NO09G00340.3, NO09G00340.3 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G00340.3
Unique NameNO09G00340.3
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4821
Alignment locationchr9:164241..170138 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:164241..170138 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO09G00340.3 vs.
Match: EWM27760.1 (protein fan [Nannochloropsis gaditana])

HSP 1 Score: 1345.5 bits (3481), Expect = 0.000e+0
Identity = 775/1275 (60.78%), Postives = 914/1275 (71.69%), Query Frame = 0
Query:    5 GSAGETLSSSSP-FVPTGFLESLQTQQSSSRFNLLLLEHGEIYFGDYAVVRYRIKGRSKIKIPGRLKVSSRSLVFDPVGDVTQPLLRFPYKHMSRVMRYTPYGAEALEFSSLSTTTSTSTSSSSSPSPSPPPSLDGLFLFSCACVNEMKANDLVAPYLPKRCGEEGDYDSADFIFQLQHTSLNEFLDLVEKLYEIAARLKRGDAGATGGVCAEEDLLRPLLEEREKVRAAFDLVQLVDFREKLLLPAAVPVDRISPLIKNPGVLMLTDQRLYFQPAELNNVGITTTSFPLPSIVQIFKRRFMLKQTGLEIFFRAAGGGGEEGE-EDGHNGLGNGSG-GDGEGRREGGMRSTVPSSSSSSSGSHDGSRRIYGNNSNSGNSGEEGLGLGGGGKVESVLFSFRSSHERDRVHDLVLSQPAVAGGALRPVRVAEVTRQWQEGRISNVDYLLYLNMVGDRSFNDLTQYPVFPWVLADYTSKRLDLRDEKSFRDLSKPMGALQEDRLGYLKERYRAMPEEDRDLGLPPRFLYGTHYSTPGYVLFYLVRAAPEHMLCLQDGKFDSADRMFAGVEETWRSCLTNPADLKELIPEFYCSDGEFLLNGAGLPLGTTQGGVRVGDVVLPPWAKNERDFVRKMRKALNESDYVNRHLHAWIDLIFGCKQKGQAAVEADNLFYYLTYEGAVDLEQVADPVERAAFETQIREFGQTPKQVFVGPHPKRHDPPSIPVLLAPSLQDSSSSTAVEVPCRNGGGREGGREGGQRVRGMSEHELDGAWEMVRGDGLSMSFSQSFSMPSSLSQPSLSPSVSGGGSGWEILKKDVVEREGGREGGESPLVAL-ASPMQGQGGGRILSPKALMAKGLGL--EGGGGLQQKEEEEEEGRRRGREGVLGLFSPTSLRLDDRAQRTLEGMIHQAQADEKAA-AAAAAAAAVNYGGGFSLASSSSLGPSPRISVGGGGREGGREGGQGGLSSAVRSEELVQGHDLPSVRGNGLHLPIPSAPPSTNGESLTATAASAAAAGGGDGDCGVPRLRLVGSAPLMLHRDRVSSVRWAEGGREGERTLCSTSDDGSFRVSALVLDEEDGREGGREGELLKASLRSKRHFSPSEIALSCCALVG----EGGREGGREGGLVAGQ--LAVLGSYDNCVYLFSIPSARQILKLDAHDDAVSCLDVVGLFLATGSWDATVKVWSLLPSNSSSSSSSSSSSSSPIEAIPLVEFFDHATQVHCVALSLGREGGREDEPALLAAGAEDGRVIIWGVEAKGMVGSFEAGPMGGRR 1267
            G  G      +P FVPTGFLESL   QS+SRFNLLLLEHGE+YFGDYAVVR+R KGRS IK+PGRLKVSSRSLVFDPV DV+QPLLRFP+KHM+RV R+ P+G EA E+S+L+ ++ +S+ SSSS SP P  SLDGLF+FSCACV EMKANDLV PYL ++ G+  D +  DFIF+LQHT L +FL LV +L E+AARL +GD    G   AEE LLRP+LEERE+    FD VQLVDFREK +L AAVPVDRISPLIKNPGV+MLTD+R YFQPAELNNVGI+TTS  L SIVQ+FKRR+ML+QTGLEIFF AAG GG EG  EDG  G+G  SG G G GRR+GG              S DG     G  +     G+ G       +V SVLFSFRSS ERDRVH L+L+QPA+  G L+PVRVAEVTR+WQE RISN+DYLLYLN + DRSF DLTQYPVFPWVLADYTSK+LD     ++RDLSKPMGAL ++RL YL+ERY +MPEE+ ++G+PP FLYGTHYSTPGYVLFYLVRAAPEHMLCLQDGKFDSADRMF+ V +TW+SCLTNPADLKELIPEFY S G+FL+N  GLPLGTTQGGVR+GDV LPPWA+NERDFVRKMR+ALN+S YV++HLH WIDLIFG KQKG+AAV ADNLFYYLTYEGAVDLEQV DP+ERAAFE QIREFGQTPKQVF+GPHP+R DPPS+PV L PS QDSSSS AV +P  NGGG       G R RG SEHEL+G WEMVRG+ L +S S S S+  S+           GGSGWEIL++D  EREGGREGG  P  +  +SP+   G G ILSPK LMAKGLGL     G  +    ++ E      +G   L SPTSLRL+++AQRTLE MI  A  +E  A   +   AA +  GG S             +  G G   G  GG   L + VR EEL+    L S+ G+   L +P  P +   ++   +  +A A+ G +     PRL L+GS  + LH D V+S++WA+GGR    +LCSTSDDGSFRVS L++  +D  EG R+    KAS +SKRHFSPS+IALS CAL+G    EGG E   EGG  A    LA LGSYDN VYL+SIPSARQ+L+LDAHDDAVSCLDV G +LA+GSWDATVKVW +          SS S  S IE +PL EFF+H TQVHCVAL +   G    E AL+AAGAEDG+V++W + A+ +V SF  G  GGRR
