NO08G00220.1, NO08G00220.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO08G00220.1
Unique Name	NO08G00220.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2719
Alignment location	chr8:85061..89907 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr8	genome	chr8:85061..89907 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO08G00220.1 vs.
Match: XP_002177281.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1]; EEC51744.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 190.3 bits (482), Expect = 2.500e-44
Identity = 202/688 (29.36%), Postives = 292/688 (42.44%), Query Frame = 0

Query:  187 PPSMSNSSSLASLRPPPPTPG-VTPPSSKIENEGEGDRGDSIN-SNLLPAFATPSKQTPGTGRKGSAARRRYTVSPMLSRTPKKMEPRLGDMVLKAAVDTAACLTSPISDWKKQKAVFDACALSRATPEHNKIQA-LASSLASEPSLAKARSTRLAMLAPDGQTPLHCAAAMNNMTALN-LLLLAPETDCF-AVDLQGRTALHLAATNGHLEACRLLKHEMTRRAEGGREGGREGGQAPVGMAAPVDLSGRTPLGWRVS-----AAGEKKELEEELFALGDPSIF----PTVPLQARTGGERLGFGYCSTPGWQPKMEDTVCVQTPLGGGGGGGGGGIGEGEGGRGDGGDEGVGEEDGLFAVFDGHQGL-LCAEFAANHLVETLFESRAWRRGRAGGREEEEEEKGEEGGWVREALIETCLSLDRKLAELPDFQMKEEHTMGVGSMAHKVLSSKLVSADSSGSTAVICLVTPSLVACANLGDSRAVLLARKGGSDDDIDDPSAPLSLH-------------------ALPLSFDHKPELESEKQRVEAAGGLVKGMNVAPDKDSAPVLIWRVYPREGTADSLAMTRALGDFAYKRKLGLGVEEQMIIPLPDVHLHPRGPADEFLVLACDGVWDVFSNDEIAVYVENHVNATRDGGRKSTYLAELADDIVKESMRRGSRDNITALVVRL 841
            PPS +    +  +     TPG V    +K  +E    + ++   +   P F TPS  TP T            +          +E R    VL A  DTA  L SP    K  K VF    L+ A P ++K+Q  L   ++++PS+ KARS  +  L PDG TP   AA  N + A   LLLL P T+    V+LQG++A HLAAT G+LE    +K        G                 PVDL GRTPLG  ++     A   K+ + + LF+  D SI     P     A     +L +G    PG +   ED +     L                      D  V    G+F VFDGH      + F A+ +   L               +  ++ G+   W R A    CL +D  L +                           S  + GSTAV  ++T   +  AN+GDSR +L+     S  ++ +    LS+                       LS DHKPE  +E  R++AAG  +       ++D   V+I +V   +G  + +A +R+ GDF YK    L  E Q I+ +PDV +H R  AD +LVLACDG+WDV S+DE+  +V  H+ +    G     L E+ D ++ E ++RGS DN++A+VV L
Sbjct:   43 PPSEAFQQRVQCIHCHKYTPGMVVQQPAKASSEAASTQSNARRLTPTTPGFHTPSPTTPLTQSSDHVNGSEVHL----------VEHR----VLLAVRDTAFDLASPEFAKKSSKDVFRW--LASAQPINDKLQKRLERRISADPSICKARSHGMEPLCPDGLTPFLLAAHSNQVAAAKILLLLGPRTEQLQTVNLQGKSAYHLAATRGNLEFLDYIKTVYEDPQNG----------TLFSSPTPVDLLGRTPLGAALTSPEPQAKRNKQTMMDRLFSPQDMSILGSPAPVTQRTATLSELQLAYGSSHMPGKRIMNEDAILTTKIL-------------------LSDDSTV----GVFGVFDGHSDAGKVSNFIASQIPHAL--------------RDAMQQAGDWNSWCRHA----CLEIDANLKK---------------------------SNIAGGSTAVFAIITLDQIVVANVGDSRCILVQHDSVSVSNVAEGVERLSISETVYPQTGTETNTLSGAFLVKALSEDHKPEASAEHARIQAAGMTITEERF--EEDGEEVVIHKVRLSDG--NRMACSRSFGDFEYKANETLEAESQAIVAVPDVVVHERSHADCYLVLACDGIWDVMSSDEVGQFVVEHIKSC---GETEGVLPEVGDRLLAECLQRGSGDNLSAVVVAL 629

The following BLAST results are available for this feature:

BLAST of NO08G00220.1 vs.

