NO05G02190.1, NO05G02190.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G02190.1
Unique NameNO05G02190.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1665
Alignment locationchr5:585388..587747 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:585388..587747 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO05G02190.1 vs.
Match: EWM28172.1 (n-myristoyltransferase 2 [Nannochloropsis gaditana])

HSP 1 Score: 707.6 bits (1825), Expect = 2.600e-200
Identity = 353/441 (80.05%), Postives = 385/441 (87.30%), Query Frame = 0 
Query:   32 VAGNENDAAGGAKELQPRVGQGLTAGQLDMMLHAEQGMFRMQPQEKTQEDFKFWSTQPMLKLGEKREENGPIESDKTPEDVRQESYNLPAGFMWCEVDMTDVQEAKEVYDLLNQNYVEDDDNMFRFDYSPAFLEWALSPPGNAKEFVVGIRVAPTAAALAKGKGRGKLVGFITGVPVQMRVYDKIMPMVEINFLCVLKKLRSKRLAPVLIKEITRRVNLTGVWQAVYTAGVLLPKPVASCRYHHRLIRPKKLVEIGFTRLAPRMTMARTVRLYQLPETCTSGIRPMTLADVPSACELLNSYLNKFNLAPMMDDADFAHWLLPRHNVVDSFVVVNERGRVTDICSFYHLHSTVIGNTTYPTLNAVYSFYNVATSMPLKSLMKEALILAKQKDVDVVNALDLMDNQEFLKDLKFGPGDGTLHYYVYNWGCAEIESSKVGLVLL 473
            V G E   A   K L+   GQ LTA QL MMLHAE G+FRM  QEKTQE FKFWSTQP+L+L E R+ENGPIE+ KTP DVRQE YNLP GF WCEVDM D QEAKEVYDLLNQNYVEDDDNMFRF+YSPAFLEWAL+PPG+ K+FVVGIRV P+AAA+ KGK R KLVGFITGVPVQMRV+DK+MPMVEINFLCVLKKLRSKRLAPVLIKEITRRVNLTGVWQAVYTAGV+LP+PVA CRY+HRLIRPKKLVEIGFTRLAPRMTMART+RLYQLP+ C SGIRPMTLADVPSA +LLN+YL  F LAP+MDDAD AHWLLPR NVVDSFVV  E G VTD+CSFYHLHSTVI NT YP+LNAVYSFYNVAT+M L SLM+EALILAKQ+DVDV NALDLM+NQ FLK+LKFG GDG LHYY+YNWGCA+IE + VGLVLL
Sbjct:   33 VGGEEGGRAAKEKTLEMTAGQSLTAEQLKMMLHAEPGIFRMPFQEKTQEQFKFWSTQPVLRLDEDRKENGPIETGKTPADVRQEPYNLPEGFTWCEVDMRDGQEAKEVYDLLNQNYVEDDDNMFRFNYSPAFLEWALTPPGSQKDFVVGIRVDPSAAAVTKGKSRRKLVGFITGVPVQMRVHDKVMPMVEINFLCVLKKLRSKRLAPVLIKEITRRVNLTGVWQAVYTAGVVLPRPVARCRYYHRLIRPKKLVEIGFTRLAPRMTMARTIRLYQLPDVCASGIRPMTLADVPSARKLLNTYLEAFKLAPVMDDADLAHWLLPRPNVVDSFVVTKE-GCVTDMCSFYHLHSTVIDNTAYPSLNAVYSFYNVATTMSLTSLMREALILAKQRDVDVFNALDLMENQLFLKELKFGHGDGVLHYYLYNWGCADIEPAHVGLVLL 472
The following BLAST results are available for this feature:
BLAST of NO05G02190.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28172.12.600e-20080.05n-myristoyltransferase 2 [Nannochloropsis gaditana... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02190NO05G02190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G02190.1NO05G02190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G02190.1.cds1NO05G02190.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G02190.1.cds2NO05G02190.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G02190.1.cds3NO05G02190.