NO09G03370.1, NO09G03370.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G03370.1
Unique Name	NO09G03370.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3217
Alignment location	chr9:971565..975709 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:971565..975709 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO09G03370.1 vs.
Match: EWM27479.1 (atp-binding cassette sub-family g member 2 [Nannochloropsis gaditana])

HSP 1 Score: 904.8 bits (2337), Expect = 1.900e-259
Identity = 516/787 (65.57%), Postives = 599/787 (76.11%), Query Frame = 0

Query:   44 MGPKEHQQQHSTACLPGRQENLVTLPTPSSCTISFENLVYSIPEPLTSLPRLPCPGQSRPRKSILRGLSGICKAGELTAIIGPTGGGKSTLLDALAGRKTLDSGVVLLNGQRPGADFRRLTGYCEQQDCLLGTLTVRETLQFSAELRLPASFSSSSFSYPSTSSSSSSSSSSFSSSRFKDIERAEKSKRTARIQARVSAVIKELGLDACADSLVGTQFLRGISGGEKKRTNLGRELVTAPSIIFMDEPTTGLDSQTAGTVVDILSRLAMHQNKTVVLSIHQPKFSIFKRFHSLILLHEGVVAYAGRAEKGERYFQRLGFEKEASNNPADWFVELLTTTATGAGGKGEG-ERDEETGGGVEMALRVAADKMVYEGGSEEGREEETKELVIEVQ-EGGREGSEVHKAQQRAGQQVTDMTASTTSPTTRTSFAPPSSSSSSSSSSSSSSPSSLPSSSSSSYLTDLYLQSAEYKALLSEMALLKQTPS---PSSSPSSSSLSHSSSFATTLSHQIRVLSHRTLLCSWRNPASAMMQFGAMFFFIAMIGGIYWKMDLGPQGLQNRVGAFFILIMMCMFSNISALELFIEERSVFLHEKANGCYRPAAYFWAKSLCDIVPLRVIPAVLFCAAVYPMMGMRSGLEHWALFTATVILSMLSAAALCLMVSSWIPIFAVANLGVALIFILFLITGGVLINFEQLPSWLLPFKYVSIFRYAMEILSVNELSGLVFECPEG----SPPGCVGATGDGYLALQQYPRYEDLWINFLAITAIFVLCMALTFVSLRRIKVR 822
            M  +EHQQQ   +    RQ ++ + P  +SCTISFEN+VY+IP+P  +  R    G    RK+ILRG+SGIC+AGELTAI+GPTGGGKSTLLDALAGRKTLDSG VLLNG+RPG DF+RLTGYCEQQD LLGTLTVRET++FSAELRLP +F+                             +A   +R   I+ARV+AV+KELGL+ACAD++VGTQF+RGISGGEKKRTNL RELVT P+I+FMDEPTTGLDSQTAGTVV IL+ LA  Q+KTVVLSIHQPK+SIFK FHSLILLHEG +AY GRA + E YF+RLGFE+E SNNPADWFV++L T +TG G K +G E   E G    +  R   +  V    + E   EE+K+LV+++  EGG            AG  +T+       P       PPS  SSS+SSSS+S  S+ PSSS    LT++YLQS EYKAL+ E+A LK   S   PS +PS         +ATTL HQI+VLSHRT+LC+WRNPASAMMQF AM FF+A+IGGIYWKMDLGPQGLQNR+GAFFILIMMCMFSNISALELFIEER+VF+HEKANGCYRPAAYFWAKSLCDIVPLRVIPAV FCA+VYPMMG+RSG +HW LFTATVILSML+AAALCLMVSSW+PIFAVANLGVALIFILFLITGGVLINFEQLP+WLLPFKYVSIFRYAME++SVNEL+GL FECP G     P GC+G +GD YLALQ YPR+ DLW N LAI  IFV CMALTF+SLRRI+VR
