Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr9 genome chr9:837245..841600 -
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO09G02840.1 vs.
Match: EWM27524.1 (hypothetical protein Naga_100101g7 [Nannochloropsis gaditana])
HSP 1 Score: 553.1 bits (1424), Expect = 2.500e-153
Identity = 412/928 (44.40%), Postives = 561/928 (60.45%), Query Frame = 0
Query: 540 IAFFFEEAFGVEGGLPPLTKPGRSTSSSLPSSLHALQNMLVACQEVVEGWKARPLPPSGPPSPSKKERQLQERLTALRKAVEIIVPPSSPPLPSDLLALAVKEKWLGICKAAGEGRRLQKEKNQLAAAVEKMKEETKATFGELKAMSEARDKQLVGEVSALREAVMVALVEMGAERPSLSSSSSSKASSPSSSSFSSSSSSSTSKQLAHALMQALSASKARLMEENKRLRQQDEDEEKDKEQGGHARERQT---QETTMTTTAT-----SFTLVQLLEEIYHSAHATRQHSYILQMRVAEMEARREEKEEELQRLVGQMEGLSRIEEAVGEVVEELWHHPQVGLLLAGNGNSIKNNSSSSNGLMKRKQRGKKRGGK------KEGAEDMAARLRHVVMVLTRELDGRGKDLERIWGEAMANEGTHQAAMEEVEQEVRLLRKVLQVYEEALYGALTFPSPFVEEEEGGK-IEGTEKAKKKKTMQGSRSGV--SVSGVGGAHAAVVKGNDLARRLKEHVEGLRAQVEEKMEECCEIEEARGVERREIWEEMVRWKEKAGLYLRLLTSLEEAARSVVLVGVGERGKTAAEDDKHKLNNQKKR-AEGADEAMSAISP--------LGLEVALELEQGRGMESIRALCVRLLEYGALARGARGEARQEVGRLEELLAVKEKEGRRLRETLKRQSVELVGLREKVRASYDEVTVWKERLIGQEADVSTLVSSLSRVSEKLTHLRSQGG--GIIPEGNE--WGGEVDESGDGSDVLERSDWKRLRASQLQGEEADEQSQQQQQQYDREHQQRMRQLHEEQKQEVCRLQTMAEEQAKTIEALAARNALLEEEGQEGWPEEFEHIKSAKKAVEQELHILRRGLAAREKEWAATLNAVNKERERLQRKCGKQEQAVQALAEQLDQSRGGSNVGVLHVR 1438
+AFFFE+ FG +G L P + G + SL ALQ+MLVAC+E VE WK R P PPS K+ERQ QE L LR+A+E +PPS PPL ++ LA A +EKW + +A EG L ++ ++AAA+E+ +E +A +++ AR + E+ LREAV+V LVE+G ERP+ S+SSSSKAS +SS SSS + ++ LA +L+++LSA K RL+ E + +++ E + QG R R E T AT S +LV LLE+ Y + HA +H + LQ+R +EA EKE E+ L G+++GL R+EEAV V+ +++HHP +G + NS +++GG+ +E A+DM RL+ +V L RELD R DLE +W EA + + ++AA+E+ E E+ +LRKV Q YEEAL GA EEEGG+ +EG + +KKK + + + +V G GA A + +LA R++E V+ LR + E+ M++CCE EEAR VER E+ EE +RWK KA LYLRLLTSLE+AARS+V+ GV +R K ++ K + R EGA E S L L+ ALELEQ RG SI LC +LL+Y A G+A + RL E L KE E + LR+ L +S+ L L+EK RAS++EV K ++ QEADVS+LV S+SRVSEKLTH RS G G IPE + V + DGS RS + RASQ+ ++Q+Q +Y ++E+ R+Q + EEQAKTIEAL ARNALLEEEG+EGWPEE EH+K+AK+ VEQ+L LRRGLAAREKEWAATL+AVNKERERLQRKCGKQ+QA+Q L EQ+D R + +L V+
