NO07G00310.1, NO07G00310.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G00310.1
Unique Name	NO07G00310.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3082
Alignment location	chr7:122823..129840 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:122823..129840 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO07G00310.1 vs.
Match: XP_002610565.1 (hypothetical protein BRAFLDRAFT_117849 [Branchiostoma floridae]; EEN66575.1 hypothetical protein BRAFLDRAFT_117849 [Branchiostoma floridae])

HSP 1 Score: 379.0 bits (972), Expect = 4.400e-101
Identity = 248/742 (33.42%), Postives = 357/742 (48.11%), Query Frame = 0

Query:   88 GLVLHAMSEERQGWDRLGEFVAWSLEWQVEEKHETIPVFFQTNIRVYVSSPLLYLIAFEQVFPQGTEGSASLYADEVISSFPAFATGPDSEWEEYGFLTYAHNM----ACAEGVLFCTPVGRMGGRKEDIALLSDSTGQTREGGKEGRRKGQPPLVILSPLDNFMAMNVFFENRSQ-----VLQYGVQGKVNSLPPGFSSTTLLSLHLHSSPTLAVEEWGGVLRSYYGTRKEGGREGGREEVTKDYLSYYTDNGAYYYYLTEENKTYEETLLDLISYSQAQSISYSSLQIDSWWYFKGRDNGTSTWEAKPDVFPSGLEGFQSELQLPLIAHNRWWSVETPYACQNGGNYSFVVERRQPLPPSLPPPLGAGGTDRYDAPSSPPRQRRRLFGDDVVPLSYGAALPLQESFWTDLFRQGKTWGLRVYEQDWLHNTFLSLNHTLATHDGARTWLMQMGRAAEKEGIIIQYCMAFPRFYLQTLELPAVKQIRVSDDYGPSSRPDQWSCGDTSLLAHALGLVPFKDVFWSSAVQEGNPYDPSTREGKPNLEAAIATLSTGPVSAGDKKEAEDKELLLRSCDQEGKILKPSRPLTTLDAVWKRRAFGAEVVEGGPDGLVMATHATLPLDLWKIGKRGGAEDTAMELEVEELHFDIFLAAALDAPFPLHPSNLPPNRHPCNSWECGKEEGEGRRRVAFVSPYSGNGSYADFVERGTIALQPFD-ETHPILLPSCDRHDFALYYTAPLLPL 820
            G +L+       G D LG++   S+ WQ         V  +T  R Y+ +P    + F Q FP G  G++    ++  + FP  A   + +     +L++  NM    +   G  +    G   G       + D T  T               V+LSP   FMA +V+            + YG+ G V ++PP F   T+L          A+ EWGG L   YG      R     +   +Y+ Y+TDNGAYYYY TE  K YE+T++D+++Y++   I Y  LQ+DSWWY+KG   G  TW+A+PDVFPSGL     ++ LP++AHNR+W+ +T YA QNGGNYSF+VE++     S+P  +                    +F DD+   S    L                    +YEQDWL   F  L  TL++    + WLMQ G+AA    + IQYCMA PR  LQ++++PAV Q RVS DY P +  +QW  G  S++AHALG+ PFKD FWS++ Q G+PY  +T E  P L+AA++TLS GPV   D  +  D +L++RSC+ EG +LKPSRP T +D    ++AF  ++   GP G V  T++                      ++    F I LAA L A + +            NS   G   GE    +AF  P              T ++ PF   +  +LL  C + DFA++YT+P L L
Sbjct:   97 GSLLYTTFASGLGTDPLGKYQYKSIHWQAGG------VRVETYYRYYMDAPA---VVFGQHFPDGANGTSIGNEEQTCTGFPTIAL--EGQAGLLAYLSFGGNMFGGASIGAGEWYYQTTGIRSGITGGPLAIFDRTLHT---------------VVLSPFSQFMAASVWHNGTGGGTFGGEVNYGIMGNVENIPPNFDYQTIL--FYDKGINQALHEWGGTLMRQYGKT----RARTESDFASNYIGYWTDNGAYYYYHTESGKNYEDTMVDVMAYTKEAGIPYRYLQLDSWWYYKGVAGGVKTWDARPDVFPSGLRALYEKIGLPIVAHNRYWARDTTYAKQNGGNYSFIVEKQS--TTSMPIDM--------------------MFWDDLFTQSAEWGLI-------------------IYEQDWLDVEFKGLKATLSSTSLGKQWLMQFGQAASSHDLNIQYCMANPRHALQSVQIPAVTQARVSSDYHPGN--EQWRIGIGSIMAHALGVRPFKDTFWSTSNQTGSPYGHAT-EPYPRLQAAVSTLSAGPVGPSDMVKGADVKLIMRSCNAEGLLLKPSRPATAIDLQIAQKAFQLDL---GPKGEVWTTYS----------------------DISGFRFGIILAADLQADWNI------------NSVTAG--FGEMMPGMAFTWPL-------------TPSMTPFGLASENLLLKQCGKDDFAVWYTSPFLDL 710

The following BLAST results are available for this feature:

BLAST of NO07G00310.1 vs.

