NO06G00040.4, NO06G00040.4 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G00040.4
Unique Name	NO06G00040.4
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3105
Alignment location	chr6:17041..22166 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:17041..22166 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO06G00040.4 vs.
Match: EWM20460.1 (Peptidase S10, serine carboxypeptidase, partial [Nannochloropsis gaditana])

HSP 1 Score: 164.9 bits (416), Expect = 1.100e-36
Identity = 91/154 (59.09%), Postives = 105/154 (68.18%), Query Frame = 0

Query:  662 LLYQGQFDVKDGPISNQAWIRNLKWSGQKGYLQANRTRWYLPEEDN-----EGR-EGAEKAPLQVGWVQRYDLLTEAVVAGAGHLVPMDQPVAALDMITRFIEGEAPFAPEAAPVVEENGLEGGEDGSGAVLL-------ALNEGLEDAVRQEM 803
            LL QGQFD+KDGPISNQAWIR LKWSGQ+GYL ANRTRW+L +E+      EGR EG E   +Q GWVQRY LL EAVVAGAGHLVPMDQP+AALDMITRFIE  APFA       EE  +E  + G   + +        L E  ++ + QEM
Sbjct:   24 LLDQGQFDLKDGPISNQAWIRALKWSGQQGYLNANRTRWFLEDEEGRDGGKEGRREGREAESVQAGWVQRYGLLIEAVVAGAGHLVPMDQPLAALDMITRFIENRAPFAHS-----EEEKVEKEKHGDERIYMDTMEAENGLMENFDERLSQEM 172

The following BLAST results are available for this feature:

BLAST of NO06G00040.4 vs.

BLAST of NO06G00040.4 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM20460.1	1.100e-36	59.09	Peptidase S10, serine carboxypeptidase, partial [N...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO06G00040	NO06G00040	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO06G00040.4	NO06G00040.4-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO06G00040.4.cds1	NO06G00040.4.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds2	NO06G00040.4.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds3	NO06G00040.4.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds4	NO06G00040.4.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds5	NO06G00040.4.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds6	NO06G00040.4.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds7	NO06G00040.4.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds8	NO06G00040.4.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds9	NO06G00040.4.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds10	NO06G00040.4.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds11	NO06G00040.4.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds12	NO06G00040.4.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00040.4.cds13	NO06G00040.4.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr6:17041..22166+
coding sequence from alignment at chr6:17041..22166+