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G02190.1.cds4NO05G02190.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G02190.1.cds5NO05G02190.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G02190.1.cds6NO05G02190.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G02190.1.cds7NO05G02190.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G02190.1 ID=NO05G02190.1|Name=NO05G02190.1|organism=Nannochloropsis oceanica|type=mRNA|length=1665bp
CAGGGTCAGGTGGGTTCCCGCTGAAGACTGGGGCGCGATCGATGGCGGAA
GAGAAAGTTTCACCACAGAAGACGCCAGATGAAGCACCAGCACCCGCAGA
GGCCGTGACGCATCAGCTTGCTGCCATGGGTATAGTTGCTGGGAATGAAA
ATGATGCTGCTGGAGGAGCCAAGGAGTTGCAGCCCAGAGTAGGTCAGGGT
TTGACAGCAGGACAGCTGGACATGATGCTGCACGCCGAGCAGGGTATGTT
TCGCATGCAGCCACAGGAGAAGACACAGGAAGACTTTAAGTTCTGGAGCA
CCCAACCAATGCTGAAACTAGGCGAGAAGCGCGAAGAAAATGGACCTATA
GAGTCGGACAAGACTCCAGAAGACGTGCGACAAGAGTCCTATAATCTACC
GGCGGGCTTCATGTGGTGCGAGGTGGACATGACGGACGTACAGGAGGCCA
AGGAGGTGTACGACCTCTTGAATCAGAATTATGTGGAGGACGACGACAAC
ATGTTCCGTTTTGACTATTCCCCTGCCTTTTTGGAATGGGCTTTGAGTCC
GCCAGGGAACGCGAAGGAGTTCGTGGTGGGCATCCGCGTCGCCCCAACCG
CGGCCGCGCTGGCCAAGGGGAAGGGACGGGGCAAGCTCGTTGGATTCATC
ACCGGTGTACCCGTGCAGATGCGTGTGTACGATAAAATCATGCCCATGGT
GGAAATCAACTTCTTGTGCGTGCTCAAGAAGTTGCGATCTAAGCGCTTGG
CACCTGTGCTCATCAAGGAGATAACCCGGCGGGTAAACCTGACTGGGGTG
TGGCAAGCGGTATACACTGCTGGTGTCCTCCTTCCAAAGCCGGTGGCAAG
CTGCAGGTATCACCATCGCCTCATCCGGCCCAAGAAGCTTGTAGAGATTG
GCTTTACGCGTCTGGCCCCGCGCATGACCATGGCCCGTACCGTCCGGCTG
TATCAGCTCCCTGAAACATGCACAAGCGGCATCCGACCGATGACGCTCGC
CGACGTACCCTCCGCGTGCGAATTGCTTAATTCTTACCTCAACAAATTCA
ACCTCGCACCCATGATGGACGACGCGGACTTCGCCCACTGGCTCTTGCCC
CGACATAATGTCGTGGACAGCTTTGTGGTAGTGAATGAGAGGGGCCGCGT
CACGGACATTTGCAGCTTCTACCATCTGCACTCTACGGTCATCGGCAACA
CCACCTATCCCACCCTTAACGCCGTCTACTCCTTTTACAACGTCGCCACA
TCCATGCCCCTAAAGTCTCTGATGAAGGAAGCTCTGATCCTGGCCAAGCA
GAAGGACGTGGACGTGGTCAATGCCTTAGACTTAATGGATAACCAAGAAT
TCCTCAAGGATCTCAAGTTCGGGCCCGGCGATGGCACACTCCACTACTAT
GTCTACAATTGGGGTTGTGCCGAGATTGAGTCGTCGAAAGTCGGCCTGGT
CCTTCTCTGAGAGAGATTGGAGGGGCGATGAGTGTTTGATGCGGCGGAAT
GCTGTGTAACGCACAAGTGATGGCCCTAAGCCTAACAGAGCATGGGAGAC
ATGAACAAGAAGAGGGCGGGAAAAGAAGAAGAGCAGGCCAAGCGAATGCT
CTATATTCAGAATGTATACCCGCAACTGCATCTAAAGCAAGCAAGAACGA
AGCGCGTACCAAAGG
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protein sequence of NO05G02190.1

>NO05G02190.1-protein ID=NO05G02190.1-protein|Name=NO05G02190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=473bp
MAEEKVSPQKTPDEAPAPAEAVTHQLAAMGIVAGNENDAAGGAKELQPRV
