NO08G04040.1, NO08G04040.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G04040.1
Unique NameNO08G04040.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3136
Alignment locationchr8:1133146..1138807 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:1133146..1138807 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO08G04040.1 vs.
Match: CBJ26319.1 (Glutamate synthase (NADH/NADPH-dependent) [Ectocarpus siliculosus])

HSP 1 Score: 860.5 bits (2222), Expect = 2.900e-246
Identity = 394/526 (74.90%), Postives = 458/526 (87.07%), Query Frame = 0
Query:   41 HEVWRDDNEQ-DNLPKVKKRDGTIAAIEKKRGFVDYHRNPDPYRDPLDRVFDWGEIKTDEGHDEVERKVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVYKGQWREAIDRLHKTNNFPEFTGLVCPAPCEGGCVAGLVDKPVTIKNIEYAIVERAWEEGWITPRIPQYRSGMSVAVVGSGPSGLAAADCLNQMGHKVTVYEREDRIGGLLMYGIPNMKLDKEKVLRRVDMLREEGIEFVTNTNVGKDVAVEDLRANVDALVLTLGSTVPRDLRVPNREANGIHFAMEFLTKNQKRLMMTREGRLESGWDKSFITAEGKDVIVVGGGDTGTDCIGTSMRHRCKSIVNFELMPRPPNERAPHNPWPQWPKIYGTDYGHAEVQAVFGKDPREYSVMTKEFLRDEKGNVKGLVTVNVEVSAKGIKPIAGTEKEWPADLVILAMGFMNPEVTIPQALSLDVDQRHNIRAEYGDYRTNIDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIEKSE-VTEDEAYIGAM 565
            HE+WRD ++  DN PKVK+RDGT   I+K RGF+DY+RNPDPYRDPL+RVFDWGEI  D  HDEVER VQAARCMDCGTPFCQTHTGCP++NLIPEWNELV+KG WR+AI+ LHKTNNFPEFTG VCPAPCEG CVAGL+D PVTIK+IEY+I+ERA+EEGW+ PRIP +R+GM+VAVVGSGP+GLAAAD LNQMGHKVTVYEREDR+GGLLMYGIPNMKLDK+ V RR+D+L EEGIEFVT  N+G DV V D+RA+ DALVLT+GST PRDL VP RE  G+HFAMEFLTKNQKRL+MT +G+LES WD  FI+AEGKDVIV+GGGDTGTDCIGTSMRHRC+S+VNFEL+P+PP+ RAP NPWPQWPKI+G DYGH EV+AVFG+DPR+YSVMTKEFL D+ GNV+GL+TV VEV+  GIK I GTEKEWPA LV+LAMGF++PE  I + L L++DQR NI A YGDYRTN +GVF+AGDCRRGQSLVVWAINEGRG A++VN +L  K+E   E+E +IGAM
Sbjct:   35 HEIWRDQSDTTDNTPKVKRRDGTFGNIDKTRGFIDYYRNPDPYRDPLERVFDWGEIN-DASHDEVERTVQAARCMDCGTPFCQTHTGCPIHNLIPEWNELVFKGAWRDAIENLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPVTIKSIEYSIIERAFEEGWVVPRIPTHRTGMNVAVVGSGPAGLAAADQLNQMGHKVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRIDLLAEEGIEFVTGANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRELKGVHFAMEFLTKNQKRLLMTGDGKLESNWDGGFISAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPQPPDSRAPGNPWPQWPKIFGIDYGHGEVRAVFGEDPRQYSVMTKEFLSDDDGNVRGLITVEVEVTKDGIKQIEGTEKEWPAQLVVLAMGFVSPESAISKPLKLELDQRENIHAPYGDYRTNAEGVFSAGDCRRGQSLVVWAINEGRGAADAVNSYLAAKAEQQMEEETFIGAM 559          