Sbjct:   10 GRPGACYGHRAPSFVPTGFLESLAETQSTSRFNLLLLEHGEVYFGDYAVVRFRPKGRSTIKVPGRLKVSSRSLVFDPVNDVSQPLLRFPFKHMTRVPRHAPHGMEAAEWSTLTFSSPSSSFSSSSSSPPPSSSLDGLFVFSCACVTEMKANDLVGPYLQRQSGDP-DAEGPDFIFRLQHTPLADFLALVGRLCEVAARLVKGDGPGLG---AEEALLRPILEERERASGIFDPVQLVDFREKFILSAAVPVDRISPLIKNPGVVMLTDRRFYFQPAELNNVGISTTSLALASIVQVFKRRYMLRQTGLEIFFAAAGEGGTEGGMEDGKGGVGWASGSGRGSGRRQGG-----------GLDSRDGEG--LGTTATRSKGGQGGEVTEAPPRVNSVLFSFRSSQERDRVHALLLAQPALTDGVLQPVRVAEVTRRWQERRISNLDYLLYLNTLADRSFKDLTQYPVFPWVLADYTSKKLDWESPSTYRDLSKPMGALHQERLAYLRERYHSMPEENAEMGIPPPFLYGTHYSTPGYVLFYLVRAAPEHMLCLQDGKFDSADRMFSCVADTWQSCLTNPADLKELIPEFYFSQGDFLVNVEGLPLGTTQGGVRLGDVALPPWARNERDFVRKMRRALNDSTYVSQHLHEWIDLIFGVKQKGEAAVSADNLFYYLTYEGAVDLEQVTDPLERAAFEAQIREFGQTPKQVFLGPHPRRDDPPSVPVFLTPSFQDSSSSPAVGLPS-NGGG-------GARPRGASEHELEGPWEMVRGESLLLSQSLSQSLSQSM-----------GGSGWEILRQDASEREGGREGGVGPEASSQSSPVHLNGRGSILSPKTLMAKGLGLLPPPAGTDKCTSVQQPEQLMFVMDGAESLQSPTSLRLNEQAQRTLEEMIRVAHNEETYANGCSGPTAAASLRGGAS-------------NTNGDGVVAGVRGGVDDLPAVVRLEELISREALLSIPGSTPRLLLP-LPRAGIHKAEGGSQGAATASTGPEDARDAPRLGLLGSRAVCLHHDAVTSLKWADGGR----SLCSTSDDGSFRVSTLLMGPQD--EGKRDE---KASFQSKRHFSPSDIALSSCALMGGEASEGGLEVKGEGGPAASPHTLAALGSYDNHVYLYSIPSARQLLRLDAHDDAVSCLDVAGPYLASGSWDATVKVWGI---------QSSRSCGSLIEPMPLAEFFEHTTQVHCVALKVEASG---TEAALVAAGAEDGQVMVWNLAARCLVSSFRVG--GGRR 1211          
The following BLAST results are available for this feature:
BLAST of NO09G00340.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27760.10.000e+060.78protein fan [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G00340NO09G00340Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G00340.3NO09G00340.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G00340.3.cds1NO09G00340.3.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G00340.3.cds2NO09G00340.3.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G00340.3.cds3NO09G00340.3.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G00340.3.cds4NO09G00340.3.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G00340.3.cds5NO09G00340.3.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G00340.3.cds6NO09G00340.3.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G00340.3 ID=NO09G00340.3|Name=NO09G00340.3|organism=Nannochloropsis oceanica|type=mRNA|length=4821bp
TGGCTGCTGGTTAAAGTCCTCCTGCGCGTGTGGAAGGATTGTGTGTTGAT
ATCAGGGCGGGGGGGACTCGTTTTTGGTCGAGCGCATCGCTGGGCTGGGG
CATTTCGGGTCTGCGGGGGATGAAGGCCTGCCAGGAGGCTAGAGCCATGC
CTACCACGCTGCCTCTGACACCTTCAGTCAGACCGGACATCAGGTCACCA
GGTCATGATCCACATGCGCTGCTTGCTTGCGGTGTGGTTTGCACAGTGCG
CATATTCACACACACACGGTGTAACGAGGGTGGTAATAGTCTGCTGACAA
TTTCTGCGATCCTCAAAAGCAAGAACTTCGGTATTGAAGGCGGCGGCCCG
CAGCGACTCGCGGTCTTCCACGTGCCCTTTCTTACCCTTTTTTCATTCCC
CGCACACCATACACAGGGACGCGATGTCGACGGGCGGCAGTGCCGGCGAA