mRNA sequence

>NO06G00040.4 ID=NO06G00040.4|Name=NO06G00040.4|organism=Nannochloropsis oceanica|type=mRNA|length=3105bp
GTGAAGAGCACGCTCAAGAGGCCTATGTTAGATGCAGGGGGAACAGGGGA
ACAGAGGGCGTGAGAAGGAAGGAGCTACGAGTGATTTGACTCTTTTTTGG
TTTCTCAGCCCGTCAAACAATGCCAGTCACGGAAGAGCGATAATGTGCCT
TTACGTAGTATATGCTAAAGATCAGCGCACATGCTTGTCGTCAGCGCCGT
GCTGGGAGCTGGTCGAAGCGACAACTTGGAGGCGAGGACGAGGACGTGTC
AGGGAGGTCGGTCCTGTGCAAGGAGCTAATATTTTTTTGGTAGGATTCTG
GACTTGCTTTTCTATGATCTTGCTCCTCGCTTTCCCACTGCATCCTCATA
GAAGCGTGGGAGAATGGATATCTTCGCTTATTGGGTATCACAGCGACATC
TACATTCCCCAAGGAAAGTGTCAACATGTCCACTGTTTGCGAGGGGTGTC
AGAAGAGCCCTTGTGACGCGTGCAACAGCAAAATCGCCTTGTAAGGCCCT
CGCCAAAAAACGGGTATGCAGATGCTGTAGGTCACAGCACTTGGGGAAAG
GCAACGGTGGTCTCAATTATATACCTTCTGTACAACAAAACTGTGTATAT
TCTTTCCGCCCTTGGTTAGTGGGTGTACATGCCACGCACCCCCCTGTACC
CCCCCCTGCCTTTTTTTAAACTGGCAGCAGCCCATATCAAGCTCAAGCTC
AAGCACATTAATTTGCCCACTCCAACTTCCCCATTCCCCCGCAGGCGTAG
GCAAACAAGCCGCGAAAATAGCACGGATGATTCACGGTGTGCCGTGGCTG
GGGCCCGCTCTCGCTTGGGCTCTTATTTGAATTTGCTACAGTCAAATCTC
CTCAATGCCACACATCATCACCCCCCACGGCCACACTACACAATTTATCT
GGGGCCTGAGAAACACGTAGGCCATGAATGCGTTCCAGTGGCCTTGTCAC
CTTTGATGTGGTCGCCTCAAAGCTATGCATATGATACTCTGCCTTCTAGA
ATCAGTGCTGCGTCTCCCTGCTTCCGATCCTCCCTCCCCCGGGAGTACAG
GACCCGCTGCTGCGGCCAGGGGCTTGCAACTCGCACACGATGCAAGCGCA
CCGAAGCATGTCTTTTTCAATCCATCTCTGCTATAACTATTCTTATCTCT
TCCACCTTTACAACCCCCCAGACACACACACACGCCATGCGTCCGCTCTC
CCTCCTCGCCTTTTTGCTCCCCGCCCTCCTCGCCGTCACCAATGGAGTCC
CCTCATCCTTCCAGTCGGGCCTCCTCCCCGTCACTCGCAACTCGTCTCTC
TTCTACTGGTACTGCCCTCCTTCCGGCCCTGCCTCTCGTCCCCCCCTCTC
CACCAACTCCACGCCTCTGATTCTGTGGTTGCAAGGGGGGCCGGGGGCGA
GTGGTTTAATTGGGTTGCTCTACGAGATGGGGCCGTACCGACTCGAGAAG
GACAATGCTTCTTCTTCCTTCTCCCTTGTCGACCGCACTGTCGGTGCTTG
GAGCGAAAGTTATGGGATGCTCTTCGTAGATTCTCCTGTCGGCACGGGCT
TCAGCGAGGTGGGAGGACCGGACGCTTACTCTCGCACTGAGGAGGACGTG
GCCGAGAATCTCTACGTCTTCTTGCAGGGCTTCTACGCCATGTACCCGGA
GCTGCTGGATGGCGGGCTCTACATCATGGGCGAGAGCTATGCGGGCCACT
ACATCCCATCCCTCGCTACCTACCTCCTGCGCCGCAATGACGACATTCCT
CTCCCCACCTCCTCCCCTACGACCTCCCCCTCTACCTCCCCCTCTACCTC
CCCCTCTACCTCCCCCTCTACCTCCCCCATGGCCCCTCCCACCGCCTCCC
CCTCTACCTCCCCCTCTACCTCCCCCTCTACCTCCCCTATCGCCCCTCCC
ACCGCACTTCCCACCTCATCACCTTTTCCCCCCGTTTCCTCCTCCTCCTT
GCATCTGCGTGGTGCAAGTTCTGCGGTGATGCGGGAAGAAAAAAGCGCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCCCGGTCTACATTCCTCTCAAGGGTATTGCCATCGGAAA
CGGCCTCACCAACCCCGCCCTCCAGGTGATGGCTAAGGCCCGCGTCGCCT
ACGACATGGGCTTGCTCAACGGAAAGGAGGTCCGTCTAACCCTTCCTCGC
CCCCTCCCTCCACCTCCTAGAATAATACGCCCTCCCTCCCTCACTCCTTC
CCTCCCTCCCTGGCAGTTCCTCCAAGCGCGCGCCTACGCCCTCTATGCAG
CCTTGTCGGCCCTCGACGGCGACTACCTGACTGCCCGCGAGTACAGAGGC
TTGCTCGAGGACTACATCGCCTCGACCTCCGGTGTGAACCTCTACGACGC
CCGCCTCCTGTCCCCCTACTCCTTCGAACCCGAGATTCAAACATGGGCCA
ACACCCCCCAGGCCAAGCGGGCCCTGCACTTGCCCCTGAATGCCACGTGG
AAGACCAGCGAGGAGTATGAAGCAGCAGCGGGCGAGTCTTTGAACGAAGA
TCTGATGGTTTCGTACGCCAAGGAGGTGGCTCTTATCCTCGACCACTACC
GCGTGCCTGTCCTTCTCTACCAAGGACAATTCGACGTCAAAGATGGCCCT
ATCAGCAATCAGGCCTGGATTCGAAATCTCAAGTGGTCGGGCCAGAAGGG
TTACCTGCAAGCAAACCGAACCCGCTGGTACCTTCCCGAGGAGGACAACG
AAGGAAGAGAGGGGGCCGAGAAGGCACCATTGCAAGTGGGATGGGTGCAG
CGATACGATTTGCTTACCGAGGCAGTCGTGGCGGGGGCGGGTCACCTAGT
GCCCATGGACCAGCCAGTTGCTGCCCTCGACATGATCACACGCTTTATTG
AGGGCGAGGCGCCTTTTGCGCCTGAAGCTGCCCCTGTCGTTGAAGAGAAC
GGGTTGGAGGGAGGGGAGGATGGAAGCGGAGCAGTGCTGCTTGCATTAAA
CGAGGGGCTGGAGGACGCGGTGCGACAAGAAATGTAACGGCGCAAAGGAT
TGATACGTGTGGGAGGGGAGTAAAAGAAACGAATTTGACGTGAAACTCGC
TGCAA