The following BLAST results are available for this feature:
BLAST of NO08G04040.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
CBJ26319.12.900e-24674.90Glutamate synthase (NADH/NADPH-dependent) [Ectocar... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G04040NO08G04040Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G04040.1NO08G04040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G04040.1.cds1NO08G04040.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds2NO08G04040.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds3NO08G04040.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds4NO08G04040.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds5NO08G04040.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds6NO08G04040.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds7NO08G04040.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds8NO08G04040.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds9NO08G04040.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds10NO08G04040.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds11NO08G04040.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds12NO08G04040.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds13NO08G04040.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds14NO08G04040.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds15NO08G04040.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G04040.1.cds16NO08G04040.1.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G04040.1 ID=NO08G04040.1|Name=NO08G04040.1|organism=Nannochloropsis oceanica|type=mRNA|length=3136bp
CCTACCTGTTTGAGTGTGTGTTGGGTGGTGTAAAGTGAGTAAAAGTGTAA
AGTGGATGGGTGCAACCGTGGCAGCAGTTGCGGAGCAGGGGGAGGCTGAA
AGCTGACTTAGAGCCACTCAACAAAACTGGCGACGCGGATCTGGTCCCGT
GCTAAACTCCATTGTCTGACCCAGCAATGTGTAATATGCCTGTGGTCGTC
GGTCATGATCTATTTGCCGTGCTGGCCTCGAGGAGGGTAAGATAGCCTTT
CTACAGGCCGTGTAAGAGGAGGAAAGTGAACTGCCTGCGAGTCGCCTCTT
CAGAGACCCTGCCCTTCAATTGCCGCACGCTGTAAAACCCGCACGACTCG
ACCAACAAACCCACCACGAATCTCTAACGCTGATTCATGCAAGTAATGCG
CTTGTTTCGTTGTGTAGATGGGACAAGACACAGAGTTCACGGTGGACACA
TCTCTTGGGAAGCTTTGCAAGGCGAGGCAACTCCACTTCCAACACGAGAG
GCGAGAGCAGGGCTGATCTTTCAGGCCGCAAATTGAATGCCTTTTCCTTG
CCACACAGACATGCCCATGGCATGAAAATTGTCAAGGGACAATACATTAT
TATGGCATTTTTATGGTGGGGGTAACCCTAACCCGTCACGGTGTCATTTG