BLAST of NO07G00310.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_002610565.1	4.400e-101	33.42	hypothetical protein BRAFLDRAFT_117849 [Branchiost...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO07G00310	NO07G00310	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO07G00310.1	NO07G00310.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO07G00310.1.cds1	NO07G00310.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds2	NO07G00310.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds3	NO07G00310.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds4	NO07G00310.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds5	NO07G00310.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds6	NO07G00310.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds7	NO07G00310.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds8	NO07G00310.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds9	NO07G00310.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds10	NO07G00310.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds11	NO07G00310.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds12	NO07G00310.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds13	NO07G00310.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds14	NO07G00310.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds15	NO07G00310.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds16	NO07G00310.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds17	NO07G00310.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds18	NO07G00310.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds19	NO07G00310.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00310.1.cds20	NO07G00310.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr7:122823..129840+
coding sequence from alignment at chr7:122823..129840+

mRNA sequence

>NO07G00310.1 ID=NO07G00310.1|Name=NO07G00310.1|organism=Nannochloropsis oceanica|type=mRNA|length=3082bp
ATGCGTCCCCCGCCCCGACACTTCCTCCTCCTTCTTCTTCTCCCGCTTTT
CGCCGCTGCCTCCCCCTTCTCCCTGACTCTCGGCCCCTCCAACCTCTCGC
TCTCCCTCTCCCTGACCCCGTCATCCGTGGACTCGTCCTCCTTCCCGCCC
TCCTTAAATGCCTCCATCACCCTACCTTTGAGCCACATCGGCTTTAAGTA
CCACGGTCGCTTCCTTTGCCCTCCACATGTGGACGCCGGGACGGGTGGTG
TCGTCCAAGGCGGGCTCGTCCTGCATGCTATGTCGGAAGAGCGGCAAGGG
TGGGACAGGCTGGGAGAATTCGTGGCTTGGAGCCTGGAATGGCAAGTTGA
AGAAAAGCACGAGACAATCCCTGTCTTCTTCCAGACCAACATCCGCGTGT
ACGTCTCCTCGCCCCTCCTCTATCTGATAGCCTTCGAGCAGGTCTTCCCC
CAGGGCACAGAGGGGTCGGCTTCACTCTATGCAGACGAGGTCATCTCCTC
