRDAERRLVHRLEAEWAKVVLETWEHGE-GAEKRGKEGAMARWKSRVVGLAGLREDVAWINAEIDLYNLQVPSMSLQRMRMTLEEVCDVVQ---GGEKEG------GTWMEREA-TMASPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAAT-EDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEGGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKGVREGEEGGREGGKEA---TVLFTLQKTLRDEGVPGLYRG 601

The following BLAST results are available for this feature:

BLAST of NO09G03880.1 vs.

BLAST of NO09G03880.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27416.1	7.000e-213	65.53	DnaJ subfamily C, member 28 [Nannochloropsis gadit...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO09G03880	NO09G03880	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO09G03880.1	NO09G03880.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO09G03880.1.cds1	NO09G03880.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03880.1.cds2	NO09G03880.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03880.1.cds3	NO09G03880.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03880.1.cds4	NO09G03880.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03880.1.cds5	NO09G03880.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03880.1.cds6	NO09G03880.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03880.1.cds7	NO09G03880.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03880.1.cds8	NO09G03880.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03880.1.cds9	NO09G03880.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr9:1125573..1129756-
coding sequence from alignment at chr9:1125573..1129756-

mRNA sequence

>NO09G03880.1 ID=NO09G03880.1|Name=NO09G03880.1|organism=Nannochloropsis oceanica|type=mRNA|length=2498bp
ATGCATCACCTCCCGTGTCGCTGCAATCGGCGGGCGCGGCAAGGCTATGT
TTGGTCACAAACCCTCGGAGTCTCTTCCTCTTCGACCTCCTCCCCAACAA
CTACCACCACCACCACCACCGACGACGACGGGAAGGACACCGGAGGTGGC
CCCACCTCCTCTAATTCCTCCTTTAGCGTCGTCGCCGCCGATGTCGCCAG
CCGCCGCCCGTCGCGTCGGTTTAATGTCAGTACAAGAGGTGGGGAGGGAG
GACGAGCCAAAGTGCAAGTCTTTCGAGATCTGACCCGCAACCGCGATCCC
TCTTGGGAGCGGGCTATGGAGCATACAACATTCGTAAGCCACTTGCCTAA
ACAGCTGCAGGAATATGAGGCGCAGCTAACGAACAACTCCTTGGTGCGGG
ATCAGTCACGCTTGATCATCAATAAAAACGACCCGGCCAACAGGCGGTGG