ATAATTTTTCCACCTTTCTACTTCCCCTGTGCTCGATCCATAATTGCTGC
TCTGCTTCGACTGCACCGTAAGTCGGCGGCCAACGCAGAGCAGCAAGAGG
CAGAGCGGACTCGAATTCGACAGAAATTGCCTTGATAGCCTTGGGCATTT
CACACATCTTTCCCATCACTTGGTAGCAAAGGAGGTTTTTGCTCAGCGGA
TAGGCTACAGTGCGCTATTGTTGCCACCAATTTTGACCCCGCTTGCAAAT
TCCCGCGGCTGGAGGGAGTAGTATTGCGAGTAGGATACTTCATTCTCCTT
GAGTCTCCTTCCCTTCGCTTACACACTTTCCCCTTTCCCCCCAGCCACAA
GCCCCTGCACGCAAGTCTCATTCCCCCGATCGGGGTCACCATAGACATGA
TTTATGGTGCTGTCGCGACGAGTGTGTACAGGGAGAAAGGGTGGTATCGC
GAAAGCCTCAGAGTTGCTGCTAAAGTGTCCCTTTGCTTTCGTTTAAGTGA
AGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGATATAGGAGGTCCCGG
CCACCTTTAAGGGCTTGGCCATCCTTGTTGCATTACATGCTCTGTCAATC
ACATGTATCTTGATCTTATCTGCCCGTCTCTTACCTACCCGAACCATATA
ACAGCGCTCCGCGTTTTGCCTCCTGCCTCCATCGCTCCCTCCTACACGTC
CTCGTCATCCTACCCCATCGCGAACGGGGCTAGGACCTTCGAGCAGCTAA
ACAGACACACTTCATCATCATGCTGGCGTGGACGACGAAGCGCTTGGCGG
CCACCGGCGTGCGCTGTGCAGCGGGCGCAAGCCTTGGAAGTGCCCGCTCT
TACCACGCCTCGGCGACGCGGCTGGTGAAGATTACGAAGCACGAGGTGTG
GCGGGATGATAATGAACAAGACAATCTGCCTAAGGTGAAGAAGCGCGACG
GCACAATTGCAGCCATTGAGAAAAAGCGTGGTTTTGTGGACTATCACCGT
AATCCCGACCCGTACCGTGATCCCTTGGACCGAGTCTTTGACTGGGGTGA
GATCAAGACGGACGAAGGGCACGACGAGGTAGAGCGGAAGGTGCAAGCAG
CCCGATGCATGGACTGTGGCACTCCCTTCTGTCAGACGCACACAGGCTGC
CCTGTGAACAACCTCATCCCCGAGTGGAACGAGCTGGTCTACAAGGGTCA
GTGGCGCGAGGCCATCGACCGACTGCACAAGACCAATAATTTCCCCGAAT
TCACCGGCTTAGTCTGCCCGGCCCCGTGCGAGGGTGGCTGCGTCGCGGGG
CTCGTGGACAAGCCGGTTACGATCAAGAATATCGAGTACGCGATTGTAGA
GCGCGCATGGGAGGAGGGATGGATCACGCCCCGCATTCCCCAGTACAGGA
GTGGGATGTCCGTGGCAGTGGTAGGGAGTGGCCCCAGCGGCCTGGCCGCC
GCCGACTGTCTGAATCAAATGGGGCATAAGGTGACGGTGTACGAGCGGGA
GGATCGGATCGGCGGCCTCCTCATGTACGGCATCCCTAACATGAAATTGG
ACAAGGAGAAGGTCTTGAGGCGGGTAGACATGCTCCGGGAGGAAGGCATT
GAGTTTGTGACCAATACCAACGTGGGAAAGGATGTGGCCGTAGAGGACCT
GCGGGCGAACGTGGATGCCCTCGTCCTCACCCTCGGCTCGACCGTCCCTC
GTGATCTCCGAGTGCCAAACCGAGAGGCGAACGGCATCCACTTCGCGATG
GAGTTTTTGACCAAGAACCAGAAGCGATTGATGATGACGCGCGAGGGCCG
GCTGGAGAGCGGGTGGGACAAGAGCTTCATCACCGCGGAGGGGAAGGACG
TAATCGTGGTCGGCGGCGGTGACACAGGCACGGACTGCATTGGCACTTCC
ATGCGCCACCGATGCAAGTCCATCGTTAACTTCGAGCTCATGCCGCGACC
TCCCAACGAGCGGGCTCCCCACAATCCCTGGCCCCAGTGGCCGAAAATTT
ATGGCACGGATTACGGCCACGCCGAGGTGCAAGCGGTCTTCGGCAAGGAC
CCGCGGGAGTACTCAGTCATGACCAAAGAGTTCCTCAGGGACGAGAAGGG
CAACGTCAAGGGCTTGGTGACGGTGAACGTGGAGGTGTCAGCCAAGGGCA
TAAAACCGATCGCCGGCACGGAGAAGGAGTGGCCGGCCGACCTCGTTATT
CTCGCCATGGGATTCATGAACCCTGAAGTGACCATCCCACAAGCCCTCTC