CTTCCCTGCCTTCGCCACCGGACCGGACAGCGAGTGGGAAGAGTATGGCT
TTCTTACCTACGCTCACAATATGGCGTGTGCGGAAGGTGTTCTTTTCTGT
ACTCCTGTTGGTCGAATGGGTGGACGGAAGGAGGACATAGCGCTCTTGTC
GGATTCGACGGGGCAGACGAGGGAAGGAGGGAAGGAGGGACGGAGGAAGG
GACAGCCCCCGCTGGTGATACTTTCTCCCCTGGACAATTTTATGGCCATG
AATGTGTTCTTTGAGAATAGAAGCCAGGTGCTGCAGTACGGAGTGCAGGG
AAAGGTAAATTCCCTTCCTCCCGGCTTCAGCAGCACCACCCTCCTCTCCC
TCCATCTGCACTCGAGCCCGACCCTGGCCGTAGAGGAGTGGGGCGGTGTT
CTACGGTCGTACTACGGGACAAGGAAAGAGGGCGGGAGGGAGGGCGGAAG
GGAGGAAGTGACGAAGGATTATTTGAGCTACTACACCGACAACGGCGCCT
ATTACTACTACCTGACTGAAGAGAACAAGACCTACGAGGAGACTCTCTTG
GACCTTATCTCCTACTCTCAAGCCCAGAGCATCTCTTACAGCTCCCTGCA
GATCGACTCCTGGTGGTACTTCAAGGGCAGGGACAATGGGACCTCGACCT
GGGAGGCGAAGCCGGACGTGTTTCCCTCCGGACTCGAGGGCTTTCAGAGC
GAGCTCCAGCTTCCTCTGATCGCCCACAACAGGTGGTGGTCCGTCGAGAC
GCCCTATGCCTGCCAGAACGGTGGGAACTACTCTTTTGTGGTGGAGCGGC
GTCAACCCCTTCCTCCGTCCCTCCCTCCTCCCTTGGGGGCAGGGGGGACA
GATAGATACGATGCTCCCTCCTCCCCCCCTCGTCAGCGGCGGCGTCTTTT
CGGCGATGATGTTGTCCCTCTCTCTTACGGTGCTGCCCTCCCACTCCAAG
AGAGCTTCTGGACCGATCTTTTCCGACAGGGGAAGACGTGGGGTCTGCGC
GTGTACGAACAGGACTGGCTCCACAATACCTTCCTCTCCCTGAACCACAC
TCTTGCCACCCACGACGGGGCGCGCACCTGGCTCATGCAGATGGGCCGAG
CCGCAGAGAAGGAGGGAATTATCATTCAGTACTGTATGGCCTTTCCCCGC
TTCTACTTGCAGACCCTCGAGCTCCCTGCCGTCAAGCAAATCCGCGTCTC
GGATGATTATGGGCCCTCCAGTCGCCCGGATCAGTGGTCGTGTGGGGATA
CGTCTCTGCTTGCTCATGCCCTGGGTTTGGTGCCCTTCAAGGACGTGTTC
TGGTCGTCGGCCGTGCAGGAAGGCAATCCCTACGACCCGTCCACGCGCGA
AGGGAAGCCTAATTTGGAGGCGGCCATCGCCACCCTTTCCACAGGCCCTG
TGTCCGCGGGGGACAAGAAGGAAGCTGAGGACAAGGAGCTGTTGCTTCGG
TCGTGTGATCAAGAAGGGAAGATCCTTAAGCCGTCCCGCCCCCTCACCAC
CCTCGATGCTGTGTGGAAGAGGAGGGCGTTCGGCGCAGAGGTGGTGGAGG
GAGGGCCGGACGGGCTCGTGATGGCGACCCATGCCACCCTCCCCCTCGAC
CTGTGGAAGATAGGGAAACGGGGAGGAGCAGAAGATACAGCGATGGAACT
GGAGGTGGAGGAGTTGCACTTTGATATCTTTCTAGCTGCCGCCTTGGACG
CCCCATTCCCCCTGCACCCGTCCAACCTCCCTCCAAACCGCCATCCCTGC
AATTCCTGGGAATGTGGGAAGGAGGAGGGAGAGGGGAGGAGGAGGGTGGC
TTTTGTGTCGCCCTATTCAGGGAATGGTTCATACGCTGATTTTGTCGAGA
GAGGGACGATTGCCTTGCAGCCCTTCGACGAGACTCACCCCATCCTCCTG
CCTTCCTGCGACCGCCACGACTTTGCCCTCTACTACACTGCGCCGCTTCT
CCCTCTCTGGTTGTCACCCTCATCCTCGTCCTCGTCCGACCCCTCATTTT
ATCTAGAGGACAAAGCAGGAGCAGAAGCGATTATTCGCCGTCTCCGCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCCATGTTGTACACCTCC
TCTTCCTCGGTGAGCTCAACAAATGGAGCCCCTTCGCCCCTCAGCGCTTC
TCTTCCTTGGCCTTTCTCCCCACCCACCGCTCCCTCCTCCTCGCCGTTCA
GGGCGGGAGAGAGGAAGTTGTGGAGGTTTCCTTCGCAGTGTTAGAAGACG
GAAGAGGGCATGGAGGGAGCGAGGGAGAGGTGGAGGTGATTCGTGTGAGA
GTGACGATGGATTGGCATGGAGAGGCGAGGCTGCGGGTGCAGGTGGAGGA
GAAGGGCGGGGGCCAGGGGGAAAGGAAGAGGAGGATAATTGTAGCGACAC