ACCCTCTCGTCGTCTTCCCCCTTTGTCCCCACCGGCTTCTTGGAGTCGCT
TCAGACTCAGCAGTCTAGCAGCCGCTTCAATTTGCTCCTCTTAGAACACG
GGGAGATTTACTTCGGAGACTACGCCGTAGTCCGTTACCGCATTAAAGGC
CGATCCAAAATCAAGATTCCAGGCCGCTTAAAGGTGTCCTCTCGCAGCCT
AGTTTTTGATCCAGTGGGGGACGTGACTCAGCCCCTCCTCCGCTTCCCCT
ACAAGCATATGTCCCGTGTCATGCGCTACACTCCCTACGGCGCCGAGGCC
TTAGAATTCTCTTCCCTCTCCACCACCACCTCCACCTCCACCTCCTCCTC
TTCCTCCCCCTCGCCCTCCCCTCCCCCGTCCCTTGACGGTCTTTTCCTCT
TTTCCTGTGCGTGTGTCAACGAGATGAAGGCCAACGACCTCGTGGCCCCC
TACCTCCCCAAGCGATGCGGAGAAGAGGGCGATTACGACAGCGCGGATTT
TATTTTCCAGCTGCAGCACACGTCGCTGAATGAGTTTCTTGATCTGGTCG
AAAAATTGTACGAGATCGCCGCTAGACTGAAAAGGGGAGATGCGGGCGCG
ACGGGGGGCGTGTGTGCAGAGGAGGACTTACTGCGGCCGTTATTGGAGGA
GAGGGAGAAGGTCAGGGCTGCGTTTGACCTGGTGCAACTCGTGGACTTTC
GTGAGAAACTTCTTCTTCCCGCTGCCGTGCCTGTGGACCGCATTTCCCCC
CTTATCAAGAACCCAGGCGTCTTAATGCTCACAGACCAACGCCTCTACTT
CCAACCCGCCGAATTAAACAACGTGGGTATCACCACCACCAGCTTCCCGT
TGCCATCGATCGTTCAAATTTTCAAAAGACGGTTTATGCTAAAACAGACG
GGGTTGGAAATTTTCTTTCGGGCTGCCGGAGGTGGGGGGGAGGAAGGGGA
GGAGGATGGACACAATGGACTTGGTAATGGTAGCGGTGGTGACGGGGAGG
GAAGGAGGGAGGGAGGGATGCGGAGCACTGTCCCGAGCAGCAGCAGCAGC
AGCAGCGGCAGTCACGACGGCAGCCGGAGGATCTATGGCAACAACAGCAA
CAGCGGCAACAGCGGCGAGGAGGGACTGGGCTTAGGAGGAGGGGGAAAAG
TGGAGAGTGTGTTGTTCTCGTTCCGATCCTCCCATGAGCGTGACAGGGTG
CATGATTTGGTGCTATCCCAACCCGCCGTAGCGGGGGGGGCGCTACGGCC
CGTGCGTGTGGCGGAGGTAACGAGGCAATGGCAAGAAGGACGCATTTCAA
ACGTGGACTATTTATTGTATCTCAATATGGTGGGGGATCGGAGCTTCAAC
GACCTGACGCAATATCCCGTCTTCCCGTGGGTGTTGGCCGATTACACCAG
CAAGCGGCTGGACCTGAGGGACGAAAAGAGCTTTCGGGATCTGTCCAAGC
CCATGGGCGCATTGCAAGAGGACAGACTAGGGTACCTTAAGGAGCGGTAC
CGTGCCATGCCCGAGGAGGATAGGGATTTGGGCCTCCCCCCACGGTTTTT
GTACGGGACTCACTACAGTACCCCCGGCTACGTGCTGTTCTATCTGGTAC
GTGCCGCGCCCGAACACATGCTGTGCTTGCAGGACGGGAAATTTGACTCG
GCCGACCGCATGTTCGCGGGGGTGGAGGAGACCTGGCGCTCCTGCCTCAC
CAACCCCGCGGACCTGAAGGAGCTCATCCCTGAATTCTACTGCTCTGACG
GAGAATTCCTGTTGAATGGCGCAGGGCTTCCCTTGGGAACGACCCAGGGA
GGGGTTCGGGTGGGCGATGTGGTCCTCCCGCCCTGGGCCAAGAACGAGAG
GGATTTTGTGCGCAAGATGAGAAAGGCCTTGAACGAAAGCGACTACGTGA
ACCGACATTTGCATGCATGGATCGACCTGATTTTTGGGTGCAAGCAAAAG
GGGCAGGCGGCCGTGGAGGCGGACAACTTGTTCTATTACTTGACGTATGA
AGGCGCTGTCGACTTGGAGCAGGTGGCGGATCCTGTGGAACGAGCGGCAT
TTGAGACCCAGATCAGGGAATTTGGCCAGACACCCAAGCAAGTTTTCGTC
GGTCCCCACCCGAAACGACACGACCCCCCCTCCATCCCTGTCCTCCTCGC
CCCCTCCCTCCAGGACTCCTCCTCCTCCACAGCAGTGGAAGTTCCCTGCA
GGAATGGAGGAGGGAGGGAGGGAGGGAGGGAGGGGGGACAACGGGTCAGA
GGGATGTCAGAACATGAATTGGACGGAGCATGGGAGATGGTGCGAGGTGA
CGGCCTCTCCATGTCGTTTTCACAATCGTTTTCAATGCCCTCGTCCCTGT
CGCAGCCGAGTCTTTCTCCCAGCGTGTCCGGGGGGGGCAGCGGATGGGAA
ATTCTGAAAAAGGACGTGGTGGAGCGGGAGGGCGGGAGGGAGGGAGGGGA
GAGTCCACTGGTGGCGCTGGCTTCGCCGATGCAAGGTCAAGGGGGTGGTC
GGATTTTGAGCCCGAAGGCATTAATGGCTAAGGGGCTTGGTCTCGAGGGA
GGAGGGGGGCTACAGCAAAAGGAGGAGGAGGAGGAGGAGGGGAGACGGAG
AGGGCGGGAGGGCGTGCTGGGGCTCTTCAGTCCCACGAGCCTCCGATTGG
ATGATCGGGCGCAACGCACTCTAGAAGGAATGATTCACCAGGCCCAAGCT
GACGAGAAAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCAATTATGG
TGGTGGTTTCTCCCTCGCTTCCTCGTCTTCTTTGGGACCGTCGCCGAGGA
TAAGTGTAGGAGGGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGCAGGGG
GGTTTATCGTCTGCAGTACGATCGGAAGAATTGGTGCAAGGACACGACCT
TCCCAGCGTGAGGGGGAACGGTCTTCACCTCCCCATCCCCTCCGCCCCTC
CCTCCACCAACGGAGAGAGTCTGACGGCGACAGCTGCTTCTGCTGCTGCT
GCAGGCGGTGGTGATGGTGATTGTGGTGTTCCCCGACTGCGTCTGGTGGG
CAGCGCGCCTCTGATGTTGCATAGGGATAGGGTGTCAAGTGTGAGGTGGG
CGGAGGGAGGGAGGGAGGGAGAGAGGACCTTGTGCAGCACATCCGACGAC
GGTTCGTTTCGGGTGAGCGCCTTAGTGCTGGATGAAGAGGATGGGAGGGA
GGGCGGGAGGGAGGGAGAGTTGTTGAAGGCCAGCTTAAGGTCCAAGCGGC
ATTTCTCGCCCAGCGAGATCGCCTTGTCGTGTTGTGCATTGGTTGGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGCGGTCTTGTGGCGGGCCAGTTGGC
CGTCTTGGGCTCTTATGACAACTGTGTGTATTTGTTTTCCATACCCTCAG
CGCGCCAAATCCTGAAGCTTGACGCCCACGATGATGCAGTGTCCTGCCTG
GACGTTGTTGGTCTCTTCCTCGCCACCGGCTCCTGGGACGCGACAGTCAA
AGTGTGGTCGCTCCTCCCCTCCAACAGTAGTAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCCCGATCGAAGCAATCCCTCTTGTCGAATTTTTCGAC
CACGCGACACAAGTCCACTGTGTCGCCCTGTCCCTCGGGAGGGAGGGAGG
GAGGGAAGACGAGCCGGCCTTGTTGGCGGCGGGCGCAGAAGACGGAAGGG
TGATAATTTGGGGTGTGGAGGCCAAGGGAATGGTTGGCAGCTTCGAGGCC
GGACCGATGGGAGGAAGGAGAAGAGGGGGAGCAGCAGCTGTGGCTGCGAT
GCGGTGGGCAGGGGGAGGCAGGGAGGGAGGAAGGGAAGAGTTGTACGTTG
TGACAGCGGATGGGTGGTTGGGATGCTATACGTCACGAGGGCACCTATTG
GGGAATGCGCAGTATGAGGGAGAGAGGGAGGGAGGAGGCCGGGGAGGGAT
AAGGTGTTTGGATGTACAGAGGATGAGGGATGGGAGGGATATGGTGGTGG
CTGGGTTTGGTGATGGGAGTCTGCGCTTATGGTTGTGTAGGAGAAGAGGG
GGAGAGGAGGGAGGGAGGGAGGGAAGGAGATTGGAATTGTTGGTGGAGGT
GAGAAGGGCACATGAAGATGCAGTGACGTGTGTGGCGTTGGACTGGAAGA
AAGGACGATTGGCGACGGGTGCGGCGGATGCGACGCTTAAGGTGTGGGAG
GTGGAGAGTGAGGAGGGGTAGGGGTATTAGTGAAGGAGGAGATGGGGGGA
TGAAAGTTTGTATGTCTTTTTTGATGTAAATATACATAGATAGAGAAGAC
GCCAGTGTTGGCCTTTGAACGTCAAACAGCACACACAATGAATGAAAACT
TCTGTGTAACACATAGCAAAT
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protein sequence of NO09G00340.3

>NO09G00340.3-protein ID=NO09G00340.3-protein|Name=NO09G00340.3|organism=Nannochloropsis oceanica|type=polypeptide|length=1416bp
MSTGGSAGETLSSSSPFVPTGFLESLQTQQSSSRFNLLLLEHGEIYFGDY
AVVRYRIKGRSKIKIPGRLKVSSRSLVFDPVGDVTQPLLRFPYKHMSRVM
RYTPYGAEALEFSSLSTTTSTSTSSSSSPSPSPPPSLDGLFLFSCACVNE
MKANDLVAPYLPKRCGEEGDYDSADFIFQLQHTSLNEFLDLVEKLYEIAA
RLKRGDAGATGGVCAEEDLLRPLLEEREKVRAAFDLVQLVDFREKLLLPA
AVPVDRISPLIKNPGVLMLTDQRLYFQPAELNNVGITTTSFPLPSIVQIF
KRRFMLKQTGLEIFFRAAGGGGEEGEEDGHNGLGNGSGGDGEGRREGGMR
STVPSSSSSSSGSHDGSRRIYGNNSNSGNSGEEGLGLGGGGKVESVLFSF
RSSHERDRVHDLVLSQPAVAGGALRPVRVAEVTRQWQEGRISNVDYLLYL
NMVGDRSFNDLTQYPVFPWVLADYTSKRLDLRDEKSFRDLSKPMGALQED
RLGYLKERYRAMPEEDRDLGLPPRFLYGTHYSTPGYVLFYLVRAAPEHML
CLQDGKFDSADRMFAGVEETWRSCLTNPADLKELIPEFYCSDGEFLLNGA
GLPLGTTQGGVRVGDVVLPPWAKNERDFVRKMRKALNESDYVNRHLHAWI
DLIFGCKQKGQAAVEADNLFYYLTYEGAVDLEQVADPVERAAFETQIREF
GQTPKQVFVGPHPKRHDPPSIPVLLAPSLQDSSSSTAVEVPCRNGGGREG
GREGGQRVRGMSEHELDGAWEMVRGDGLSMSFSQSFSMPSSLSQPSLSPS
VSGGGSGWEILKKDVVEREGGREGGESPLVALASPMQGQGGGRILSPKAL
MAKGLGLEGGGGLQQKEEEEEEGRRRGREGVLGLFSPTSLRLDDRAQRTL
EGMIHQAQADEKAAAAAAAAAAVNYGGGFSLASSSSLGPSPRISVGGGGR
EGGREGGQGGLSSAVRSEELVQGHDLPSVRGNGLHLPIPSAPPSTNGESL