CCTGGACGTGGATCAGCGCCACAACATCCGCGCAGAATACGGCGACTACA
GGACGAACATCGACGGGGTTTTCGCCGCGGGCGACTGTCGGAGGGGTCAG
TCTCTGGTGGTATGGGCCATCAATGAAGGCCGAGGCGTGGCGGAGAGCGT
GAACAAGTTCTTGATCGAAAAGTCCGAGGTCACGGAAGACGAAGCTTATA
TTGGGGCTATGTAGGGAGGGAGGGAGGGAGGGAGGG
back to top

protein sequence of NO08G04040.1

>NO08G04040.1-protein ID=NO08G04040.1-protein|Name=NO08G04040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=565bp
MLAWTTKRLAATGVRCAAGASLGSARSYHASATRLVKITKHEVWRDDNEQ
DNLPKVKKRDGTIAAIEKKRGFVDYHRNPDPYRDPLDRVFDWGEIKTDEG
HDEVERKVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVYKGQWREAID
RLHKTNNFPEFTGLVCPAPCEGGCVAGLVDKPVTIKNIEYAIVERAWEEG
WITPRIPQYRSGMSVAVVGSGPSGLAAADCLNQMGHKVTVYEREDRIGGL
LMYGIPNMKLDKEKVLRRVDMLREEGIEFVTNTNVGKDVAVEDLRANVDA
LVLTLGSTVPRDLRVPNREANGIHFAMEFLTKNQKRLMMTREGRLESGWD
KSFITAEGKDVIVVGGGDTGTDCIGTSMRHRCKSIVNFELMPRPPNERAP
HNPWPQWPKIYGTDYGHAEVQAVFGKDPREYSVMTKEFLRDEKGNVKGLV
TVNVEVSAKGIKPIAGTEKEWPADLVILAMGFMNPEVTIPQALSLDVDQR
HNIRAEYGDYRTNIDGVFAAGDCRRGQSLVVWAINEGRGVAESVNKFLIE
KSEVTEDEAYIGAM*
back to top

mRNA from alignment at chr8:1133146..1138807-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G04040.1 ID=NO08G04040.1|Name=NO08G04040.1|organism=Nannochloropsis oceanica|type=mRNA|length=5662bp|location=Sequence derived from alignment at chr8:1133146..1138807- (Nannochloropsis oceanica)
CCTACCTGTTTGAGTGTGTGTTGGGTGGTGTAAAGTGAGTAAAAGTGTAA AGTGGATGGGTGCAACCGTGGCAGCAGTTGCGGAGCAGGGGGAGGCTGAA AGCTGACTTAGAGCCACTCAACAAAACTGGCGACGCGGATCTGGTCCCGT GCTAAACTCCATTGTCTGACCCAGCAATGTGTAATATGCCTGTGGTCGTC GGTCATGATCTATTTGCCGTGCTGGCCTCGAGGAGGGTAAGATAGCCTTT CTACAGGCCGTGTAAGAGGAGGAAAGTGAACTGCCTGCGAGTCGCCTCTT CAGAGACCCTGCCCTTCAATTGCCGCACGCTGTAAAACCCGCACGACTCG ACCAACAAACCCACCACGAATCTCTAACGCTGATTCATGCAAGTAATGCG CTTGTTTCGTTGTGTAGATGGGACAAGACACAGAGTTCACGGTGGACACA TCTCTTGGGAAGCTTTGCAAGGCGAGGCAACTCCACTTCCAACACGAGAG GCGAGAGCAGGGCTGATCTTTCAGGCCGCAAATTGAATGCCTTTTCCTTG CCACACAGACATGCCCATGGCATGAAAATTGTCAAGGGACAATACATTAT TATGGCATTTTTATGGTGGGGGTAACCCTAACCCGTCACGGTGTCATTTG ATAATTTTTCCACCTTTCTACTTCCCCTGTGCTCGATCCATAATTGCTGC TCTGCTTCGACTGCACCGTAAGTCGGCGGCCAACGCAGAGCAGCAAGAGG CAGAGCGGACTCGAATTCGACAGAAATTGCCTTGATAGCCTTGGGCATTT CACACATCTTTCCCATCACTTGGTAGCAAAGGAGGTTTTTGCTCAGCGGA TAGGCTACAGTGCGCTATTGTTGCCACCAATTTTGACCCCGCTTGCAAAT TCCCGCGGCTGGAGGGAGTAGTATTGCGAGTAGGATACTTCATTCTCCTT GAGTCTCCTTCCCTTCGCTTACACACTTTCCCCTTTCCCCCCAGCCACAA