Sbjct:   20 MRREEHQQQTCASLF--RQNDVKSPPLHNSCTISFENIVYTIPKPFLAPSRPSPSGVKGRRKTILRGMSGICRAGELTAILGPTGGGKSTLLDALAGRKTLDSGEVLLNGRRPGEDFKRLTGYCEQQDFLLGTLTVRETVRFSAELRLPPTFAL----------------------------QATPGERRGEIEARVAAVVKELGLEACADTMVGTQFVRGISGGEKKRTNLARELVTDPAIVFMDEPTTGLDSQTAGTVVGILAGLATRQHKTVVLSIHQPKYSIFKLFHSLILLHEGKMAYMGRAAEAEAYFERLGFEREVSNNPADWFVDVL-TLSTGLGEKEDGKEGGREEGVAFSLPGRELVEAQVVT-LAVESEGEESKQLVLDMDVEGG------------AGLPMTESRLGGGKPGAE----PPSPPSSSASSSSAS--STPPSSSPHECLTEIYLQSPEYKALMLELAQLKGNASSLPPSPAPS------RGPYATTLLHQIKVLSHRTMLCAWRNPASAMMQFSAMLFFVALIGGIYWKMDLGPQGLQNRIGAFFILIMMCMFSNISALELFIEERAVFVHEKANGCYRPAAYFWAKSLCDIVPLRVIPAVFFCASVYPMMGLRSGFDHWLLFTATVILSMLAAAALCLMVSSWVPIFAVANLGVALIFILFLITGGVLINFEQLPAWLLPFKYVSIFRYAMEVMSVNELTGLKFECPPGVDGEVPTGCLGGSGDVYLALQHYPRFADLWKNLLAIAGIFVACMALTFLSLRRIRVR 750

The following BLAST results are available for this feature:

BLAST of NO09G03370.1 vs.

BLAST of NO09G03370.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27479.1	1.900e-259	65.57	atp-binding cassette sub-family g member 2 [Nannoc...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO09G03370	NO09G03370	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO09G03370.1	NO09G03370.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO09G03370.1.cds1	NO09G03370.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03370.1.cds2	NO09G03370.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03370.1.cds3	NO09G03370.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03370.1.cds4	NO09G03370.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G03370.1.cds5	NO09G03370.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr9:971565..975709+
coding sequence from alignment at chr9:971565..975709+

mRNA sequence