protein sequence of NO06G00040.4

>NO06G00040.4-protein ID=NO06G00040.4-protein|Name=NO06G00040.4|organism=Nannochloropsis oceanica|type=polypeptide|length=803bp
MPRTPLYPPLPFFKLAAAHIKLKLKHINLPTPTSPFPRRRRQTSRENSTD
DSRCAVAGARSRLGSYLNLLQSNLLNATHHHPPRPHYTIYLGPEKHVGHE
CVPVALSPLMWSPQSYAYDTLPSRISAASPCFRSSLPREYRTRCCGQGLA
TRTRCKRTEACLFQSISAITILISSTFTTPQTHTHAMRPLSLLAFLLPAL
LAVTNGVPSSFQSGLLPVTRNSSLFYWYCPPSGPASRPPLSTNSTPLILW
LQGGPGASGLIGLLYEMGPYRLEKDNASSSFSLVDRTVGAWSESYGMLFV
DSPVGTGFSEVGGPDAYSRTEEDVAENLYVFLQGFYAMYPELLDGGLYIM
GESYAGHYIPSLATYLLRRNDDIPLPTSSPTTSPSTSPSTSPSTSPSTSP
MAPPTASPSTSPSTSPSTSPIAPPTALPTSSPFPPVSSSSLHLRGASSAV
MREEKSASSSSSSSSSSSSSSSSSSSSSPVYIPLKGIAIGNGLTNPALQV
MAKARVAYDMGLLNGKEVRLTLPRPLPPPPRIIRPPSLTPSLPPWQFLQA
RAYALYAALSALDGDYLTAREYRGLLEDYIASTSGVNLYDARLLSPYSFE
PEIQTWANTPQAKRALHLPLNATWKTSEEYEAAAGESLNEDLMVSYAKEV
ALILDHYRVPVLLYQGQFDVKDGPISNQAWIRNLKWSGQKGYLQANRTRW
YLPEEDNEGREGAEKAPLQVGWVQRYDLLTEAVVAGAGHLVPMDQPVAAL
DMITRFIEGEAPFAPEAAPVVEENGLEGGEDGSGAVLLALNEGLEDAVRQ
EM*

