NO05G03570.1, NO05G03570.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G03570.1
Unique Name	NO05G03570.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4461
Alignment location	chr5:940134..944594 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:940134..944594 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO05G03570.1 vs.
Match: EWM28060.1 (nxn protein [Nannochloropsis gaditana])

HSP 1 Score: 1969.9 bits (5102), Expect = 0.000e+0
Identity = 1021/1450 (70.41%), Postives = 1171/1450 (80.76%), Query Frame = 0

Query:   17 PVQQDKKKEIWNVATFALMCADPFLEGTELEVGHVAQAASVLGLLIHKLLTNRASRDRLILFGDADMRKLEEGMPLLKACIELSTAEVKDVGSFQEVLLKLVADIQALQLGQTLLVPGGWDGNAGSSTVVHLVERTSQEAYAFVTCNSGQGLTYHPSTPAEAPKIKYKTCLRLENIPEARMASIAFWATALSQWMKDRSDYHRMEVLYDVLLPWLVTSDSPPVTTTATAANGPTNPRLLLSEALIETQNDPAADWRTPGRAGSAPYKSLWEALRYHYRRQGLSDAHLKQLSYTLRLELLEKVQEDLGTLKNGEVVQPQRPYNEVLGTVRLVNAQQQQFGLDSLAGFYVGVFFGCNASASCSSFMRFLATTYERVRARAATATAAGAQVMPFCVLYVSQDRSGAEFWEFFR-SMPETWLAIPYPENALRAEVSHLFNASSVPTLIMVAPDGRVITAEGRARVLADPMGEHFPWSAPPI---PVAAMAGQGNEGEVAAPVEAAGQGPSISSKEAQLIRYCCRNVALRAVKENRDGRLGLEGLKGVREMVEFVEREVESLPLED-ETGTGDGCLPPCLAIEAECGTGVHEGDDRSSSY--VHALPGFDLLKGKGMEEYAGKAAAARQPQLANLLEVPESVSSPELAIAALMRCEGVVRRLLERARDGSSSSRLILQLQALHLIDAVFTQVMPLPKAPDAPDAATCIWRMGLSRDTQRRALTLVYSLLLTYATLWQAFDLPPRSAECERALVAAAALALFDRLLRTPALDDPLAVTAVMADDGGYYLASSVTQGSKSLEVLAARLELTRPEHTVARAQVLAYLTGVHKANRCPLFEMRQPAQVEFKKYGGSVSFLRRLLERCGYELIPRDNPDPPTEMEALMEWMLGDTTPLANEHPEYALTRDVVALYKFLSTMESREAELMRRRVSSEDNRYMSWSLSFDDEGGGMFAHSLHPTPLRWEVTNFRGTDKDTADVSIVGFGGRKLLWGEGMAVQSPADVGRLLPGLAMASEDDVLHAEKLPMFGDTLSREESETLLSYLTVEYIRIPLVVSFFASRDRHTYLFHPELQALLRSVLFEPGAWVAPYRHRPVTVVPVRRTTEQKRQDDLAHMMSAKRARQGEKEEGILATTPGLLLNELEHAPGGVLEPLLAMFQSITDLAKASVNSPEASYILYMLSLAVAIEGYVLHALKSITAVLARAAATSGAASEGNGGGGSDVGGAAAARQQTDSMRDSRLRVQEELRDYRNRLARFLHGPAAETLERWRVEAEGHQDMPTASVVLAFRALLWSNLQPEEYTPEAAAILLASLAYVHNWHGFGLGKVLAAGGGWGGVEGGDDEQRLMRFLQAYGVDTSHVRPGSLKGYLTGRPLFLRLGRQTIRAPVLGLDARTIATQRIPPADVPEYELLGTLQRQRRALVAYLQGIDGGERDAILTAVVREALRKPALEQTTWQAGIG 1460
            P  ++KKKEIWN+ATFALMCA+PF++ TELE+GHVAQ+AS+LG L++K++++R SR RL LF DADM  L +GM LL+ CIELSTAE+KD  +FQ++LLK+V  I+ +  G+TLL+PGGWDGNAG STVVHL+ER S ++YAFVTCN+GQGL YH S PAE+PK+KYKTCLRLENI  ARM S+AFWATALSQW+K RSDYHR+EVLYDVLLPWL++     +         P   RLLL +ALIET+NDPAADWRTP R GS PYKSLWE LRY+YRRQGLS A LKQLS+  R ELL KVQ DL +LKNGEVVQP+RPY+E+L    LVNA QQ FGL+ LAG YVGVFFG   S    SF RFLA TY+RVR+R  T  +      PF VLYVSQDR+G+EFW FFR +MP TWLAIP+ E ALR EV  LF  S +PTLI++ PDGRV+TAEGR RVLADP G  FPW  PP    P +      +EG      + A  GP+ISSKE QLIRY CR++ LRAVKENR GRLGLEGLK VREM+EFVEREV+SLPLED E  TGDGCLPP L  E  C     EG+  +++    +ALPGFDLLKG GME++AGKAA  R+PQLANLLEVPESVSSPELAIAALMRCE VVR LLERA+DGSSSSRLILQLQALH+IDA FTQV+P+PKAPDAPDAATCIWR+ LSRDTQRRALTLVYSLLLT+ATLWQA DLPPR+AECERALVA AALAL+DR+LRT A D  LAVTAV+ +DGGYYL+S+VT+G+K  + LAARLEL RPEHTV R+Q+LAYLTG  K NRCPLFE+RQPAQVE KKYG +++FLRRLLERCGYELIPRD P+PP+EMEALMEWMLGD T LANEHPE+ALTRDVVALYKFL+TMESREAELMRRRVS+E+NRYMSWSLSFDDEGGG FAHSLHPT LRWEVTNFRG DKDTADV+I GFGGRKL WGEG A+QSPADV R+LPGL  ASEDD+LH+EKLP FGDTLSREESETLLSYLTVEYIRIPLVVSFFASRDRHTYLF+ +LQALLR+VLFEPGAW+ P  H+PVT+VPVRRT EQKRQ+D+A+M++AKRARQGEKE GILATTPGL LNEL+HAP GVL PLLAMF SI+D+AKA V+SPEASYI Y++SLAVA E YV++AL+  TA    A  T  A   G+   GSD                  ++V +EL+ YR++L  FL GPAAE LERWRVEAE +QDM TASVVL +RALLWSNL  +EYTP+AAA LLASLAYVHNWHGFGLGK+ A G G  G +  +DE+RL+RFLQAYGVDTSHVRPGSLK YL GRPLFLRL  QTIRAPV+G DA   A  + PPADVPEYELL  LQ+QRR LVAYLQG+   ERD +LT VV+EALRKPAL +T W  G G
Sbjct:   35 PPGREKKKEIWNMATFALMCAEPFIDNTELEMGHVAQSASLLGFLLNKMISDRRSRGRLDLFRDADMLILGKGMRLLEPCIELSTAEIKDTSAFQDLLLKVVKGIEDMAPGETLLLPGGWDGNAGGSTVVHLIERQSIDSYAFVTCNAGQGLAYHVSAPAESPKMKYKTCLRLENIASARMTSMAFWATALSQWVKARSDYHRVEVLYDVLLPWLISDSPAALEGGIPVYRTPPPRRLLLPQALIETRNDPAADWRTPARTGSTPYKSLWEGLRYYYRRQGLSHAQLKQLSFLFRQELLIKVQADLNSLKNGEVVQPERPYHEILSGACLVNAAQQHFGLEHLAGHYVGVFFGSKESTDSVSFARFLAETYDRVRSRTDTGASVLPGAGPFSVLYVSQDRTGSEFWSFFREAMPPTWLAIPHQETALRTEVQRLFGVSILPTLIVIGPDGRVVTAEGRVRVLADPAGTQFPWRNPPALERPDSTDMEGTSEGPQDKGADMAAVGPTISSKEVQLIRYGCRDLGLRAVKENRAGRLGLEGLKRVREMIEFVEREVQSLPLEDDEAATGDGCLPPRLGAEVIC-----EGEKNATTLHKPYALPGFDLLKGSGMEDFAGKAAGIRRPQLANLLEVPESVSSPELAIAALMRCEAVVRSLLERAQDGSSSSRLILQLQALHMIDATFTQVLPVPKAPDAPDAATCIWRLRLSRDTQRRALTLVYSLLLTFATLWQAVDLPPRAAECERALVATAALALYDRILRTAAFDTQLAVTAVLEEDGGYYLSSAVTRGNKPFDTLAARLELVRPEHTVVRSQLLAYLTGTQKMNRCPLFELRQPAQVEIKKYGSTLTFLRRLLERCGYELIPRDTPEPPSEMEALMEWMLGDATALANEHPEFALTRDVVALYKFLATMESREAELMRRRVSTEENRYMSWSLSFDDEGGGRFAHSLHPTALRWEVTNFRGLDKDTADVNISGFGGRKLQWGEGAAIQSPADVARILPGLTSASEDDILHSEKLPTFGDTLSREESETLLSYLTVEYIRIPLVVSFFASRDRHTYLFNQDLQALLRAVLFEPGAWIPPSGHQPVTLVPVRRTAEQKRQNDIANMLNAKRARQGEKEGGILATTPGLFLNELKHAPKGVLGPLLAMFHSISDMAKAPVDSPEASYIFYIISLAVATEAYVIYALRMATAP-GHAFLTLNA---GDFRLGSD---------------HWIVQVHKELQAYRHQLTCFLQGPAAEILERWRVEAERNQDMATASVVLGYRALLWSNLLADEYTPKAAATLLASLAYVHNWHGFGLGKLAARGDGLHG-DTANDERRLLRFLQAYGVDTSHVRPGSLKRYLRGRPLFLRLHGQTIRAPVMGFDADANAVNKSPPADVPEYELLSVLQKQRRNLVAYLQGMCEMERDVLLTIVVKEALRKPALTETRWHIGAG 1459

The following BLAST results are available for this feature:

BLAST of NO05G03570.1 vs.