TTGAGTATGCCGAACCTGGATGGCGTGGGGGAAGGTGGATACAGTACGGC
TAGCTACCTGGAGAGAGAGGCCTTGGCAAGTAAAGCCAGGCTGGGTGAAG
CCCAGGGGGCGGTTTATCGGCGGAAGGCGGGGTGGATGGGGGAGGGAGGG
AGGGAGGGAGGGACGGGAGGGGTGCCTGAGGAGGGGTTGAGTGTGGAAGA
GAAAATTCAGTTGAGCATGGCACAGGGGGATTTTGACGATTTAAAAGGCA
AGGGAAAGCCGTTGGAGAAATTCGACGTTCATCATTATGCGACGGACAAA
ACCAGCGCCACCTACATGGACGTGCTAGCCAAGTCAGGCGTGAAGCCCGT
GTGGATTGAGAGGTCCCTCCGGATAAAGGAGGCAGAGAAAAGGGTGTTGA
AGAGATTGGAGGGAGAGTGGGCCAAGGTGGTGTTGGAGATTTGGGAAGAG
GAGGAGAAGGGAAAAGGGAAGGGAGGGAGGGCGGGAGGGAGGTCACAGTG
GAGGGAGAGGGTCCTGGGGATGAGGTGTTTGAGGGAGGACTTGGCCTGGG
TGAATGCGGAGATTGATTTGTATAATCTACAGGTGCCCTCCATGTCCTTA
CAGCGAATGAGATTAAAGCTGGACCATTTGTGTGAGGCAGTGGAGGAGCG
AGTGGGGGGAGGGGGGGGTGGATGGACAAGACCACGGCAAGGGCTGTACT
ACAAGAGAGACAAGTGGGACATGAACTCCCCGGAGGTGCTGGCCGAAGCC
TTGTCCGCGGCAGAAGGTGGCGCCATTTCCACCGCTGTGCTTTATCCGCT
TGAGGTAATTAAGACCGTCATCCAAGCCAGCAAGGGCAAGAAAAAGGCAG
AGACAAAGCCGTCAGCTGCGAGTAGCTCGACCTGGAATGAAGAGCAAGCA
CGGGCTGAAGAAGGTGAAGCCAGCCCCATTGCTGCTGCCGCCGCTGCCAC
CGTCACTGCCATCACTCTTGCTTCTGGCAGCGCGGCGGAGAAAGAGAGGA
AGGGAGGGGAGGATGCAGCCAAGCCCTTGACAAGCCGCGAGGTGGCCCAG
GACATTTACAAGCGGGCGGGCGTGACGGGATTCTTCGGTGGGGTCCAGTA
CGCGTCGCTGCAAAGTGCGTTGGAAAAATCGATTTATTTTTATGCCTACA
GCACTATGAAGGGCATCACCAAGCTGCTGAATGGCGGCAGGTTCGGAGTG
CGTGAGAACCTGATCGTCGGATACCTGAGCGAGGTCATCCACCTGCCCGT
TACCGTCCCCCTGGAGGTGATCATCACGCGCATCATCACCAGCCAAGGCC
GCGTCTCCTCTTGGGCGCAGGCCACGAAGGAGCTGCTGGAGGAAAACGGG
GTTAAAGGCTTGTACAAAGGCATCACCACATATGGCGTCTTGTGCCTGAA
GCCAGCCATCCAGTACACGGTCTTCGAGCAGCTCCGACGGGGCATCATCT
CCTTCCTCTCGCGGCGACAAGGGGTCCCAGTCAAGGCCCTAACGGCTTGG
CAAGCTTTCCTCCTCGGTGCGCTCTCTCGGGCCATCGCCACCCTCCTCGT
CTTCCCTTTCATACGTGTCCGCAAAGTGCTCATGGCGCAAAGCAAGGGCC
GCGACGAGGGAGGGAGCGAGGGAGGGAGGGAGGCGGTGGCGGACAGTGCG
TGGGTCACCCTCAAGGCGACGGTGAAGGAGGAGGGCGTGCACGGTCTCTA
CCGAGGTGAGTCATATTGATGGACAGTGCTCTTTGCCCTCCCTCGTCATC
GCCTTCCCCCCTTCCCCTATTCCTCTGCCCTTGCGTCCTCCATCCTCATC
CCCGCCGTTTTTCCTCCCTCTTTCCTTCCTCTTTGGCTTCCTCCTCCCCT
CCCTCCCCTCCCTCCTCCTTCCCAGGCATGGCCCCGGAGCTGACCCGCGG
CATCCTGAGTGCGGCGTTAATGCTTGCGATCAAAGAGCGAATATATGCCA
TCAACAGACGCATGGTGCTGCGGTCCATGGAGGGGTAGGGAGGGAGGGGA
TAAATGATTTTTGGCAGGGGTAGGGAAGCGGGCGGATGAAGAGGGAGT