GQGLTAGQLDMMLHAEQGMFRMQPQEKTQEDFKFWSTQPMLKLGEKREEN
GPIESDKTPEDVRQESYNLPAGFMWCEVDMTDVQEAKEVYDLLNQNYVED
DDNMFRFDYSPAFLEWALSPPGNAKEFVVGIRVAPTAAALAKGKGRGKLV
GFITGVPVQMRVYDKIMPMVEINFLCVLKKLRSKRLAPVLIKEITRRVNL
TGVWQAVYTAGVLLPKPVASCRYHHRLIRPKKLVEIGFTRLAPRMTMART
VRLYQLPETCTSGIRPMTLADVPSACELLNSYLNKFNLAPMMDDADFAHW
LLPRHNVVDSFVVVNERGRVTDICSFYHLHSTVIGNTTYPTLNAVYSFYN
VATSMPLKSLMKEALILAKQKDVDVVNALDLMDNQEFLKDLKFGPGDGTL
HYYVYNWGCAEIESSKVGLVLL*
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mRNA from alignment at chr5:585388..587747+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G02190.1 ID=NO05G02190.1|Name=NO05G02190.1|organism=Nannochloropsis oceanica|type=mRNA|length=2360bp|location=Sequence derived from alignment at chr5:585388..587747+ (Nannochloropsis oceanica)
CAGGGTCAGGTGGGTTCCCGCTGAAGACTGGGGCGCGATCGATGGCGGAA
GAGAAAGTTTCACCACAGAAGACGCCAGATGAAGCACCAGCACCCGCAGA
GGCCGTGACGCATCAGCTTGCTGCCATGGGTATAGTTGCTGGGAATGAAA
ATGATGCTGCTGGAGGAGCCAAGGAGTTGCAGCCCAGAGTAGGTCAGGGT
TTGACAGCAGGACAGGTAAGCATTCTGGTGGAGCACAAAAGGAGTCCATG
AGATGTGTGCGAAGGAGACCTTCCACAAACGCCACATCTACACACATACA
GCTGGACATGATGCTGCACGCCGAGCAGGGTATGTTTCGCATGCAGCCAC
AGGAGAAGACACAGGAAGACTTTAAGTTCTGGAGCACCCAACCAATGCTG
AAACTAGGTACGAAACATGATGAGCGACATGCGTTAATCGAGGCTCTCCG
CCTATTGCTCACTTGCAATACATCATTTGAATCAAATAAGGCGAGAAGCG
CGAAGAAAATGGACCTATAGAGTCGGACAAGACTCCAGAAGACGTGCGAC
AAGAGTCCTATAATCTACCGGCGGGCTTCATGTGGTGCGAGGTGGACATG
ACGGACGTACAGGAGGCCAAGGAGGTGTACGACCTCTTGAATCAGAATTA
TGTGGAGGACGACGACAACATGTTCCGTTTTGACTATTCCCCTGCCTTTT
TGGAATGGGCTTTGAGTCCGCCAGGGAACGCGAAGGAGTTCGTGGTGGGC
ATCCGCGTCGCCCCAACCGCGGCCGCGCTGGCCAAGGGGAAGGGACGGGG
CAAGCTCGTTGGATTCATCACCGGTGTACCCGTGCAGATGCGTGTGTACG
ATAAAATCATGCCCATGGTGGAAATCAACTTCTTGTGCGTGCTCAAGAAG
TTGCGATCTAAGCGCTTGGCACCTGTGCTCATCAAGGAGATAACCCGGCG
GGTAAACCTGACTGGGGTAAGTGCGTATTTTGTGCGTCTCGCTCTCGTGC
GTTTTGGAAAAAGGCATTTTTATCCATGGGAAGCTATGAAGACTGTTGGC
CAATACAATGCTATGGATAAGGACTGCTATCCAAAATTCGCATGTTCAAA
TCTTTAACGTAGGTGTGGCAAGCGGTATACACTGCTGGTGTCCTCCTTCC
AAAGCCGGTGGCAAGCTGCAGGTATCACCATCGCCTCATCCGGCCCAAGA
AGCTTGTAGAGATTGGCTTTACGCGTCTGGCCCCGCGCATGACCATGGCC
CGTACCGTCCGGCTGTATCAGCTCCCTGAAACATGCACAAGCGGTACGTG
TATGAGAAAGGAGGGCATCCAAACGCTGGCATTGTGACCCCTCTTTTGGC
TGCACATCTTTTGTCAGTCAGTCAGTCTGCACAGTCTCATGCACATTCAT
GACATCATCCTCTCTCGTCATCTCTTTTTACATCATAAATATTTTATTTA
TCACACTGCACCGCAGGCATCCGACCGATGACGCTCGCCGACGTACCCTC
CGCGTGCGAATTGCTTAATTCTTACCTCAACAAATTCAACCTCGCACCCA
TGATGGACGACGCGGACTTCGCCCACTGGCTCTTGCCCCGACATAATGTC
GTGGACAGCTTTGTGGTAGTGAATGAGAGGGGCCGCGTCACGGACATTTG
