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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr9 | genome | chr9:722996..725539 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO09G02410.1 vs.
Match: EWM27557.1 (kinesin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 783.9 bits (2023), Expect = 4.000e-223 Identity = 435/653 (66.62%), Postives = 517/653 (79.17%), Query Frame = 0
Query: 10 RGIIPNSFQHIFERVAVLENQEFLVRASYLEIYNEEIRDLLSKDPRNKLDLKEHPDRGVYVKDLTTFVVKNAEEIGKVMQAGKRNRSTGATLMNQNSSRSHSVFTIIIEC--CDNSGKCLGSDTSSKHQQDNSQQQTIRVGKLNLVDLAGSERQSKAGTTGERFKEATKINLSLSALGNVITALVDGRAQHVPYRDSKLTRLLQSSLGGNTKTVMCANCGPADYNYDETLSTLRYANRAKNIKNKPHVNEDPKDTMLREFKEEILRLKAQLAAQDKLSSGLGGSGTLAVGLVLDGTAQAKEEN-FRANYHKLYKYGNGGNERWREVAVRAEKEKEELKSQAKRDMDALQSKSSEEKEALRQRLLKEAEDRRVLESKLLAMEAKLIQGGESVDRANHDKLMRKAKGEVDAQQQHQRRLAQELAIKEETHLVLEEEYSSLQEEVDAKTRKLQRLISKYRGATRENQDLQAEFQQEREDLLETVRQLTQQLKLKDLVVQNFIPPEIAMTIEQRATWSEERDAWTVPFLRYAGNNLKRVNLKRPVASPSSRRPETQYARARRNQDTDMRFRVDNLLDVELDMDDGAPPLQHYGDAVAAGAGVEAEAYPPLVLRVLDMSLDEDGIVPNEDEEEEEENLDPFPPLSPYLRYADHHYEPS 660
+GIIPNSFQHIF+RVAV NQ+FLVRASYLEIYNEEIRDLLSKDPRNKL+LKEHPD G +VKDL T +V+N EI +VMQ GKRNRSTGATLMNQ SSRSHSVFT+I+EC D G S + QQQ I+VGKLNLVDLAGSERQ K G+TG+RFKEATKINLSLSALGNVI+ALVDGRA H+PYR SKLTRLLQSSLGGNTKTVMCANCGPADYNYDETLSTLRYANRAK+IKNKPH+NEDPKDTMLREF++EI RLK QLAAQDK ++ GS + LD +AQ+K + F+ + G+G ++ ++ +AEK+KE+ K QAKR++DALQSKS EEKEAL+QRL+KE EDRR+LE KL AMEAKLIQGG +DR + +R+A G++D QQQ QRRLAQELAIKEE +LVLE++YSSLQEEV AKTRKL+RL+ KYR ATRE QDLQ+EFQ+EREDLLET+R+LT+QLKLKD+VV+ F+PPEIA I++RA W+EE+DAWT+ L GNNL+ V+L+R VASP+SRRPETQ+ARA+R D D FR DNLLD+ELDM+DGAPPLQHY DAV E ++ PL R+L+ S +G D +++ E FP SPYLRYADH + S