BLAST of NO05G03570.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28060.1	0.000e+0	70.41	nxn protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G03570	NO05G03570	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G03570.1	NO05G03570.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G03570.1.cds1	NO05G03570.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:940134..944594-
coding sequence from alignment at chr5:940134..944594-

mRNA sequence

>NO05G03570.1 ID=NO05G03570.1|Name=NO05G03570.1|organism=Nannochloropsis oceanica|type=mRNA|length=4461bp
ATGGCCGTACGCGATGGCCCTCCAGCAGGTGGGAATGATGTCACATTTCC
CGTCCAACAGGACAAGAAGAAGGAAATCTGGAACGTGGCGACTTTTGCGC
TCATGTGTGCGGACCCGTTTCTTGAGGGGACGGAGCTGGAAGTAGGGCAC
GTGGCGCAAGCTGCTTCGGTGCTTGGCCTTCTGATCCACAAGCTTTTGAC
AAACCGTGCAAGTCGAGATCGTCTGATCCTCTTTGGGGACGCAGACATGC
GAAAATTGGAGGAAGGCATGCCGTTGCTCAAGGCGTGCATCGAGCTGAGC
ACTGCGGAGGTCAAGGATGTGGGCAGCTTTCAAGAGGTCTTGTTGAAGCT
CGTGGCGGACATTCAGGCCTTGCAACTGGGCCAGACACTACTCGTGCCAG
GAGGGTGGGATGGTAATGCGGGTAGCTCGACTGTAGTGCATTTGGTGGAA
CGAACCTCGCAGGAGGCCTACGCCTTTGTTACGTGTAACTCGGGCCAAGG
CCTGACATATCACCCGAGCACCCCTGCGGAAGCCCCAAAGATAAAGTATA
AGACCTGTTTAAGACTAGAAAATATTCCGGAGGCACGCATGGCATCAATT
GCATTTTGGGCCACCGCGTTGTCTCAATGGATGAAGGACCGTTCTGACTA
TCATCGGATGGAAGTCCTCTACGATGTGCTCCTCCCCTGGCTCGTCACCA
GCGATTCTCCCCCTGTAACCACTACAGCCACTGCTGCTAATGGCCCAACG
AATCCTCGTCTTCTCCTCTCCGAAGCCCTAATCGAGACGCAAAACGACCC
CGCGGCCGATTGGCGGACGCCCGGACGGGCAGGGAGTGCGCCATACAAAT
CGTTGTGGGAGGCGCTAAGGTATCACTATCGACGACAGGGGCTGTCCGAT
GCTCACTTAAAACAACTAAGTTACACTTTAAGGCTGGAGCTGCTGGAAAA
AGTGCAGGAAGATTTGGGAACGTTGAAGAATGGGGAGGTGGTTCAGCCAC
AGCGGCCGTACAACGAGGTGTTAGGAACGGTAAGGCTTGTCAATGCACAG
CAGCAGCAGTTTGGGTTAGACTCTCTGGCAGGCTTTTATGTCGGAGTGTT
CTTTGGATGTAATGCCTCGGCGTCCTGCTCTTCCTTCATGCGTTTTCTTG
CCACGACCTACGAACGTGTTCGGGCACGGGCCGCTACTGCTACTGCTGCA
GGCGCTCAAGTCATGCCGTTTTGTGTGTTGTACGTGAGCCAAGATCGGTC
AGGAGCGGAGTTTTGGGAATTCTTCAGGAGCATGCCGGAGACGTGGTTGG
CGATTCCTTACCCTGAGAATGCGTTGAGGGCGGAGGTAAGTCATTTGTTC
AATGCGAGCAGTGTGCCTACTTTGATCATGGTGGCTCCAGATGGGAGGGT
GATCACTGCAGAAGGGCGTGCACGGGTGCTAGCGGACCCGATGGGGGAGC
ATTTTCCCTGGAGCGCGCCACCTATTCCAGTCGCTGCTATGGCTGGACAG
GGGAATGAAGGAGAAGTAGCAGCACCAGTAGAGGCAGCAGGACAAGGGCC
CTCGATAAGCAGCAAGGAAGCACAATTAATTCGGTATTGCTGTCGGAATG
TTGCCTTGCGCGCCGTGAAGGAAAATAGAGATGGGAGGTTGGGATTGGAG
GGGTTGAAGGGGGTGAGGGAGATGGTGGAATTTGTAGAGCGGGAGGTGGA
GAGTTTGCCTTTGGAAGACGAGACCGGCACGGGTGATGGCTGCTTGCCGC
CTTGCTTGGCGATAGAGGCCGAGTGTGGGACTGGTGTTCATGAGGGTGAT
GATAGATCTTCCTCCTATGTGCATGCCTTGCCGGGCTTTGATCTGTTGAA
AGGAAAGGGGATGGAGGAGTATGCAGGGAAGGCTGCTGCTGCCCGTCAGC
CTCAGCTGGCTAATCTATTAGAGGTCCCTGAGAGCGTGTCATCGCCCGAG
CTGGCAATCGCGGCGTTGATGCGCTGCGAAGGGGTAGTGCGCCGGTTGTT
GGAACGGGCAAGGGATGGTTCCTCGTCGTCTCGTCTGATTCTGCAGTTGC
AAGCGCTTCATTTGATAGACGCGGTGTTCACGCAAGTGATGCCCTTGCCC
AAGGCTCCAGACGCCCCGGACGCCGCCACGTGCATATGGCGGATGGGCCT