mRNA from alignment at chr6:17041..22166+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO06G00040.4 ID=NO06G00040.4|Name=NO06G00040.4|organism=Nannochloropsis oceanica|type=mRNA|length=5126bp|location=Sequence derived from alignment at chr6:17041..22166+ (Nannochloropsis oceanica)
GTGAAGAGCACGCTCAAGAGGCCTATGTTAGATGCAGGGGGAACAGGGGA
ACAGAGGGCGTGAGAAGGAAGGAGCTACGAGTGATTTGACTCTTTTTTGG
TTTCTCAGCCCGTCAAACAATGCCAGTCACGGAAGAGCGATAATGTGCCT
TTACGTAGTATATGCTAAAGATCAGCGCACATGCTTGTCGTCAGCGCCGT
GCTGGGAGCTGGTCGAAGCGACAACTTGGAGGCGAGGACGAGGACGTGTC
AGGGAGGTCGGTCCTGTGCAAGGAGCTAATATTTTTTTGGTAGGATTCTG
GACTTGCTTTTCTATGATCTTGCTCCTCGCTTTCCCACTGCATCCTCATA
GAAGCGTGGGAGAATGGATATCTTCGCTTATTGGGTATCACAGCGACATC
TACATTCCCCAAGGAAAGTGTCAACATGTCCACTGTTTGCGAGGGGTGTC
AGAAGAGCCCTTGTGACGCGTGCAACAGCAAAATCGCCTTGTAAGGCCCT
CGCCAAAAAACGGGTATGCAGATGCTGTAGGTCACAGCACTTGGGGAAAG
GCAACGGTGGTCTCAATTATATACCTTCTGTACAACAAAACTGTGTATAT
TCTTTCCGCCCTTGGTTAGTGGGTGTACATGCCACGCACCCCCCTGTACC
CCCCCCTGCCTTTTTTTAAACTGGCAGCAGCCCATATCAAGCTCAAGCTC
AAGCACATTAATTTGCCCACTCCAACTTCCCCATTCCCCCGCAGGCGTAG
GCAAACAAGCCGCGAAAATAGCACGGATGATTCACGGTGTGCCGTGGCTG
GGGCCCGCTCTCGCTTGGGCTCTTATTTGAATTTGCTACAGTCAAATCTC
CTCAATGCCACACATCATCACCCCCCACGGCCACACTACACAATTTATCT
GGGGCCTGAGAAACACGTAGGCCATGAATGCGTTCCAGTGGCCTTGTCAC
CTTTGATGTGGTCGCCTCAAAGCTATGCATATGATACTCTGCCTTCTAGA
ATCAGTGCTGCGTCTCCCTGCTTCCGATCCTCCCTCCCCCGGGAGTACAG
GACCCGCTGCTGCGGCCAGGGGCTTGCAACTCGCACACGATGCAAGCGCA
CCGAAGCATGTCTTTTTCAATCCATCTCTGCTATAACTATTCTTATCTCT
TCCACCTTTACAACCCCCCAGACACACACACACGCCATGCGTCCGCTCTC
CCTCCTCGCCTTTTTGCTCCCCGCCCTCCTCGCCGTCACCAATGGAGTCC
CCTCATCCTTCCAGTCGGGCCTCCTCCCCGTCACTCGCAACTCGTCTCTC
TTCTACTGGTACTGCCCTCCTTCCGGCCCTGCCTCTCGTCCCCCCCTCTC
CACCAACTCCACGCCTCTGATTCTGTGGTTGCAAGGGGGGCCGGGGGCGA
GTGGTTTAATTGGGTTGCTCTACGAGATGGGGCCGTACCGACTCGAGAAG
GTGATGAGGGATAGGGAGAACGCGGATGAGGGAATGGGAGCTTTTCTCGC
GGGGGCAGGGGAGGGGATGGAGGAATGGGAAAAAGTCATAATGAAATTCT