Sbjct: 141 KGIIPNSFQHIFDRVAVSVNQQFLVRASYLEIYNEEIRDLLSKDPRNKLELKEHPDSGAFVKDLRTILVRNVAEINRVMQTGKRNRSTGATLMNQASSRSHSVFTVIVECGAIDEDGSHAFPSNGS-----DKQQQIIQVGKLNLVDLAGSERQGKTGSTGDRFKEATKINLSLSALGNVISALVDGRAHHIPYRYSKLTRLLQSSLGGNTKTVMCANCGPADYNYDETLSTLRYANRAKSIKNKPHINEDPKDTMLREFRDEICRLKEQLAAQDKSAAVRVGSS-----ITLDSSAQSKNDGEFKEDRQN---NGSGTEKQLQKAVAKAEKDKEDFKFQAKRELDALQSKSLEEKEALKQRLMKETEDRRILEQKLFAMEAKLIQGGTLLDRTHQHDQLRQANGQMDEQQQKQRRLAQELAIKEEANLVLEDQYSSLQEEVAAKTRKLERLVGKYRSATREVQDLQSEFQREREDLLETIRELTRQLKLKDMVVEYFVPPEIATKIKERAIWNEEQDAWTMSSLHLTGNNLQHVDLRRRVASPTSRRPETQFARAQRLHDKDPAFRADNLLDLELDMEDGAPPLQHYSDAVKK---KEKDSLLPL-QRILNPS---NGTETPPDFDKDGEKTILFPVSSPYLRYADHVQQAS 773
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G02410.1 ID=NO09G02410.1|Name=NO09G02410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2544bp
TATCCTTTTAGGACATAACGAGATGGAAGATGGCGTGCATTGTTCAATTT
TCAATCTCCTTTTTTCCTATCTCTATTCTGTCATCATACTAGCACTGGCA
AAACGCATACCATGGAAGGCACAGCAACATCGGAGGGGCGCGGCATCATC
CCCAATTCCTTCCAGCATATCTTTGAGCGTGTCGCCGTATTAGAGAATCA
AGAGTTCCTGGTTCGAGCGTCCTACCTAGAAATTTACAACGAAGAAATCC
GGGACTTGCTGTCCAAGGATCCCCGGAACAAGCTGGACCTGAAGGAGCAC
CCGGATCGCGGGGTGTATGTTAAGGACCTTACGACATTTGTGGTGAAAAA
TGCCGAAGAGATTGGCAAGGTTATGCAGGCAGGAAAACGCAATCGTTCAA
CTGGAGCTACGCTCATGAACCAGAACTCGTCTCGATCGCATTCTGTCTTT
ACCATCATTATCGAGTGCTGCGACAACAGTGGGAAATGTTTGGGCAGTGA
TACGTCATCCAAGCATCAACAAGACAACTCCCAACAGCAAACTATCCGGG
TGGGCAAGCTTAATCTTGTGGACCTGGCAGGAAGCGAGCGACAAAGCAAA
GCAGGTACCACGGGAGAGCGTTTCAAGGAGGCAACCAAGATCAACCTTTC
GTTGTCGGCGCTGGGCAACGTCATCACGGCTCTCGTGGACGGCCGGGCGC
AGCATGTGCCCTACCGTGATTCTAAGCTCACACGGCTTCTGCAATCATCG
CTGGGTGGGAACACCAAGACAGTCATGTGCGCCAATTGTGGGCCTGCAGA
TTATAATTACGACGAAACCCTCTCCACGCTCCGGTACGCCAACCGCGCCA
AGAACATCAAAAACAAACCACACGTGAATGAAGATCCCAAAGACACCATG
CTTCGAGAGTTCAAAGAAGAAATTCTACGCCTGAAGGCTCAGCTTGCTGC
GCAAGACAAGCTCTCCTCCGGGCTCGGAGGTTCTGGAACCCTCGCGGTTG
GCTTGGTGTTGGATGGCACAGCACAAGCGAAGGAAGAGAATTTTAGGGCC
AATTACCACAAGCTGTACAAATACGGTAACGGAGGCAACGAGCGATGGCG
AGAGGTGGCTGTCAGGGCGGAGAAGGAAAAAGAGGAGCTGAAGTCCCAGG
CTAAACGGGACATGGATGCCCTGCAAAGCAAGTCGTCGGAGGAAAAAGAA
GCTCTGCGGCAGCGGCTTCTCAAAGAGGCCGAAGATCGGCGCGTGCTCGA