protein sequence of NO09G03880.1

>NO09G03880.1-protein ID=NO09G03880.1-protein|Name=NO09G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=723bp
MHHLPCRCNRRARQGYVWSQTLGVSSSSTSSPTTTTTTTTDDDGKDTGGG
PTSSNSSFSVVAADVASRRPSRRFNVSTRGGEGGRAKVQVFRDLTRNRDP
SWERAMEHTTFVSHLPKQLQEYEAQLTNNSLVRDQSRLIINKNDPANRRW
LSMPNLDGVGEGGYSTASYLEREALASKARLGEAQGAVYRRKAGWMGEGG
REGGTGGVPEEGLSVEEKIQLSMAQGDFDDLKGKGKPLEKFDVHHYATDK
TSATYMDVLAKSGVKPVWIERSLRIKEAEKRVLKRLEGEWAKVVLEIWEE
EEKGKGKGGRAGGRSQWRERVLGMRCLREDLAWVNAEIDLYNLQVPSMSL
QRMRLKLDHLCEAVEERVGGGGGGWTRPRQGLYYKRDKWDMNSPEVLAEA
LSAAEGGAISTAVLYPLEVIKTVIQASKGKKKAETKPSAASSSTWNEEQA
RAEEGEASPIAAAAAATVTAITLASGSAAEKERKGGEDAAKPLTSREVAQ
DIYKRAGVTGFFGGVQYASLQSALEKSIYFYAYSTMKGITKLLNGGRFGV
RENLIVGYLSEVIHLPVTVPLEVIITRIITSQGRVSSWAQATKELLEENG
VKGLYKGITTYGVLCLKPAIQYTVFEQLRRGIISFLSRRQGVPVKALTAW
QAFLLGALSRAIATLLVFPFIRVRKVLMAQSKGRDEGGSEGGREAVADSA
WVTLKATVKEEGVHGLYRGESY*