TTCGCGGGACACACAACGGCGAGCGCTCACCCTGGTTTACTCTCTCCTTT
TAACCTATGCGACGCTTTGGCAAGCTTTCGACCTTCCTCCTCGCTCTGCG
GAGTGTGAGCGGGCCTTGGTGGCTGCGGCAGCATTGGCGCTCTTCGATCG
GTTGTTGCGGACCCCAGCTTTGGATGATCCTCTGGCAGTAACCGCGGTAA
TGGCGGACGATGGTGGGTATTATCTCGCTAGCTCTGTCACCCAGGGGAGC
AAGAGCTTGGAGGTGCTCGCGGCCCGGTTGGAGCTCACTCGACCTGAGCA
CACGGTGGCGAGGGCGCAGGTTTTGGCGTATCTGACGGGGGTACATAAGG
CAAATCGATGTCCGTTGTTTGAAATGCGGCAGCCGGCGCAGGTGGAGTTC
AAGAAATACGGGGGGAGCGTGTCTTTTCTTCGAAGATTGTTGGAGAGGTG
TGGTTATGAGTTGATTCCACGAGATAATCCTGACCCGCCTACTGAGATGG
AAGCACTGATGGAATGGATGCTTGGTGATACGACCCCGTTGGCGAACGAG
CACCCGGAATATGCCTTGACAAGGGACGTGGTTGCACTGTACAAGTTTTT
GTCAACGATGGAGAGTCGGGAAGCGGAGTTGATGCGACGGAGAGTGAGTT
CGGAGGATAACCGATATATGTCTTGGTCCTTGTCCTTTGATGATGAGGGA
GGGGGAATGTTCGCCCACTCTTTGCACCCGACGCCGCTGAGGTGGGAAGT
GACGAATTTTAGGGGTACGGATAAAGATACGGCGGACGTGAGTATTGTTG
GATTTGGTGGACGGAAGTTGCTGTGGGGGGAGGGGATGGCGGTGCAGAGT
CCAGCGGATGTGGGAAGGTTGTTGCCAGGGTTGGCAATGGCCAGTGAGGA
CGACGTATTGCATGCGGAGAAGCTGCCGATGTTCGGGGATACTCTGAGTA
GGGAGGAATCGGAGACCTTGCTTTCGTATCTGACAGTGGAATATATCCGA
ATCCCCCTCGTGGTCAGCTTTTTCGCCTCGCGCGATCGACATACCTATCT
TTTTCACCCTGAGCTGCAGGCGCTGTTGCGGTCTGTGCTCTTCGAGCCAG
GCGCATGGGTTGCACCTTACAGACATCGACCTGTGACTGTTGTCCCTGTC
CGACGGACGACAGAGCAGAAGCGACAAGATGATCTTGCGCACATGATGAG
TGCAAAGCGGGCTCGACAAGGGGAAAAGGAGGAAGGGATTCTTGCCACCA
CCCCTGGGTTGTTGCTTAATGAGTTGGAGCATGCGCCCGGTGGAGTACTT
GAGCCGCTGTTGGCCATGTTTCAGTCAATTACTGACCTAGCCAAGGCCTC
GGTAAACTCTCCCGAAGCTTCTTACATCCTTTACATGCTCAGCCTAGCCG
TTGCTATTGAGGGGTATGTCTTACATGCCCTAAAGTCGATAACTGCGGTT
CTAGCAAGAGCAGCAGCAACATCAGGAGCAGCGTCGGAAGGAAATGGTGG
TGGTGGTAGTGATGTTGGTGGTGCTGCTGCTGCTCGACAGCAGACGGATA
GCATGAGAGATTCAAGGCTGCGGGTGCAGGAGGAACTGAGAGATTACCGC
AATCGTTTGGCTCGTTTTTTGCACGGCCCGGCTGCAGAGACGCTCGAGAG
GTGGAGAGTGGAGGCGGAGGGGCATCAGGACATGCCCACAGCGTCGGTTG
TCTTGGCATTTCGGGCGTTGCTTTGGTCAAATCTGCAGCCGGAGGAGTAT
ACACCGGAAGCGGCTGCGATCCTGCTGGCTTCCTTGGCATATGTTCATAA
TTGGCATGGATTTGGGCTGGGAAAGGTGCTTGCAGCAGGTGGAGGATGGG
GAGGGGTGGAAGGAGGGGATGATGAGCAGAGATTGATGCGGTTTTTGCAA
GCGTATGGAGTGGACACGTCGCATGTTCGCCCGGGGAGTTTAAAGGGATA
TTTAACGGGGCGGCCATTGTTTTTGAGGTTGGGGAGGCAGACGATAAGGG
CCCCAGTGTTGGGTTTGGATGCTCGGACGATTGCCACTCAACGAATCCCG
CCGGCAGATGTGCCTGAGTATGAGTTGCTGGGGACTTTGCAAAGGCAACG
ACGGGCCCTGGTCGCATATCTTCAAGGAATAGATGGAGGAGAACGAGATG
CCATCCTGACGGCTGTGGTGAGGGAGGCATTGCGAAAACCAGCCTTGGAG
CAAACGACCTGGCAGGCGGGGATTGGTGGGGAGGGAGACCACCACCACCA
CCAGCAGCAGCAGGGGGGGGAGGTATGCCTGGACAGTATCACGCATCGGA
GGAGGAATTGA

protein sequence of NO05G03570.1

>NO05G03570.1-protein ID=NO05G03570.1-protein|Name=NO05G03570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1487bp
MAVRDGPPAGGNDVTFPVQQDKKKEIWNVATFALMCADPFLEGTELEVGH
VAQAASVLGLLIHKLLTNRASRDRLILFGDADMRKLEEGMPLLKACIELS
TAEVKDVGSFQEVLLKLVADIQALQLGQTLLVPGGWDGNAGSSTVVHLVE
RTSQEAYAFVTCNSGQGLTYHPSTPAEAPKIKYKTCLRLENIPEARMASI