TATAASAAAAGGGDGDCGVPRLRLVGSAPLMLHRDRVSSVRWAEGGREGE
RTLCSTSDDGSFRVSALVLDEEDGREGGREGELLKASLRSKRHFSPSEIA
LSCCALVGEGGREGGREGGLVAGQLAVLGSYDNCVYLFSIPSARQILKLD
AHDDAVSCLDVVGLFLATGSWDATVKVWSLLPSNSSSSSSSSSSSSSPIE
AIPLVEFFDHATQVHCVALSLGREGGREDEPALLAAGAEDGRVIIWGVEA
KGMVGSFEAGPMGGRRRGGAAAVAAMRWAGGGREGGREELYVVTADGWLG
CYTSRGHLLGNAQYEGEREGGGRGGIRCLDVQRMRDGRDMVVAGFGDGSL
RLWLCRRRGGEEGGREGRRLELLVEVRRAHEDAVTCVALDWKKGRLATGA
ADATLKVWEVESEEG*
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mRNA from alignment at chr9:164241..170138+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G00340.3 ID=NO09G00340.3|Name=NO09G00340.3|organism=Nannochloropsis oceanica|type=mRNA|length=5898bp|location=Sequence derived from alignment at chr9:164241..170138+ (Nannochloropsis oceanica)
TGGCTGCTGGTTAAAGTCCTCCTGCGCGTGTGGAAGGATTGTGTGTTGAT ATCAGGGCGGGGGGGACTCGTTTTTGGTCGAGCGCATCGCTGGGCTGGGG CATTTCGGGTCTGCGGGGGATGAAGGCCTGCCAGGAGGCTAGAGCCATGC CTACCACGCTGCCTCTGACACCTTCAGTCAGACCGGACATCAGGTCACCA GGTCATGATCCACATGCGCTGCTTGCTTGCGGTGTGGTTTGCACAGTGCG CATATTCACACACACACGGTGTAACGAGGGTGGTAATAGTCTGCTGACAA TTTCTGCGATCCTCAAAAGCAAGAACTTCGGTATTGAAGGCGGCGGCCCG CAGCGACTCGCGGTCTTCCACGTGCCCTTTCTTACCCTTTTTTCATTCCC CGCACACCATACACAGGGACGCGATGTCGACGGGCGGCAGTGCCGGCGAA ACCCTCTCGTCGTCTTCCCCCTTTGTCCCCACCGGCTTCTTGGAGTCGCT TCAGACTCAGCAGTCTAGCAGCCGCTTCAATTTGCTCCTCTTAGAACACG GGGAGATTTACTTCGGTACGTCCACGAGCCGAAGCGATACCCTCCCTCGT TCCATCTCTCCCTCCCTGAATTGGAGAGGTCGCTCGGGGGTGTATAATGC TGGTCTGGCTTGGTTAATGCGTTCATAAACGGGGGAGAAAATGGGATGCT TCGTCTCCGCCTTCGATCAGCCGCCGGACGCGCCCTCTTTGCCTTCCTCT TCCTTTTCCCGTATGCTGCCTCGCATTTCTGGCGCACCCCTGTTATACAC GCGTCGAGCTGATAGAATGGTTGTCTTCAAGACTTACCCAAACCCCCTTC CACTCTCTTTTGCACCCCTTCCTTCCCTCACCCCTCCCTCCTCTCCTTCT GCCTATTTCCCCAGGAGACTACGCCGTAGTCCGTTACCGCATTAAAGGCC GATCCAAAATCAAGATTCCAGGCCGCTTAAAGGTGTCCTCTCGCAGCCTA GTTTTTGATCCAGTGGGGGACGTGACTCAGGTATGTTTGGTGAGGGTGCT ACTCTCCCTCCCTCCCTTCCTCTCTCCCTCCTTCTTCATCCCTTCGTTTC CCTCTAATCCTGTTTGTAAAAGGCATCCATGACTGGGATCTCCATGGTTC AGTAAATTGCCTGTAGTCATTCATACTTTGCCCTCGTTGCTTCCTTCCCC ACAGCCCCTCCTCCGCTTCCCCTACAAGCATATGTCCCGTGTCATGCGCT ACACTCCCTACGGCGCCGAGGCCTTAGAATTCTCTTCCCTCTCCACCACC ACCTCCACCTCCACCTCCTCCTCTTCCTCCCCCTCGCCCTCCCCTCCCCC GTCCCTTGACGGTCTTTTCCTCTTTTCCTGTGCGTGTGTCAACGAGATGA AGGCCAACGACCTCGTGGCCCCCTACCTCCCCAAGCGATGCGGAGAAGAG GGCGATTACGACAGCGCGGATTTTATTTTCCAGCTGCAGCACACGTCGCT GAATGAGTTTCTTGATCTGGTAGGCAGTAAGAGCAGGATAGAGGGAAGGA GAAAGGGAGGGAAGGAGGAAAGGAGGGGGGGAAAGAGGGAGAGGGAGGGA AGGGGAGGACAAGAAGCCTTTTTAGCATTTGAATTTGGTTATTTTTAACA ATTCCTTATCGCTCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTC CTTCCTCCCTTCCTCGCTCCCTCTCATCCTTCTTCCTTCGCTGTATGCCA CAGGTCGAAAAATTGTACGAGATCGCCGCTAGACTGAAAAGGGGAGATGC GGGCGCGACGGGGGGCGTGTGTGCAGAGGAGGACTTACTGCGGCCGTTAT TGGAGGAGAGGGAGAAGGTCAGGGCTGCGTTTGACCTGGTGCAACTCGTG GACTTTCGGTAGGACTCGGTGCCCCTCCTCTCTCTTTCCCTCCCTCTTTC CCTCCCTCCTTACCTCCGTTCCATTTTCCCGCACTCCCTTGCACGCATGG GCCATTCATCGATCCATCTACTCCATGCCTTGCCTCCCCTCCTGTCTCCC CCCCCATCACCCCCCCCTAACCTCAGTGAGAAACTTCTTCTTCCCGCTGC