mRNA from alignment at chr9:1125573..1129756-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO09G03880.1 ID=NO09G03880.1|Name=NO09G03880.1|organism=Nannochloropsis oceanica|type=mRNA|length=4184bp|location=Sequence derived from alignment at chr9:1125573..1129756- (Nannochloropsis oceanica)
ATGCATCACCTCCCGTGTCGCTGCAATCGGCGGGCGCGGCAAGGCTATGT
TTGGTCACAAACCCTCGGAGTCTCTTCCTCTTCGACCTCCTCCCCAACAA
CTACCACCACCACCACCACCGACGACGACGGGAAGGACACCGGAGGTGGC
CCCACCTCCTCTAATTCCTCCTTTAGCGTCGTCGCCGCCGATGTCGCCAG
CCGCCGCCCGTCGCGTCGGTTTAATGTCAGTACAAGAGGTGGGGAGGGAG
GACGAGCCAAAGTGCAAGTCTTTCGAGATCTGACCCGCAACCGCGATCCC
TCTTGGGAGCGGGCTATGGAGCATACAACATTCGTAAGCCACTTGCCTAA
ACAGCTGCAGGAATATGAGGCGCAGCTAACGAACAACTCCTTGGTGCGGG
ATCAGTCACGCTTGATCATCAATAAAAACGACCCGGCCAACAGGCGGTGG
TTGAGTATGCCGAACCTGGATGGCGTGGGGGAAGGTGGATACAGTACGGC
TAGCTACCTGGAGAGAGAGGCCTTGGCAAGTAAAGCCAGGCTGGGTGAAG
CCCAGGGGGCGGTTTATCGGCGGAAGGCGGGGTGGATGGGGGAGGGAGGG
AGGGAGGGAGGGACGGGAGGGGTGCCTGAGGAGGGGTTGAGTGTGGAAGA
GAAAATTCAGTTGAGCATGGCACAGGGGGATTTTGACGATTTAAAAGGCA
AGGGAAAGCCGTTGGAGAAATTCGACGGTACGTCTGGTTGAAAGATGGGA
GGAGAGGGAGGGCGGGAGGGAGGGAGGAAGACAGGAATAATTGTTTCTAG
GTTCTGTTGTTTGCTCTCCTCGAGTGGTGGTGCAGTGGGATGCCGTTCCT
TTCTTTTACCCTTCAAAATTTGATTTCTGCGTTGTCAACTCAATTTCCCC
TTCCTCTCTCCCTCCCTCCCTCCCTTCCCTCAGTTCATCATTATGCGACG
GACAAAACCAGCGCCACCTACATGGACGTGCTAGCCAAGTCAGGCGTGAA
GCCCGTGTGGATTGAGAGGTCCCTCCGGATAAAGGAGGCAGAGAAAAGGG
TGTTGAAGAGATTGGAGGGAGAGTGGGCCAAGGTGGTGTTGGAGATTTGG
GAAGAGGAGGAGAAGGGAAAAGGGAAGGGAGGGAGGGCGGGAGGGAGGTC
ACAGTGGAGGGAGAGGGTCCTGGGGATGAGGTGTTTGAGGGAGGACTTGG
CCTGGGTGAATGCGGAGATTGATTTGTATAATCTACAGGTGCCCTCCATG
TCCTTACAGCGAATGAGATTAAAGCTGGACCATTTGTGTGAGGCAGTGGA
GGAGCGAGTGGGGGGAGGGGGGGGTGGATGGACAAGACCACGGCAAGGGC
TGTAGTGAGAGAGGGGGAGAAGGAAGGGATGTTCAGTAATGTGACAGCGC
TGGGCTCGTTGCGGCTAGAGGCGGAGGAGCTGAAGAAAACCAAGAGGAAA
GATGGGAAGGGCAGTGGTGGGGGATCGGACATCTGGGGTGGAGGTGGAAG
CCCAAGCGGGGCCAAGGCGGGGGCAGGAAGAGGAGGGGGGATGCTCGATA
CGATAACCTCGTGGTTCTCGATGGGCCAAACAAAGCCATGACCATAACAC
AGCTACAAGAGAGGTAAGATGTTTCAAAAGCAAGTAAGACATTTTGCGTA
ATGCTTATGTATTTTTGTGACCACCAGGTCTGCCTGCCAGTTACCTCCCC
ATATGAACAACGGCGGCGGGAATCCCGACTGATCTTCTCGTATTTGAACT
CCAAGCAAGTGCACCCACCACAATCAAGCATGGTTCCGTTCTCCAGCCAC
CTATCGCTCTTCTTCCTCTCTAATCACCAATCGCACCGGCAAACATCTTA
CTAGCAAGAGGCGTAGCAACACCGCTGCCGCTGTTGACCTCATATGGGCT
CTTCTTTTGGCGAGAGGCAAACTGCAACCATCATCTCATCCGCATCATTT