AAGCAAGCTACTTGCCATGGAAGCCAAATTGATTCAGGGTGGGGAGTCTG
TAGACAGGGCAAACCACGACAAACTTATGAGAAAAGCCAAGGGTGAAGTG
GACGCGCAGCAGCAACATCAGCGACGGCTGGCCCAGGAACTTGCCATCAA
GGAGGAAACGCACCTGGTCTTGGAAGAAGAATACTCGAGTTTGCAAGAAG
AGGTGGACGCCAAGACCCGAAAACTCCAGAGGCTCATTTCCAAGTATCGC
GGGGCCACACGCGAGAACCAGGACCTGCAAGCGGAGTTTCAGCAGGAGCG
CGAGGACTTGCTCGAAACGGTTCGACAATTGACGCAGCAGCTGAAGCTTA
AGGATCTTGTGGTGCAGAACTTTATCCCTCCCGAGATTGCAATGACGATA
GAGCAGCGTGCTACATGGAGCGAAGAACGGGATGCATGGACTGTGCCATT
TTTGAGGTACGCCGGCAACAACTTGAAGAGAGTAAACTTGAAGCGGCCGG
TCGCATCTCCCTCGTCCCGGCGACCTGAGACGCAGTATGCCCGAGCTAGG
CGGAATCAGGACACGGACATGCGGTTTAGGGTAGATAATCTGTTGGACGT
GGAACTTGACATGGACGACGGAGCACCCCCATTGCAGCACTACGGTGACG
CGGTGGCGGCGGGTGCTGGTGTGGAAGCAGAAGCATATCCGCCACTGGTC
CTGAGGGTCTTAGACATGTCCTTGGACGAAGATGGGATTGTACCCAATGA
AGATGAGGAAGAAGAGGAGGAGAATCTAGACCCGTTTCCTCCCTTGTCGC
CCTATTTGCGGTATGCGGACCACCATTATGAACCGTCGATGGCTGCGACT
GCTGCCGCGAATGAAAGGAGATAGGGAAACGAACCTCTGCGAAGTCTTTT
TTTGGCATTCAAATAAAAGGGACCGGAAAATTGAGTGTTCTTATTCGATA
CGATAACCTTTGTGTATTTTTGTTCCATATTGTTAGCGGCTGCTGGAGAT
ACAGTGCGCTTGCTATTGGTGGCGCGCGCGCGTTTTCAAAATAATCTCCG
ATCACAGTCAGAGGAAGGGGTGCCCTGGTAGAATCATTAAACATTAAATT
GTAATACACATACCAGCGTCTGAGAGGCGTCTCCTTTGTCTGGGTGGGGG
AGTTTGATTGCCTCAAGGTCGAGGGGATTCCTTTTTGTCTGACTAGCAGG
TGCGCATGTGACCAGCAGATCACATAAACTCTGAAAGTCCTTAGCAGCAC
TCTTGTGTCGCCCTAGACGAATTTGATCCTGCACAAAATAGGCA back to topprotein sequence of NO09G02410.1 >NO09G02410.1-protein ID=NO09G02410.1-protein|Name=NO09G02410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=671bp
MEGTATSEGRGIIPNSFQHIFERVAVLENQEFLVRASYLEIYNEEIRDLL
SKDPRNKLDLKEHPDRGVYVKDLTTFVVKNAEEIGKVMQAGKRNRSTGAT
LMNQNSSRSHSVFTIIIECCDNSGKCLGSDTSSKHQQDNSQQQTIRVGKL
NLVDLAGSERQSKAGTTGERFKEATKINLSLSALGNVITALVDGRAQHVP
YRDSKLTRLLQSSLGGNTKTVMCANCGPADYNYDETLSTLRYANRAKNIK
NKPHVNEDPKDTMLREFKEEILRLKAQLAAQDKLSSGLGGSGTLAVGLVL
DGTAQAKEENFRANYHKLYKYGNGGNERWREVAVRAEKEKEELKSQAKRD