CACGCCGCGTTTACCACATAGGACAATGCTTCTTCTTCCTTCTCCCTTGT
CGACCGCACTGTCGGTGCTTGGAGCGAAAGTTATGGTCTGTATGACATCT
CTCTATATATATGTACATGACTTTATTGTCGTTTCTACTTGTGTCTAGCC
GCGCGCCTCCCTTCCTGCCTTGTTCCTGTCCATTACTGATTCCCTTCTTC
CCTCCCTCTCTCCCTCCCTCTCCCCCTCCTTCTTGCGTGTCCAGGGATGC
TCTTCGTAGATTCTCCTGTCGGCACGGGCTTCAGCGAGGTGGGAGGACCG
GACGCTTACTCTCGCACTGTAAGGAGCGAGAAAGGGAGGGAAAGAGGGAG
GGAGAAAGGGAGGGAGGGAGGAGACGATACCGGCTGCTCATCTCACGCAC
ATCTCACCACTAGGAGGAGGACGTGGCCGAGAATCTCTACGTCTTCTTGC
AGGGGTAGGTCTAGGGGGGAGGGAGGCAGGGAGGGAGGGAGGTGAAGAGG
AGGGTAAATGCACCCGTCTCTCCTGTAGAGCACAATCACAAGAAATTCAA
GCGTCTCCCCATTCACTGTCCGCTGTCTGCTTCCCTCACTCCCTTCCTCC
CTTCCTCCCTCCTCCCTCTTTCTCTCCCACCCTCCATCCCGCCTCGCAGC
TTCTACGCCATGTACCCGGAGCTGCTGGATGGCGGGCTCTACATCATGGG
CGAGAGGTGAAGGAGGGACGGAGGGGGGACGGAGGAGGGACGGAGGCAGA
ATAGGATGCAAGACAGGAGGAGACCGACAGACACACATTACCTGGAATCA
TGTTTCCTTCTCGCCCTCATCTCATCACCCCTTCTATCTGCCCTTTCTCC
TTCCCTCCCTCCCTCTTTCCCCCCCTCCCTCCCTCCCAGCTATGCGGGCC
ACTACATCCCATCCCTCGCTACCTACCTCCTGCGCCGCAATGACGACATT
CCTCTCCCCACCTCCTCCCCTACGACCTCCCCCTCTACCTCCCCCTCTAC
CTCCCCCTCTACCTCCCCCTCTACCTCCCCCATGGCCCCTCCCACCGCCT
CCCCCTCTACCTCCCCCTCTACCTCCCCCTCTACCTCCCCTATCGCCCCT
CCCACCGCACTTCCCACCTCATCACCTTTTCCCCCCGTTTCCTCCTCCTC
CTTGCATCTGCGTGGTGCAAGTTCTGCGGTGATGCGGGAAGAAAAAAGGT
GCGTCGTCTGTGTGTCTTTTGTGAGGCTGTGGAGGGAGAAAGAGCGAAAA
ACATCCATTAAGTGAGGCCTTCCACTGTATGTACACAATACACACACACA
CACACACACACACACACACTCACACACACACACACACACACACTCACACA
CACACACACACACACACACACACACACACACACACACACCACACACACAC
ACACACACACACACACACACACACACACACACACACACACACATGTGCAT
TTACAATGCTAACCATGTGATACTCTCCCCCTTCCCATTGTCCTCATACC
AGCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCCCGGTCTACATTCCTCTCAAGGGTATTGCCA
TCGGAAACGGCCTCACCAACCCCGCCCTCCAGGTCTGCCATTTCCCCCTT
CCTTCCTCCCTCCTTCCCTCCCTCCCCTCCTTCTCTTTTGCCTTCTTCGC
TGGCTCGCTTCTTCAGTTTACTCTTCACTTCATCTCTCAAATCCTCCCTC
CCTCCCTCCCTCCCTTCCTCCCCTCCTCCCTTCCTCCCTTCTTCTCTTCC