>NO09G03370.1 ID=NO09G03370.1|Name=NO09G03370.1|organism=Nannochloropsis oceanica|type=mRNA|length=3217bp
AGCTTTTGGCGCGACCTCTTTCAGCTTCCTATCATTCATCTTGGCATTTG
TCACATGAATTCTCATCGAGAGGCTGAAGGGATACTGCAAACCGATAAAA
ATGAGCGCCCCGGAAAACGTGAAAAATCGTCCGAAGGTTTTTGCCAAAAT
CACGCTTTAAAAGAACTTCAGTGATGTTTGTTCAGGACCTTTGCTGTGCC
AGCTGATTTCCAGCTTGATTCATCAAGCTCGTGATTTCCCCGGCCCAGAC
CAATTTTTTGCGGCTTTTTTTGTGCCGCGTATGTGTTTGAAACCTCTGTC
CAAATCATGGATGCTGCAGCACTCCTGTTGCTCCTGCATACTCGTACTCA
TCCCCCTCTTCAAATGCAGGCATTCTACTAGGCAGCGGCCACGCACGGCG
CTGAGCCCGATGGGTCCAAAAGAACATCAACAGCAACACTCTACTGCCTG
CCTTCCTGGGCGCCAGGAGAACTTGGTCACCCTTCCAACCCCAAGCTCCT
GCACAATTTCCTTCGAAAATCTCGTCTACTCCATCCCCGAGCCCCTTACA
TCCCTCCCTCGCCTCCCCTGCCCCGGACAAAGCCGGCCTCGTAAATCTAT
CCTCCGTGGCCTGAGTGGCATATGTAAGGCAGGGGAGCTCACCGCTATCA
TAGGCCCTACTGGGGGGGGGAAATCAACTCTCCTCGATGCGTTGGCAGGG
AGGAAGACACTAGATTCTGGTGTGGTCCTGTTGAATGGACAGCGGCCCGG
GGCGGACTTTAGACGGCTGACGGGTTATTGCGAGCAGCAGGATTGTTTGC
TTGGTACCTTGACGGTACGAGAGACCTTGCAGTTCTCGGCGGAACTGAGG
TTGCCTGCCTCGTTTTCTTCCTCCTCCTTCTCCTATCCCTCGACCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTTCTCTTCGAGTAGATTCAAGGACA
TAGAGCGTGCGGAGAAGAGCAAACGCACTGCCAGAATCCAAGCGCGTGTC
TCGGCCGTAATCAAGGAGCTAGGCTTGGACGCATGCGCTGACTCTTTGGT
GGGTACTCAATTTCTCCGCGGCATCTCAGGTGGAGAGAAAAAGAGGACCA
ACCTAGGGCGAGAGCTTGTGACGGCTCCTTCCATCATATTCATGGATGAA
CCCACCACAGGCCTGGACTCCCAAACCGCCGGCACTGTCGTGGACATCCT
CTCTCGCCTGGCAATGCACCAGAACAAAACCGTCGTCCTTTCCATCCATC
AGCCCAAATTTAGTATCTTTAAGCGCTTTCATTCCCTTATCCTCCTGCAT
GAGGGTGTGGTGGCTTACGCCGGCAGGGCAGAAAAGGGGGAGCGTTACTT
TCAACGGCTAGGGTTTGAAAAGGAGGCCAGTAATAATCCTGCAGATTGGT
TTGTGGAGCTGTTGACGACCACGGCAACGGGGGCGGGAGGGAAGGGGGAG
GGGGAAAGGGACGAAGAAACAGGCGGCGGTGTGGAGATGGCGTTGCGGGT
GGCGGCGGACAAGATGGTGTATGAAGGAGGAAGTGAGGAAGGGAGGGAAG
AAGAGACCAAGGAGCTGGTAATTGAAGTGCAGGAGGGAGGGAGGGAGGGG
TCAGAGGTGCACAAGGCACAACAGCGGGCGGGGCAGCAGGTGACCGATAT
GACAGCCTCCACGACGAGCCCCACCACCCGCACCTCCTTCGCCCCTCCCT
CCTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTCCTTCCTCC
CTCCCTTCCTCCTCCTCCTCCTCTTATCTCACTGACCTCTACCTTCAATC