AGGAGTAGAAAAGCGAGAAGGGAAAAGATATGGAGAAGTGCCCGTTGGAA
TTTATCAGTTAATATCTTACACATATATGAATATACTCGCACTTGTGTGT
GTGTGTCCGTGTGTGTGTGTGTGTGTGTGTGT

protein sequence of NO07G00310.1

>NO07G00310.1-protein ID=NO07G00310.1-protein|Name=NO07G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=986bp
MRPPPRHFLLLLLLPLFAAASPFSLTLGPSNLSLSLSLTPSSVDSSSFPP
SLNASITLPLSHIGFKYHGRFLCPPHVDAGTGGVVQGGLVLHAMSEERQG
WDRLGEFVAWSLEWQVEEKHETIPVFFQTNIRVYVSSPLLYLIAFEQVFP
QGTEGSASLYADEVISSFPAFATGPDSEWEEYGFLTYAHNMACAEGVLFC
TPVGRMGGRKEDIALLSDSTGQTREGGKEGRRKGQPPLVILSPLDNFMAM
NVFFENRSQVLQYGVQGKVNSLPPGFSSTTLLSLHLHSSPTLAVEEWGGV
LRSYYGTRKEGGREGGREEVTKDYLSYYTDNGAYYYYLTEENKTYEETLL
DLISYSQAQSISYSSLQIDSWWYFKGRDNGTSTWEAKPDVFPSGLEGFQS
ELQLPLIAHNRWWSVETPYACQNGGNYSFVVERRQPLPPSLPPPLGAGGT
DRYDAPSSPPRQRRRLFGDDVVPLSYGAALPLQESFWTDLFRQGKTWGLR
VYEQDWLHNTFLSLNHTLATHDGARTWLMQMGRAAEKEGIIIQYCMAFPR
FYLQTLELPAVKQIRVSDDYGPSSRPDQWSCGDTSLLAHALGLVPFKDVF
WSSAVQEGNPYDPSTREGKPNLEAAIATLSTGPVSAGDKKEAEDKELLLR
SCDQEGKILKPSRPLTTLDAVWKRRAFGAEVVEGGPDGLVMATHATLPLD
LWKIGKRGGAEDTAMELEVEELHFDIFLAAALDAPFPLHPSNLPPNRHPC
NSWECGKEEGEGRRRVAFVSPYSGNGSYADFVERGTIALQPFDETHPILL
PSCDRHDFALYYTAPLLPLWLSPSSSSSSDPSFYLEDKAGAEAIIRRLRS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSHVVHLLFLGELNKWSPFAPQRF
SSLAFLPTHRSLLLAVQGGREEVVEVSFAVLEDGRGHGGSEGEVEVIRVR
VTMDWHGEARLRVQVEEKGGGQGERKRRIIVATQE*

mRNA from alignment at chr7:122823..129840+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO07G00310.1 ID=NO07G00310.1|Name=NO07G00310.1|organism=Nannochloropsis oceanica|type=mRNA|length=7018bp|location=Sequence derived from alignment at chr7:122823..129840+ (Nannochloropsis oceanica)
ATGCGTCCCCCGCCCCGACACTTCCTCCTCCTTCTTCTTCTCCCGCTTTT
CGCCGCTGCCTCCCCCTTCTCCCTGACTCTCGGCCCCTCCAACCTCTCGC
TCTCCCTCTCCCTGACCCCGTCATCCGTGGACTCGTCCTCCTTCCCGCCC
TCCTTAAATGCCTCCATCACCCTACCTTTGAGCCACATCGGCTTTAAGTA
CCACGGTCGCTTCCTTTGCCCTCCACATGTGGACGCCGGGACGGGTGGTG
TCGTCCAAGGCGGGTACGCAGGGAGGGGAGAAGGGAGGGACCGGAGAGGG
CCGCTAGAAGTGGGGGTATGGCTGCGACGGACACTCCTCATGCACACCCT
TCATCGTTCATCATGCAGACACGCATAGAAAATACCACAAGCTGTAGAAG
CAGCGCAGGCCCATAAGCCCCACTCACCTCTTCTCCCTTCCTCCTTTTCC
CCTTCCCCCCTCAGGCTCGTCCTGCATGCTATGTCGGAAGAGCGGCAAGG
GTGGGACAGGCTGGGAGAATTCGTGGCTTGGAGCCTGGAATGGCAAGTTG
AAGAAAAGCACGAGGTAGGTAGGTATAGTGATTGATCTGGAAGGAAATAG
GGAGGGTCCGGTGGGGAATGGTTCTAGACAAGGAGGGAGGATGGGAGGGA
GGAAATGAGAGATGAAGGGAGGACCAAAGCTCCACTTACATTTCTATCCC
ATCACTGATTCCCTCCCTCCCTCCCTCTCTTCCTCCCTCCCTACCTTCTT
CTCTTTCTTATCTCACACACAGACAATCCCTGTCTTCTTCCAGACCAACA