AFWATALSQWMKDRSDYHRMEVLYDVLLPWLVTSDSPPVTTTATAANGPT
NPRLLLSEALIETQNDPAADWRTPGRAGSAPYKSLWEALRYHYRRQGLSD
AHLKQLSYTLRLELLEKVQEDLGTLKNGEVVQPQRPYNEVLGTVRLVNAQ
QQQFGLDSLAGFYVGVFFGCNASASCSSFMRFLATTYERVRARAATATAA
GAQVMPFCVLYVSQDRSGAEFWEFFRSMPETWLAIPYPENALRAEVSHLF
NASSVPTLIMVAPDGRVITAEGRARVLADPMGEHFPWSAPPIPVAAMAGQ
GNEGEVAAPVEAAGQGPSISSKEAQLIRYCCRNVALRAVKENRDGRLGLE
GLKGVREMVEFVEREVESLPLEDETGTGDGCLPPCLAIEAECGTGVHEGD
DRSSSYVHALPGFDLLKGKGMEEYAGKAAAARQPQLANLLEVPESVSSPE
LAIAALMRCEGVVRRLLERARDGSSSSRLILQLQALHLIDAVFTQVMPLP
KAPDAPDAATCIWRMGLSRDTQRRALTLVYSLLLTYATLWQAFDLPPRSA
ECERALVAAAALALFDRLLRTPALDDPLAVTAVMADDGGYYLASSVTQGS
KSLEVLAARLELTRPEHTVARAQVLAYLTGVHKANRCPLFEMRQPAQVEF
KKYGGSVSFLRRLLERCGYELIPRDNPDPPTEMEALMEWMLGDTTPLANE
HPEYALTRDVVALYKFLSTMESREAELMRRRVSSEDNRYMSWSLSFDDEG
GGMFAHSLHPTPLRWEVTNFRGTDKDTADVSIVGFGGRKLLWGEGMAVQS
PADVGRLLPGLAMASEDDVLHAEKLPMFGDTLSREESETLLSYLTVEYIR
IPLVVSFFASRDRHTYLFHPELQALLRSVLFEPGAWVAPYRHRPVTVVPV
RRTTEQKRQDDLAHMMSAKRARQGEKEEGILATTPGLLLNELEHAPGGVL
EPLLAMFQSITDLAKASVNSPEASYILYMLSLAVAIEGYVLHALKSITAV
LARAAATSGAASEGNGGGGSDVGGAAAARQQTDSMRDSRLRVQEELRDYR
NRLARFLHGPAAETLERWRVEAEGHQDMPTASVVLAFRALLWSNLQPEEY
TPEAAAILLASLAYVHNWHGFGLGKVLAAGGGWGGVEGGDDEQRLMRFLQ
AYGVDTSHVRPGSLKGYLTGRPLFLRLGRQTIRAPVLGLDARTIATQRIP
PADVPEYELLGTLQRQRRALVAYLQGIDGGERDAILTAVVREALRKPALE
QTTWQAGIGGEGDHHHHQQQQGGEVCLDSITHRRRN*

mRNA from alignment at chr5:940134..944594-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G03570.1 ID=NO05G03570.1|Name=NO05G03570.1|organism=Nannochloropsis oceanica|type=mRNA|length=4461bp|location=Sequence derived from alignment at chr5:940134..944594- (Nannochloropsis oceanica)
ATGGCCGTACGCGATGGCCCTCCAGCAGGTGGGAATGATGTCACATTTCC
CGTCCAACAGGACAAGAAGAAGGAAATCTGGAACGTGGCGACTTTTGCGC
TCATGTGTGCGGACCCGTTTCTTGAGGGGACGGAGCTGGAAGTAGGGCAC
GTGGCGCAAGCTGCTTCGGTGCTTGGCCTTCTGATCCACAAGCTTTTGAC
AAACCGTGCAAGTCGAGATCGTCTGATCCTCTTTGGGGACGCAGACATGC
GAAAATTGGAGGAAGGCATGCCGTTGCTCAAGGCGTGCATCGAGCTGAGC
ACTGCGGAGGTCAAGGATGTGGGCAGCTTTCAAGAGGTCTTGTTGAAGCT
CGTGGCGGACATTCAGGCCTTGCAACTGGGCCAGACACTACTCGTGCCAG
GAGGGTGGGATGGTAATGCGGGTAGCTCGACTGTAGTGCATTTGGTGGAA
CGAACCTCGCAGGAGGCCTACGCCTTTGTTACGTGTAACTCGGGCCAAGG
CCTGACATATCACCCGAGCACCCCTGCGGAAGCCCCAAAGATAAAGTATA
AGACCTGTTTAAGACTAGAAAATATTCCGGAGGCACGCATGGCATCAATT
GCATTTTGGGCCACCGCGTTGTCTCAATGGATGAAGGACCGTTCTGACTA
TCATCGGATGGAAGTCCTCTACGATGTGCTCCTCCCCTGGCTCGTCACCA
GCGATTCTCCCCCTGTAACCACTACAGCCACTGCTGCTAATGGCCCAACG
AATCCTCGTCTTCTCCTCTCCGAAGCCCTAATCGAGACGCAAAACGACCC
CGCGGCCGATTGGCGGACGCCCGGACGGGCAGGGAGTGCGCCATACAAAT
CGTTGTGGGAGGCGCTAAGGTATCACTATCGACGACAGGGGCTGTCCGAT
GCTCACTTAAAACAACTAAGTTACACTTTAAGGCTGGAGCTGCTGGAAAA
AGTGCAGGAAGATTTGGGAACGTTGAAGAATGGGGAGGTGGTTCAGCCAC
AGCGGCCGTACAACGAGGTGTTAGGAACGGTAAGGCTTGTCAATGCACAG
CAGCAGCAGTTTGGGTTAGACTCTCTGGCAGGCTTTTATGTCGGAGTGTT
CTTTGGATGTAATGCCTCGGCGTCCTGCTCTTCCTTCATGCGTTTTCTTG