ACACACAACCAAACAGACAAGTGGGACATGAACTCCCCGGAGGTGCTGGC
CGAAGCCTTGTCCGCGGCAGAAGGTGGCGCCATTTCCACCGCTGTGCTTT
ATCCGCTTGAGGTAAGAAGGTGGAGGGCGGGAGGGCGGGAGGGCGGGAGG
GCGGGAGGGCAGGAGGGCGGGAGGGAACGGGGGATGAATCAGAGCTGATG
CGCATTGACATCTCCGTAAGGTGTCTAGGTAGTAGGCCCATGAATGAGTG
CCTGTATCAGTGTTGCCAGACGATCGACAAACTACCAGGGGCACCCCTTC
ACCCCTGCCATCCAAATCCCCGCCACCGCCCCCATTCTCTTTCCATCCCT
CCCTCACCCTATACCCAAAGGTAATTAAGACCGTCATCCAAGCCAGCAAG
GGCAAGAAAAAGGCAGAGACAAAGCCGTCAGCTGCGAGTAGCTCGACCTG
GAATGAAGAGCAAGCACGGGCTGAAGAAGGTGAAGCCAGCCCCATTGCTG
CTGCCGCCGCTGCCACCGTCACTGCCATCACTCTTGCTTCTGGCAGCGCG
GCGGAGAAAGAGAGGAAGGGAGGGGAGGATGCAGCCAAGCCCTTGACAAG
CCGCGAGGTGGCCCAGGACATTTACAAGCGGGCGGGCGTGACGGGATTCT
TCGGTGGGGTCCAGTACGCGTCGCTGCAAAGTGCGTTGGAAAAATCGATT
TATTTTTATGCCTACAGCACTATGAAGGGCATCACCAAGCTGCTGAATGG
CGGCAGGTACGGAGGGAGGGGGGGAGGAAGGGAAGAGAAGAAAGGAGGGC
CAAGGAAAAATTGAAGTGCAGTTGACGTATGATGATATTAGGCATTTTAT
TCATCCACACTTGACGTACCCCAAAGGTTCGGAGTGCGTGAGAACCTGAT
CGTCGGATACCTGAGCGAGGTCATCCACCTGCCCGTTACCGGTACGTGCT
ACTTGCCGTCCTGTGCAAGCCCCTCCTCCTACCATCCCTTCCCACATCTA
TTTGAATCGCCAATGCACCATCGCCAGTTACCTCTAGGCCTCCCTCCCAC
CCCTCCCACCCCTTCCTCCCTCAGTCCCCCTGGAGGTGATCATCACGCGC
ATCATCACCAGCCAAGGCCGCGTCTCCTCTTGGGCGCAGGCCACGAAGGA
GCTGCTGGAGGAAAACGGGGTTAAAGGCTTGTACAAAGGCATCACCACAT
ATGTGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGCAGGA
TTTGTGTACAATCTACTCCTGCATCCACTTGTGTGTCCGAAGAAGTCCTC
CCTTCGCGCCATACTTCCTCTGCCTCCCTCCCTCCCTCCCTCCCCCCTCT
TTTCTCTTAATCCCTACTTACAGGGCGTCTTGTGCCTGAAGCCAGCCATC
CAGTACACGGTCTTCGAGCAGCTCCGACGGGGCATCATCTCCTTCCTCTC
GCGGCGACAAGGGGGTGCGCTGGAGGGAGGGCGGGAAGGAGGGAGGGAGA
TTCATACCTAGAACACATTCTCATTTCTCAACACTTCTTCTCCCCCTCCC
TCCTTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCTCTCCCTC
CCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCCTCCAGTCCCAGTCAAGGCCCTAACGGCTTGGCAAGCTTTCCTCCT
CGGTGCGCTCTCTCGGGCCATCGCCACCCTCCTCGTCTTCCCTTTCATAC
GTGTCCGCAAAGTGCTCATGGCGCAAAGCAAGGGCCGCGACGAGGGAGGG
AGCGAGGGAGGGAGGGAGGCGGTGGCGGACAGTGCGTGGGTCACCCTCAA
GGCGACGGTGAAGGAGGAGGGCGTGCACGGTCTCTACCGAGGTGAGTCAT
ATTGATGGACAGTGCTCTTTGCCCTCCCTCGTCATCGCCTTCCCCCCTTC
CCCTATTCCTCTGCCCTTGCGTCCTCCATCCTCATCCCCGCCGTTTTTCC
TCCCTCTTTCCTTCCTCTTTGGCTTCCTCCTCCCCTCCCTCCCCTCCCTC
CTCCTTCCCAGGCATGGCCCCGGAGCTGACCCGCGGCATCCTGAGTGCGG
CGTTAATGCTTGCGATCAAAGAGCGAATATATGCCATCAACAGACGCATG
GTGCTGCGGTCCATGGAGGGGTAGGGAGGGAGGGGATAAATGATTTTTGG
CAGGGGTAGGGAAGCGGGCGGATGAAGAGGGAGT