TCCGCGTGTACGTCTCCTCGCCCCTCCTCTATCTGATAGCCTTCGAGCAG
GTCTTCCCCCAGGGCACAGAGGGGTCGGCTTCACTCTATGCAGACGAGGT
GAGCCGCACCTCTTCCTTTTCCCCCCTCCTTCCCTCTCTTGTTGTATTCC
CGCCAAGTCTCGAGAAGGGTCGAGGAAATAGCTACCAACCTTACCCTTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCAGGTCATCTCCTCCTTCCCTGCC
TTCGCCACCGGACCGGACAGCGAGTGGGAAGAGTATGGCTTTCTTACCTA
CGCTCACAATATGTAAGGAGGGAGGGAGGGAGGGAAGAAGGGAGGGAAGG
AAGGAGGGAGGGAAGGACGATCTCTTTCGGAGACACACGAATCATTCACT
CATGCTCTCCCTCCTCCACCCCTCCTTTTATCCTTCTCTCCCTCCCTCCA
CCTGTGTTTCCGAAGGGCGTGTGCGGAAGGTGTTCTTTTCTGTACTCCTG
TTGGTCGAATGGGTGGACGGAAGGAGGACATAGCGCTCTTGTCGGATTCG
ACGGGGCAGGTATGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GCGTCGTTCTTAGTGATGTAATCAATGAATCAGTCAATCACTCACCAAGC
AACCTCACAAAAAAAGCAAGGAGGTGTCCCCCTCGTCCTCTTTCCTCCCC
CTTCTCCTCCTCCCCCTCCCCCCCTCCCCTTCCATCCACCTCTCACCAGA
CGAGGGAAGGAGGGAAGGAGGGACGGAGGAAGGGACAGCCCCCGCTGGTG
ATACTTTCTCCCCTGGACAATTTTATGGCCATGAATGTGTTCTTTGAGAA
TAGAAGCCAGGTGCTGCAGTACGGAGTGCAGGGAAAGGTAGGGACGAGGG
GGGAAGGAGGGAGGGAGGGAAGGAGGTGCTGCAGTGCGGAGAGCAGGGAA
AGGTAGGGACGAGGGGGGAAGAAGGGAGGAGGAGAAAGAGGTGCTGCAGT
GCGGAGAGCAGGGAAAGGTAGGGACGAGGGGGGAAGGAGGGAGGAGGAGA
AAGAGGTGCTGCAGTGCGGAGAGCAGGGAAAGGTAGGGAGGGGGGGGGGG
GGAGGAGGGAAGGAGAGAAGGAGGGAAGGAGGAATCGATTATTGTTATAT
ATTCATTCCTCAGCATCTTGCCTTCACCCCTCCCTCCCTCCCTCCCGCCC
TTCCCCCCTCTCCAGGTAAATTCCCTTCCTCCCGGCTTCAGCAGCACCAC
CCTCCTCTCCCTCCATCTGCACTCGAGCCCGACCCTGGCCGTAGAGGAGT
GGGGCGGTGTTCTACGGTCGTACTACGGGACAAGGAAAGAGGGCGGGAGG
GAGGGCGGAAGGGAGGAAGTGACGAAGGATTATTTGAGCTACTACACCGA
CAACGGCGCCTATTACTACTACCTGACTGAAGAGAACAAGGTGAGGAAGG
AGGGGAGGGAGGGAGGGAAAGGAGGAGAGTCGGTTGGGGACGCCCAATTC
ACACTGTACCCCTCCCTCCCTCCCTCTAGACCTACGAGGAGACTCTCTTG
GACCTTATCTCCTACTCTCAAGCCCAGAGCATCTCTTACAATTCACACTG
TACCCCTCCCTCCCTCCCTCTAGACCTACGAGGAGACTCTCTTGGACCTT
ATCTCCTACTCTCAAGCCCAGAGCATCTCTTACAGCTCCCTGCAGATCGA
CTCCTGGTGGTACTTCAAGGTAGGGAAGGAGGGAGGGAAGGAGGGAGGGA
GGGAGAAGCCATTCGTGACACACACATACCCCTCTAAAAATTAACACACA
CACACACACACACACACACACACACACACACACACACACACACACACACA
CCCACACACACACACCTCTGAAGGAAAGAGGGAAGAGGGGCGTACACAAC
ATACATTTATACACACGCACATCCACCTTTCCTCCCTCCCTCCCTCCCTC
TTTCAAACGACACGACAGGGCAGGGACAATGGGACCTCGACCTGGGAGGC
GAAGCCGGACGTGTTTCCCTCCGGACTCGAGGTAGGTCTTGTTCCCTCCC
TCCCTCCCTTCCTCCTTCCCTCCCTTCCTCCCCGTCTCTCCGAATTTCTC
AATCTCCCTCCTTCCCTCCCACTCCATCTTCTTCCCTTCCTCCCTCGCCC
CCTGTTTTTGCATTGTAGGGCTTTCAGAGCGAGCTCCAGCTTCCTCTGAT
CGCCCACAACAGGTGGTGGTCCGTCGAGACGCCCTATGCCTGCCAGGTAG
AAGGGGAGGGAGGGAGGGAGGGAGAGGGGGAGGGAGGGGAAAGAAAGCTG
CTTCTGTGCAGCCCGATTTGAATTCAACAGGTATAAGTACCAGTATACAC