TAGGTGATGGCTAAGGCCCGCGTCGCCTACGACATGGGCTTGCTCAACGG
AAAGGAGGTCCGTCTAACCCTTCCTCGCCCCCTCCCTCCACCTCCTAGAA
TAATACGCCCTCCCTCCCTCACTCCTTCCCTCCCTCCCTGGCAGTTCCTC
CAAGCGCGCGCCTACGCCCTCTATGCAGCCTTGTCGGCCCTCGACGGCGA
CTACCTGACTGCCCGCGAGTACAGAGGCTTGCTCGAGGTGGGGAGGGAGG
AAGAGAAGGAGGGAGGGGAGGGGGGAACGGGACTGGCATGACATTGTTCT
CTCCGCATGACCGTTATACTCAGACCGTCCTCCGATCCCTCCCTCCCTCA
TTCCCCCCCCTCCCTCCCTCCCACAGGACTACATCGCCTCGACCTCCGGT
GTGAACCTCTACGACGCCCGCCTCCTGTCCCCCTACTCCTTCGAACCCGA
GATTCAAACATGGGCCAACACCCCCCAGGCCAAGCGGGCCCTGCACTTGC
CCCTGAATGCCACGTGGAAGACCAGCGAGGAGGTACAGGCGGATGCTTCT
CCACCATCACTCTTCCCTCCTCTCCTCCCTCCCTCCCTCGGCTTTTGGGG
AGTATGGAGAGTAGCAGGAACACGGGACGGTTTCTTCCTAGTCCCCCCCC
TTCCCTTCCTTCTTTCCCGTCGCCTGTGATCCTGGTCAAAGGGGAAAGAA
AGGCCACGCTCAAACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCAAGTA
TGAAGCAGCAGCGGGCGAGTCTTTGAACGAAGATCTGATGGTTTCGTACG
CCAAGGAGGTGGCTCTTATCCTCGACCACTACCGCGTGCCTGTCCTTCTC
TGTAAGTCTGCCCTTCCGTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCTC
TCCCTTCCTCCCATTTGCTCTCTTTCATCCTCACCATTCCTCTCCCCCCC
CTCTTTCCCTTCCTTCCTCCCTACCTCATCCCCCCCCAAGACCAAGGACA
ATTCGACGTCAAAGATGGCCCTATCAGCAATCAGGCCTGGATTCGAAATC
TCAAGTAAGGAGGAGTGGGAGGGAGGGAGGGAGGGAAGGGAAGAGAATGG
CAGGTGGCTTGTTGACTCAGCAACAGGAAGTGCGGAGGAAATGAACTTGT
GAAATACAATGCATATACACCTCCTTCCTTTCTTCCCTCCCTCTTCCATC
CCAACCACTCACCCCTCCCTGCCCAGGTGGTCGGGCCAGAAGGGTTACCT
GCAAGCAAACCGAACCCGCTGGTACCTTCCCGAGGAGGACAACGAAGGAA
GAGAGGGGGCCGAGAAGGCACCATTGCAAGTGGGATGGGTGCAGCGATAC
GATTTGCTTACCGAGGCAGTCGTGGCGGGGGCGGGTATGTTCACAGCGGG
GAGGAGCGTGGGAGGGTGGAATGGGGTGGGGAGGACGGGTTCGCACTTGA
CCCTGTTGATCACTCACCTTCCTTCTTCCCTCCCAAACTCCCTCCCATGA
CCCTCTGATAGGTCACCTAGTGCCCATGGACCAGCCAGTTGCTGCCCTCG
ACATGATCACACGCTTTATTGAGGGCGAGGCGCCTTTTGCGCCTGAAGCT
GCCCCTGTCGTTGAAGAGAACGGGTTGGAGGGAGGGGAGGATGGAAGCGG
AGCAGTGCTGCTTGCATTAAACGAGGGGCTGGAGGACGCGGTGCGACAAG
AAATGTAACGGCGCAAAGGATTGATACGTGTGGGAGGGGAGTAAAAGAAA
CGAATTTGACGTGAAACTCGCTGCAA