CGTGCCTGTGGACCGCATTTCCCCCCTTATCAAGAACCCAGGCGTCTTAA TGCTCACAGACCAACGCCTCTACTTCCAACCCGCCGAATTAAACAACGTG GGTATCACCACCACCAGCTTCCCGTTGCCATCGATCGTTCAAATTTTCAA AAGACGGTTTATGCTAAAACAGACGGGGTTGGAAATTTTCTTTCGGGCTG CCGGAGGTGGGGGGGAGGAAGGGGAGGAGGATGGACACAATGGACTTGGT AATGGTAGCGGTGGTGACGGGGAGGGAAGGAGGGAGGGAGGGATGCGGAG CACTGTCCCGAGCAGCAGCAGCAGCAGCAGCGGCAGTCACGACGGCAGCC GGAGGATCTATGGCAACAACAGCAACAGCGGCAACAGCGGCGAGGAGGGA CTGGGCTTAGGAGGAGGGGGAAAAGTGGAGAGTGTGTTGTTCTCGTTCCG ATCCTCCCATGAGCGTGACAGGGTGCATGATTTGGTGCTATCCCAACCCG CCGTAGCGGGGGGGGCGCTACGGCCCGTGCGTGTGGCGGAGGTAACGAGG CAATGGCAAGAAGGACGCATTTCAAACGTGGACTATTTATTGTATCTCAA TATGGTGGGGGATCGGAGCTTCAACGACCTGACGCAATATCCCGTCTTCC CGTGGGTGTTGGCCGATTACACCAGCAAGCGGCTGGACCTGAGGGACGAA AAGAGCTTTCGGGATCTGTCCAAGCCCATGGGCGCATTGCAAGAGGACAG ACTAGGGTACCTTAAGGAGCGGTACCGTGCCATGCCCGAGGAGGATAGGG ATTTGGGCCTCCCCCCACGGTTTTTGTACGGGACTCACTACAGTACCCCC GGCTACGTGCTGTTCTATCTGGTACGTGCCGCGCCCGAACACATGCTGTG CTTGCAGGACGGGAAATTTGACTCGGCCGACCGCATGTTCGCGGGGGTGG AGGAGACCTGGCGCTCCTGCCTCACCAACCCCGCGGACCTGAAGGAGCTC ATCCCTGAATTCTACTGCTCTGACGGAGAATTCCTGTTGAATGGCGCAGG GCTTCCCTTGGGAACGACCCAGGGAGGGGTTCGGGTGGGCGATGTGGTCC TCCCGCCCTGGGCCAAGAACGAGAGGGATTTTGTGCGCAAGATGAGAAAG GCCTTGAACGAAAGCGACTACGTGAACCGACATTTGCATGCATGGATCGA CCTGATTTTTGGGTGCAAGCAAAAGGGGCAGGCGGCCGTGGAGGCGGACA ACTTGTTCTATTACTTGACGTATGAAGGCGCTGTCGACTTGGAGCAGGTG GCGGATCCTGTGGAACGAGCGGCATTTGAGACCCAGATCAGGGAATTTGG CCAGGTATGCCCTTTACCCCTCCCTCTCTCCCTCCCTCCCAGCTTCCCTC CCTCCCTCGCTATTGCCTTGCGATGTGTCGGTGACTGGCCTTCGACCATG ACCCATGACTCTAACGTGTGCTTACCACCGCTCCCCCCCTCCCTCCCTGC CTTTAGACACCCAAGCAAGTTTTCGTCGGTCCCCACCCGAAACGACACGA CCCCCCCTCCATCCCTGTCCTCCTCGCCCCCTCCCTCCAGGACTCCTCCT CCTCCACAGCAGTGGAAGTTCCCTGCAGGAATGGAGGAGGGAGGGAGGGA GGGAGGGAGGGGGGACAACGGGTCAGAGGGATGTCAGAACATGAATTGGA CGGAGCATGGGAGATGGTGCGAGGTGACGGCCTCTCCATGTCGTTTTCAC AATCGTTTTCAATGCCCTCGTCCCTGTCGCAGCCGAGTCTTTCTCCCAGC GTGTCCGGGGGGGGCAGCGGATGGGAAATTCTGAAAAAGGACGTGGTGGA GCGGGAGGGCGGGAGGGAGGGAGGGGAGAGTCCACTGGTGGCGCTGGCTT CGCCGATGCAAGGTCAAGGGGGTGGTCGGATTTTGAGCCCGAAGGCATTA ATGGCTAAGGGGCTTGGTCTCGAGGGAGGAGGGGGGCTACAGCAAAAGGA GGAGGAGGAGGAGGAGGGGAGACGGAGAGGGCGGGAGGGCGTGCTGGGGC TCTTCAGTCCCACGAGCCTCCGATTGGATGATCGGGCGCAACGCACTCTA GAAGGAATGATTCACCAGGCCCAAGCTGACGAGAAAGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGTCAATTATGGTGGTGGTTTCTCCCTCGCTTCCT CGTCTTCTTTGGGACCGTCGCCGAGGATAAGTGTAGGAGGGGGAGGGAGG GAGGGAGGGAGGGAAGGAGGGCAGGGGGGTTTATCGTCTGCAGTACGATC GGAAGAATTGGTGCAAGGACACGACCTTCCCAGCGTGAGGGGGAACGGTC TTCACCTCCCCATCCCCTCCGCCCCTCCCTCCACCAACGGAGAGAGTCTG ACGGCGACAGCTGCTTCTGCTGCTGCTGCAGGCGGTGGTGATGGTGATTG TGGTGTTCCCCGACTGCGTCTGGTGGGCAGCGCGCCTCTGATGTTGCATA GGGATAGGGTGTCAAGTGTGAGGTGGGCGGAGGGAGGGAGGGAGGGAGAG AGGACCTTGTGCAGCACATCCGACGACGGTTCGTTTCGGGTGAGCGCCTT AGTGCTGGATGAAGAGGATGGGAGGGAGGGCGGGAGGGAGGGAGAGTTGT TGAAGGCCAGCTTAAGGTCCAAGCGGCATTTCTCGCCCAGCGAGATCGCC TTGTCGTGTTGTGCATTGGTTGGGGAGGGAGGGAGGGAGGGAGGGAGGGA GGGCGGTCTTGTGGCGGGCCAGTTGGCCGTCTTGGGCTCTTATGACAACT