ACGTATCCGTATACATACATACCTGTATACGCACGTAACTCCATGCACCC
TTGTACTCATACACACAGTTAACTCCATGCACCCATGCACTCATACACAC
ACGTAACTCATGTACACACGTAACTCCATGCACCCTTGTACTCATACACA
CACGTAACTCATGTACACACGTAACTCCATGCACCCATGCACTCCTACAC
GCGACCAGAACGGTGGGAACTACTCTTTTGTGGTGGAGCGGCGTCAACCC
CTTCCTCCGTCCCTCCCTCCTCCCTTGGGGGCAGGGGGGACAGATAGATA
CGATGGTATGCAGACACCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTTCC
CCCCTCCCTCCATTCAAACATATCCAACACAAGGCAAACATCAGTTTTCG
AATCCTTCCTCCTTCCCTCCCCTCCCTCCCTCCCCAGCTCCCTCCTCCCC
CCCTCGTCAGCGGCGGCGTCTTTTCGGCGATGATGTTGTCCCTCTCTCTT
ACGGTGCTGCCCTCCCACTCCAAGAGAGCTTCTGGACCGATCTTTTCCGA
CAGGGGAAGACGTGGGGTCTGCGCGTGTACGAACAGGTGATTCATGCAAA
GAAAGAGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGACAGAAATGA
GTGTGGGTTCTCTTTCTTCCTCTTTCCCTCCCTCCCCCCCGGCCTTCCTC
CCCAATCCCCTTGCCACCCACACTCCTCTCTAACCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTTTCAGGACTGGCTCCACAATACCTTCCTCTC
CCTGAACCACACTCTTGCCACCCACGACGGGGCGCGCACCTGGCTCATGC
AGATGGGCCGAGCCGCAGAGAAGGTGAGGAGGGAGGGAGGGAGGGAGGGA
GGGGAGAAAGGAGAAGAAGGGTAAGACCCGTAGTAGCAATGCATATAAAT
TCCCTCGTCTCAAGGGACTCGCTCTCCGCCTTCCTCTTGTTGAGGAAGGA
AGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGAAGAAAGGTCAGGTACTAA
ACAAAGGCGTTTGCATTCACTCGTTCTTCGTTCTCCTTCGCATTGGTTAA
TATATACACATGATAATACATAACTACACAGGAGGGAATTATCATTCAGT
ACTGTATGGCCTTTCCCCGCTTCTACTTGCAGGTACACCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCTGCCCGCCCTCCATCTGACCCCCTCGTC
CTTCCCTCCCTCCCGCCCTTCCTCAGACCCTCGAGCTCCCTGCCGTCAAG
CAAATCCGCGTCTCGGATGATTATGGGCCCTCCAGTCGCCCGGATCAGTG
GTCGTGTGGGGATACGTCTCTGCTTGCTCATGCCCTGGGTTTGGTGCCCT
TCAAGGTAGGTAGGTAGGTAGGGAGGGAGGGAGGGATGGTCGTTAGGATA
TGTCCTTCTCTCCCCTCCCGCCTTGGCCAATCGGTCCTCTATTCCTCCCT
CCCTCCCTCCCTCCCCCAGGACGTGTTCTGGTCGTCGGCCGTGCAGGAAG
GCAATCCCTACGACCCGTCCACGCGCGAAGGGAAGCCTAATTTGGAGGTA
GGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGTAGGTGG
AAAGAGGGGGAAGGAAACAACAAGATGGAACCTCACCTTCTCTGCCTCTC
TTCCTCCCTTGTCCCCTCCCTCCCCCCTCCTTCGCTCCTTCCCTCCCCTC
CTCCTCAGGCGGCCATCGCCACCCTTTCCACAGGCCCTGTGTCCGCGGGG
GACAAGAAGGAAGCTGAGGACAAGGAGCTGTTGCTTCGGTCGTGTGATCA
AGAAGGGAAGATCCTTAAGCCGTCCCGCCCCCTCACCACCCTCGATGCTG
TGTGGAAGAGGTACGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAA
GAAGAAATAGGCAAAGGATAAAGAAGTGTTGCTTCGTTCTAAAGCGGGGC
AGGGAGGGAAGGAGGGAAGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGAG
GATGGATGGGGAAGAGCAGATGAATCATCCATGCTTCCTCGGCCCTTCAC
CCCCCCCTTTATTCTAACCAATCTTATCTAACCCTTCCCTATCCTTAACT
TACCTCACCCTACCCTACTCTACCCTCACCTTATCCTTAAATTATCCCAC
CTTATCCTTTAATTATCCCACCTTATCCTTTAATTATCCCACCTTATCCT
