NO09G03410.1, NO09G03410.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G03410.1
Unique NameNO09G03410.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2056
Alignment locationchr9:979949..982484 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:979949..982484 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G03410.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03410NO09G03410Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G03410.1NO09G03410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G03410.1.cds1NO09G03410.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G03410.1.cds2NO09G03410.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G03410.1.cds3NO09G03410.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G03410.1 ID=NO09G03410.1|Name=NO09G03410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2056bp
GGGGGAGGGAAGACCGTTGGTGTAGAGGCATTGGTAGGAGCGGAGACCGA
GGACGAGGGCGAGGATGACGATGGCGGCCATTGAGAAGATGGCTAGTGCC
CCGATAGTGCCGACGCTGGTGAGGGTCAGGGGGGTGAGGAAGAGGGCGAG
GCCGCAGATGAGGAGTTGCTTCGCCAGGAAGGACAAGGGCTGGAGGAAGG
GAGGGAGGCAGGGAGGGAAGGAGTGAGAGAGTGAGGGAAGGAGGGAGGGA
TGGTGGTGGGGGAGGAAGGCAGGGAGGGATGGAGGGATGGTGGTGACGGA
GGTATGAGAAACTAAGAGGGGGGGAAAGTAGGGCGGGAGGAAGGAAGGCT
GGTGCGGAAAAGGAAAAGGCAAAGGGAGGGAGGAAGGAAGGGAAGGGACG
TACCTGGCCGTGCGTGATATAGGCCTCGACGAGGGGTGTCAGGAGGCCGC
GAAGGAGTATGAGGTAGGCGACAGGGGTGAGGAAGCAGATGGAGAAGACA
AGGAAGATGGTCAGCAGTTGCACAGGGGTGCCAAAAGCTTGGGAGAGGAG
GGAGGGAAGAAAGGAGGGAGGAAGGGATGAAGGGATGGAGGGAGAATGAG
AAATAAGAACAATGGCTGACCGTTACCCCATTTCTTTATTCCCTTCCATC
CCCCCTTACGCACCAGCTTTCATAACCCCCTCATAGCTCTTCTCCCCCGT
CCGCCGACTGGCCGAGATCATTGCAAAGAGGGTGAAATCCGTGGCGAGGC
AGACGAGAGCGAGACAAAGCGTGCCTATCACAGTGCCGGCTTTTTGGAAG
GAGTAGGCAAGGGAGAGAGTGCCACCGCCGACGACAGTGTTAACCAAGGA
AAAGACAGCGGGACGCAACTGGGTGGTACGTCGCTGGGAATAAAAGTCTG
GTCCGTTAAGCCCGTGGAGCTGCCGACACTCTTCCTCCTCCCGCTCCGCC
TCAGCTGCCGCATGCTCGGAGACCAACCGGGGACTGGGCGCGTTTTGGAC
AGATCTGTAATCGTTGTGGTTGGGGGCGGTGGTGCTGCCCGTGCTATTGG
TCCGAATGCTAGTGGAGAAGGTCTGCATTTCCTGGCTTTAGATGCTGTAT
GGGAGCCTGCTTGAAATAAGGCAGGGAGTGCAGGGAGGAAAGAGGGAGGA
TCGTGGTGTACGCTCACAGTACCAGGATGGCCAGGACGAGATGTTTGACG
TGCGTATCGACCTGTAGCCTGTGTGGGGGGGCACGTGGGTTTGTCTGGGC
GGCAGTATTTGTTTTTTTTCTTGAGGGCGTTGAGGTTGGCGAGAGGCGAG
GCGAGAGGAACTACATTCAATTTTTGCCATGACCACAAACCTTCAAAGCG