TGCCGAGTACAAGGCCCTCCTCTCCGAAATGGCTCTCCTCAAACAAACCC
CCTCCCCCTCCTCCTCCCCCTCTTCCTCTTCACTCTCCCACTCCTCCTCC
TTCGCCACCACCCTCAGCCATCAAATCCGCGTCTTGTCCCACCGCACCCT
TCTCTGCTCTTGGCGGAACCCAGCGAGTGCAATGATGCAATTCGGAGCCA
TGTTCTTTTTCATCGCCATGATCGGTGGCATCTACTGGAAGATGGATCTG
GGTCCACAGGGGCTGCAGAATCGTGTGGGCGCTTTTTTCATCTTGATCAT
GATGTGCATGTTCAGCAACATCTCGGCCCTGGAGCTCTTCATCGAAGAAC
GCAGCGTCTTCCTGCACGAGAAGGCAAACGGGTGCTACCGCCCGGCGGCT
TACTTTTGGGCCAAATCATTGTGTGACATCGTCCCCTTGCGCGTCATCCC
TGCCGTGCTCTTTTGTGCAGCGGTTTATCCCATGATGGGGATGAGGAGCG
GGCTCGAGCATTGGGCTCTCTTCACGGCCACCGTTATCCTTTCCATGCTC
TCCGCCGCTGCTCTCTGTCTAATGGTCTCCTCCTGGATTCCCATTTTTGC
CGTGGCCAACCTGGGCGTGGCGTTGATCTTCATCCTCTTCCTCATCACGG
GGGGGGTGTTGATCAACTTCGAGCAGTTACCATCCTGGCTGTTGCCGTTT
AAATACGTTTCTATTTTCAGGTATGCAATGGAGATACTGAGTGTGAATGA
ATTGTCGGGGCTGGTGTTTGAGTGCCCTGAGGGGTCGCCGCCTGGCTGCG
TAGGAGCGACGGGTGATGGGTATCTGGCGTTACAACAGTACCCGCGTTAT
GAAGATCTGTGGATTAATTTTTTGGCGATCACGGCCATCTTTGTATTGTG
TATGGCCTTGACGTTCGTGAGTTTGAGGAGGATTAAGGTGAGGTAGAGGA
TGAGATAGTAGGGAGGGAGGGATTGGAGGGAGAGAGGGAAGAGGGGTAGG
AGGTAAACCTGTGCATGTATCCACGGGTGGGTTTGTGTTCGTTGTAAGAA
TTTAAAAGCGACAAGCAGGAGAGAAACTGTCCAGATTAAAGAAAGGAAAA
GGGAAGAAATTTAAAAGAATGTAAAGGGAGGGGACAATACACATATGCAT
ACACATGTCTGAGGAATCGAATTTTGCCACAAGTGGTGAGAGAAAAAGAG
AGGAGGCCAAAAGGCGGAAAGAAAGAAGAACTGTGTTTTTATTTGTACTC
CACCCGAATCCAGCCACAGTCGGCCAGAATTCATTGATAAATAGAGAAAA
GGATGAAGGTGGCGGCACTGACAACTCCCTCCGTGGGTGACGAGCTTCGA
TAGCCACTAGAGATAGTTTAGACATGGGTTTAAAAAAAGTAAGAATCGTA
TGTATTTGGGGGGTAAC

protein sequence of NO09G03370.1

>NO09G03370.1-protein ID=NO09G03370.1-protein|Name=NO09G03370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=822bp
MCLKPLSKSWMLQHSCCSCILVLIPLFKCRHSTRQRPRTALSPMGPKEHQ
QQHSTACLPGRQENLVTLPTPSSCTISFENLVYSIPEPLTSLPRLPCPGQ
SRPRKSILRGLSGICKAGELTAIIGPTGGGKSTLLDALAGRKTLDSGVVL
LNGQRPGADFRRLTGYCEQQDCLLGTLTVRETLQFSAELRLPASFSSSSF
SYPSTSSSSSSSSSSFSSSRFKDIERAEKSKRTARIQARVSAVIKELGLD
ACADSLVGTQFLRGISGGEKKRTNLGRELVTAPSIIFMDEPTTGLDSQTA
GTVVDILSRLAMHQNKTVVLSIHQPKFSIFKRFHSLILLHEGVVAYAGRA