MDALQSKSSEEKEALRQRLLKEAEDRRVLESKLLAMEAKLIQGGESVDRA
NHDKLMRKAKGEVDAQQQHQRRLAQELAIKEETHLVLEEEYSSLQEEVDA
KTRKLQRLISKYRGATRENQDLQAEFQQEREDLLETVRQLTQQLKLKDLV
VQNFIPPEIAMTIEQRATWSEERDAWTVPFLRYAGNNLKRVNLKRPVASP
SSRRPETQYARARRNQDTDMRFRVDNLLDVELDMDDGAPPLQHYGDAVAA
GAGVEAEAYPPLVLRVLDMSLDEDGIVPNEDEEEEEENLDPFPPLSPYLR
YADHHYEPSMAATAAANERR* back to topmRNA from alignment at chr9:722996..725539- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G02410.1 ID=NO09G02410.1|Name=NO09G02410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2544bp|location=Sequence derived from alignment at chr9:722996..725539- (Nannochloropsis oceanica)
TATCCTTTTAGGACATAACGAGATGGAAGATGGCGTGCATTGTTCAATTT
TCAATCTCCTTTTTTCCTATCTCTATTCTGTCATCATACTAGCACTGGCA
AAACGCATACCATGGAAGGCACAGCAACATCGGAGGGGCGCGGCATCATC
CCCAATTCCTTCCAGCATATCTTTGAGCGTGTCGCCGTATTAGAGAATCA
AGAGTTCCTGGTTCGAGCGTCCTACCTAGAAATTTACAACGAAGAAATCC
GGGACTTGCTGTCCAAGGATCCCCGGAACAAGCTGGACCTGAAGGAGCAC
CCGGATCGCGGGGTGTATGTTAAGGACCTTACGACATTTGTGGTGAAAAA
TGCCGAAGAGATTGGCAAGGTTATGCAGGCAGGAAAACGCAATCGTTCAA
CTGGAGCTACGCTCATGAACCAGAACTCGTCTCGATCGCATTCTGTCTTT
ACCATCATTATCGAGTGCTGCGACAACAGTGGGAAATGTTTGGGCAGTGA
TACGTCATCCAAGCATCAACAAGACAACTCCCAACAGCAAACTATCCGGG
TGGGCAAGCTTAATCTTGTGGACCTGGCAGGAAGCGAGCGACAAAGCAAA
GCAGGTACCACGGGAGAGCGTTTCAAGGAGGCAACCAAGATCAACCTTTC
GTTGTCGGCGCTGGGCAACGTCATCACGGCTCTCGTGGACGGCCGGGCGC
AGCATGTGCCCTACCGTGATTCTAAGCTCACACGGCTTCTGCAATCATCG
CTGGGTGGGAACACCAAGACAGTCATGTGCGCCAATTGTGGGCCTGCAGA
TTATAATTACGACGAAACCCTCTCCACGCTCCGGTACGCCAACCGCGCCA
AGAACATCAAAAACAAACCACACGTGAATGAAGATCCCAAAGACACCATG
CTTCGAGAGTTCAAAGAAGAAATTCTACGCCTGAAGGCTCAGCTTGCTGC
GCAAGACAAGCTCTCCTCCGGGCTCGGAGGTTCTGGAACCCTCGCGGTTG
GCTTGGTGTTGGATGGCACAGCACAAGCGAAGGAAGAGAATTTTAGGGCC
AATTACCACAAGCTGTACAAATACGGTAACGGAGGCAACGAGCGATGGCG
AGAGGTGGCTGTCAGGGCGGAGAAGGAAAAAGAGGAGCTGAAGTCCCAGG
CTAAACGGGACATGGATGCCCTGCAAAGCAAGTCGTCGGAGGAAAAAGAA
