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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:1094370..1097334 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G03930.1 vs.
Match: EWM26970.1 (tbc domain-containing protein kinase-like isoform 3, partial [Nannochloropsis gaditana]) HSP 1 Score: 336.3 bits (861), Expect = 2.800e-88 Identity = 160/211 (75.83%), Postives = 177/211 (83.89%), Query Frame = 0
Query: 1 MLGAQLRTEISKAHIDTPKVKAFCRKNPVGIVVDNKIRSRVWLTLLLAGEAPPPLPSVPPAARLQGEDARVVDADVRRTRGYLPIFQEPATQETVRMLLTTFCLANGVRYKQGMHELLAPFVALSPDPPLPPLPAEAIYAMFSRFISRYLGPFFRDEGTRVLQEGFSLFEMLLAYHDPELAQHLKKHDFPPALYLTPFLVTLFAHNLEMYL 212
ML AQLR EI+K +D PK+K FCR +PVG +VDNK+R +VWL LLL GE PPPLPS+PP A L EDARVVDADV+RTRGYLPIFQ P TQ+TVR LL T+CLA GV+YKQGMHELLAPFVALSPDPP PPLP EAIYAMF RF+SRYL PFF D GTR LQ GF+ FE+LL YHDPEL HL++HDFPPALYLTP LVTLFAHNLEMYL
Sbjct: 1 MLSAQLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEEDARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSPPLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYL 211
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G03930.1 ID=NO07G03930.1|Name=NO07G03930.1|organism=Nannochloropsis oceanica|type=mRNA|length=2538bp ATGCTAGGCGCCCAACTTCGCACCGAAATCAGCAAGGCACATATCGATAC ACCCAAGGTCAAGGCCTTCTGTCGGAAAAACCCTGTGGGTATCGTGGTGG ACAACAAAATAAGATCGAGAGTTTGGTTAACTCTCCTCCTCGCCGGCGAA GCTCCCCCTCCCTTGCCCTCCGTTCCCCCGGCCGCCCGCCTCCAAGGGGA AGATGCTCGCGTTGTGGATGCCGATGTGAGACGCACCCGCGGTTATCTTC CCATCTTCCAGGAACCCGCCACGCAAGAAACGGTTCGGATGCTTTTGACA ACGTTTTGCCTGGCCAATGGCGTGCGGTACAAGCAAGGGATGCATGAGCT TCTGGCCCCCTTCGTCGCGCTTAGCCCTGATCCGCCCTTACCTCCCCTGC CGGCTGAAGCGATCTATGCTATGTTTTCCCGGTTTATTTCGCGGTATCTA GGACCTTTCTTCAGGGATGAAGGCACCCGGGTGTTGCAAGAGGGGTTTTC ACTGTTCGAAATGCTGCTGGCGTACCATGACCCGGAGCTGGCGCAGCACC TGAAAAAACACGACTTCCCTCCTGCCCTTTATCTGACGCCGTTTCTCGTC ACCCTTTTTGCCCATAATCTCGAGATGTATCTCGCGGCCCCTGCTCCTTC