BLAST of NO08G00220.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_002177281.1	2.500e-44	29.36	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO08G00220	NO08G00220	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO08G00220.1	NO08G00220.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO08G00220.1.cds1	NO08G00220.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds2	NO08G00220.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds3	NO08G00220.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds4	NO08G00220.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds5	NO08G00220.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds6	NO08G00220.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds7	NO08G00220.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds8	NO08G00220.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds9	NO08G00220.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds10	NO08G00220.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds11	NO08G00220.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds12	NO08G00220.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00220.1.cds13	NO08G00220.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr8:85061..89907+
coding sequence from alignment at chr8:85061..89907+

mRNA sequence

>NO08G00220.1 ID=NO08G00220.1|Name=NO08G00220.1|organism=Nannochloropsis oceanica|type=mRNA|length=2719bp
AGGGGATAAAATGGTTCCGAGGAGGGCAGCTCGGCTGCCACTACAAGCAC
AGCCAAGTTATATTCAATTCATATATAAGCTATTTGTTAATCCGAAATTC
ACCTTGAGACCATGTCCCAAGGTGACGTATGCGCTTCAGATTCGGCGAGT
GTTCTGTGTCGAGTGTTCTTGTCTTGGTCGTAGCTCATGGACAATCACTA
CCCACCAACAACCCAGCCACAAGCCACCGCAGGCAACCCCTTCTCCCCAA
GAGCATCATGTTTAGCTCTCTTTTGAGCGGCACTTTAGGCGAGATCCTGG
CGCCTTCCCCTTCTGTATCCGCTGAGAAGAAGGAACCATCATCAGAGCAG
GAGCAGCAGGAGCAGCAGCAACAGGAAGCAAGCGGTCAGGGTGCGCAAAC
CTACTCGATTCCACGGCAAGAAGAGGACGCAGCAGCGCGTGCAAGTGTGA
ACAAGACCCTCGCGGATGCCTCAACGCTCTTTCCCTTTCCCGAGGTCGAG