Sbjct: 1 MAFFFEDVFGAKGRLDPRDRRGEDVEVTF--SLPALQSMLVACREEVETWKRRSSPLHRPPS--KRERQAQEHLRVLRRAMEATLPPSDPPLATEALAAAFQEKWTLMVRAVDEGEALVQDNAEMAAALEERQESARARLQQVEKDWAARVAKTKEELDILREAVVVMLVELGVERPTSSTSSSSKAS--ASSFLSSSIAGKSNSHLARSLVESLSACKTRLLLEVTKSTEEEAKEGGAEVQGAMLRGRGRDVGMEAGNTGGATGSEGSSLSLVHLLEKFYGAVHAAHRHKHGLQIR---LEASEGEKEAEVGALKGRLKGLLRLEEAVQGVLNDVFHHPVLGQFVPAGTNS-----------------SQRKGGRCVSPKTREDAQDMGLRLQQLVTALGRELDRRESDLEGVWREAESIQRKYEAALEQSESELGVLRKVSQTYEEALVGAFGSGVEEEGEEEGGQALEGDDGQRKKKQRKQKKPSLTGNVRGRTGAGEAAAQSIELAGRVREFVQKLRREQEKAMQKCCETEEARVVERTELSEESMRWKGKAALYLRLLTSLEDAARSLVVDGVKKRVKMSSPGGTKKSKALRTRNREGATEDHLGTSKHQDWPTPILSLDTALELEQSRGAGSIELLCGQLLQYSHQASRFYGDANGKAERLHESLVEKEHESQGLRKALHAKSMALADLKEKARASFEEVVRLKRKITTQEADVSSLVLSISRVSEKLTHRRSVSGPPGSIPETGHVCFEDSVGDQVDGSRHQTRS--QTARASQM-----EDQTQSLVGKY---------------QEELERMQALGEEQAKTIEALVARNALLEEEGREGWPEELEHVKAAKEVVEQQLQTLRRGLAAREKEWAATLSAVNKERERLQRKCGKQQQAMQVLTEQVDHGRIDAETEILQVK 880
The following BLAST results are available for this feature:
BLAST of NO09G02840.1 vs.
Analysis Date: 2017-10-25 (
Homology annotation for N. oceanica IMET1 )
Total hits: 1
500 1000 1500 2000 2500 3000 3500 4000 Expect = 2.50e-153 / Id = 44.40 Sequence EWM27524.1
Match Name E-value Identity Description
EWM27524.1 2.500e-153 44.40 hypothetical protein Naga_100101g7 [Nannochloropsi... [more]
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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence
>NO09G02840.1 ID=NO09G02840.1|Name=NO09G02840.1|organism=Nannochloropsis oceanica|type=mRNA|length=4356bp back to top protein sequence of NO09G02840.1
>NO09G02840.1-protein ID=NO09G02840.1-protein|Name=NO09G02840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1452bp back to top mRNA from alignment at chr9:837245..841600-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G02840.1 ID=NO09G02840.1|Name=NO09G02840.1|organism=Nannochloropsis oceanica|type=mRNA|length=4356bp|location=Sequence derived from alignment at chr9:837245..841600- (Nannochloropsis oceanica)ATGCTGTCGGCTTCATCCCCTGTTTCTCCCGCGGGCAGAGCCGACAACAC
TTTCCCGGGGAGTAAGACACCACTTCATTCCAAGAGTTGGGGGAGCGGGG
CAAGCCGCAGCTGCCGCAGCACCACTTCTACCCACCACCAGGGCACCGGC
AGCTCATTAGCGCCGTTTAAAGATGCCAAGGCCTGCTTTGAAGCGGAGCG
CGCGCCCTTGCTAAAAGACATCGAGGGATTGCGAAGGATGCTTCAGCAAA
AGGACACGGACCATACACGGCAAGTCGCCCGAGCAGTCGAGATGGAACAG