CGCTGGACCTGGGAGGGAGGGAAGGAGGGAGGGAGGCGGGGGTGGAGGTA TTGGAGATGATAGGAGAAGTGAAGATTCGGTCACAGGAAGATATTGGGGA GCTGGTGCCCCTGGCGCTGGAGGCGAGTTGGCGGACCCCTCGAGGGATGT GCATGGACCTGAGGAGAACGACCCTGATGGGAAGGGGGGAGGGAGGGAGA GAGGAGGGGAGAGGATCGGAACGGAGGAGGAGGAGGAGGAGGAGAAGGAG GAAAAGGCAAGGGAGGAGGTGGAGGGGAAGAAGGAAGAGGAAGAGGGGGA GGAGGGGGGGAAGATATGGCATTTGGGGGAGGAGTGCTGGTGTGTGGAGA TGTCGAGCGCGGAGTTGGTGAAGGCGTTGGAGGCTCAGCAGGTAGCAGCA GCAGCAGCGGCGGCTGCGGAGAAAAGTAAAATGAGGAGATTTGCCAACAG TGCCAGCATCAGCAGCACCAGCATCAGCAGCGTGTCCTCCTCTTCTTCTC CGGGTTCTGTCGCTCAAAAAAAGACTGCAGCAATACCTGTCTCCTCCTCC TCCTCCTCCCCCTCCTCCTCCTCCTCCTCCACCTCTTCCTCTTACTCTTC CTCATTCCTTTCCTCCTGGTCAGGGGCCGCAAGCAAAGAAGCAGCAGACC TGTCATCTTCTCATTCTCATCCCTTCTCCACCACCTCCTCCACCTCCCCT TCGCTCCAAGGACAGATTCCCTCTATATTCCCTCCCACCCTCCCCCCCTC CCTCCCCCTCCTAGTCCTTGACGTCCGCACCCATGAAGACTACGTCCAAA GTGGGGCCGGTCGCCTGAAACACTCCCTCCGCCTCCCTCCCGACCTCGCC CTCCCTCCCTCCCTCCCCCTCCTCTCGGAATGGCTGGCCTCGCACCAAAT TCTGCCGGGGAAGCAAAGACTGTGTGTGATAGGCTCGCGGTTGAGGAAAA GGAAAAGGGGACGGGGAGGGGACAAGGCAGGGAAGGAGGGAGGGAGGGAA GAGCAGCAGGGTGTGTGGCAGAGGTTGTTCTTCGGAGAAGGTTACGGCTC AGAGGAAGACGAGGAAGAGAACGAACATGGCCTGCCCTCCCCCCCCCTCT ATCCTGCACCCCCCTCTTCCTCCCCCTCCATGAGGGATACAGGCGACGCC TTGATTCTGCGTCTACATTCGCTTTACTTCCCCTACGTGAGCAAGCTTGC AGGCTCCTTCTCCAATCTCCTGGATTTTCTCCTCCTTTCCCCCTCCCATG GCCCTACCTCCTTTACTCCCTCCATTGCCGCTCTCCGCTCCTCCTCAACC CTCATCGAGCACCACGACTCGCTGGTCTACGAACGCCACCGACGGAAGGA ATGGGCTTTGTCCTCCCTCCCTCCCACCCTCTACACCACCGCCGGTCTTC AACGTCCCGTCGTCTTTCCCTCCTCCTCTCCCTCCTCTGATGAAGAAGAC TGTTACTGGCCCCGGGGGATGGAGGGTCTGCCGTTACCGAGAGGGAGGAG ACTGAGGCCTGAGGAAATGCTCCGTTTGGCCGAGACGACGGAGATCGCAA AGAGTAAGGGGCACCGGACAGTGGTACATGCGATCAACGAAATGGTTTTC GTGCAGAAAAAGATGATTGAGAGGGGTATGGGGGGGGAGGGGGAGGAGGA GGAGCCGTTAGGCCTATTGCTATCTCGGATTAGTGATGGTAATACGATTG CCGGTGGAAAAAGAGAAAGGAAAGAAGGTGGAGATGTAGAAGGAGGTGGA GGGAAAGAAGAAGGAGATAAAGGAGGAGGAGTCGCGGTGACCAGAGCTGT