GTGTGTATTTGTTTTCCATACCCTCAGCGCGCCAAATCCTGAAGCTTGAC GCCCACGATGATGCAGTGTCCTGCCTGGACGTTGTTGGTCTCTTCCTCGC CACCGGCTCCTGGGACGCGACAGTCAAAGTGTGGTCGCTCCTCCCCTCCA ACAGTAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCGATCGAA GCAATCCCTCTTGTCGAATTTTTCGACCACGCGACACAAGTCCACTGTGT CGCCCTGTCCCTCGGGAGGGAGGGAGGGAGGGAAGACGAGCCGGCCTTGT TGGCGGCGGGCGCAGAAGACGGAAGGGTGATAATTTGGGGTGTGGAGGCC AAGGGAATGGTTGGCAGCTTCGAGGCCGGACCGATGGGAGGAAGGAGAAG AGGGGGAGCAGCAGCTGTGGCTGCGATGCGGTGGGCAGGGGGAGGCAGGG AGGGAGGAAGGGAAGAGTTGTACGTTGTGACAGCGGATGGGTGGTTGGGA TGCTATACGTCACGAGGGCACCTATTGGGGAATGCGCAGTATGAGGGAGA GAGGGAGGGAGGAGGCCGGGGAGGGATAAGGTGTTTGGATGTACAGAGGA TGAGGGATGGGAGGGATATGGTGGTGGCTGGGTTTGGTGATGGGAGTCTG CGCTTATGGTTGTGTAGGAGAAGAGGGGGAGAGGAGGGAGGGAGGGAGGG AAGGAGATTGGAATTGTTGGTGGAGGTGAGAAGGGCACATGAAGATGCAG TGACGTGTGTGGCGTTGGACTGGAAGAAAGGACGATTGGCGACGGGTGCG GCGGATGCGACGCTTAAGGTGTGGGAGGTGGAGAGTGAGGAGGGGTAGGG GTATTAGTGAAGGAGGAGATGGGGGGATGAAAGTTTGTATGTCTTTTTTG ATGTAAATATACATAGATAGAGAAGACGCCAGTGTTGGCCTTTGAACGTC AAACAGCACACACAATGAATGAAAACTTCTGTGTAACACATAGCAAAT
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Coding sequence (CDS) from alignment at chr9:164241..170138+

>NO09G00340.3 ID=NO09G00340.3|Name=NO09G00340.3|organism=Nannochloropsis oceanica|type=CDS|length=4248bp|location=Sequence derived from alignment at chr9:164241..170138+ (Nannochloropsis oceanica)
ATGTCGACGGGCGGCAGTGCCGGCGAAACCCTCTCGTCGTCTTCCCCCTT
TGTCCCCACCGGCTTCTTGGAGTCGCTTCAGACTCAGCAGTCTAGCAGCC
GCTTCAATTTGCTCCTCTTAGAACACGGGGAGATTTACTTCGGAGACTAC
GCCGTAGTCCGTTACCGCATTAAAGGCCGATCCAAAATCAAGATTCCAGG
CCGCTTAAAGGTGTCCTCTCGCAGCCTAGTTTTTGATCCAGTGGGGGACG
TGACTCAGCCCCTCCTCCGCTTCCCCTACAAGCATATGTCCCGTGTCATG
CGCTACACTCCCTACGGCGCCGAGGCCTTAGAATTCTCTTCCCTCTCCAC
CACCACCTCCACCTCCACCTCCTCCTCTTCCTCCCCCTCGCCCTCCCCTC
CCCCGTCCCTTGACGGTCTTTTCCTCTTTTCCTGTGCGTGTGTCAACGAG
ATGAAGGCCAACGACCTCGTGGCCCCCTACCTCCCCAAGCGATGCGGAGA
AGAGGGCGATTACGACAGCGCGGATTTTATTTTCCAGCTGCAGCACACGT
CGCTGAATGAGTTTCTTGATCTGGTCGAAAAATTGTACGAGATCGCCGCT
AGACTGAAAAGGGGAGATGCGGGCGCGACGGGGGGCGTGTGTGCAGAGGA
GGACTTACTGCGGCCGTTATTGGAGGAGAGGGAGAAGGTCAGGGCTGCGT
TTGACCTGGTGCAACTCGTGGACTTTCGTGAGAAACTTCTTCTTCCCGCT
GCCGTGCCTGTGGACCGCATTTCCCCCCTTATCAAGAACCCAGGCGTCTT
AATGCTCACAGACCAACGCCTCTACTTCCAACCCGCCGAATTAAACAACG
TGGGTATCACCACCACCAGCTTCCCGTTGCCATCGATCGTTCAAATTTTC
AAAAGACGGTTTATGCTAAAACAGACGGGGTTGGAAATTTTCTTTCGGGC
TGCCGGAGGTGGGGGGGAGGAAGGGGAGGAGGATGGACACAATGGACTTG
GTAATGGTAGCGGTGGTGACGGGGAGGGAAGGAGGGAGGGAGGGATGCGG
AGCACTGTCCCGAGCAGCAGCAGCAGCAGCAGCGGCAGTCACGACGGCAG
CCGGAGGATCTATGGCAACAACAGCAACAGCGGCAACAGCGGCGAGGAGG
GACTGGGCTTAGGAGGAGGGGGAAAAGTGGAGAGTGTGTTGTTCTCGTTC
CGATCCTCCCATGAGCGTGACAGGGTGCATGATTTGGTGCTATCCCAACC
CGCCGTAGCGGGGGGGGCGCTACGGCCCGTGCGTGTGGCGGAGGTAACGA
GGCAATGGCAAGAAGGACGCATTTCAAACGTGGACTATTTATTGTATCTC
AATATGGTGGGGGATCGGAGCTTCAACGACCTGACGCAATATCCCGTCTT
CCCGTGGGTGTTGGCCGATTACACCAGCAAGCGGCTGGACCTGAGGGACG
AAAAGAGCTTTCGGGATCTGTCCAAGCCCATGGGCGCATTGCAAGAGGAC
AGACTAGGGTACCTTAAGGAGCGGTACCGTGCCATGCCCGAGGAGGATAG