GCGCTGCGATCCCAGGTACAACTGTACAAGAGCAAGTTAGAGAAAGCCTT
GGCAGGGAAGAAGCAGATGGAGGTGGTGGTTGGCAAGCAAAAGTATGGCC
AGGCGTGTAGTTGTGGCGGCAAGGACGATGCCCGTGTAAAGCGTTGGCAT
CAGGAGCGGGAGGCAAGCGAGCAGGAGAAAGAGGTGTTGCGGTCCTCCAT
CAGTAGCTTGGAGATGCGGTGTGTGAAACTGGAGGAGGAAAAGGCAGAAA
TGGAGAAAGAGGCGCAAGAGTGCTTAGATCGAGCAGGGAGGGAAATTGAA
GAATTAAGAGCACGGGAGGAGGAGCTGAAGCAATGGCTGGAAACGACGGG
TTTGGAGCGAGCAGCGATGGTAGAGTTGCTAAGGAATGGAAGTCAGCAGT
GCCGGGCTGTTTTGGCGGCGGCAGAGCTGGGAGGAAGGGGTGAAGGGGAA
GGGTCGAGAACAACGACCGCTGGTAGTGGGGTGGGTGCCGGGAGGTCTCT
CGTAACGGTGGCGCAACGAAGGGTGCATCTGGAGAAGGTCAAGAGCTTGC
AGAAGGAGTTCGTGGAGATGCTGGGCAGGTTGGAAGAAATACCATGTCTC
GCAGAAGATGCCCCTTCGATGCCGGAGCGGTTTTGTCGTGACGAAAAGAA
GGAGCAGCAGCAGCAGCAAGGACAGAGAGCAAGGCGCTTTGCGGAAGAGG
AGGAAGAAGATGAGGAGGACGAGGAAGAGGTGAAGGAAGGGAAGAGGATG
TTAAAGGAGAGAAGTGCCAAGTACGAGGCATTTCAACGCGAAAAATCAGC
ACTACAAGCCGAGCTCGCGCAACTGAAAGGGGGTCCCACCACCAAGAAGG
AGCAGCAGCAGCAGCAGCAGCAGTTCCCTTCGCAGGCCGAGTTGTTGGAA
AGGGATAACAGATTGATGCATGATCGGCTCGAAGGGGTTTTGTCCGGTGC
TCTCTCTCGTTCACTTCGAGCAGAACAAGGAGGAGAAGAAGATCAAGAAG
AAGATCGAGGAGGAGTAGGAGGAGGAGATGAAGGAGGAGGAAGGTTACCT
GTTTTGGAAGAAGCTGAAAAGCTCTTGACGCAGGCAGCTAGTCGTTTCTA
TGCTTTGGCAACCCGGTTGCAAGAAAAGGAGGAGGAGGAGGAGGAGGAGA
AGGAGAAGGAGAAGGAGGGGGCCGGAACGGGGAGGGAGGGACGGAGGGAG
GGCGGAAGTGGGTTGGTGCCGATGGTGCAAGCGTTTGGACGGGAGTTGGC
TCATCTTCGTCGACTACTGACGGCGTCTGAACACCTCGCACTCAATCACC
AGGAAGAGCGGGAATGCATCGCCTTTTTCTTCGAGGAAGCTTTTGGGGTT
GAAGGGGGGCTGCCCCCTTTGACAAAGCCAGGACGCAGCACCTCGTCCTC
CCTCCCTTCATCCCTTCACGCCTTACAGAATATGTTGGTTGCTTGTCAGG
AGGTGGTGGAAGGCTGGAAGGCACGCCCCCTCCCTCCCTCGGGCCCTCCC
TCCCCCAGCAAGAAAGAACGGCAGTTGCAAGAGCGATTAACCGCGCTTCG
GAAAGCTGTAGAGATCATAGTCCCTCCTTCCAGCCCTCCCCTTCCCAGCG
ACCTTCTTGCCTTGGCCGTCAAGGAAAAATGGCTAGGCATATGTAAGGCC
GCAGGGGAGGGGAGAAGGCTGCAGAAAGAGAAAAATCAGCTTGCAGCAGC
TGTAGAGAAGATGAAGGAAGAGACAAAAGCAACCTTTGGGGAGTTGAAAG
CAATGAGTGAAGCTCGGGATAAGCAATTGGTCGGGGAGGTCTCGGCGCTC
CGAGAAGCTGTGATGGTGGCTTTGGTGGAGATGGGTGCGGAACGGCCCTC
TTTGTCCTCTTCCTCCTCTTCTAAGGCATCTTCGCCGTCCTCCTCCTCTT
TCTCCTCCTCCTCCTCCTCCTCAACCTCCAAGCAGTTGGCGCATGCATTG
ATGCAGGCCCTCTCGGCGAGCAAGGCACGTTTAATGGAAGAGAATAAACG
TCTGCGGCAGCAGGATGAAGATGAGGAAAAAGATAAGGAGCAGGGCGGCC
ATGCAAGAGAGAGGCAGACTCAGGAAACGACGATGACGACGACAGCCACG
AGCTTCACCCTGGTGCAGCTTCTCGAAGAAATTTATCATTCTGCGCACGC
CACGCGGCAGCATTCCTACATTCTACAAATGCGTGTGGCGGAGATGGAGG