CCACGACCTACGAACGTGTTCGGGCACGGGCCGCTACTGCTACTGCTGCA
GGCGCTCAAGTCATGCCGTTTTGTGTGTTGTACGTGAGCCAAGATCGGTC
AGGAGCGGAGTTTTGGGAATTCTTCAGGAGCATGCCGGAGACGTGGTTGG
CGATTCCTTACCCTGAGAATGCGTTGAGGGCGGAGGTAAGTCATTTGTTC
AATGCGAGCAGTGTGCCTACTTTGATCATGGTGGCTCCAGATGGGAGGGT
GATCACTGCAGAAGGGCGTGCACGGGTGCTAGCGGACCCGATGGGGGAGC
ATTTTCCCTGGAGCGCGCCACCTATTCCAGTCGCTGCTATGGCTGGACAG
GGGAATGAAGGAGAAGTAGCAGCACCAGTAGAGGCAGCAGGACAAGGGCC
CTCGATAAGCAGCAAGGAAGCACAATTAATTCGGTATTGCTGTCGGAATG
TTGCCTTGCGCGCCGTGAAGGAAAATAGAGATGGGAGGTTGGGATTGGAG
GGGTTGAAGGGGGTGAGGGAGATGGTGGAATTTGTAGAGCGGGAGGTGGA
GAGTTTGCCTTTGGAAGACGAGACCGGCACGGGTGATGGCTGCTTGCCGC
CTTGCTTGGCGATAGAGGCCGAGTGTGGGACTGGTGTTCATGAGGGTGAT
GATAGATCTTCCTCCTATGTGCATGCCTTGCCGGGCTTTGATCTGTTGAA
AGGAAAGGGGATGGAGGAGTATGCAGGGAAGGCTGCTGCTGCCCGTCAGC
CTCAGCTGGCTAATCTATTAGAGGTCCCTGAGAGCGTGTCATCGCCCGAG
CTGGCAATCGCGGCGTTGATGCGCTGCGAAGGGGTAGTGCGCCGGTTGTT
GGAACGGGCAAGGGATGGTTCCTCGTCGTCTCGTCTGATTCTGCAGTTGC
AAGCGCTTCATTTGATAGACGCGGTGTTCACGCAAGTGATGCCCTTGCCC
AAGGCTCCAGACGCCCCGGACGCCGCCACGTGCATATGGCGGATGGGCCT
TTCGCGGGACACACAACGGCGAGCGCTCACCCTGGTTTACTCTCTCCTTT
TAACCTATGCGACGCTTTGGCAAGCTTTCGACCTTCCTCCTCGCTCTGCG
GAGTGTGAGCGGGCCTTGGTGGCTGCGGCAGCATTGGCGCTCTTCGATCG
GTTGTTGCGGACCCCAGCTTTGGATGATCCTCTGGCAGTAACCGCGGTAA
TGGCGGACGATGGTGGGTATTATCTCGCTAGCTCTGTCACCCAGGGGAGC
AAGAGCTTGGAGGTGCTCGCGGCCCGGTTGGAGCTCACTCGACCTGAGCA
CACGGTGGCGAGGGCGCAGGTTTTGGCGTATCTGACGGGGGTACATAAGG
CAAATCGATGTCCGTTGTTTGAAATGCGGCAGCCGGCGCAGGTGGAGTTC
AAGAAATACGGGGGGAGCGTGTCTTTTCTTCGAAGATTGTTGGAGAGGTG
TGGTTATGAGTTGATTCCACGAGATAATCCTGACCCGCCTACTGAGATGG
AAGCACTGATGGAATGGATGCTTGGTGATACGACCCCGTTGGCGAACGAG
CACCCGGAATATGCCTTGACAAGGGACGTGGTTGCACTGTACAAGTTTTT
GTCAACGATGGAGAGTCGGGAAGCGGAGTTGATGCGACGGAGAGTGAGTT
CGGAGGATAACCGATATATGTCTTGGTCCTTGTCCTTTGATGATGAGGGA
GGGGGAATGTTCGCCCACTCTTTGCACCCGACGCCGCTGAGGTGGGAAGT
GACGAATTTTAGGGGTACGGATAAAGATACGGCGGACGTGAGTATTGTTG
GATTTGGTGGACGGAAGTTGCTGTGGGGGGAGGGGATGGCGGTGCAGAGT
CCAGCGGATGTGGGAAGGTTGTTGCCAGGGTTGGCAATGGCCAGTGAGGA
CGACGTATTGCATGCGGAGAAGCTGCCGATGTTCGGGGATACTCTGAGTA
GGGAGGAATCGGAGACCTTGCTTTCGTATCTGACAGTGGAATATATCCGA
ATCCCCCTCGTGGTCAGCTTTTTCGCCTCGCGCGATCGACATACCTATCT
TTTTCACCCTGAGCTGCAGGCGCTGTTGCGGTCTGTGCTCTTCGAGCCAG
GCGCATGGGTTGCACCTTACAGACATCGACCTGTGACTGTTGTCCCTGTC
CGACGGACGACAGAGCAGAAGCGACAAGATGATCTTGCGCACATGATGAG
TGCAAAGCGGGCTCGACAAGGGGAAAAGGAGGAAGGGATTCTTGCCACCA
CCCCTGGGTTGTTGCTTAATGAGTTGGAGCATGCGCCCGGTGGAGTACTT
GAGCCGCTGTTGGCCATGTTTCAGTCAATTACTGACCTAGCCAAGGCCTC
GGTAAACTCTCCCGAAGCTTCTTACATCCTTTACATGCTCAGCCTAGCCG
TTGCTATTGAGGGGTATGTCTTACATGCCCTAAAGTCGATAACTGCGGTT
CTAGCAAGAGCAGCAGCAACATCAGGAGCAGCGTCGGAAGGAAATGGTGG
TGGTGGTAGTGATGTTGGTGGTGCTGCTGCTGCTCGACAGCAGACGGATA
GCATGAGAGATTCAAGGCTGCGGGTGCAGGAGGAACTGAGAGATTACCGC
AATCGTTTGGCTCGTTTTTTGCACGGCCCGGCTGCAGAGACGCTCGAGAG