EKGERYFQRLGFEKEASNNPADWFVELLTTTATGAGGKGEGERDEETGGG
VEMALRVAADKMVYEGGSEEGREEETKELVIEVQEGGREGSEVHKAQQRA
GQQVTDMTASTTSPTTRTSFAPPSSSSSSSSSSSSSSPSSLPSSSSSSYL
TDLYLQSAEYKALLSEMALLKQTPSPSSSPSSSSLSHSSSFATTLSHQIR
VLSHRTLLCSWRNPASAMMQFGAMFFFIAMIGGIYWKMDLGPQGLQNRVG
AFFILIMMCMFSNISALELFIEERSVFLHEKANGCYRPAAYFWAKSLCDI
VPLRVIPAVLFCAAVYPMMGMRSGLEHWALFTATVILSMLSAAALCLMVS
SWIPIFAVANLGVALIFILFLITGGVLINFEQLPSWLLPFKYVSIFRYAM
EILSVNELSGLVFECPEGSPPGCVGATGDGYLALQQYPRYEDLWINFLAI
TAIFVLCMALTFVSLRRIKVR*

mRNA from alignment at chr9:971565..975709+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO09G03370.1 ID=NO09G03370.1|Name=NO09G03370.1|organism=Nannochloropsis oceanica|type=mRNA|length=4145bp|location=Sequence derived from alignment at chr9:971565..975709+ (Nannochloropsis oceanica)
AGCTTTTGGCGCGACCTCTTTCAGCTTCCTATCATTCATCTTGGCATTTG
TCACATGAATTCTCATCGAGAGGCTGAAGGGATACTGCAAACCGATAAAA
ATGAGCGCCCCGGAAAACGTGAAAAATCGTCCGAAGGTTTTTGCCAAAAT
CACGCTTTAAAAGAACTTCAGTGATGTTTGTTCAGGACCTTTGCTGTGCC
AGCTGATTTCCAGCTTGATTCATCAAGCTCGTGATTTCCCCGGCCCAGAC
CAATTTTTTGCGGCTTTTTTTGTGCCGCGTATGTGTTTGAAACCTCTGTC
CAAATCATGGATGCTGCAGCACTCCTGTTGCTCCTGCATACTCGTACTCA
TCCCCCTCTTCAAATGCAGGCATTCTACTAGGCAGCGGCCACGCACGGCG
CTGAGCCCGATGGGTCCAAAAGAACATCAACAGCAACACTCTACTGCCTG
CCTTCCTGGGCGCCAGGAGAACTTGGTCACCCTTCCAACCCCAAGCTCCT
GCACAATTTCCTTCGAAAATCTCGGTACGTCCTCATCGAGGCCATGGGAG
TTGTGGGTGGTTGTGAGGGAGGGCTGTGCCAGGATGGAGAGACCAAAGTA
TCGACCGAGATGAAGCAGAACGGAAGAACATGTGCGTACACACATCGATT
TCAGGCCTCATCAGGCGCAAAGAGGCGTACACTCTCCCTTCATTGGACCA
TCACTCGTGCTCGGGCTCTCTCGCCGGGTGCACCACGAGAAGGCTGGGGT
TAGGCAGGGTTGGCCTGGCAGCTCCGACGGCAGCATTCCTCTCCTACCCC
TGCTCCTCCTCCTGCTCCTCACTATTTTTTCTTGTCCAGTCGCGTGCATT
ATCGTTCTCTCTGAGTTCGGTTTGAACGTTCTGGACCCCCGCTCTTCTGT
CTCTCTTCCACTCAAATACTTTCCATTCCCCTTCGTTTCTCGTCTCCCTC
TGCATTCCCTACCTCACCCCACACAACAGTCTACTCCATCCCCGAGCCCC
TTACATCCCTCCCTCGCCTCCCCTGCCCCGGACAAAGCCGGCCTCGTAAA
TCTATCCTCCGTGGCCTGAGTGGCATATGTAAGGCAGGGGAGCTCACCGC
TATCATAGGCCCTACTGGGGGGGGGAAATCAACTCTCCTCGATGCGTTGG
CAGGGAGGAAGACACTAGATTCTGGTGTGGTCCTGTTGAATGGACAGCGG