GCCCCTGCACGCAAGTCTCATTCCCCCGATCGGGGTCACCATAGACATGA TTTATGGTGCTGTCGCGACGAGTGTGTACAGGGAGAAAGGGTGGTATCGC GAAAGCCTCAGAGTTGCTGCTAAAGTGTCCCTTTGCTTTCGTTTAAGTGA AGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCGATATAGGAGGTCCCGG CCACCTTTAAGGGCTTGGCCATCCTTGTTGCATTACATGCTCTGTCAATC ACATGTATCTTGATCTTATCTGCCCGTCTCTTACCTACCCGAACCATATA ACAGCGCTCCGCGTTTTGCCTCCTGCCTCCATCGCTCCCTCCTACACGTC CTCGTCATCCTACCCCATCGCGAACGGGGCTAGGACCTTCGAGCAGCTAA ACAGACACACTTCATCATCATGCTGGCGTGGACGACGAAGCGCTTGGCGG CCACCGGCGTGCGCTGTGCAGCGGGCGCAAGCCTTGGAAGTGCCCGCTCT TACCAGTAAGTTAACACAGGGGTTAAATGAGAGGAGGGGGAAAGATGAGG GGAAGATGAGGTGGAGTGGGACGGAGCGCCGTCAAGCACGCATGTACTCA CGCCCCTCTGCACACTACAGCGCCTCGGCGACGCGGCTGGTGAAGATTAC GAAGCACGAGGTGTGGCGGGATGATAATGAACAAGACAATCTGCCTAAGG TAAGTGGCAGGGCCTGTGGCCTGTGCTTCTCTTCTCGCCCGTCGCAGCTT TCTTCCCTCCCTTCTTCCCTCCCTTCCTCTCTCTCTTCTTCCTTGTTCTG TTGGTCTATCAGGAGAGCATTATTTGTTCCTCACCCAAGGCGCATCCGCT CACCCCTGCTCTCCCCCTATCTTCCTCCCCTCCGTTCCCCCCCTTCCTCC CTTCTTTCCATCTCTTTATCTGCAGGTGAAGAAGCGCGACGGCACAATTG CAGCCATTGAGAAAAAGCGTGGTTTTGTGGACTATCACCGTAATCCCGAC CCGTACCGTGATCCCTTGGACCGAGTCTTTGACTGGGGTAGGGAAGGAGG GAGGGAGGGAGGGAGGGAGATGAGGTAATTGGCTTGGCGTAGGAAATGCA AACACGTAGTGTATGGGACGGATAGATATTCTCGACGATCCTCTCAACCC CCTCTCCCTCCCTCCCTCCCTCTTTCTGTGACTTGCCAAGGTGAGATCAA GACGGACGAAGGGCACGACGAGGTAGAGCGGAAGGTGCAAGCAGCCCGAT GCATGGACTGTGGCACTCCCTTCTGTCAGACGCACACAGGGTAGGGAGGG AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAAGAAAGGACGGGAGGAA AGGAGGAAAGGGATTAAAACCCACCGTATTTCTATAATCCTTACAATTAC TTCGCATCGATCAAGAATTAATCCTTCCTTCCTTCCCTCCCTCCCTCCCT CCCTCCCTCCCTCCCTCCTCCTTCCCAGCTGCCCTGTGAACAACCTCATC CCCGAGTGGAACGAGCTGGTCTACAAGGGTCAGTGGCGCGAGGCCATCGA CCGACTGCACAAGACCAATAATTTCCCCGAATTCACCGGCTTAGTCTGCC CGGCCCCGTGCGAGGTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG GGAGGGAGGGAGGGAGGGAGCGGGCCACTGTGGAAATAACAAGCGAGGTT GGTTTGACTCTGCCTTTTTTAACACCGTGCACATCCTCCCTCCTTCTCCC TCCCTCCTTCCCTTCTTTTCTCTTCCAGGGTGGCTGCGTCGCGGGGCTCG TGGACAAGCCGGTTACGATCAAGAATATCGAGTACGCGATTGTAGAGCGC GCATGGGAGGTACGATCATCCCTCCCTCCCTCGCCCCCCTCCCTCCCTCT CTGCTTGCCCCTCTCACCCCCCCCCTCCCCGCCTACCCCCTCCCCATCCA CACCCACATCCCCCTCCCTCCCTCCTCCCCCCCCTCCCATCATACAGGAG GGATGGATCACGCCCCGCATTCCCCAGTACAGGAGTGGGATGTCCGTGGC AGTGGTAGGGAGTGGCCCCAGCGGCCTGGCCGCCGCCGACTGTCTGAATC AAATGGGGCATAAGGTAGGGAGAGAGGGAGGGAGAGAGGGAGGGAGGGAG GGAGGGAGGGAGGGAGGGAGGGGGGAAAGAAGGGTTTCACATATGTATAT