Coding sequence (CDS) from alignment at chr9:1125573..1129756-

>NO09G03880.1 ID=NO09G03880.1|Name=NO09G03880.1|organism=Nannochloropsis oceanica|type=CDS|length=2169bp|location=Sequence derived from alignment at chr9:1125573..1129756- (Nannochloropsis oceanica)
ATGCATCACCTCCCGTGTCGCTGCAATCGGCGGGCGCGGCAAGGCTATGT
TTGGTCACAAACCCTCGGAGTCTCTTCCTCTTCGACCTCCTCCCCAACAA
CTACCACCACCACCACCACCGACGACGACGGGAAGGACACCGGAGGTGGC
CCCACCTCCTCTAATTCCTCCTTTAGCGTCGTCGCCGCCGATGTCGCCAG
CCGCCGCCCGTCGCGTCGGTTTAATGTCAGTACAAGAGGTGGGGAGGGAG
GACGAGCCAAAGTGCAAGTCTTTCGAGATCTGACCCGCAACCGCGATCCC
TCTTGGGAGCGGGCTATGGAGCATACAACATTCGTAAGCCACTTGCCTAA
ACAGCTGCAGGAATATGAGGCGCAGCTAACGAACAACTCCTTGGTGCGGG
ATCAGTCACGCTTGATCATCAATAAAAACGACCCGGCCAACAGGCGGTGG
TTGAGTATGCCGAACCTGGATGGCGTGGGGGAAGGTGGATACAGTACGGC
TAGCTACCTGGAGAGAGAGGCCTTGGCAAGTAAAGCCAGGCTGGGTGAAG
CCCAGGGGGCGGTTTATCGGCGGAAGGCGGGGTGGATGGGGGAGGGAGGG
AGGGAGGGAGGGACGGGAGGGGTGCCTGAGGAGGGGTTGAGTGTGGAAGA
GAAAATTCAGTTGAGCATGGCACAGGGGGATTTTGACGATTTAAAAGGCA
AGGGAAAGCCGTTGGAGAAATTCGACGTTCATCATTATGCGACGGACAAA
ACCAGCGCCACCTACATGGACGTGCTAGCCAAGTCAGGCGTGAAGCCCGT
GTGGATTGAGAGGTCCCTCCGGATAAAGGAGGCAGAGAAAAGGGTGTTGA
AGAGATTGGAGGGAGAGTGGGCCAAGGTGGTGTTGGAGATTTGGGAAGAG
GAGGAGAAGGGAAAAGGGAAGGGAGGGAGGGCGGGAGGGAGGTCACAGTG
GAGGGAGAGGGTCCTGGGGATGAGGTGTTTGAGGGAGGACTTGGCCTGGG
TGAATGCGGAGATTGATTTGTATAATCTACAGGTGCCCTCCATGTCCTTA
CAGCGAATGAGATTAAAGCTGGACCATTTGTGTGAGGCAGTGGAGGAGCG
AGTGGGGGGAGGGGGGGGTGGATGGACAAGACCACGGCAAGGGCTGTACT
ACAAGAGAGACAAGTGGGACATGAACTCCCCGGAGGTGCTGGCCGAAGCC
TTGTCCGCGGCAGAAGGTGGCGCCATTTCCACCGCTGTGCTTTATCCGCT
TGAGGTAATTAAGACCGTCATCCAAGCCAGCAAGGGCAAGAAAAAGGCAG
AGACAAAGCCGTCAGCTGCGAGTAGCTCGACCTGGAATGAAGAGCAAGCA
CGGGCTGAAGAAGGTGAAGCCAGCCCCATTGCTGCTGCCGCCGCTGCCAC
CGTCACTGCCATCACTCTTGCTTCTGGCAGCGCGGCGGAGAAAGAGAGGA
AGGGAGGGGAGGATGCAGCCAAGCCCTTGACAAGCCGCGAGGTGGCCCAG
GACATTTACAAGCGGGCGGGCGTGACGGGATTCTTCGGTGGGGTCCAGTA
CGCGTCGCTGCAAAGTGCGTTGGAAAAATCGATTTATTTTTATGCCTACA
GCACTATGAAGGGCATCACCAAGCTGCTGAATGGCGGCAGGTTCGGAGTG
CGTGAGAACCTGATCGTCGGATACCTGAGCGAGGTCATCCACCTGCCCGT
TACCGTCCCCCTGGAGGTGATCATCACGCGCATCATCACCAGCCAAGGCC
GCGTCTCCTCTTGGGCGCAGGCCACGAAGGAGCTGCTGGAGGAAAACGGG
GTTAAAGGCTTGTACAAAGGCATCACCACATATGGCGTCTTGTGCCTGAA
GCCAGCCATCCAGTACACGGTCTTCGAGCAGCTCCGACGGGGCATCATCT
CCTTCCTCTCGCGGCGACAAGGGGTCCCAGTCAAGGCCCTAACGGCTTGG
CAAGCTTTCCTCCTCGGTGCGCTCTCTCGGGCCATCGCCACCCTCCTCGT
CTTCCCTTTCATACGTGTCCGCAAAGTGCTCATGGCGCAAAGCAAGGGCC
GCGACGAGGGAGGGAGCGAGGGAGGGAGGGAGGCGGTGGCGGACAGTGCG
TGGGTCACCCTCAAGGCGACGGTGAAGGAGGAGGGCGTGCACGGTCTCTA
CCGAGGTGAGTCATATTGA

Synonyms

Publications