TAAATTATCCCACCTTATCCTTACCTTACTCTTACCTTACCCTACCCTTA
TCCTTACCTTGTAAACCTTACCTTACCTTACTTTTATAAATAATAAATAA
ACCTTACCTTACCCTTACCTCACCTTATCCTCACCTTACATACCTTACCT
TGTCCTACCCTTATCTCTACCTTACCCTTACCTCACCTAATCCTTACCTT
ATAAACCTTACCTTACCCTACCTTTATCTTTACCTTACCCTTACCTCACC
CTCACCTTTTACCTTCTTGGGAACAGGAGGGCGTTCGGCGCAGAGGTGGT
GGAGGGAGGGCCGGACGGGCTCGTGATGGCGACCCATGCCACCCTCCCCC
TCGACCTGTGGAAGATAGGGAAACGGGGAGGAGCAGAAGATACAGCGATG
GAACTGGAGGTGGAGGAGTTGCAGTACGTGCCCTTTTGTTTCTCTCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTTTTGTTGTTATGCCTT
CTGGGTCGTGGTGGCGATCTTTCCCACCTTCTCATGCTTTGCTTCTTCCT
CCCTCCTTCCCTCCCTCCTTTCTTTCCACAGCTTTGATATCTTTCTAGCT
GCCGCCTTGGACGCCCCATTCCCCCTGCACCCGTCCAACCTCCCTCCAAA
CCGCCATCCCTGCAATTCCTGGGAATGTGGGAAGGAGGAGGGAGAGGGGA
GGAGGAGGGTGGCTTTTGTGTCGCCCTATTCAGGGAATGGTTCATACGCT
GATTTTGTCGAGAGAGGGACGATTGCCTTGCAGGTAGATAGGGAATCGGG
GAGTGAGCGAGGGAGTGAGTGAGTGAGGGAGGGAGGGAGGGAGGGAGGAG
ACTGAGTACTAATTTCCTCCTCCTTCCTCTCCCCCTCCCCTTCCTCCCTC
CCCCAGCCCTTCGACGAGACTCACCCCATCCTCCTGCCTTCCTGCGACCG
CCACGACTTTGCCCTCTACTACACTGCGCCGCTTCTCCCTCTCTGGTTGT
CACCCTCATCCTCGTCCTCGTCCGACCCCTCATTTTATCTAGAGGACAAA
GCAGGAGCAGAAGCGATTATTCGCCGTCTCCGCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCTTCCTCCCATGTTGTACACCTCCTCTTCCTCGGTGAG
CTCAACAAATGGAGCCCCTTCGCCCCTCAGCGCTTCTCTTCCTTGGCCTT
TCTCCCCACCCACCGCTCCCTCCTCCTCGCCGTTCAGGGCGGGAGAGAGG
AAGTTGTGGAGGTTTCCTTCGCAGTGTTAGAAGACGGAAGAGGGCATGGA
GGGAGCGAGGGAGAGGTGGAGGTGATTCGTGTGAGAGTGACGATGGATTG
GCATGGAGAGGCGAGGCTGCGGGTGCAGGTGGAGGAGAAGGGCGGGGGCC
AGGGGGAAAGGAAGAGGAGGATAATTGTAGCGACACAGGAGTAGAAAAGC
GAGAAGGGAAAAGATATGGAGAAGTGCCCGTTGGAATTTATCAGTTAATA
TCTTACACATATATGAATATACTCGCACTTGTGTGTGTGTGTCCGTGTGT
GTGTGTGTGTGTGTGTGT

Coding sequence (CDS) from alignment at chr7:122823..129840+

>NO07G00310.1 ID=NO07G00310.1|Name=NO07G00310.1|organism=Nannochloropsis oceanica|type=CDS|length=2958bp|location=Sequence derived from alignment at chr7:122823..129840+ (Nannochloropsis oceanica)
ATGCGTCCCCCGCCCCGACACTTCCTCCTCCTTCTTCTTCTCCCGCTTTT
CGCCGCTGCCTCCCCCTTCTCCCTGACTCTCGGCCCCTCCAACCTCTCGC
TCTCCCTCTCCCTGACCCCGTCATCCGTGGACTCGTCCTCCTTCCCGCCC
TCCTTAAATGCCTCCATCACCCTACCTTTGAGCCACATCGGCTTTAAGTA
CCACGGTCGCTTCCTTTGCCCTCCACATGTGGACGCCGGGACGGGTGGTG
TCGTCCAAGGCGGGCTCGTCCTGCATGCTATGTCGGAAGAGCGGCAAGGG
TGGGACAGGCTGGGAGAATTCGTGGCTTGGAGCCTGGAATGGCAAGTTGA
AGAAAAGCACGAGACAATCCCTGTCTTCTTCCAGACCAACATCCGCGTGT
ACGTCTCCTCGCCCCTCCTCTATCTGATAGCCTTCGAGCAGGTCTTCCCC
CAGGGCACAGAGGGGTCGGCTTCACTCTATGCAGACGAGGTCATCTCCTC
CTTCCCTGCCTTCGCCACCGGACCGGACAGCGAGTGGGAAGAGTATGGCT