GCTCTGCGGCAGCGGCTTCTCAAAGAGGCCGAAGATCGGCGCGTGCTCGA
AAGCAAGCTACTTGCCATGGAAGCCAAATTGATTCAGGGTGGGGAGTCTG
TAGACAGGGCAAACCACGACAAACTTATGAGAAAAGCCAAGGGTGAAGTG
GACGCGCAGCAGCAACATCAGCGACGGCTGGCCCAGGAACTTGCCATCAA
GGAGGAAACGCACCTGGTCTTGGAAGAAGAATACTCGAGTTTGCAAGAAG
AGGTGGACGCCAAGACCCGAAAACTCCAGAGGCTCATTTCCAAGTATCGC
GGGGCCACACGCGAGAACCAGGACCTGCAAGCGGAGTTTCAGCAGGAGCG
CGAGGACTTGCTCGAAACGGTTCGACAATTGACGCAGCAGCTGAAGCTTA
AGGATCTTGTGGTGCAGAACTTTATCCCTCCCGAGATTGCAATGACGATA
GAGCAGCGTGCTACATGGAGCGAAGAACGGGATGCATGGACTGTGCCATT
TTTGAGGTACGCCGGCAACAACTTGAAGAGAGTAAACTTGAAGCGGCCGG
TCGCATCTCCCTCGTCCCGGCGACCTGAGACGCAGTATGCCCGAGCTAGG
CGGAATCAGGACACGGACATGCGGTTTAGGGTAGATAATCTGTTGGACGT
GGAACTTGACATGGACGACGGAGCACCCCCATTGCAGCACTACGGTGACG
CGGTGGCGGCGGGTGCTGGTGTGGAAGCAGAAGCATATCCGCCACTGGTC
CTGAGGGTCTTAGACATGTCCTTGGACGAAGATGGGATTGTACCCAATGA
AGATGAGGAAGAAGAGGAGGAGAATCTAGACCCGTTTCCTCCCTTGTCGC
CCTATTTGCGGTATGCGGACCACCATTATGAACCGTCGATGGCTGCGACT
GCTGCCGCGAATGAAAGGAGATAGGGAAACGAACCTCTGCGAAGTCTTTT
TTTGGCATTCAAATAAAAGGGACCGGAAAATTGAGTGTTCTTATTCGATA
CGATAACCTTTGTGTATTTTTGTTCCATATTGTTAGCGGCTGCTGGAGAT
ACAGTGCGCTTGCTATTGGTGGCGCGCGCGCGTTTTCAAAATAATCTCCG
ATCACAGTCAGAGGAAGGGGTGCCCTGGTAGAATCATTAAACATTAAATT
GTAATACACATACCAGCGTCTGAGAGGCGTCTCCTTTGTCTGGGTGGGGG
AGTTTGATTGCCTCAAGGTCGAGGGGATTCCTTTTTGTCTGACTAGCAGG
TGCGCATGTGACCAGCAGATCACATAAACTCTGAAAGTCCTTAGCAGCAC
TCTTGTGTCGCCCTAGACGAATTTGATCCTGCACAAAATAGGCA back to topCoding sequence (CDS) from alignment at chr9:722996..725539- >NO09G02410.1 ID=NO09G02410.1|Name=NO09G02410.1|organism=Nannochloropsis oceanica|type=CDS|length=2013bp|location=Sequence derived from alignment at chr9:722996..725539- (Nannochloropsis oceanica)
ATGGAAGGCACAGCAACATCGGAGGGGCGCGGCATCATCCCCAATTCCTT
CCAGCATATCTTTGAGCGTGTCGCCGTATTAGAGAATCAAGAGTTCCTGG
TTCGAGCGTCCTACCTAGAAATTTACAACGAAGAAATCCGGGACTTGCTG
TCCAAGGATCCCCGGAACAAGCTGGACCTGAAGGAGCACCCGGATCGCGG
GGTGTATGTTAAGGACCTTACGACATTTGTGGTGAAAAATGCCGAAGAGA