AAGAGAGCCGCCCCCTCTCCTTCGCCTACCGGTGTGACCCCTACTGCCGC
CATGACAGACCCCGCGGCTACAGACGTGACGGGCATGCTCGCCAACCTGT
CGCTCGCGGATGAGAAGAAAGAGCAAGAGCAAGAGCAACAGACCGGTCGA
CAGAGCGCGGCAGCCGTCCTGATGCCTCCCCCTCCCCCTCCGTCGATGTC
CAACTCTTCCTCCCTGGCCTCTTTGCGCCCCCCGCCGCCCACCCCAGGAG
TCACTCCCCCCAGCTCTAAAATTGAGAATGAAGGAGAAGGTGATAGAGGT
GATAGCATCAATAGCAACCTTCTTCCTGCCTTCGCCACGCCTTCCAAGCA
GACGCCGGGTACGGGCAGGAAGGGGTCTGCGGCCCGTCGGCGCTATACGG
TCAGTCCGATGCTCTCCCGCACACCCAAAAAGATGGAGCCGAGGTTGGGA
GACATGGTGCTGAAGGCGGCCGTCGACACCGCAGCGTGTCTGACGAGCCC
CATCAGTGACTGGAAGAAGCAGAAGGCCGTCTTTGATGCCTGTGCGCTTT
CGCGGGCCACCCCCGAGCATAACAAGATACAAGCCCTTGCTTCCTCCCTC
GCCTCCGAGCCGTCTCTTGCCAAGGCCCGTAGCACGCGTTTGGCGATGCT
CGCTCCTGATGGACAGACACCCCTCCACTGTGCCGCGGCGATGAACAACA
TGACTGCGCTTAATTTATTGCTCCTAGCGCCGGAGACAGACTGCTTTGCC
GTGGACTTGCAGGGTCGGACAGCCCTCCACCTCGCCGCTACCAACGGTCA
CCTGGAAGCCTGCCGTCTTCTAAAGCACGAGATGACGCGTAGAGCCGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGCAGGCACCGGTAGGGATGGCG
GCGCCGGTTGATCTGTCGGGAAGAACGCCGTTGGGATGGAGGGTGTCAGC
AGCAGGGGAAAAGAAGGAGCTGGAGGAGGAGCTCTTTGCGTTGGGAGACC
CGTCCATCTTCCCCACGGTGCCCCTGCAGGCCCGGACGGGGGGTGAGAGA
CTCGGCTTCGGCTACTGCTCCACGCCGGGTTGGCAGCCTAAGATGGAGGA
CACGGTTTGCGTGCAGACGCCTCTAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAATAGGAGAAGGGGAGGGCGGGAGGGGGGACGGGGGGGACGAAGGA
GTAGGGGAGGAGGACGGTCTTTTCGCTGTGTTCGATGGACACCAAGGCCT
CCTGTGTGCGGAGTTCGCCGCCAACCACCTCGTGGAGACCCTCTTCGAGT
CCCGGGCCTGGCGCCGGGGGAGGGCGGGGGGGCGGGAGGAGGAGGAGGAG
GAGAAGGGGGAGGAGGGGGGATGGGTGCGGGAGGCACTGATTGAGACTTG
CCTCTCCCTCGATCGGAAACTGGCAGAGCTGCCGGACTTTCAGATGAAGG
AGGAGCATACGATGGGGGTGGGTAGCATGGCCCATAAGGTGCTTTCCTCG
AAGCTGGTCTCGGCAGACTCGAGTGGGAGCACGGCGGTCATCTGCCTAGT
GACTCCCTCTCTAGTCGCCTGCGCAAATCTGGGAGACAGCCGGGCGGTGC
TGCTGGCCAGGAAGGGAGGGAGCGACGACGACATTGACGATCCTTCCGCC
CCTCTCTCCCTGCATGCCCTGCCCCTCTCCTTCGACCACAAACCCGAGTT
GGAGAGCGAGAAACAGCGGGTGGAGGCCGCGGGAGGGTTAGTGAAGGGAA
TGAATGTGGCCCCGGACAAGGACAGTGCGCCCGTGTTGATTTGGCGCGTC
TATCCCCGTGAAGGTACGGCGGACTCTCTGGCTATGACCCGAGCCCTCGG
