NO09G01490.1, NO09G01490.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G01490.1
Unique NameNO09G01490.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length315
Alignment locationchr9:473591..474031 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:473591..474031 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G01490.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01490NO09G01490Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G01490.1NO09G01490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G01490.1.cds1NO09G01490.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G01490.1.cds2NO09G01490.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G01490.1 ID=NO09G01490.1|Name=NO09G01490.1|organism=Nannochloropsis oceanica|type=mRNA|length=315bp
ATGTCTGTCGCCATTGTTGTCGGTATTGTCGTTTTGGAGGTAGCAATTAA
TTTGGCTAGGGCTGGAGGAGCATGTTGTGCGCGCATATTTACGAATGAAG
CCTCGAGGGGAGAAGGCGAGGAAGAGGCTGGAATGGAAGCGGCTGGTGCC
TTTAAAGGGGTAATCCAGACCCCGGTCAATAGCACTGGAATGATAAATGA
CAAGCTTATTGTCGTCGTCGGAATGCTGTGGTTGTGTCCTGGTGCCTTGT
GCGACAGGGACCGTTGTGTATATCTCGAGGACAAAACGCCCCAAGGCCTG
CATATGGTGGCTTAG
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protein sequence of NO09G01490.1

>NO09G01490.1-protein ID=NO09G01490.1-protein|Name=NO09G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=105bp
MSVAIVVGIVVLEVAINLARAGGACCARIFTNEASRGEGEEEAGMEAAGA
FKGVIQTPVNSTGMINDKLIVVVGMLWLCPGALCDRDRCVYLEDKTPQGL
HMVA*
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mRNA from alignment at chr9:473591..474031-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G01490.1 ID=NO09G01490.1|Name=NO09G01490.1|organism=Nannochloropsis oceanica|type=mRNA|length=441bp|location=Sequence derived from alignment at chr9:473591..474031- (Nannochloropsis oceanica)
ATGTCTGTCGCCATTGTTGTCGGTATTGTCGTTTTGGAGGTAGCAATTAA
TTTGGCTAGGGCTGGAGGAGCATGTTGTGCGCGCATATTTACGAATGAAG
CCTCGAGGGGAGAAGGCGAGGAAGAGGCTGGAATGGAAGCGGCTGGTGCC
TTTAAAGGGGTAATCCAGACCCCGGTCAATAGCACTGGAATGATAAATGA
CAAGCTTATTGTCGTCGTCGGAATGCTGTGGTTGTGTCCTGGTGCCTTGT
GCGGTAAGCATTGCGAAATGGGGGAGGCAAGACTGACCCCAAGTTAGGGG
CCCTATCTCCCCTCTGGCCCACAGCGAATTCAAGCACATTGCGACCATCC
ACCGTTCACAATACCCTCCACCAATAAAGACAGGGACCGTTGTGTATATC
TCGAGGACAAAACGCCCCAAGGCCTGCATATGGTGGCTTAG
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Coding sequence (CDS) from alignment at chr9:473591..474031-

>NO09G01490.1 ID=NO09G01490.1|Name=NO09G01490.1|organism=Nannochloropsis oceanica|type=CDS|length=315bp|location=Sequence derived from alignment at chr9:473591..474031- (Nannochloropsis oceanica)
ATGTCTGTCGCCATTGTTGTCGGTATTGTCGTTTTGGAGGTAGCAATTAA
TTTGGCTAGGGCTGGAGGAGCATGTTGTGCGCGCATATTTACGAATGAAG
CCTCGAGGGGAGAAGGCGAGGAAGAGGCTGGAATGGAAGCGGCTGGTGCC
TTTAAAGGGGTAATCCAGACCCCGGTCAATAGCACTGGAATGATAAATGA
CAAGCTTATTGTCGTCGTCGGAATGCTGTGGTTGTGTCCTGGTGCCTTGT
GCGACAGGGACCGTTGTGTATATCTCGAGGACAAAACGCCCCAAGGCCTG
CATATGGTGGCTTAG
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Synonyms
Publications