TTGGCAAGGTTATGCAGGCAGGAAAACGCAATCGTTCAACTGGAGCTACG
CTCATGAACCAGAACTCGTCTCGATCGCATTCTGTCTTTACCATCATTAT
CGAGTGCTGCGACAACAGTGGGAAATGTTTGGGCAGTGATACGTCATCCA
AGCATCAACAAGACAACTCCCAACAGCAAACTATCCGGGTGGGCAAGCTT
AATCTTGTGGACCTGGCAGGAAGCGAGCGACAAAGCAAAGCAGGTACCAC
GGGAGAGCGTTTCAAGGAGGCAACCAAGATCAACCTTTCGTTGTCGGCGC
TGGGCAACGTCATCACGGCTCTCGTGGACGGCCGGGCGCAGCATGTGCCC
TACCGTGATTCTAAGCTCACACGGCTTCTGCAATCATCGCTGGGTGGGAA
CACCAAGACAGTCATGTGCGCCAATTGTGGGCCTGCAGATTATAATTACG
ACGAAACCCTCTCCACGCTCCGGTACGCCAACCGCGCCAAGAACATCAAA
AACAAACCACACGTGAATGAAGATCCCAAAGACACCATGCTTCGAGAGTT
CAAAGAAGAAATTCTACGCCTGAAGGCTCAGCTTGCTGCGCAAGACAAGC
TCTCCTCCGGGCTCGGAGGTTCTGGAACCCTCGCGGTTGGCTTGGTGTTG
GATGGCACAGCACAAGCGAAGGAAGAGAATTTTAGGGCCAATTACCACAA
GCTGTACAAATACGGTAACGGAGGCAACGAGCGATGGCGAGAGGTGGCTG
TCAGGGCGGAGAAGGAAAAAGAGGAGCTGAAGTCCCAGGCTAAACGGGAC
ATGGATGCCCTGCAAAGCAAGTCGTCGGAGGAAAAAGAAGCTCTGCGGCA
GCGGCTTCTCAAAGAGGCCGAAGATCGGCGCGTGCTCGAAAGCAAGCTAC
TTGCCATGGAAGCCAAATTGATTCAGGGTGGGGAGTCTGTAGACAGGGCA
AACCACGACAAACTTATGAGAAAAGCCAAGGGTGAAGTGGACGCGCAGCA
GCAACATCAGCGACGGCTGGCCCAGGAACTTGCCATCAAGGAGGAAACGC
ACCTGGTCTTGGAAGAAGAATACTCGAGTTTGCAAGAAGAGGTGGACGCC
AAGACCCGAAAACTCCAGAGGCTCATTTCCAAGTATCGCGGGGCCACACG
CGAGAACCAGGACCTGCAAGCGGAGTTTCAGCAGGAGCGCGAGGACTTGC
TCGAAACGGTTCGACAATTGACGCAGCAGCTGAAGCTTAAGGATCTTGTG
GTGCAGAACTTTATCCCTCCCGAGATTGCAATGACGATAGAGCAGCGTGC
TACATGGAGCGAAGAACGGGATGCATGGACTGTGCCATTTTTGAGGTACG
CCGGCAACAACTTGAAGAGAGTAAACTTGAAGCGGCCGGTCGCATCTCCC
TCGTCCCGGCGACCTGAGACGCAGTATGCCCGAGCTAGGCGGAATCAGGA
CACGGACATGCGGTTTAGGGTAGATAATCTGTTGGACGTGGAACTTGACA
TGGACGACGGAGCACCCCCATTGCAGCACTACGGTGACGCGGTGGCGGCG
GGTGCTGGTGTGGAAGCAGAAGCATATCCGCCACTGGTCCTGAGGGTCTT
AGACATGTCCTTGGACGAAGATGGGATTGTACCCAATGAAGATGAGGAAG
AAGAGGAGGAGAATCTAGACCCGTTTCCTCCCTTGTCGCCCTATTTGCGG
TATGCGGACCACCATTATGAACCGTCGATGGCTGCGACTGCTGCCGCGAA
TGAAAGGAGATAG back to top
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