CGATTTCGCCTACAAGCGCAAGCTCGGCTTGGGGGTGGAGGAGCAGATGA
TCATCCCCTTGCCTGACGTCCATCTGCACCCGCGCGGGCCTGCGGACGAA
TTCCTGGTGTTGGCCTGCGATGGTGTCTGGGACGTGTTTTCCAACGATGA
GATCGCTGTCTATGTGGAGAATCACGTGAATGCGACCAGAGACGGAGGAC
GGAAGTCCACCTACCTGGCCGAGCTCGCGGACGACATCGTGAAGGAAAGC
ATGCGCCGAGGCTCCCGAGACAACATTACGGCACTGGTGGTGCGTCTCCG
CGCACCGGATGATGGGGAACGCCGAACTTTGTTTATGTGACGAGAGAAGG
GTGGTTGGGCAGGAGGGAG

protein sequence of NO08G00220.1

>NO08G00220.1-protein ID=NO08G00220.1-protein|Name=NO08G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=854bp
MRFRFGECSVSSVLVLVVAHGQSLPTNNPATSHRRQPLLPKSIMFSSLLS
GTLGEILAPSPSVSAEKKEPSSEQEQQEQQQQEASGQGAQTYSIPRQEED
AAARASVNKTLADASTLFPFPEVEKRAAPSPSPTGVTPTAAMTDPAATDV
TGMLANLSLADEKKEQEQEQQTGRQSAAAVLMPPPPPPSMSNSSSLASLR
PPPPTPGVTPPSSKIENEGEGDRGDSINSNLLPAFATPSKQTPGTGRKGS
AARRRYTVSPMLSRTPKKMEPRLGDMVLKAAVDTAACLTSPISDWKKQKA
VFDACALSRATPEHNKIQALASSLASEPSLAKARSTRLAMLAPDGQTPLH
CAAAMNNMTALNLLLLAPETDCFAVDLQGRTALHLAATNGHLEACRLLKH
EMTRRAEGGREGGREGGQAPVGMAAPVDLSGRTPLGWRVSAAGEKKELEE
ELFALGDPSIFPTVPLQARTGGERLGFGYCSTPGWQPKMEDTVCVQTPLG
GGGGGGGGGIGEGEGGRGDGGDEGVGEEDGLFAVFDGHQGLLCAEFAANH
LVETLFESRAWRRGRAGGREEEEEEKGEEGGWVREALIETCLSLDRKLAE
LPDFQMKEEHTMGVGSMAHKVLSSKLVSADSSGSTAVICLVTPSLVACAN
LGDSRAVLLARKGGSDDDIDDPSAPLSLHALPLSFDHKPELESEKQRVEA
AGGLVKGMNVAPDKDSAPVLIWRVYPREGTADSLAMTRALGDFAYKRKLG
LGVEEQMIIPLPDVHLHPRGPADEFLVLACDGVWDVFSNDEIAVYVENHV
NATRDGGRKSTYLAELADDIVKESMRRGSRDNITALVVRLRAPDDGERRT
LFM*

mRNA from alignment at chr8:85061..89907+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO08G00220.1 ID=NO08G00220.1|Name=NO08G00220.1|organism=Nannochloropsis oceanica|type=mRNA|length=4847bp|location=Sequence derived from alignment at chr8:85061..89907+ (Nannochloropsis oceanica)
AGGGGATAAAATGGTTCCGAGGAGGGCAGCTCGGCTGCCACTACAAGCAC
AGCCAAGTTATATTCAATTCATATATAAGCTATTTGTTAATCCGAAATTC
ACCTTGAGACCATGTCCCAAGGTGACGTATGCGCTTCAGATTCGGCGAGT
GTTCTGTGTCGAGTGTTCTTGTCTTGGTCGTAGCTCATGGACAATCACTA
CCCACCAACAACCCAGCCACAAGCCACCGCAGGCAACCCCTTCTCCCCAA