GTGGAGAGTGGAGGCGGAGGGGCATCAGGACATGCCCACAGCGTCGGTTG
TCTTGGCATTTCGGGCGTTGCTTTGGTCAAATCTGCAGCCGGAGGAGTAT
ACACCGGAAGCGGCTGCGATCCTGCTGGCTTCCTTGGCATATGTTCATAA
TTGGCATGGATTTGGGCTGGGAAAGGTGCTTGCAGCAGGTGGAGGATGGG
GAGGGGTGGAAGGAGGGGATGATGAGCAGAGATTGATGCGGTTTTTGCAA
GCGTATGGAGTGGACACGTCGCATGTTCGCCCGGGGAGTTTAAAGGGATA
TTTAACGGGGCGGCCATTGTTTTTGAGGTTGGGGAGGCAGACGATAAGGG
CCCCAGTGTTGGGTTTGGATGCTCGGACGATTGCCACTCAACGAATCCCG
CCGGCAGATGTGCCTGAGTATGAGTTGCTGGGGACTTTGCAAAGGCAACG
ACGGGCCCTGGTCGCATATCTTCAAGGAATAGATGGAGGAGAACGAGATG
CCATCCTGACGGCTGTGGTGAGGGAGGCATTGCGAAAACCAGCCTTGGAG
CAAACGACCTGGCAGGCGGGGATTGGTGGGGAGGGAGACCACCACCACCA
CCAGCAGCAGCAGGGGGGGGAGGTATGCCTGGACAGTATCACGCATCGGA
GGAGGAATTGA

Coding sequence (CDS) from alignment at chr5:940134..944594-

>NO05G03570.1 ID=NO05G03570.1|Name=NO05G03570.1|organism=Nannochloropsis oceanica|type=CDS|length=4461bp|location=Sequence derived from alignment at chr5:940134..944594- (Nannochloropsis oceanica)
ATGGCCGTACGCGATGGCCCTCCAGCAGGTGGGAATGATGTCACATTTCC
CGTCCAACAGGACAAGAAGAAGGAAATCTGGAACGTGGCGACTTTTGCGC
TCATGTGTGCGGACCCGTTTCTTGAGGGGACGGAGCTGGAAGTAGGGCAC
GTGGCGCAAGCTGCTTCGGTGCTTGGCCTTCTGATCCACAAGCTTTTGAC
AAACCGTGCAAGTCGAGATCGTCTGATCCTCTTTGGGGACGCAGACATGC
GAAAATTGGAGGAAGGCATGCCGTTGCTCAAGGCGTGCATCGAGCTGAGC
ACTGCGGAGGTCAAGGATGTGGGCAGCTTTCAAGAGGTCTTGTTGAAGCT
CGTGGCGGACATTCAGGCCTTGCAACTGGGCCAGACACTACTCGTGCCAG
GAGGGTGGGATGGTAATGCGGGTAGCTCGACTGTAGTGCATTTGGTGGAA
CGAACCTCGCAGGAGGCCTACGCCTTTGTTACGTGTAACTCGGGCCAAGG
CCTGACATATCACCCGAGCACCCCTGCGGAAGCCCCAAAGATAAAGTATA
AGACCTGTTTAAGACTAGAAAATATTCCGGAGGCACGCATGGCATCAATT
GCATTTTGGGCCACCGCGTTGTCTCAATGGATGAAGGACCGTTCTGACTA
TCATCGGATGGAAGTCCTCTACGATGTGCTCCTCCCCTGGCTCGTCACCA
GCGATTCTCCCCCTGTAACCACTACAGCCACTGCTGCTAATGGCCCAACG
AATCCTCGTCTTCTCCTCTCCGAAGCCCTAATCGAGACGCAAAACGACCC
CGCGGCCGATTGGCGGACGCCCGGACGGGCAGGGAGTGCGCCATACAAAT
CGTTGTGGGAGGCGCTAAGGTATCACTATCGACGACAGGGGCTGTCCGAT
GCTCACTTAAAACAACTAAGTTACACTTTAAGGCTGGAGCTGCTGGAAAA
AGTGCAGGAAGATTTGGGAACGTTGAAGAATGGGGAGGTGGTTCAGCCAC
AGCGGCCGTACAACGAGGTGTTAGGAACGGTAAGGCTTGTCAATGCACAG
CAGCAGCAGTTTGGGTTAGACTCTCTGGCAGGCTTTTATGTCGGAGTGTT
CTTTGGATGTAATGCCTCGGCGTCCTGCTCTTCCTTCATGCGTTTTCTTG
CCACGACCTACGAACGTGTTCGGGCACGGGCCGCTACTGCTACTGCTGCA
GGCGCTCAAGTCATGCCGTTTTGTGTGTTGTACGTGAGCCAAGATCGGTC
AGGAGCGGAGTTTTGGGAATTCTTCAGGAGCATGCCGGAGACGTGGTTGG
CGATTCCTTACCCTGAGAATGCGTTGAGGGCGGAGGTAAGTCATTTGTTC
AATGCGAGCAGTGTGCCTACTTTGATCATGGTGGCTCCAGATGGGAGGGT
GATCACTGCAGAAGGGCGTGCACGGGTGCTAGCGGACCCGATGGGGGAGC
ATTTTCCCTGGAGCGCGCCACCTATTCCAGTCGCTGCTATGGCTGGACAG
GGGAATGAAGGAGAAGTAGCAGCACCAGTAGAGGCAGCAGGACAAGGGCC
CTCGATAAGCAGCAAGGAAGCACAATTAATTCGGTATTGCTGTCGGAATG
TTGCCTTGCGCGCCGTGAAGGAAAATAGAGATGGGAGGTTGGGATTGGAG
GGGTTGAAGGGGGTGAGGGAGATGGTGGAATTTGTAGAGCGGGAGGTGGA
GAGTTTGCCTTTGGAAGACGAGACCGGCACGGGTGATGGCTGCTTGCCGC
CTTGCTTGGCGATAGAGGCCGAGTGTGGGACTGGTGTTCATGAGGGTGAT