TCAATCCCTCACATCTCCTGCATCCCTTTATCAAGCTTGCCTTGGCACAA
ATTCCTGGCGTAAGCATAATGGCAAGATAGGGCACGATACTGCCCTCCGA
AAGGCACGTGCATCACTATTGTCATCGGAGCCACCTCACACTCCTCCCTC
CGTGCTCCACTACAGGACACATTCCGAGGAAAAAAACTGGCGCTGCATCA
TCGCAATGATCTACTCCATAATCAAGCGCATCCCGGGCAGCCAGGGCACC
AAGGTGCTAATAGGGACCACCCTGATGTTGACCGTAGGCTCCCTCCCCTT
CTGGGCCAAGCGATTCAAGAATAAGGAGAACAAGGCAGGCCACGACCTCT
TCTCGTCCGAGAAGCCCGAGGCCATCGAGCAGATGCAGGAGGAAAGGAAG
GCGAAGATCCTGACCAAGGTAACTTAAATGTGAGGAAAGACAGGAGCGTT
TTGAAGGAAGAGAGTGTACACATAGAAGCGCAACAGAGGGCGGACTGGAT
GAGATACGCGACAGCGGATGGGCAGAGGGGTTGGCAGGAGAGGAACGGGC
AAACGAAGATACAGGCGCAGTTACGATGGCTCAGGACTCTATCTCGTCTT
AAACAGACGGCGTACTACAAAATGCTTCGATGTATACATCGATGATAGCG
TACATGAGTAGCGTGGCGAACAAATGTGAAAGTAAATATCCTCAAATTGG
CTCATG
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protein sequence of NO09G03410.1

>NO09G03410.1-protein ID=NO09G03410.1-protein|Name=NO09G03410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=74bp
MIYSIIKRIPGSQGTKVLIGTTLMLTVGSLPFWAKRFKNKENKAGHDLFS
SEKPEAIEQMQEERKAKILTKVT*
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mRNA from alignment at chr9:979949..982484-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G03410.1 ID=NO09G03410.1|Name=NO09G03410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2536bp|location=Sequence derived from alignment at chr9:979949..982484- (Nannochloropsis oceanica)
GGGGGAGGGAAGACCGTTGGTGTAGAGGCATTGGTAGGAGCGGAGACCGA
GGACGAGGGCGAGGATGACGATGGCGGCCATTGAGAAGATGGCTAGTGCC
CCGATAGTGCCGACGCTGGTGAGGGTCAGGGGGGTGAGGAAGAGGGCGAG
GCCGCAGATGAGGAGTTGCTTCGCCAGGAAGGACAAGGGCTGGAGGAAGG
GAGGGAGGCAGGGAGGGAAGGAGTGAGAGAGTGAGGGAAGGAGGGAGGGA
TGGTGGTGGGGGAGGAAGGCAGGGAGGGATGGAGGGATGGTGGTGACGGA
GGTATGAGAAACTAAGAGGGGGGGAAAGTAGGGCGGGAGGAAGGAAGGCT
GGTGCGGAAAAGGAAAAGGCAAAGGGAGGGAGGAAGGAAGGGAAGGGACG
TACCTGGCCGTGCGTGATATAGGCCTCGACGAGGGGTGTCAGGAGGCCGC
GAAGGAGTATGAGGTAGGCGACAGGGGTGAGGAAGCAGATGGAGAAGACA
AGGAAGATGGTCAGCAGTTGCACAGGGGTGCCAAAAGCTTGGGAGAGGAG
GGAGGGAAGAAAGGAGGGAGGAAGGGATGAAGGGATGGAGGGAGAATGAG
AAATAAGAACAATGGCTGACCGTTACCCCATTTCTTTATTCCCTTCCATC
CCCCCTTACGCACCAGCTTTCATAACCCCCTCATAGCTCTTCTCCCCCGT
CCGCCGACTGGCCGAGATCATTGCAAAGAGGGTGAAATCCGTGGCGAGGC
AGACGAGAGCGAGACAAAGCGTGCCTATCACAGTGCCGGCTTTTTGGAAG
GAGTAGGCAAGGGAGAGAGTGCCACCGCCGACGACAGTGTTAACCAAGGA
AAAGACAGCGGGACGCAACTGGGTGGTACGTCGCTGGGAATAAAAGTCTG