GAGCATCATGTTTAGCTCTCTTTTGAGCGGCACTTTAGGCGAGATCCTGG
CGCCTTCCCCTTCTGTATCCGCTGAGAAGAAGGAACCATCATCAGAGCAG
GAGCAGCAGGAGCAGCAGCAACAGGAAGCAAGCGGTCAGGGTGCGCAAAC
CTACTCGATTCCACGGCAAGAAGAGGACGCAGCAGCGCGTGCAAGTGTGA
ACAAGACCCTCGCGGATGCCTCAACGCTCTTTCCCTTTCCCGAGGTCGAG
AAGAGAGCCGCCCCCTCTCCTTCGCCTACCGGTGTGACCCCTACTGCCGC
CATGACAGACCCCGCGGCTACAGACGTGACGGGCATGCTCGCCAACCTGT
CGCTCGCGGATGAGAAGAAAGAGCAAGAGCAAGAGCAACAGACCGGTCGA
CAGAGCGCGGCAGCCGTCCTGATGCCTCCCCCTCCCCCTCCGTCGATGTC
CAACTCTTCCTCCCTGGCCTCTTTGCGCCCCCCGCCGCCCACCCCAGGAG
TCACTCCCCCCAGCTCTAAAATTGAGAATGAAGGAGAAGGTGATAGAGGT
GATAGCATCAATAGCAACCTTCTTCCTGCCTTCGCCACGCCTTCCAAGCA
GACGCCGGGTACGGGCAGGAAGGGGTCTGCGGCCCGTCGGCGCTATACGG
TCAGTCCGATGCTCTCCCGCACACCCAAAAAGATGGAGCCGAGGTTGGGA
GACATGGTGCTGAAGGTAGGCCAGGAAGGAAGGAGGGAAGGAGGGAAGGA
AGGAGAGACACTCACGCACCGACAAGGAGTCACACTCACGCATCGACACA
ACGATTCTAACGCGCCATATGCCTGTGGACTGTGGATCCCGTCCCTCCCC
CCCCTCCCCCCCTGTAGGCGGCCGTCGACACCGCAGCGTGTCTGACGAGC
CCCATCAGTGACTGGAAGAAGCAGAAGGCCGTCTTTGATGCCTGTGCGCT
TTCGCGGGCCACCCCCGAGCATAACAAGATACAAGTATGGAGGGGGTAGG
GAGGAAGGAGGGAGGGAAGGAGGGAGGAAGGAAGACGGCCCAGCCAGGTC
CAACGGGGAGAAAGTTTCCATCACGCCGCTTCCTTTCAATCCCTCCCTCC
CGCCCTCAATCCCTCCCTCCCCCAGGCCCTTGCTTCCTCCCTCGCCTCCG
AGCCGTCTCTTGCCAAGGCCCGTAGCACGCGTTTGGCGATGCTCGCTCCT
GATGGACAGACACCCCTCCACTGTGCCGCGGCGATGAACAACATGACTGC
GCTTAATTTATTGCTCCTAGCGCCGGAGACAGACTGCTTTGCCGTGGACT
TGCAGGGGTGAGGAAGGAGGGAGGGAGGGAGGGAGCGAGAGAGGGAGGGA
GGGCTTGAGGGAGGGAAGGGAGGGGGAGACCTCATGTAAACATCACCCAC
CCCCATTGGAGTCTCTGACATATGCTTCGACGTGCACCCTCTCATGCACA
CAAAACCTTCCCGCCTCCTCCTTTCCCTCCCTTCCGCCCTCTCTCCCTCT
TTCCCTGCCTCCTCCCTAGTCGGACAGCCCTCCACCTCGCCGCTACCAAC
GGTCACCTGGAAGCCTGCCGTCTTCTAAAGCACGAGATGACGCGTAGAGC
CGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCAGGCACCGGTAGGGA
TGGCGGCGCCGGTTGATCTGTCGGGAAGAACGCCGTTGGGATGGAGGGTG
TCAGCAGCAGGGGAAAAGAAGGAGCTGGAGGAGGTGGGTAGAGCTTCTAT
TCTTGTCTAGATGTTTCTCGTACCTTGCCTCCTCTTGCGCGTTGGGTTGG
GGCCCTTGGAATCCTTTTTCCTCCCTCCCTCCTTCCCTCCCTGCGCGTAA
TCCGTCGGGGGGACTGGCTGTGCCTGCATTGACTTCCTCCCTGCCTCAAT
CCTCCCCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCTCTCATTTCAATCG
CAGGAGCTCTTTGCGTTGGGAGACCCGTCCATCTTCCCCACGGTGCCCCT
GCAGGCCCGGACGGGGGGTGAGAGACTCGGCTTCGGTAGGAAGGGGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAAGGATTGCAAATT
TAAGTTCATTTCCTATTCTGAGCTCATGTTTTTCGCCTTATTTTTAATTT
GTTCGAATACTTTCATGCCCCTTCCTCCATTCCCTCCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCCTTTTAAGGCTACTGCTCCACGCCGGGTTGGCA
GCCTAAGATGGAGGACACGGTTTGCGTGCAGACGCCTCTAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAATAGGAGAAGGGGAGGGCGGGAGGGGGGAC
GGGGGGGACGAAGGAGTAGGGGAGGAGGACGGTCTTTTCGCTGTGTTCGA
TGGACACCAAGGTGAGGAGGAGAAGATGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAAGGAAGGAAGATGTGAA
TGAACCACCCTCGCACTTCCGGCATTTCCATTTTATCCATTCCTCCTCCT
CCTCTCGTGCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCTTGCTCCCAGGCCTC
CTGTGTGCGGAGTTCGCCGCCAACCACCTCGTGGAGACCCTCTTCGAGTC
CCGGGCCTGGCGCCGGGGGAGGGCGGGGGGGCGGGAGGAGGAGGAGGAGG
AGAAGGGGGAGGAGGGGGGATGGGTGCGGGAGGCACTGATTGAGACTTGC
CTCTCCCTCGATCGGAAACTGGCAGAGCTGCCGGACTTTCAGGTGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGAGGTGGTCGGACCAATAATTAAA
TACCCTTTTTATTCATCCTTCCCCCTCTCCCTTCCCTCCTCCCTTCATCC
CTCCCTCCCTCCCTCACCGCGCAGATGAAGGAGGAGCATACGATGGGGGT
GGGTAGCATGGCCCATAAGGTGCTTTCCTCGAAGCTGGTCTCGGCAGGTA
GGAAGGGAGGGTGGAAGGGAGGGAGGGAGAGAGGGCGGGAAGAGCGGAAA
GAGGCGATTGTCTTGTCTACTTGCCGCTGTCCTGGATCCTGTCATTTGGA
GCGCTCGTCCAGGCCCACTTCCATTGTTATCCCTTCCTCCCTCCCTCCTC
TAGACTCGAGTGGGAGCACGGCGGTCATCTGCCTAGTGACTCCCTCTCTA
GTCGCCTGCGCAAATCTGGGAGACAGCCGGGCGGTGCTGCTGGCCAGGAA
GGGAGGGAGGTACAGAGGGAGGGAGGGAGGGGAGGGAGGGAGGGAGGGAA
GGAGGGAGGGAGGGAGTCAGCATACGTGTTGGAAGAGCACCGACACCTAC
AGGGGAGACGCGCCTTCCTTCGCGTCCTCATCTCCCTCCCTCCCTCCCTC
TCTCCACCCCCCCCTCCCTCCCTCCCCCCCTTCCCCTCACGTTTTCATTT
ACCCAGCGACGACGACATTGACGATCCTTCCGCCCCTCTCTCCCTGCATG
CCCTGCCCCTCTCCTTCGACCACAAACCCGAGTTGGAGAGCGAGAAACAG
CGGGTGGAGGCCGCGGGAGGGTTAGTGAAGGGAATGAATGTGGCCCCGGA
CAAGGACAGTGCGCCCGTGTTGATTTGGCGGTAGGCAAGGAGGGAGAGAG