GCTGGACAAGGCCGCGCATCTGTTGAACCGGGCTGATAGCCTTTTTGGTC GGGTGGTGGTTAAGAATGTTGGGGGGGCACAATCGTGA back to topprotein sequence of NO07G03930.1 >NO07G03930.1-protein ID=NO07G03930.1-protein|Name=NO07G03930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=846bp MLGAQLRTEISKAHIDTPKVKAFCRKNPVGIVVDNKIRSRVWLTLLLAGE APPPLPSVPPAARLQGEDARVVDADVRRTRGYLPIFQEPATQETVRMLLT TFCLANGVRYKQGMHELLAPFVALSPDPPLPPLPAEAIYAMFSRFISRYL GPFFRDEGTRVLQEGFSLFEMLLAYHDPELAQHLKKHDFPPALYLTPFLV TLFAHNLEMYLAAPAPSAGPGREGRREGGGGGGIGDDRRSEDSVTGRYWG AGAPGAGGELADPSRDVHGPEENDPDGKGGGRERGGERIGTEEEEEEEKE EKAREEVEGKKEEEEGEEGGKIWHLGEECWCVEMSSAELVKALEAQQVAA AAAAAAEKSKMRRFANSASISSTSISSVSSSSSPGSVAQKKTAAIPVSSS SSSPSSSSSSTSSSYSSSFLSSWSGAASKEAADLSSSHSHPFSTTSSTSP SLQGQIPSIFPPTLPPSLPLLVLDVRTHEDYVQSGAGRLKHSLRLPPDLA LPPSLPLLSEWLASHQILPGKQRLCVIGSRLRKRKRGRGGDKAGKEGGRE EQQGVWQRLFFGEGYGSEEDEEENEHGLPSPPLYPAPPSSSPSMRDTGDA LILRLHSLYFPYVSKLAGSFSNLLDFLLLSPSHGPTSFTPSIAALRSSST LIEHHDSLVYERHRRKEWALSSLPPTLYTTAGLQRPVVFPSSSPSSDEED CYWPRGMEGLPLPRGRRLRPEEMLRLAETTEIAKSKGHRTVVHAINEMVF VQKKMIERGMGGEGEEEEPLGLLLSRISDGNTIAGGKRERKEGGDVEGGG GKEEGDKGGGVAVTRAVLDKAAHLLNRADSLFGRVVVKNVGGAQS* back to topmRNA from alignment at chr7:1094370..1097334+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G03930.1 ID=NO07G03930.1|Name=NO07G03930.1|organism=Nannochloropsis oceanica|type=mRNA|length=2965bp|location=Sequence derived from alignment at chr7:1094370..1097334+ (Nannochloropsis oceanica) ATGCTAGGCGCCCAACTTCGCACCGAAATCAGCAAGGCACATATCGATAC
ACCCAAGGTCAAGGCCTTCTGTCGGAAAAACCCTGTGGGTATCGTGGTGG
ACAACAAAATAAGATCGAGAGTTTGGTTAACTCTCCTCCTCGCCGGCGAA
GCTCCCCCTCCCTTGCCCTCCGTTCCCCCGGCCGCCCGCCTCCAAGGGGA
AGATGCTCGCGTTGTGGATGCCGATGTGAGACGCACCCGCGGTTATCTTC
CCATCTTCCAGGAACCCGCCACGCAAGAAACGGTTCGGATGCTTTTGACA
ACGTTTTGCCTGGCCAATGGCGTGCGGTACAAGCAAGGGATGCATGAGCT
TCTGGCCCCCTTCGTCGCGCTTAGCCCTGATCCGCCCTTACCTCCCCTGC