GATAGATCTTCCTCCTATGTGCATGCCTTGCCGGGCTTTGATCTGTTGAA
AGGAAAGGGGATGGAGGAGTATGCAGGGAAGGCTGCTGCTGCCCGTCAGC
CTCAGCTGGCTAATCTATTAGAGGTCCCTGAGAGCGTGTCATCGCCCGAG
CTGGCAATCGCGGCGTTGATGCGCTGCGAAGGGGTAGTGCGCCGGTTGTT
GGAACGGGCAAGGGATGGTTCCTCGTCGTCTCGTCTGATTCTGCAGTTGC
AAGCGCTTCATTTGATAGACGCGGTGTTCACGCAAGTGATGCCCTTGCCC
AAGGCTCCAGACGCCCCGGACGCCGCCACGTGCATATGGCGGATGGGCCT
TTCGCGGGACACACAACGGCGAGCGCTCACCCTGGTTTACTCTCTCCTTT
TAACCTATGCGACGCTTTGGCAAGCTTTCGACCTTCCTCCTCGCTCTGCG
GAGTGTGAGCGGGCCTTGGTGGCTGCGGCAGCATTGGCGCTCTTCGATCG
GTTGTTGCGGACCCCAGCTTTGGATGATCCTCTGGCAGTAACCGCGGTAA
TGGCGGACGATGGTGGGTATTATCTCGCTAGCTCTGTCACCCAGGGGAGC
AAGAGCTTGGAGGTGCTCGCGGCCCGGTTGGAGCTCACTCGACCTGAGCA
CACGGTGGCGAGGGCGCAGGTTTTGGCGTATCTGACGGGGGTACATAAGG
CAAATCGATGTCCGTTGTTTGAAATGCGGCAGCCGGCGCAGGTGGAGTTC
AAGAAATACGGGGGGAGCGTGTCTTTTCTTCGAAGATTGTTGGAGAGGTG
TGGTTATGAGTTGATTCCACGAGATAATCCTGACCCGCCTACTGAGATGG
AAGCACTGATGGAATGGATGCTTGGTGATACGACCCCGTTGGCGAACGAG
CACCCGGAATATGCCTTGACAAGGGACGTGGTTGCACTGTACAAGTTTTT
GTCAACGATGGAGAGTCGGGAAGCGGAGTTGATGCGACGGAGAGTGAGTT
CGGAGGATAACCGATATATGTCTTGGTCCTTGTCCTTTGATGATGAGGGA
GGGGGAATGTTCGCCCACTCTTTGCACCCGACGCCGCTGAGGTGGGAAGT
GACGAATTTTAGGGGTACGGATAAAGATACGGCGGACGTGAGTATTGTTG
GATTTGGTGGACGGAAGTTGCTGTGGGGGGAGGGGATGGCGGTGCAGAGT
CCAGCGGATGTGGGAAGGTTGTTGCCAGGGTTGGCAATGGCCAGTGAGGA
CGACGTATTGCATGCGGAGAAGCTGCCGATGTTCGGGGATACTCTGAGTA
GGGAGGAATCGGAGACCTTGCTTTCGTATCTGACAGTGGAATATATCCGA
ATCCCCCTCGTGGTCAGCTTTTTCGCCTCGCGCGATCGACATACCTATCT
TTTTCACCCTGAGCTGCAGGCGCTGTTGCGGTCTGTGCTCTTCGAGCCAG
GCGCATGGGTTGCACCTTACAGACATCGACCTGTGACTGTTGTCCCTGTC
CGACGGACGACAGAGCAGAAGCGACAAGATGATCTTGCGCACATGATGAG
TGCAAAGCGGGCTCGACAAGGGGAAAAGGAGGAAGGGATTCTTGCCACCA
CCCCTGGGTTGTTGCTTAATGAGTTGGAGCATGCGCCCGGTGGAGTACTT
GAGCCGCTGTTGGCCATGTTTCAGTCAATTACTGACCTAGCCAAGGCCTC
GGTAAACTCTCCCGAAGCTTCTTACATCCTTTACATGCTCAGCCTAGCCG
TTGCTATTGAGGGGTATGTCTTACATGCCCTAAAGTCGATAACTGCGGTT
CTAGCAAGAGCAGCAGCAACATCAGGAGCAGCGTCGGAAGGAAATGGTGG
TGGTGGTAGTGATGTTGGTGGTGCTGCTGCTGCTCGACAGCAGACGGATA
GCATGAGAGATTCAAGGCTGCGGGTGCAGGAGGAACTGAGAGATTACCGC
AATCGTTTGGCTCGTTTTTTGCACGGCCCGGCTGCAGAGACGCTCGAGAG
GTGGAGAGTGGAGGCGGAGGGGCATCAGGACATGCCCACAGCGTCGGTTG
TCTTGGCATTTCGGGCGTTGCTTTGGTCAAATCTGCAGCCGGAGGAGTAT
ACACCGGAAGCGGCTGCGATCCTGCTGGCTTCCTTGGCATATGTTCATAA
TTGGCATGGATTTGGGCTGGGAAAGGTGCTTGCAGCAGGTGGAGGATGGG
GAGGGGTGGAAGGAGGGGATGATGAGCAGAGATTGATGCGGTTTTTGCAA
GCGTATGGAGTGGACACGTCGCATGTTCGCCCGGGGAGTTTAAAGGGATA
TTTAACGGGGCGGCCATTGTTTTTGAGGTTGGGGAGGCAGACGATAAGGG
CCCCAGTGTTGGGTTTGGATGCTCGGACGATTGCCACTCAACGAATCCCG
CCGGCAGATGTGCCTGAGTATGAGTTGCTGGGGACTTTGCAAAGGCAACG
ACGGGCCCTGGTCGCATATCTTCAAGGAATAGATGGAGGAGAACGAGATG
CCATCCTGACGGCTGTGGTGAGGGAGGCATTGCGAAAACCAGCCTTGGAG
CAAACGACCTGGCAGGCGGGGATTGGTGGGGAGGGAGACCACCACCACCA
CCAGCAGCAGCAGGGGGGGGAGGTATGCCTGGACAGTATCACGCATCGGA
GGAGGAATTGA

Synonyms

Publications