GGAGGGGAGGACGGAGGAAAGGAAGTTAGTGGAGGCAGCTTGTGCCGCAC
TCGTTTGCCTCCAGCGCTCATGTTTGTCACTTTCTCTCAACACCCCTCCC
TCCGTCCCTCCCTCCCTCCCTCCCTCAGCGTCTATCCCCGTGAAGGTACG
GCGGACTCTCTGGCTATGACCCGAGCCCTCGGCGATTTCGCCTACAAGCG
CAAGCTCGGCTTGGGGGTGGAGGAGCAGATGGTACGGAAAAGGAGGGGGG
GAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGCATGGGATCGAGGTGA
GGGTACGACACAGATTGACTTGTGTTGAATAAAATGTCAAGTCACAGAGC
CACGGCCTGCTTGCACCGGCTATTCTTCCGCTTTGACTCCCTTTCTTCCT
TTCTCTCTCCCTCCCTCCCTCCCTCAGATCATCCCCTTGCCTGACGTCCA
TCTGCACCCGCGCGGGCCTGCGGACGAATTCCTGGTGTTGGCCTGCGATG
GTGTCTGGGACGTGTTTTCCAACGATGAGATCGCTGTCTATGTGGAGAAT
CACGTGAATGCGACCAGAGACGGAGGACGGAAGGTAGGGGGAGGAAGGGG
GGGAAGGGAATGACGGGTGTGACTTCCCCATCACTCTCCTGGGTGTTCAA
TCAGTCCTCCCTCTCTCCCTCCCTCCCTTTCAGTCCACCTACCTGGCCGA
GCTCGCGGACGACATCGTGAAGGAAAGCATGCGCCGAGGCTCCCGAGACA
ACATTACGGCACTGGTGGTGCGTCTCCGCGCACCGGATGATGGGGAACGC
CGAACTTTGTTTATGTGACGAGAGAAGGGTGGTTGGGCAGGAGGGAG

Coding sequence (CDS) from alignment at chr8:85061..89907+

>NO08G00220.1 ID=NO08G00220.1|Name=NO08G00220.1|organism=Nannochloropsis oceanica|type=CDS|length=2562bp|location=Sequence derived from alignment at chr8:85061..89907+ (Nannochloropsis oceanica)
ATGCGCTTCAGATTCGGCGAGTGTTCTGTGTCGAGTGTTCTTGTCTTGGT
CGTAGCTCATGGACAATCACTACCCACCAACAACCCAGCCACAAGCCACC
GCAGGCAACCCCTTCTCCCCAAGAGCATCATGTTTAGCTCTCTTTTGAGC
GGCACTTTAGGCGAGATCCTGGCGCCTTCCCCTTCTGTATCCGCTGAGAA
GAAGGAACCATCATCAGAGCAGGAGCAGCAGGAGCAGCAGCAACAGGAAG
CAAGCGGTCAGGGTGCGCAAACCTACTCGATTCCACGGCAAGAAGAGGAC
GCAGCAGCGCGTGCAAGTGTGAACAAGACCCTCGCGGATGCCTCAACGCT
CTTTCCCTTTCCCGAGGTCGAGAAGAGAGCCGCCCCCTCTCCTTCGCCTA
CCGGTGTGACCCCTACTGCCGCCATGACAGACCCCGCGGCTACAGACGTG
ACGGGCATGCTCGCCAACCTGTCGCTCGCGGATGAGAAGAAAGAGCAAGA
GCAAGAGCAACAGACCGGTCGACAGAGCGCGGCAGCCGTCCTGATGCCTC
CCCCTCCCCCTCCGTCGATGTCCAACTCTTCCTCCCTGGCCTCTTTGCGC
CCCCCGCCGCCCACCCCAGGAGTCACTCCCCCCAGCTCTAAAATTGAGAA
TGAAGGAGAAGGTGATAGAGGTGATAGCATCAATAGCAACCTTCTTCCTG
CCTTCGCCACGCCTTCCAAGCAGACGCCGGGTACGGGCAGGAAGGGGTCT