GCAGGTTTCGGACTATTTTGGCGCGAAATCGGTGGAAATCAGATGCACTC ACGTCAAAACGAGCCTCTCACCTTCCCTCCCTCCCTCCCTCCCTCCCTCC CTCCCTCCCTCCCTCCCTCCCCACCCAGGTGACGGTGTACGAGCGGGAGG ATCGGATCGGCGGCCTCCTCATGTACGGCATCCCTAACATGAAATTGGAC AAGGAGAAGGTCTTGAGGCGGGTAGACATGCTCCGGGAGGAAGGTGAGGG AGGGAGGAAGGAAGGGAGGAAGGAAGGGAAGGAGGGAGGGAGGGCGGTGT CCCACAGTTCAAGACTTATCCATTCGTCCACGTAAATGAATCCTCTACCC TCCACTCACTGCCCCCCTCCCCCCCTCCCCTCCCTCCCTCCCTCCTGCCC TGCAGGCATTGAGTTTGTGACCAATACCAACGTGGGAAAGGATGTGGCCG TAGAGGACCTGCGGGCGAACGTGGATGCCCTCGTCCTCACCCTCGGCTCG ACCGTCCCTCGTGATCTCCGAGTGCCAAACCGAGAGGTCCGTCCGCCCCT CGCTTCCTCCCTCCCTCCCTCCCGTTTGAATGAGATGTGCCATATCTAGA CACGGTGGGGGATGATAAACAGTCTTATGCACCCACCCCCCCTCCCTCCC TCCCTCCCTCCCTCAGGCGAACGGCATCCACTTCGCGATGGAGTTTTTGA CCAAGAACCAGAAGCGATTGATGATGACGCGCGAGGGCCGGCTGGAGAGC GGGTGGGACAAGGTAGGCGTCAGTGAAGGAAAGGGAGGGAGGGGAGGGGG TTGAGGCCAAGCCTTTAGCGACTACGGGGTAATGGGGATGTGGGTTTCTT ATCAATCAAATCCACTCCTCTTTCTCACATGCTTTTGAATCTAATTGATC ATACCACAACACTCTATATACTCTGTGTAGTATATAATCATAAATCTAAT CTACTCCTCTTTATCACCATAGAGCTTCATCACCGCGGAGGGGAAGGACG TAATCGTGGTCGGCGGCGGTGACACAGGTAAGGCAATACACCCTTTCCTC CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCACCCTCCCTCCCTCCCTCCT TCCCATTCACCCACCACCCTCCCTCCCTCCCACCCCCCTCTCCCAGGCAC GGACTGCATTGGCACTTCCATGCGCCACCGATGCAAGTCCATCGTTAACT TCGAGCTCATGCCGCGACCTCCCAACGAGCGGGCTCCCCACAATCCCTGG CCCCAGTGGCCGAAAATTTATGGCACGGATTACGGCCACGCCGGTTCGTG CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCCTCCCTCCTAGT CGTCCTTGTTCTTGCCAAGTCAGCCACATCTCGATCGGCCCTCCCGCCCT CCCTCCCTCCCTCCCTCCCTCCCCCCCTCTCTCCCTCCCTGCAGAGGTGC AAGCGGTCTTCGGCAAGGACCCGCGGGAGTACTCAGTCATGACCAAAGAG TTCCTCAGGGACGAGAAGGTAGGGAGGGAAAGAGGGAAGGAAGCAAGGAG GGAGGAAGGGAGGGATGGGAGAGATGGGAGGAGGGAGGGAGAAGGAAAAG AATGAATTTTTCGTAATTGAGGAGCCTAGCACCGTTTCCTCACCCTTCCC TCCCTCCCTCCCTCCCTCCCTTGCTTGCAGGGCAACGTCAAGGGCTTGGT GACGGTGAACGTGGAGGTGTCAGCCAAGGGCATAAAACCGATCGCCGGCA CGGAGAAGGAGTGGCCGGCCGACCTCGTTATTCTCGCCATGGGATTCATG AACCCTGAAGGTACACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC CGTCGCTGCTTCCGACGATAATACGAAGGACTTCGCGCTGCCGGTCCTCA TCTCACCCCCCCCCCTTCCTTTCTTTTCCCCTCCCCTCCTCCCTCCCTCC CTCCCTCCCTCCCTCCCTCCCTCCCTCCAGTGACCATCCCACAAGCCCTC TCCCTGGACGTGGATCAGCGCCACAACATCCGCGCAGAATACGGCGACTA CAGGACGAACATCGACGGGGTTTTCGCCGCGGGCGACTGTCGGAGGGGTC AGTCTCTGGTGGTATGGGCCATCAATGAAGGCCGAGGCGTGGCGGAGAGC GTGAACAAGTTCTTGATCGGTGGGTCTTCCCCTCCCTCCCTCCTTCCTTC CCTTCCTCCTTCAACCACTCTCTCGCTACCCCCTTCCCTTCTTTCCACCC TTCCTCCCTCCTTCCCTCCCTCCCTCCTTTCTCTATCCATTTCCAGTTTT CCAAACCTTTTCCCCCTTGGGGTTCACCGACTTATATGCTTCCCACCCTC CCTGCCTCCCTCCCTGCCTCCCTCCCTCCCTCCCGTCTCACAGAAAAGTC CGAGGTCACGGAAGACGAAGCTTATATTGGGGCTATGTAGGGAGGGAGGG AGGGAGGGAGGG
