NO06G00100.2, NO06G00100.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO06G00100.2
Unique NameNO06G00100.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length904
Alignment locationchr6:49830..51294 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:49830..51294 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00100.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G00100NO06G00100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO06G00100.2NO06G00100.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO06G00100.2.cds1NO06G00100.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G00100.2.cds2NO06G00100.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G00100.2.cds3NO06G00100.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G00100.2.cds4NO06G00100.2.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO06G00100.2 ID=NO06G00100.2|Name=NO06G00100.2|organism=Nannochloropsis oceanica|type=mRNA|length=904bp
ATGGTCCCACCCTCCCCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCGC
CCTACTGGCTTCCCTGCGAGATGAGCTCCGACGTATCGATGAGGACGTCG
CCCGCTCCCTTGTCAAGGTGGACAAGTCGATGGAAACGTGGCGGGAGGAA
TTGAAGAGGGTCATCGGGTGCTTAGCATCGGCCCCGCTACCGTCATTCCA
AGAAGGAAGCAGCAATACAGAGGAAGAGGAAGACGACTTTCCTTCTCTCA
ATCCATCCCCGGGGTCTCTGTGGGTGGGAAGGATGGAAGCGGCGTCGGCA
GGCATGGAGGGGGGTAGGGAGGGAGCGCTTTTGTTGCTGCAGAGGCTCCA
GTGGAGGTGTGAAGGGATAAGGGAGAGAGTGAGGAAGTTAACGAGGATAA
GGACGAGAAAAGAAGAGCAAAGGGGAGAGGAAGGGGGGGCGGTGAAGGAA
GGGAGGGAAGGAGCGGAGATAGTGTCCATGGAAGCGCTGCTGAAGCAAGG
AGAGGGACACGATGGTTTTGGTAAGGAAGAGCGCTCACACATCATCCCTC
TTTCCCTCCTCCCCTCACCTTCCCTTCGTCCTTCTCCTCACACCCTTCCT
CCCTCCTTCCCCCCCTGTCTTCCCCCCTCCTCAAGGGTTTATTTCCTCCC
TGACTCAAATCGAGGCCAAGTTGGACGCCACGTGGGAGGAGGTCGAGACC
TTGGAGTATATCACAGCGTCTGTCCATAGGCTAGCCGTGCCCTCCTTGGG
AAGAGGGAGGGAGGGAGGGAGGGAAAAAGGGAGGCAGGGAGGGAGGGAGC
GGTTGGCACTGCTGTCGCTACTGCTACAACAGGAGGTTGTGTAGGAGGAA
GAGAGGGAGGGAGGGAGGGAGGGTGAAAGGGAGGATGTACATATAGACAA
GGCC
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protein sequence of NO06G00100.2

>NO06G00100.2-protein ID=NO06G00100.2-protein|Name=NO06G00100.2|organism=Nannochloropsis oceanica|type=polypeptide|length=243bp
MVPPSPSPSSSSSSSSALLASLRDELRRIDEDVARSLVKVDKSMETWREE
LKRVIGCLASAPLPSFQEGSSNTEEEEDDFPSLNPSPGSLWVGRMEAASA
GMEGGREGALLLLQRLQWRCEGIRERVRKLTRIRTRKEEQRGEEGGAVKE
GREGAEIVSMEALLKQGEGHDGFGKEERSHIIPLSLLPSPSLRPSPHTLP
PSFPPCLPPSSRVYFLPDSNRGQVGRHVGGGRDLGVYHSVCP*
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mRNA from alignment at chr6:49830..51294+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO06G00100.2 ID=NO06G00100.2|Name=NO06G00100.2|organism=Nannochloropsis oceanica|type=mRNA|length=1465bp|location=Sequence derived from alignment at chr6:49830..51294+ (Nannochloropsis oceanica)
ATGGTCCCACCCTCCCCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCGC
CCTACTGGCTTCCCTGCGAGATGAGCTCCGACGTATCGATGAGGACGTCG
CCCGCTCCCTTGTCAAGGTGGACAAGTCGATGGAAACGTGGCGGGAGGAA
TTGAAGAGGGTCATCGGGTGAGGCCAGTGGGCAGATAGGGGATGGATGAA
GAGACAATCTTGAAAGACAAAGATATAAATGGAAGAGGGCATGGAATAGT
GGACAAAGTATACCTTGAGTGCAGTGGTGTGGGCTGAAGTGCCAGAAGCA
TAGATATGTAGACACATGGTGATGCTCTCGGAGTCTGCCTTCTCACCGTC
CTTTCCCCATCTATTTTTGGTTCCGCACAGGTGCTTAGCATCGGCCCCGC
TACCGTCATTCCAAGAAGGAAGCAGCAATACAGAGGAAGAGGAAGGTGAG
AATTTATTCTCTCTACTTTCTTCTTGTCTCACTTCCTTCCATCCTCATAT
TGACCTTTCATGGATACCATGGATACACCACGGGCGAAGTGTTGTCCTTA
CCTCTTCTGCCCTTCCTCCCTCTCAAACTCCCTCTCTCTCTCTTTCCGTA
GACGACTTTCCTTCTCTCAATCCATCCCCGGGGTCTCTGTGGGTGGGAAG
GATGGAAGCGGCGTCGGCAGGCATGGAGGGGGGTAGGGAGGGAGCGCTTT
TGTTGCTGCAGAGGCTCCAGTGGAGGTGTGAAGGGATAAGGGAGAGAGTG
AGGAAGTTAACGAGGATAAGGACGAGAAAAGAAGAGCAAAGGGGAGAGGA
AGGGGGGGCGGTGAAGGAAGGGAGGGAAGGAGCGGAGATAGTGTCCATGG
AAGCGCTGCTGAAGCAAGGAGAGGGACACGATGGTTTTGGTAAGGAAGAG
CGCTCACACATCATCCCTCTTTCCCTCCTCCCCTCACCTTCCCTTCGTCC
TTCTCCTCACACCCTTCCTCCCTCCTTCCCCCCCTGTCTTCCCCCCTCCT
CAAGGGTTTATTTCCTCCCTGACTCAAATCGAGGCCAAGTTGGACGCCAC
GTGGGAGGAGGTCGAGACCTTGGTACGTCCCACCCCTCCCTCCCTTCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCGCCCTTCG
TTCCTTCGTTCCTTCCCTCGTCGTTTGTTGGTTATTGTCACCGTTATATG
CTGAGTGACAAGCTCTCTCTATCCCTCCCTCCCTCCCTTCCTTCCTCCCT
CCTTCCCTTCTCAGGAGTATATCACAGCGTCTGTCCATAGGCTAGCCGTG
CCCTCCTTGGGAAGAGGGAGGGAGGGAGGGAGGGAAAAAGGGAGGCAGGG
AGGGAGGGAGCGGTTGGCACTGCTGTCGCTACTGCTACAACAGGAGGTTG
TGTAGGAGGAAGAGAGGGAGGGAGGGAGGGAGGGTGAAAGGGAGGATGTA
CATATAGACAAGGCC
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Coding sequence (CDS) from alignment at chr6:49830..51294+

>NO06G00100.2 ID=NO06G00100.2|Name=NO06G00100.2|organism=Nannochloropsis oceanica|type=CDS|length=729bp|location=Sequence derived from alignment at chr6:49830..51294+ (Nannochloropsis oceanica)
ATGGTCCCACCCTCCCCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCGC
CCTACTGGCTTCCCTGCGAGATGAGCTCCGACGTATCGATGAGGACGTCG
CCCGCTCCCTTGTCAAGGTGGACAAGTCGATGGAAACGTGGCGGGAGGAA
TTGAAGAGGGTCATCGGGTGCTTAGCATCGGCCCCGCTACCGTCATTCCA
AGAAGGAAGCAGCAATACAGAGGAAGAGGAAGACGACTTTCCTTCTCTCA
ATCCATCCCCGGGGTCTCTGTGGGTGGGAAGGATGGAAGCGGCGTCGGCA
GGCATGGAGGGGGGTAGGGAGGGAGCGCTTTTGTTGCTGCAGAGGCTCCA
GTGGAGGTGTGAAGGGATAAGGGAGAGAGTGAGGAAGTTAACGAGGATAA
GGACGAGAAAAGAAGAGCAAAGGGGAGAGGAAGGGGGGGCGGTGAAGGAA
GGGAGGGAAGGAGCGGAGATAGTGTCCATGGAAGCGCTGCTGAAGCAAGG
AGAGGGACACGATGGTTTTGGTAAGGAAGAGCGCTCACACATCATCCCTC
TTTCCCTCCTCCCCTCACCTTCCCTTCGTCCTTCTCCTCACACCCTTCCT
CCCTCCTTCCCCCCCTGTCTTCCCCCCTCCTCAAGGGTTTATTTCCTCCC
TGACTCAAATCGAGGCCAAGTTGGACGCCACGTGGGAGGAGGTCGAGACC
TTGGAGTATATCACAGCGTCTGTCCATAG
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Synonyms
Publications