CGGCTGAAGCGATCTATGCTATGTTTTCCCGGTTTATTTCGCGGTATCTA
GGACCTTTCTTCAGGGTAAGTCGGGATGCTTGTGGTGATAGATCATCAGT
CAGGGAGGGAGAGGGAGGGAGGGAGGGAGGGATGGGGGGGTTGCAAAGGT
GCGTTATTGCTATAGAGGCGGTGCTAATGCAAGAATTCTCACGAAATGCA
AAGTGGCTCAAGTTCTCCTCCTTTTTGCATGGCGGATTTTCCTCTCAGGA
TGAAGGCACCCGGGTGTTGCAAGAGGGGTTTTCACTGTTCGAAATGCTGC
TGGCGTACCATGACCCGGAGCTGGCGCAGCACCTGAAAAAACACGACTTC
CCTCCTGCCCTTTATCTGACGCCGTTTCTCGTCACCCTTTTTGGTAGGTT
TGCGAAGGAGATGGGGAAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCG
GGAGGGGCCGAGGAAGTTGTTTACAGGCAGCCATCACGAAAGAGACTGTT
TCATACCTACTAAAAGGCTCTTTCCAACCCTTTCCCTTCTTCCCTCCTCT
TCAGCCCATAATCTCGAGATGTATCTCGTACATCGTTTGTGGGACAGCTA
TTTCTCTCTCGATGACCCTACCCTGGTTTATTTCCTCGTCCTCGCCCTCC
TCCGTCTCAGGCGGCCCCTGCTCCTTCCGCTGGACCTGGGAGGGAGGGAA
GGAGGGAGGGAGGCGGGGGTGGAGGTATTGGAGATGATAGGAGAAGTGAA
GATTCGGTCACAGGAAGATATTGGGGAGCTGGTGCCCCTGGCGCTGGAGG
CGAGTTGGCGGACCCCTCGAGGGATGTGCATGGACCTGAGGAGAACGACC
CTGATGGGAAGGGGGGAGGGAGGGAGAGAGGAGGGGAGAGGATCGGAACG
GAGGAGGAGGAGGAGGAGGAGAAGGAGGAAAAGGCAAGGGAGGAGGTGGA
GGGGAAGAAGGAAGAGGAAGAGGGGGAGGAGGGGGGGAAGATATGGCATT
TGGGGGAGGAGTGCTGGTGTGTGGAGATGTCGAGCGCGGAGTTGGTGAAG
GCGTTGGAGGCTCAGCAGGTAGCAGCAGCAGCAGCGGCGGCTGCGGAGAA
AAGTAAAATGAGGAGATTTGCCAACAGTGCCAGCATCAGCAGCACCAGCA
TCAGCAGCGTGTCCTCCTCTTCTTCTCCGGGTTCTGTCGCTCAAAAAAAG
ACTGCAGCAATACCTGTCTCCTCCTCCTCCTCCTCCCCCTCCTCCTCCTC
CTCCTCCACCTCTTCCTCTTACTCTTCCTCATTCCTTTCCTCCTGGTCAG
GGGCCGCAAGCAAAGAAGCAGCAGACCTGTCATCTTCTCATTCTCATCCC
TTCTCCACCACCTCCTCCACCTCCCCTTCGCTCCAAGGACAGATTCCCTC
TATATTCCCTCCCACCCTCCCCCCCTCCCTCCCCCTCCTAGTCCTTGACG
TCCGCACCCATGAAGACTACGTCCAAAGTGGGGCCGGTCGCCTGAAACAC
TCCCTCCGCCTCCCTCCCGACCTCGCCCTCCCTCCCTCCCTCCCCCTCCT
CTCGGAATGGCTGGCCTCGCACCAAATTCTGCCGGGGAAGCAAAGACTGT
GTGTGATAGGCTCGCGGTTGAGGAAAAGGAAAAGGGGACGGGGAGGGGAC
AAGGCAGGGAAGGAGGGAGGGAGGGAAGAGCAGCAGGGTGTGTGGCAGAG
GTTGTTCTTCGGAGAAGGTTACGGCTCAGAGGAAGACGAGGAAGAGAACG
AACATGGCCTGCCCTCCCCCCCCCTCTATCCTGCACCCCCCTCTTCCTCC