back to top

Coding sequence (CDS) from alignment at chr8:1133146..1138807-

>NO08G04040.1 ID=NO08G04040.1|Name=NO08G04040.1|organism=Nannochloropsis oceanica|type=CDS|length=1695bp|location=Sequence derived from alignment at chr8:1133146..1138807- (Nannochloropsis oceanica)
ATGCTGGCGTGGACGACGAAGCGCTTGGCGGCCACCGGCGTGCGCTGTGC
AGCGGGCGCAAGCCTTGGAAGTGCCCGCTCTTACCACGCCTCGGCGACGC
GGCTGGTGAAGATTACGAAGCACGAGGTGTGGCGGGATGATAATGAACAA
GACAATCTGCCTAAGGTGAAGAAGCGCGACGGCACAATTGCAGCCATTGA
GAAAAAGCGTGGTTTTGTGGACTATCACCGTAATCCCGACCCGTACCGTG
ATCCCTTGGACCGAGTCTTTGACTGGGGTGAGATCAAGACGGACGAAGGG
CACGACGAGGTAGAGCGGAAGGTGCAAGCAGCCCGATGCATGGACTGTGG
CACTCCCTTCTGTCAGACGCACACAGGCTGCCCTGTGAACAACCTCATCC
CCGAGTGGAACGAGCTGGTCTACAAGGGTCAGTGGCGCGAGGCCATCGAC
CGACTGCACAAGACCAATAATTTCCCCGAATTCACCGGCTTAGTCTGCCC
GGCCCCGTGCGAGGGTGGCTGCGTCGCGGGGCTCGTGGACAAGCCGGTTA
CGATCAAGAATATCGAGTACGCGATTGTAGAGCGCGCATGGGAGGAGGGA
TGGATCACGCCCCGCATTCCCCAGTACAGGAGTGGGATGTCCGTGGCAGT
GGTAGGGAGTGGCCCCAGCGGCCTGGCCGCCGCCGACTGTCTGAATCAAA
TGGGGCATAAGGTGACGGTGTACGAGCGGGAGGATCGGATCGGCGGCCTC
CTCATGTACGGCATCCCTAACATGAAATTGGACAAGGAGAAGGTCTTGAG
GCGGGTAGACATGCTCCGGGAGGAAGGCATTGAGTTTGTGACCAATACCA
ACGTGGGAAAGGATGTGGCCGTAGAGGACCTGCGGGCGAACGTGGATGCC
CTCGTCCTCACCCTCGGCTCGACCGTCCCTCGTGATCTCCGAGTGCCAAA
CCGAGAGGCGAACGGCATCCACTTCGCGATGGAGTTTTTGACCAAGAACC
AGAAGCGATTGATGATGACGCGCGAGGGCCGGCTGGAGAGCGGGTGGGAC
AAGAGCTTCATCACCGCGGAGGGGAAGGACGTAATCGTGGTCGGCGGCGG
TGACACAGGCACGGACTGCATTGGCACTTCCATGCGCCACCGATGCAAGT
CCATCGTTAACTTCGAGCTCATGCCGCGACCTCCCAACGAGCGGGCTCCC
CACAATCCCTGGCCCCAGTGGCCGAAAATTTATGGCACGGATTACGGCCA
CGCCGAGGTGCAAGCGGTCTTCGGCAAGGACCCGCGGGAGTACTCAGTCA
TGACCAAAGAGTTCCTCAGGGACGAGAAGGGCAACGTCAAGGGCTTGGTG
ACGGTGAACGTGGAGGTGTCAGCCAAGGGCATAAAACCGATCGCCGGCAC
GGAGAAGGAGTGGCCGGCCGACCTCGTTATTCTCGCCATGGGATTCATGA
ACCCTGAAGTGACCATCCCACAAGCCCTCTCCCTGGACGTGGATCAGCGC
CACAACATCCGCGCAGAATACGGCGACTACAGGACGAACATCGACGGGGT
TTTCGCCGCGGGCGACTGTCGGAGGGGTCAGTCTCTGGTGGTATGGGCCA
TCAATGAAGGCCGAGGCGTGGCGGAGAGCGTGAACAAGTTCTTGATCGAA
AAGTCCGAGGTCACGGAAGACGAAGCTTATATTGGGGCTATGTAG
back to top
Synonyms
Publications