GCGGCCCGTCGGCGCTATACGGTCAGTCCGATGCTCTCCCGCACACCCAA
AAAGATGGAGCCGAGGTTGGGAGACATGGTGCTGAAGGCGGCCGTCGACA
CCGCAGCGTGTCTGACGAGCCCCATCAGTGACTGGAAGAAGCAGAAGGCC
GTCTTTGATGCCTGTGCGCTTTCGCGGGCCACCCCCGAGCATAACAAGAT
ACAAGCCCTTGCTTCCTCCCTCGCCTCCGAGCCGTCTCTTGCCAAGGCCC
GTAGCACGCGTTTGGCGATGCTCGCTCCTGATGGACAGACACCCCTCCAC
TGTGCCGCGGCGATGAACAACATGACTGCGCTTAATTTATTGCTCCTAGC
GCCGGAGACAGACTGCTTTGCCGTGGACTTGCAGGGTCGGACAGCCCTCC
ACCTCGCCGCTACCAACGGTCACCTGGAAGCCTGCCGTCTTCTAAAGCAC
GAGATGACGCGTAGAGCCGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GCAGGCACCGGTAGGGATGGCGGCGCCGGTTGATCTGTCGGGAAGAACGC
CGTTGGGATGGAGGGTGTCAGCAGCAGGGGAAAAGAAGGAGCTGGAGGAG
GAGCTCTTTGCGTTGGGAGACCCGTCCATCTTCCCCACGGTGCCCCTGCA
GGCCCGGACGGGGGGTGAGAGACTCGGCTTCGGCTACTGCTCCACGCCGG
GTTGGCAGCCTAAGATGGAGGACACGGTTTGCGTGCAGACGCCTCTAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAATAGGAGAAGGGGAGGGCGGGAG
GGGGGACGGGGGGGACGAAGGAGTAGGGGAGGAGGACGGTCTTTTCGCTG
TGTTCGATGGACACCAAGGCCTCCTGTGTGCGGAGTTCGCCGCCAACCAC
CTCGTGGAGACCCTCTTCGAGTCCCGGGCCTGGCGCCGGGGGAGGGCGGG
GGGGCGGGAGGAGGAGGAGGAGGAGAAGGGGGAGGAGGGGGGATGGGTGC
GGGAGGCACTGATTGAGACTTGCCTCTCCCTCGATCGGAAACTGGCAGAG
CTGCCGGACTTTCAGATGAAGGAGGAGCATACGATGGGGGTGGGTAGCAT
GGCCCATAAGGTGCTTTCCTCGAAGCTGGTCTCGGCAGACTCGAGTGGGA
GCACGGCGGTCATCTGCCTAGTGACTCCCTCTCTAGTCGCCTGCGCAAAT
CTGGGAGACAGCCGGGCGGTGCTGCTGGCCAGGAAGGGAGGGAGCGACGA
CGACATTGACGATCCTTCCGCCCCTCTCTCCCTGCATGCCCTGCCCCTCT
CCTTCGACCACAAACCCGAGTTGGAGAGCGAGAAACAGCGGGTGGAGGCC
GCGGGAGGGTTAGTGAAGGGAATGAATGTGGCCCCGGACAAGGACAGTGC
GCCCGTGTTGATTTGGCGCGTCTATCCCCGTGAAGGTACGGCGGACTCTC
TGGCTATGACCCGAGCCCTCGGCGATTTCGCCTACAAGCGCAAGCTCGGC
TTGGGGGTGGAGGAGCAGATGATCATCCCCTTGCCTGACGTCCATCTGCA
CCCGCGCGGGCCTGCGGACGAATTCCTGGTGTTGGCCTGCGATGGTGTCT
GGGACGTGTTTTCCAACGATGAGATCGCTGTCTATGTGGAGAATCACGTG
AATGCGACCAGAGACGGAGGACGGAAGTCCACCTACCTGGCCGAGCTCGC
GGACGACATCGTGAAGGAAAGCATGCGCCGAGGCTCCCGAGACAACATTA
CGGCACTGGTGGTGCGTCTCCGCGCACCGGATGATGGGGAACGCCGAACT
TTGTTTATGTGA

Synonyms

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