TTCTTACCTACGCTCACAATATGGCGTGTGCGGAAGGTGTTCTTTTCTGT
ACTCCTGTTGGTCGAATGGGTGGACGGAAGGAGGACATAGCGCTCTTGTC
GGATTCGACGGGGCAGACGAGGGAAGGAGGGAAGGAGGGACGGAGGAAGG
GACAGCCCCCGCTGGTGATACTTTCTCCCCTGGACAATTTTATGGCCATG
AATGTGTTCTTTGAGAATAGAAGCCAGGTGCTGCAGTACGGAGTGCAGGG
AAAGGTAAATTCCCTTCCTCCCGGCTTCAGCAGCACCACCCTCCTCTCCC
TCCATCTGCACTCGAGCCCGACCCTGGCCGTAGAGGAGTGGGGCGGTGTT
CTACGGTCGTACTACGGGACAAGGAAAGAGGGCGGGAGGGAGGGCGGAAG
GGAGGAAGTGACGAAGGATTATTTGAGCTACTACACCGACAACGGCGCCT
ATTACTACTACCTGACTGAAGAGAACAAGACCTACGAGGAGACTCTCTTG
GACCTTATCTCCTACTCTCAAGCCCAGAGCATCTCTTACAGCTCCCTGCA
GATCGACTCCTGGTGGTACTTCAAGGGCAGGGACAATGGGACCTCGACCT
GGGAGGCGAAGCCGGACGTGTTTCCCTCCGGACTCGAGGGCTTTCAGAGC
GAGCTCCAGCTTCCTCTGATCGCCCACAACAGGTGGTGGTCCGTCGAGAC
GCCCTATGCCTGCCAGAACGGTGGGAACTACTCTTTTGTGGTGGAGCGGC
GTCAACCCCTTCCTCCGTCCCTCCCTCCTCCCTTGGGGGCAGGGGGGACA
GATAGATACGATGCTCCCTCCTCCCCCCCTCGTCAGCGGCGGCGTCTTTT
CGGCGATGATGTTGTCCCTCTCTCTTACGGTGCTGCCCTCCCACTCCAAG
AGAGCTTCTGGACCGATCTTTTCCGACAGGGGAAGACGTGGGGTCTGCGC
GTGTACGAACAGGACTGGCTCCACAATACCTTCCTCTCCCTGAACCACAC
TCTTGCCACCCACGACGGGGCGCGCACCTGGCTCATGCAGATGGGCCGAG
CCGCAGAGAAGGAGGGAATTATCATTCAGTACTGTATGGCCTTTCCCCGC
TTCTACTTGCAGACCCTCGAGCTCCCTGCCGTCAAGCAAATCCGCGTCTC
GGATGATTATGGGCCCTCCAGTCGCCCGGATCAGTGGTCGTGTGGGGATA
CGTCTCTGCTTGCTCATGCCCTGGGTTTGGTGCCCTTCAAGGACGTGTTC
TGGTCGTCGGCCGTGCAGGAAGGCAATCCCTACGACCCGTCCACGCGCGA
AGGGAAGCCTAATTTGGAGGCGGCCATCGCCACCCTTTCCACAGGCCCTG
TGTCCGCGGGGGACAAGAAGGAAGCTGAGGACAAGGAGCTGTTGCTTCGG
TCGTGTGATCAAGAAGGGAAGATCCTTAAGCCGTCCCGCCCCCTCACCAC
CCTCGATGCTGTGTGGAAGAGGAGGGCGTTCGGCGCAGAGGTGGTGGAGG
GAGGGCCGGACGGGCTCGTGATGGCGACCCATGCCACCCTCCCCCTCGAC
CTGTGGAAGATAGGGAAACGGGGAGGAGCAGAAGATACAGCGATGGAACT
GGAGGTGGAGGAGTTGCACTTTGATATCTTTCTAGCTGCCGCCTTGGACG
CCCCATTCCCCCTGCACCCGTCCAACCTCCCTCCAAACCGCCATCCCTGC
AATTCCTGGGAATGTGGGAAGGAGGAGGGAGAGGGGAGGAGGAGGGTGGC
TTTTGTGTCGCCCTATTCAGGGAATGGTTCATACGCTGATTTTGTCGAGA
GAGGGACGATTGCCTTGCAGCCCTTCGACGAGACTCACCCCATCCTCCTG
CCTTCCTGCGACCGCCACGACTTTGCCCTCTACTACACTGCGCCGCTTCT
CCCTCTCTGGTTGTCACCCTCATCCTCGTCCTCGTCCGACCCCTCATTTT
ATCTAGAGGACAAAGCAGGAGCAGAAGCGATTATTCGCCGTCTCCGCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCCATGTTGTACACCTCC
TCTTCCTCGGTGAGCTCAACAAATGGAGCCCCTTCGCCCCTCAGCGCTTC
TCTTCCTTGGCCTTTCTCCCCACCCACCGCTCCCTCCTCCTCGCCGTTCA
GGGCGGGAGAGAGGAAGTTGTGGAGGTTTCCTTCGCAGTGTTAGAAGACG
GAAGAGGGCATGGAGGGAGCGAGGGAGAGGTGGAGGTGATTCGTGTGAGA
GTGACGATGGATTGGCATGGAGAGGCGAGGCTGCGGGTGCAGGTGGAGGA
GAAGGGCGGGGGCCAGGGGGAAAGGAAGAGGAGGATAATTGTAGCGACAC
AGGAGTAG

Synonyms

Publications