CAAGGAGAGAGGAGAAGGAGGAGGAGCTCCAGAGGCTTGTGGGCCAGATG
GAAGGCTTGAGTCGGATAGAAGAGGCCGTAGGGGAGGTCGTCGAGGAGTT
GTGGCATCACCCGCAGGTGGGATTATTGCTTGCCGGGAACGGTAACAGCA
TCAAGAATAATAGTAGCAGCAGCAACGGTCTTATGAAGAGAAAGCAGCGG
GGTAAGAAGAGGGGCGGGAAGAAGGAGGGGGCAGAGGATATGGCTGCACG
TTTGCGGCATGTGGTGATGGTGCTGACAAGAGAGTTGGACGGACGGGGAA
AGGATTTAGAGAGAATCTGGGGGGAGGCAATGGCGAATGAGGGGACACAT
CAGGCAGCGATGGAGGAGGTGGAGCAAGAGGTGCGATTGTTGAGGAAGGT
GCTGCAAGTGTATGAAGAAGCTTTGTACGGCGCCCTTACTTTTCCTTCTC
CGTTTGTGGAGGAAGAAGAGGGGGGGAAGATAGAAGGGACAGAAAAAGCG
AAGAAAAAGAAGACAATGCAGGGTAGTAGGAGTGGGGTGTCTGTGAGTGG
AGTGGGAGGGGCGCATGCTGCGGTGGTGAAAGGGAACGACTTGGCCCGCC
GACTGAAGGAGCACGTGGAAGGGTTGCGAGCACAAGTGGAAGAGAAGATG
GAGGAATGTTGTGAAATTGAAGAGGCAAGGGGGGTGGAGAGGCGGGAGAT
ATGGGAGGAGATGGTGCGGTGGAAGGAGAAGGCAGGGTTGTACTTGCGGT
TGTTGACGTCCTTGGAGGAGGCGGCACGGAGTGTGGTGCTGGTAGGGGTG
GGAGAAAGGGGGAAGACGGCCGCAGAGGATGATAAACATAAATTAAATAA
TCAGAAGAAAAGAGCGGAAGGAGCGGACGAGGCGATGAGTGCAATCTCTC
CGTTGGGATTGGAGGTGGCGCTGGAGCTGGAGCAGGGGAGGGGGATGGAG
AGTATCAGGGCGTTGTGTGTGCGACTGCTAGAATACGGTGCGCTGGCGAG
GGGGGCAAGGGGTGAGGCCCGTCAGGAGGTGGGACGGTTGGAGGAGCTGT
TGGCAGTGAAGGAGAAGGAGGGGAGGAGGTTGCGGGAGACCTTGAAAAGG
CAGAGTGTGGAGCTGGTGGGGTTGAGGGAGAAGGTGCGGGCGTCTTATGA
TGAGGTGACGGTGTGGAAGGAGAGGCTTATTGGGCAAGAGGCGGATGTGT
CGACGTTGGTTTCGAGCTTGAGTCGCGTGTCGGAAAAGTTGACGCATTTA
AGGTCGCAGGGGGGGGGGATAATTCCGGAGGGAAATGAGTGGGGAGGTGA
GGTGGATGAAAGTGGTGATGGTAGTGATGTGTTGGAGAGGAGCGACTGGA
AAAGACTGCGTGCTTCGCAACTGCAAGGGGAGGAGGCTGACGAGCAGTCG
CAGCAGCAGCAGCAGCAGTATGACCGAGAACACCAGCAACGGATGCGGCA
GCTGCATGAGGAGCAGAAGCAAGAAGTGTGTCGTTTGCAAACCATGGCGG
AGGAGCAGGCGAAGACCATCGAGGCCCTTGCTGCGCGGAATGCTTTGCTT
GAGGAGGAAGGACAAGAGGGCTGGCCGGAGGAATTTGAGCATATTAAGTC
GGCGAAGAAAGCGGTGGAACAGGAGCTTCATATTCTAAGGCGCGGTTTGG
CGGCAAGGGAGAAGGAGTGGGCGGCTACTTTGAATGCGGTCAACAAAGAG
AGGGAGAGGTTGCAGCGGAAGTGTGGAAAGCAGGAGCAAGCGGTACAGGC
TTTGGCAGAGCAATTGGATCAGAGCCGTGGTGGATCGAATGTCGGTGTTC
TTCACGTGCGAGGGGAGGAGAGGGAAGAGAAGATGGAGGCAGAGGATGGA
ATGTGA back to top Coding sequence (CDS) from alignment at chr9:837245..841600-
>NO09G02840.1 ID=NO09G02840.1|Name=NO09G02840.1|organism=Nannochloropsis oceanica|type=CDS|length=4356bp|location=Sequence derived from alignment at chr9:837245..841600- (Nannochloropsis oceanica) back to top