Coding sequence (CDS) from alignment at chr6:17041..22166+

>NO06G00040.4 ID=NO06G00040.4|Name=NO06G00040.4|organism=Nannochloropsis oceanica|type=CDS|length=2409bp|location=Sequence derived from alignment at chr6:17041..22166+ (Nannochloropsis oceanica)
ATGCCACGCACCCCCCTGTACCCCCCCCTGCCTTTTTTTAAACTGGCAGC
AGCCCATATCAAGCTCAAGCTCAAGCACATTAATTTGCCCACTCCAACTT
CCCCATTCCCCCGCAGGCGTAGGCAAACAAGCCGCGAAAATAGCACGGAT
GATTCACGGTGTGCCGTGGCTGGGGCCCGCTCTCGCTTGGGCTCTTATTT
GAATTTGCTACAGTCAAATCTCCTCAATGCCACACATCATCACCCCCCAC
GGCCACACTACACAATTTATCTGGGGCCTGAGAAACACGTAGGCCATGAA
TGCGTTCCAGTGGCCTTGTCACCTTTGATGTGGTCGCCTCAAAGCTATGC
ATATGATACTCTGCCTTCTAGAATCAGTGCTGCGTCTCCCTGCTTCCGAT
CCTCCCTCCCCCGGGAGTACAGGACCCGCTGCTGCGGCCAGGGGCTTGCA
ACTCGCACACGATGCAAGCGCACCGAAGCATGTCTTTTTCAATCCATCTC
TGCTATAACTATTCTTATCTCTTCCACCTTTACAACCCCCCAGACACACA
CACACGCCATGCGTCCGCTCTCCCTCCTCGCCTTTTTGCTCCCCGCCCTC
CTCGCCGTCACCAATGGAGTCCCCTCATCCTTCCAGTCGGGCCTCCTCCC
CGTCACTCGCAACTCGTCTCTCTTCTACTGGTACTGCCCTCCTTCCGGCC
CTGCCTCTCGTCCCCCCCTCTCCACCAACTCCACGCCTCTGATTCTGTGG
TTGCAAGGGGGGCCGGGGGCGAGTGGTTTAATTGGGTTGCTCTACGAGAT
GGGGCCGTACCGACTCGAGAAGGACAATGCTTCTTCTTCCTTCTCCCTTG
TCGACCGCACTGTCGGTGCTTGGAGCGAAAGTTATGGGATGCTCTTCGTA
GATTCTCCTGTCGGCACGGGCTTCAGCGAGGTGGGAGGACCGGACGCTTA
CTCTCGCACTGAGGAGGACGTGGCCGAGAATCTCTACGTCTTCTTGCAGG
GCTTCTACGCCATGTACCCGGAGCTGCTGGATGGCGGGCTCTACATCATG
GGCGAGAGCTATGCGGGCCACTACATCCCATCCCTCGCTACCTACCTCCT
GCGCCGCAATGACGACATTCCTCTCCCCACCTCCTCCCCTACGACCTCCC
CCTCTACCTCCCCCTCTACCTCCCCCTCTACCTCCCCCTCTACCTCCCCC
ATGGCCCCTCCCACCGCCTCCCCCTCTACCTCCCCCTCTACCTCCCCCTC
TACCTCCCCTATCGCCCCTCCCACCGCACTTCCCACCTCATCACCTTTTC
CCCCCGTTTCCTCCTCCTCCTTGCATCTGCGTGGTGCAAGTTCTGCGGTG
ATGCGGGAAGAAAAAAGCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCGGTCTACATTCCTC
TCAAGGGTATTGCCATCGGAAACGGCCTCACCAACCCCGCCCTCCAGGTG
ATGGCTAAGGCCCGCGTCGCCTACGACATGGGCTTGCTCAACGGAAAGGA
GGTCCGTCTAACCCTTCCTCGCCCCCTCCCTCCACCTCCTAGAATAATAC
GCCCTCCCTCCCTCACTCCTTCCCTCCCTCCCTGGCAGTTCCTCCAAGCG
CGCGCCTACGCCCTCTATGCAGCCTTGTCGGCCCTCGACGGCGACTACCT
GACTGCCCGCGAGTACAGAGGCTTGCTCGAGGACTACATCGCCTCGACCT
CCGGTGTGAACCTCTACGACGCCCGCCTCCTGTCCCCCTACTCCTTCGAA
CCCGAGATTCAAACATGGGCCAACACCCCCCAGGCCAAGCGGGCCCTGCA
CTTGCCCCTGAATGCCACGTGGAAGACCAGCGAGGAGTATGAAGCAGCAG
CGGGCGAGTCTTTGAACGAAGATCTGATGGTTTCGTACGCCAAGGAGGTG
GCTCTTATCCTCGACCACTACCGCGTGCCTGTCCTTCTCTACCAAGGACA
ATTCGACGTCAAAGATGGCCCTATCAGCAATCAGGCCTGGATTCGAAATC
TCAAGTGGTCGGGCCAGAAGGGTTACCTGCAAGCAAACCGAACCCGCTGG
TACCTTCCCGAGGAGGACAACGAAGGAAGAGAGGGGGCCGAGAAGGCACC
ATTGCAAGTGGGATGGGTGCAGCGATACGATTTGCTTACCGAGGCAGTCG
TGGCGGGGGCGGGTCACCTAGTGCCCATGGACCAGCCAGTTGCTGCCCTC
GACATGATCACACGCTTTATTGAGGGCGAGGCGCCTTTTGCGCCTGAAGC
TGCCCCTGTCGTTGAAGAGAACGGGTTGGAGGGAGGGGAGGATGGAAGCG
GAGCAGTGCTGCTTGCATTAAACGAGGGGCTGGAGGACGCGGTGCGACAA
GAAATGTAA

Synonyms

Publications