CCCGGGGCGGACTTTAGACGGCTGACGGGTTATTGCGAGCAGCAGGATTG
TTTGCTTGGTACCTTGACGGTACGAGAGACCTTGCAGTTCTCGGCGGAAC
TGAGGTTGCCTGCCTCGTTTTCTTCCTCCTCCTTCTCCTATCCCTCGACC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCTTCGAGTAGATTCAA
GGACATAGAGCGTGCGGAGAAGAGCAAACGCACTGCCAGAATCCAAGCGC
GTGTCTCGGCCGTAATCAAGGAGCTAGGCTTGGACGCATGCGCTGACTCT
TTGGTGGGTACTCAATTTCTCCGCGGCATCTCAGGTGGAGAGAAAAAGAG
GACCAACCTAGGGCGAGAGCTTGTGACGGCTCCTTCCATCATATTCATGG
ATGAACCCACCACAGGTAAGGGTACAGGAAGGGCAGGAGACGAGGGAGGG
GAGGAGGAATGGGTGTGTGAGTAAAGTGAATTTTGATTGCTTCCCCTCAT
TCCCCCCCTCCCTCCCTCCCTACCTCCCTCCCTCCTTCCCTCTTTCCTCA
GGCCTGGACTCCCAAACCGCCGGCACTGTCGTGGACATCCTCTCTCGCCT
GGCAATGCACCAGAACAAAACCGTCGTCCTTTCCATCCATCAGCCCAAAT
TTAGTATCTTTAAGCGCTTTCATTCCCTTATCCTCCTGCATGAGGGTGTG
GTGGCTTACGCCGGCAGGGCAGAAAAGGGGGAGCGTTACTTTCAACGGCT
AGGGTTTGAAAAGGAGGCCAGTAATAATCCTGCAGATTGGTTTGTGGAGC
TGTTGACGACCACGGCAACGGGGGCGGGAGGGAAGGGGGAGGGGGAAAGG
GACGAAGAAACAGGCGGCGGTGTGGAGATGGCGTTGCGGGTGGCGGCGGA
CAAGATGGTGTATGAAGGAGGAAGTGAGGAAGGGAGGGAAGAAGAGACCA
AGGAGCTGGTAATTGAAGTGCAGGAGGGAGGGAGGGAGGGGTCAGAGGTG
CACAAGGCACAACAGCGGGCGGGGCAGCAGGTGACCGATATGACAGCCTC
CACGACGAGCCCCACCACCCGCACCTCCTTCGCCCCTCCCTCCTCTTCTT
CTTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTCCTTCCTCCCTCCCTTCC
TCCTCCTCCTCCTCTTATCTCACTGACCTCTACCTTCAATCTGCCGAGTA
CAAGGCCCTCCTCTCCGAAATGGCTCTCCTCAAACAAACCCCCTCCCCCT
CCTCCTCCCCCTCTTCCTCTTCACTCTCCCACTCCTCCTCCTTCGCCACC
ACCCTCAGCCATCAAATCCGCGTCTTGTCCCACCGCACCCTTCTCTGCTC
TTGGCGGAACCCAGCGAGTGCAATGATGCAATTCGGAGCCATGTTCTTTT
TCATCGCCATGATCGGTGGCATCTACTGGAAGATGGATCTGGGTCCACAG
GGGCTGCAGAATCGTGTGGGCGCTTTTTTCATCTTGATCATGATGTGCAT
GTTCAGGTGCGAAGAAAGGGAAGGAGGGAGGGATGGAACGGAGAGGGAAG
GACGGCTTTTCCTCATGTCGCTTTCTGTGAATACAAAGAGAAAGGGATTC
GATCGAGGAGTGAGAAATAAGACGCTGACCTCTTCTTCTTCCCTCCCTCC
CTCTCCCCCTTCCTCCTTCCCCACAGCAACATCTCGGCCCTGGAGCTCTT
CATCGAAGAACGCAGCGTCTTCCTGCACGAGAAGGCAAACGGGTGCTACC
GCCCGGCGGCTTACTTTTGGGCCAAATCATTGTGTGACATCGTCCCCTTG
CGCGTCATCCCTGCCGTGCTCTTTTGTGCAGCGGTTTATCCCATGATGGG