GTCCGTTAAGCCCGTGGAGCTGCCGACACTCTTCCTCCTCCCGCTCCGCC
TCAGCTGCCGCATGCTCGGAGACCAACCGGGGACTGGGCGCGTTTTGGAC
AGATCTGTAATCGTTGTGGTTGGGGGCGGTGGTGCTGCCCGTGCTATTGG
TCCGAATGCTAGTGGAGAAGGTCTGCATTTCCTGGCTTTAGATGCTGTAT
GGGAGCCTGCTTGAAATAAGGCAGGGAGTGCAGGGAGGAAAGAGGGAGGA
TCGTGGTGTACGCTCACAGTACCAGGATGGCCAGGACGAGATGTTTGACG
TGCGTATCGACCTGTAGCCTGTGTGGGGGGGCACGTGGGTTTGTCTGGGC
GGCAGTATTTGTTTTTTTTCTTGAGGGCGTTGAGGTTGGCGAGAGGCGAG
GCGAGAGGAACTACATTCAATTTTTGCCATGACCACAAACCTTCAAAGCG
TCAATCCCTCACATCTCCTGCATCCCTTTATCAAGCTTGCCTTGGCACAA
ATTCCTGGCGTAAGCATAATGGCAAGATAGGGCACGATACTGCCCTCCGA
AAGGCACGTGCATCACTATTGTCATCGGAGCCACCTCACACTCCTCCCTC
CGTGCTCCACTACAGGACACATTCCGAGGAAAAAAACTGGCGCTGCATCA
TCGCAATGATCTACTCCATAATCAAGCGCATCCCGGGCAGCCAGGGCACC
AAGGTATGCAGGGTAGTGTGGCACGTTTTTGTGCTGGGCAATCAAGGCGA
CATGCGAGGGAGCGTGCGTGGGCGTCGTGTGTTGGCCTTACAAAGCACAC
GCATACGCACTGACGCTTTAACCCCTCCTTCCCGAACAGGTGCTAATAGG
GACCACCCTGATGTTGACCGTAGGCTCCCTCCCCTTCTGGGCCAAGCGAT
GTACGTACCGATGTCGAGGAGTGCCGGTTCTTCTTCCCTCCCTCCCTCCT
TGCCGTTGTGTCACCTTCCCTCTCGTGTCTATCCTACGTACAGAAAGGCC
TACACAAAGGCATTTTTTTGGAAAGAGCTGTTCTCCTTTCCGCTCTCCCA
ATCAACGTATCTCATTACAGTGTGTGGCATATGATTCGAAGAGGAGAGTA
AGGCAGGCGTCTCCCCTCCTCTCCCGTAGATACTACTCCTTTTCTTCTTA
TTGATACTGCAAAACACCCTTTGCATCCATCAACAAAACCTGCCCAGCCC
ATTGTTGTCGTATCTCCTCACTCACACCACTTTTCCTTTGACAGTCAAGA
ATAAGGAGAACAAGGCAGGCCACGACCTCTTCTCGTCCGAGAAGCCCGAG
GCCATCGAGCAGATGCAGGAGGAAAGGAAGGCGAAGATCCTGACCAAGGT
AACTTAAATGTGAGGAAAGACAGGAGCGTTTTGAAGGAAGAGAGTGTACA
CATAGAAGCGCAACAGAGGGCGGACTGGATGAGATACGCGACAGCGGATG
GGCAGAGGGGTTGGCAGGAGAGGAACGGGCAAACGAAGATACAGGCGCAG
TTACGATGGCTCAGGACTCTATCTCGTCTTAAACAGACGGCGTACTACAA
AATGCTTCGATGTATACATCGATGATAGCGTACATGAGTAGCGTGGCGAA
CAAATGTGAAAGTAAATATCCTCAAATTGGCTCATG
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Coding sequence (CDS) from alignment at chr9:979949..982484-

>NO09G03410.1 ID=NO09G03410.1|Name=NO09G03410.1|organism=Nannochloropsis oceanica|type=CDS|length=222bp|location=Sequence derived from alignment at chr9:979949..982484- (Nannochloropsis oceanica)
ATGATCTACTCCATAATCAAGCGCATCCCGGGCAGCCAGGGCACCAAGGT
GCTAATAGGGACCACCCTGATGTTGACCGTAGGCTCCCTCCCCTTCTGGG
CCAAGCGATTCAAGAATAAGGAGAACAAGGCAGGCCACGACCTCTTCTCG
TCCGAGAAGCCCGAGGCCATCGAGCAGATGCAGGAGGAAAGGAAGGCGAA
GATCCTGACCAAGGTAACTTAA
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Synonyms
Publications