GGATTTGGGCCTCCCCCCACGGTTTTTGTACGGGACTCACTACAGTACCC
CCGGCTACGTGCTGTTCTATCTGGTACGTGCCGCGCCCGAACACATGCTG
TGCTTGCAGGACGGGAAATTTGACTCGGCCGACCGCATGTTCGCGGGGGT
GGAGGAGACCTGGCGCTCCTGCCTCACCAACCCCGCGGACCTGAAGGAGC
TCATCCCTGAATTCTACTGCTCTGACGGAGAATTCCTGTTGAATGGCGCA
GGGCTTCCCTTGGGAACGACCCAGGGAGGGGTTCGGGTGGGCGATGTGGT
CCTCCCGCCCTGGGCCAAGAACGAGAGGGATTTTGTGCGCAAGATGAGAA
AGGCCTTGAACGAAAGCGACTACGTGAACCGACATTTGCATGCATGGATC
GACCTGATTTTTGGGTGCAAGCAAAAGGGGCAGGCGGCCGTGGAGGCGGA
CAACTTGTTCTATTACTTGACGTATGAAGGCGCTGTCGACTTGGAGCAGG
TGGCGGATCCTGTGGAACGAGCGGCATTTGAGACCCAGATCAGGGAATTT
GGCCAGACACCCAAGCAAGTTTTCGTCGGTCCCCACCCGAAACGACACGA
CCCCCCCTCCATCCCTGTCCTCCTCGCCCCCTCCCTCCAGGACTCCTCCT
CCTCCACAGCAGTGGAAGTTCCCTGCAGGAATGGAGGAGGGAGGGAGGGA
GGGAGGGAGGGGGGACAACGGGTCAGAGGGATGTCAGAACATGAATTGGA
CGGAGCATGGGAGATGGTGCGAGGTGACGGCCTCTCCATGTCGTTTTCAC
AATCGTTTTCAATGCCCTCGTCCCTGTCGCAGCCGAGTCTTTCTCCCAGC
GTGTCCGGGGGGGGCAGCGGATGGGAAATTCTGAAAAAGGACGTGGTGGA
GCGGGAGGGCGGGAGGGAGGGAGGGGAGAGTCCACTGGTGGCGCTGGCTT
CGCCGATGCAAGGTCAAGGGGGTGGTCGGATTTTGAGCCCGAAGGCATTA
ATGGCTAAGGGGCTTGGTCTCGAGGGAGGAGGGGGGCTACAGCAAAAGGA
GGAGGAGGAGGAGGAGGGGAGACGGAGAGGGCGGGAGGGCGTGCTGGGGC
TCTTCAGTCCCACGAGCCTCCGATTGGATGATCGGGCGCAACGCACTCTA
GAAGGAATGATTCACCAGGCCCAAGCTGACGAGAAAGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGTCAATTATGGTGGTGGTTTCTCCCTCGCTTCCT
CGTCTTCTTTGGGACCGTCGCCGAGGATAAGTGTAGGAGGGGGAGGGAGG
GAGGGAGGGAGGGAAGGAGGGCAGGGGGGTTTATCGTCTGCAGTACGATC
GGAAGAATTGGTGCAAGGACACGACCTTCCCAGCGTGAGGGGGAACGGTC
TTCACCTCCCCATCCCCTCCGCCCCTCCCTCCACCAACGGAGAGAGTCTG
ACGGCGACAGCTGCTTCTGCTGCTGCTGCAGGCGGTGGTGATGGTGATTG
TGGTGTTCCCCGACTGCGTCTGGTGGGCAGCGCGCCTCTGATGTTGCATA
GGGATAGGGTGTCAAGTGTGAGGTGGGCGGAGGGAGGGAGGGAGGGAGAG
AGGACCTTGTGCAGCACATCCGACGACGGTTCGTTTCGGGTGAGCGCCTT
AGTGCTGGATGAAGAGGATGGGAGGGAGGGCGGGAGGGAGGGAGAGTTGT
TGAAGGCCAGCTTAAGGTCCAAGCGGCATTTCTCGCCCAGCGAGATCGCC
TTGTCGTGTTGTGCATTGGTTGGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGCGGTCTTGTGGCGGGCCAGTTGGCCGTCTTGGGCTCTTATGACAACT
GTGTGTATTTGTTTTCCATACCCTCAGCGCGCCAAATCCTGAAGCTTGAC
GCCCACGATGATGCAGTGTCCTGCCTGGACGTTGTTGGTCTCTTCCTCGC
CACCGGCTCCTGGGACGCGACAGTCAAAGTGTGGTCGCTCCTCCCCTCCA
ACAGTAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCGATCGAA
GCAATCCCTCTTGTCGAATTTTTCGACCACGCGACACAAGTCCACTGTGT
CGCCCTGTCCCTCGGGAGGGAGGGAGGGAGGGAAGACGAGCCGGCCTTGT
TGGCGGCGGGCGCAGAAGACGGAAGGGTGATAATTTGGGGTGTGGAGGCC
AAGGGAATGGTTGGCAGCTTCGAGGCCGGACCGATGGGAGGAAGGAGAAG
AGGGGGAGCAGCAGCTGTGGCTGCGATGCGGTGGGCAGGGGGAGGCAGGG
AGGGAGGAAGGGAAGAGTTGTACGTTGTGACAGCGGATGGGTGGTTGGGA
TGCTATACGTCACGAGGGCACCTATTGGGGAATGCGCAGTATGAGGGAGA
GAGGGAGGGAGGAGGCCGGGGAGGGATAAGGTGTTTGGATGTACAGAGGA
TGAGGGATGGGAGGGATATGGTGGTGGCTGGGTTTGGTGATGGGAGTCTG
CGCTTATGGTTGTGTAGGAGAAGAGGGGGAGAGGAGGGAGGGAGGGAGGG
AAGGAGATTGGAATTGTTGGTGGAGGTGAGAAGGGCACATGAAGATGCAG
TGACGTGTGTGGCGTTGGACTGGAAGAAAGGACGATTGGCGACGGGTGCG
GCGGATGCGACGCTTAAGGTGTGGGAGGTGGAGAGTGAGGAGGGGTAG
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Synonyms
Publications