CCCTCCATGAGGGATACAGGCGACGCCTTGATTCTGCGTCTACATTCGCT
TTACTTCCCCTACGTGAGCAAGCTTGCAGGCTCCTTCTCCAATCTCCTGG
ATTTTCTCCTCCTTTCCCCCTCCCATGGCCCTACCTCCTTTACTCCCTCC
ATTGCCGCTCTCCGCTCCTCCTCAACCCTCATCGAGCACCACGACTCGCT
GGTCTACGAACGCCACCGACGGAAGGAATGGGCTTTGTCCTCCCTCCCTC
CCACCCTCTACACCACCGCCGGTCTTCAACGTCCCGTCGTCTTTCCCTCC
TCCTCTCCCTCCTCTGATGAAGAAGACTGTTACTGGCCCCGGGGGATGGA
GGGTCTGCCGTTACCGAGAGGGAGGAGACTGAGGCCTGAGGAAATGCTCC
GTTTGGCCGAGACGACGGAGATCGCAAAGAGTAAGGGGCACCGGACAGTG
GTACATGCGATCAACGAAATGGTTTTCGTGCAGAAAAAGATGATTGAGAG
GGGTATGGGGGGGGAGGGGGAGGAGGAGGAGCCGTTAGGCCTATTGCTAT
CTCGGATTAGTGATGGTAATACGATTGCCGGTGGAAAAAGAGAAAGGAAA
GAAGGTGGAGATGTAGAAGGAGGTGGAGGGAAAGAAGAAGGAGATAAAGG
AGGAGGAGTCGCGGTGACCAGAGCTGTGCTGGACAAGGCCGCGCATCTGT
TGAACCGGGCTGATAGCCTTTTTGGTCGGGTGGTGGTTAAGAATGTTGGG
GGGGCACAATCGTGA back to topCoding sequence (CDS) from alignment at chr7:1094370..1097334+ >NO07G03930.1 ID=NO07G03930.1|Name=NO07G03930.1|organism=Nannochloropsis oceanica|type=CDS|length=2538bp|location=Sequence derived from alignment at chr7:1094370..1097334+ (Nannochloropsis oceanica) ATGCTAGGCGCCCAACTTCGCACCGAAATCAGCAAGGCACATATCGATAC ACCCAAGGTCAAGGCCTTCTGTCGGAAAAACCCTGTGGGTATCGTGGTGG ACAACAAAATAAGATCGAGAGTTTGGTTAACTCTCCTCCTCGCCGGCGAA GCTCCCCCTCCCTTGCCCTCCGTTCCCCCGGCCGCCCGCCTCCAAGGGGA AGATGCTCGCGTTGTGGATGCCGATGTGAGACGCACCCGCGGTTATCTTC CCATCTTCCAGGAACCCGCCACGCAAGAAACGGTTCGGATGCTTTTGACA ACGTTTTGCCTGGCCAATGGCGTGCGGTACAAGCAAGGGATGCATGAGCT TCTGGCCCCCTTCGTCGCGCTTAGCCCTGATCCGCCCTTACCTCCCCTGC CGGCTGAAGCGATCTATGCTATGTTTTCCCGGTTTATTTCGCGGTATCTA GGACCTTTCTTCAGGGATGAAGGCACCCGGGTGTTGCAAGAGGGGTTTTC ACTGTTCGAAATGCTGCTGGCGTACCATGACCCGGAGCTGGCGCAGCACC TGAAAAAACACGACTTCCCTCCTGCCCTTTATCTGACGCCGTTTCTCGTC ACCCTTTTTGCCCATAATCTCGAGATGTATCTCGCGGCCCCTGCTCCTTC CGCTGGACCTGGGAGGGAGGGAAGGAGGGAGGGAGGCGGGGGTGGAGGTA TTGGAGATGATAGGAGAAGTGAAGATTCGGTCACAGGAAGATATTGGGGA GCTGGTGCCCCTGGCGCTGGAGGCGAGTTGGCGGACCCCTCGAGGGATGT