GATGAGGAGGTGGGTCCCGGCGAGAGGAGGGAGGGAAGAAGGGAGGGGCC
TTTTCGAGGTTTTCTTTGGTGGCTTGATTTTCACTATCTCTTGTGTGTGT
CGTCTCCCTTCCACTTATCCTCTTTCTCCTTCCCTCCCTCCCTCCCACCC
TCCTTGCCTCCCTCCGAACCCCTCAGCGGGCTCGAGCATTGGGCTCTCTT
CACGGCCACCGTTATCCTTTCCATGCTCTCCGCCGCTGCTCTCTGTCTAA
TGGTCTCCTCCTGGATTCCCATTTTTGCCGTGGCCAACCTGGGCGTGGCG
TTGATCTTCATCCTCTTCCTCATCACGGGGGGGGTGTTGATCAACTTCGA
GCAGTTACCATCCTGGCTGTTGCCGTTTAAATACGTTTCTATTTTCAGGT
ATGCAATGGAGATACTGAGTGTGAATGAATTGTCGGGGCTGGTGTTTGAG
TGCCCTGAGGGGTCGCCGCCTGGCTGCGTAGGAGCGACGGGTGATGGGTA
TCTGGCGTTACAACAGTACCCGCGTTATGAAGATCTGTGGATTAATTTTT
TGGCGATCACGGCCATCTTTGTATTGTGTATGGCCTTGACGTTCGTGAGT
TTGAGGAGGATTAAGGTGAGGTAGAGGATGAGATAGTAGGGAGGGAGGGA
TTGGAGGGAGAGAGGGAAGAGGGGTAGGAGGTAAACCTGTGCATGTATCC
ACGGGTGGGTTTGTGTTCGTTGTAAGAATTTAAAAGCGACAAGCAGGAGA
GAAACTGTCCAGATTAAAGAAAGGAAAAGGGAAGAAATTTAAAAGAATGT
AAAGGGAGGGGACAATACACATATGCATACACATGTCTGAGGAATCGAAT
TTTGCCACAAGTGGTGAGAGAAAAAGAGAGGAGGCCAAAAGGCGGAAAGA
AAGAAGAACTGTGTTTTTATTTGTACTCCACCCGAATCCAGCCACAGTCG
GCCAGAATTCATTGATAAATAGAGAAAAGGATGAAGGTGGCGGCACTGAC
AACTCCCTCCGTGGGTGACGAGCTTCGATAGCCACTAGAGATAGTTTAGA
CATGGGTTTAAAAAAAGTAAGAATCGTATGTATTTGGGGGGTAAC

Coding sequence (CDS) from alignment at chr9:971565..975709+

>NO09G03370.1 ID=NO09G03370.1|Name=NO09G03370.1|organism=Nannochloropsis oceanica|type=CDS|length=2466bp|location=Sequence derived from alignment at chr9:971565..975709+ (Nannochloropsis oceanica)
ATGTGTTTGAAACCTCTGTCCAAATCATGGATGCTGCAGCACTCCTGTTG
CTCCTGCATACTCGTACTCATCCCCCTCTTCAAATGCAGGCATTCTACTA
GGCAGCGGCCACGCACGGCGCTGAGCCCGATGGGTCCAAAAGAACATCAA
CAGCAACACTCTACTGCCTGCCTTCCTGGGCGCCAGGAGAACTTGGTCAC
CCTTCCAACCCCAAGCTCCTGCACAATTTCCTTCGAAAATCTCGTCTACT
CCATCCCCGAGCCCCTTACATCCCTCCCTCGCCTCCCCTGCCCCGGACAA
AGCCGGCCTCGTAAATCTATCCTCCGTGGCCTGAGTGGCATATGTAAGGC
AGGGGAGCTCACCGCTATCATAGGCCCTACTGGGGGGGGGAAATCAACTC
TCCTCGATGCGTTGGCAGGGAGGAAGACACTAGATTCTGGTGTGGTCCTG
TTGAATGGACAGCGGCCCGGGGCGGACTTTAGACGGCTGACGGGTTATTG
CGAGCAGCAGGATTGTTTGCTTGGTACCTTGACGGTACGAGAGACCTTGC
AGTTCTCGGCGGAACTGAGGTTGCCTGCCTCGTTTTCTTCCTCCTCCTTC
TCCTATCCCTCGACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTC
TTCGAGTAGATTCAAGGACATAGAGCGTGCGGAGAAGAGCAAACGCACTG
CCAGAATCCAAGCGCGTGTCTCGGCCGTAATCAAGGAGCTAGGCTTGGAC
GCATGCGCTGACTCTTTGGTGGGTACTCAATTTCTCCGCGGCATCTCAGG
TGGAGAGAAAAAGAGGACCAACCTAGGGCGAGAGCTTGTGACGGCTCCTT
CCATCATATTCATGGATGAACCCACCACAGGCCTGGACTCCCAAACCGCC
GGCACTGTCGTGGACATCCTCTCTCGCCTGGCAATGCACCAGAACAAAAC
CGTCGTCCTTTCCATCCATCAGCCCAAATTTAGTATCTTTAAGCGCTTTC
ATTCCCTTATCCTCCTGCATGAGGGTGTGGTGGCTTACGCCGGCAGGGCA
GAAAAGGGGGAGCGTTACTTTCAACGGCTAGGGTTTGAAAAGGAGGCCAG
TAATAATCCTGCAGATTGGTTTGTGGAGCTGTTGACGACCACGGCAACGG
GGGCGGGAGGGAAGGGGGAGGGGGAAAGGGACGAAGAAACAGGCGGCGGT
GTGGAGATGGCGTTGCGGGTGGCGGCGGACAAGATGGTGTATGAAGGAGG
AAGTGAGGAAGGGAGGGAAGAAGAGACCAAGGAGCTGGTAATTGAAGTGC
AGGAGGGAGGGAGGGAGGGGTCAGAGGTGCACAAGGCACAACAGCGGGCG
GGGCAGCAGGTGACCGATATGACAGCCTCCACGACGAGCCCCACCACCCG
CACCTCCTTCGCCCCTCCCTCCTCTTCTTCTTCCTCCTCCTCCTCCTCCT
CCTCTTCTTCTCCTTCCTCCCTCCCTTCCTCCTCCTCCTCCTCTTATCTC
ACTGACCTCTACCTTCAATCTGCCGAGTACAAGGCCCTCCTCTCCGAAAT
GGCTCTCCTCAAACAAACCCCCTCCCCCTCCTCCTCCCCCTCTTCCTCTT
CACTCTCCCACTCCTCCTCCTTCGCCACCACCCTCAGCCATCAAATCCGC
GTCTTGTCCCACCGCACCCTTCTCTGCTCTTGGCGGAACCCAGCGAGTGC
AATGATGCAATTCGGAGCCATGTTCTTTTTCATCGCCATGATCGGTGGCA
TCTACTGGAAGATGGATCTGGGTCCACAGGGGCTGCAGAATCGTGTGGGC
GCTTTTTTCATCTTGATCATGATGTGCATGTTCAGCAACATCTCGGCCCT
GGAGCTCTTCATCGAAGAACGCAGCGTCTTCCTGCACGAGAAGGCAAACG
GGTGCTACCGCCCGGCGGCTTACTTTTGGGCCAAATCATTGTGTGACATC
GTCCCCTTGCGCGTCATCCCTGCCGTGCTCTTTTGTGCAGCGGTTTATCC
CATGATGGGGATGAGGAGCGGGCTCGAGCATTGGGCTCTCTTCACGGCCA
CCGTTATCCTTTCCATGCTCTCCGCCGCTGCTCTCTGTCTAATGGTCTCC
TCCTGGATTCCCATTTTTGCCGTGGCCAACCTGGGCGTGGCGTTGATCTT
CATCCTCTTCCTCATCACGGGGGGGGTGTTGATCAACTTCGAGCAGTTAC
CATCCTGGCTGTTGCCGTTTAAATACGTTTCTATTTTCAGGTATGCAATG
GAGATACTGAGTGTGAATGAATTGTCGGGGCTGGTGTTTGAGTGCCCTGA
GGGGTCGCCGCCTGGCTGCGTAGGAGCGACGGGTGATGGGTATCTGGCGT
TACAACAGTACCCGCGTTATGAAGATCTGTGGATTAATTTTTTGGCGATC
ACGGCCATCTTTGTATTGTGTATGGCCTTGACGTTCGTGAGTTTGAGGAG
GATTAAGGTGAGGTAG

Synonyms

Publications