GCATGGACCTGAGGAGAACGACCCTGATGGGAAGGGGGGAGGGAGGGAGA GAGGAGGGGAGAGGATCGGAACGGAGGAGGAGGAGGAGGAGGAGAAGGAG GAAAAGGCAAGGGAGGAGGTGGAGGGGAAGAAGGAAGAGGAAGAGGGGGA GGAGGGGGGGAAGATATGGCATTTGGGGGAGGAGTGCTGGTGTGTGGAGA TGTCGAGCGCGGAGTTGGTGAAGGCGTTGGAGGCTCAGCAGGTAGCAGCA GCAGCAGCGGCGGCTGCGGAGAAAAGTAAAATGAGGAGATTTGCCAACAG TGCCAGCATCAGCAGCACCAGCATCAGCAGCGTGTCCTCCTCTTCTTCTC CGGGTTCTGTCGCTCAAAAAAAGACTGCAGCAATACCTGTCTCCTCCTCC TCCTCCTCCCCCTCCTCCTCCTCCTCCTCCACCTCTTCCTCTTACTCTTC CTCATTCCTTTCCTCCTGGTCAGGGGCCGCAAGCAAAGAAGCAGCAGACC TGTCATCTTCTCATTCTCATCCCTTCTCCACCACCTCCTCCACCTCCCCT TCGCTCCAAGGACAGATTCCCTCTATATTCCCTCCCACCCTCCCCCCCTC CCTCCCCCTCCTAGTCCTTGACGTCCGCACCCATGAAGACTACGTCCAAA GTGGGGCCGGTCGCCTGAAACACTCCCTCCGCCTCCCTCCCGACCTCGCC CTCCCTCCCTCCCTCCCCCTCCTCTCGGAATGGCTGGCCTCGCACCAAAT TCTGCCGGGGAAGCAAAGACTGTGTGTGATAGGCTCGCGGTTGAGGAAAA GGAAAAGGGGACGGGGAGGGGACAAGGCAGGGAAGGAGGGAGGGAGGGAA GAGCAGCAGGGTGTGTGGCAGAGGTTGTTCTTCGGAGAAGGTTACGGCTC AGAGGAAGACGAGGAAGAGAACGAACATGGCCTGCCCTCCCCCCCCCTCT ATCCTGCACCCCCCTCTTCCTCCCCCTCCATGAGGGATACAGGCGACGCC TTGATTCTGCGTCTACATTCGCTTTACTTCCCCTACGTGAGCAAGCTTGC AGGCTCCTTCTCCAATCTCCTGGATTTTCTCCTCCTTTCCCCCTCCCATG GCCCTACCTCCTTTACTCCCTCCATTGCCGCTCTCCGCTCCTCCTCAACC CTCATCGAGCACCACGACTCGCTGGTCTACGAACGCCACCGACGGAAGGA ATGGGCTTTGTCCTCCCTCCCTCCCACCCTCTACACCACCGCCGGTCTTC AACGTCCCGTCGTCTTTCCCTCCTCCTCTCCCTCCTCTGATGAAGAAGAC TGTTACTGGCCCCGGGGGATGGAGGGTCTGCCGTTACCGAGAGGGAGGAG ACTGAGGCCTGAGGAAATGCTCCGTTTGGCCGAGACGACGGAGATCGCAA AGAGTAAGGGGCACCGGACAGTGGTACATGCGATCAACGAAATGGTTTTC GTGCAGAAAAAGATGATTGAGAGGGGTATGGGGGGGGAGGGGGAGGAGGA GGAGCCGTTAGGCCTATTGCTATCTCGGATTAGTGATGGTAATACGATTG CCGGTGGAAAAAGAGAAAGGAAAGAAGGTGGAGATGTAGAAGGAGGTGGA GGGAAAGAAGAAGGAGATAAAGGAGGAGGAGTCGCGGTGACCAGAGCTGT GCTGGACAAGGCCGCGCATCTGTTGAACCGGGCTGATAGCCTTTTTGGTC GGGTGGTGGTTAAGAATGTTGGGGGGGCACAATCGTGA back to top
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