CAGGTACGAATATGAGAAAGGAAATGATATATCTGTTTTCGCTGGCAATT
TTTCACTTTTCCCCATGTCTTCCTCTCCCTTGTACTTATTCACTTTAAAC
ACAGCTTCTACCATCTGCACTCTACGGTCATCGGCAACACCACCTATCCC
ACCCTTAACGCCGTCTACTCCTTTTACAACGTCGCCACATCCATGCCCCT
AAAGGTACGGTCTCCGTCTATGTCTCTTGCTCGGTCTCTCTTTCTGTACA
GTTTTGCTCTCCCATACGCTCGAGCGACTCATGCTCCTTTCCGTGATTCT
ATCCGAGCAGTCTCTGATGAAGGAAGCTCTGATCCTGGCCAAGCAGAAGG
ACGTGGACGTGGTCAATGCCTTAGACTTAATGGATAACCAAGAATTCCTC
AAGGATCTCAAGTTCGGGCCCGGCGATGGCACACTCCACTACTATGTCTA
CAATTGGGGTTGTGCCGAGATTGAGTCGTCGAAAGTCGGCCTGGTCCTTC
TCTGAGAGAGATTGGAGGGGCGATGAGTGTTTGATGCGGCGGAATGCTGT
GTAACGCACAAGTGATGGCCCTAAGCCTAACAGAGCATGGGAGACATGAA
CAAGAAGAGGGCGGGAAAAGAAGAAGAGCAGGCCAAGCGAATGCTCTATA
TTCAGAATGTATACCCGCAACTGCATCTAAAGCAAGCAAGAACGAAGCGC
GTACCAAAGG
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Coding sequence (CDS) from alignment at chr5:585388..587747+

>NO05G02190.1 ID=NO05G02190.1|Name=NO05G02190.1|organism=Nannochloropsis oceanica|type=CDS|length=1419bp|location=Sequence derived from alignment at chr5:585388..587747+ (Nannochloropsis oceanica)
ATGGCGGAAGAGAAAGTTTCACCACAGAAGACGCCAGATGAAGCACCAGC
ACCCGCAGAGGCCGTGACGCATCAGCTTGCTGCCATGGGTATAGTTGCTG
GGAATGAAAATGATGCTGCTGGAGGAGCCAAGGAGTTGCAGCCCAGAGTA
GGTCAGGGTTTGACAGCAGGACAGCTGGACATGATGCTGCACGCCGAGCA
GGGTATGTTTCGCATGCAGCCACAGGAGAAGACACAGGAAGACTTTAAGT
TCTGGAGCACCCAACCAATGCTGAAACTAGGCGAGAAGCGCGAAGAAAAT
GGACCTATAGAGTCGGACAAGACTCCAGAAGACGTGCGACAAGAGTCCTA
TAATCTACCGGCGGGCTTCATGTGGTGCGAGGTGGACATGACGGACGTAC
AGGAGGCCAAGGAGGTGTACGACCTCTTGAATCAGAATTATGTGGAGGAC
GACGACAACATGTTCCGTTTTGACTATTCCCCTGCCTTTTTGGAATGGGC
TTTGAGTCCGCCAGGGAACGCGAAGGAGTTCGTGGTGGGCATCCGCGTCG
CCCCAACCGCGGCCGCGCTGGCCAAGGGGAAGGGACGGGGCAAGCTCGTT
GGATTCATCACCGGTGTACCCGTGCAGATGCGTGTGTACGATAAAATCAT
GCCCATGGTGGAAATCAACTTCTTGTGCGTGCTCAAGAAGTTGCGATCTA
AGCGCTTGGCACCTGTGCTCATCAAGGAGATAACCCGGCGGGTAAACCTG
ACTGGGGTGTGGCAAGCGGTATACACTGCTGGTGTCCTCCTTCCAAAGCC
GGTGGCAAGCTGCAGGTATCACCATCGCCTCATCCGGCCCAAGAAGCTTG
TAGAGATTGGCTTTACGCGTCTGGCCCCGCGCATGACCATGGCCCGTACC
GTCCGGCTGTATCAGCTCCCTGAAACATGCACAAGCGGCATCCGACCGAT
GACGCTCGCCGACGTACCCTCCGCGTGCGAATTGCTTAATTCTTACCTCA
ACAAATTCAACCTCGCACCCATGATGGACGACGCGGACTTCGCCCACTGG
CTCTTGCCCCGACATAATGTCGTGGACAGCTTTGTGGTAGTGAATGAGAG
GGGCCGCGTCACGGACATTTGCAGCTTCTACCATCTGCACTCTACGGTCA
TCGGCAACACCACCTATCCCACCCTTAACGCCGTCTACTCCTTTTACAAC
GTCGCCACATCCATGCCCCTAAAGTCTCTGATGAAGGAAGCTCTGATCCT
GGCCAAGCAGAAGGACGTGGACGTGGTCAATGCCTTAGACTTAATGGATA
ACCAAGAATTCCTCAAGGATCTCAAGTTCGGGCCCGGCGATGGCACACTC
CACTACTATGTCTACAATTGGGGTTGTGCCGAGATTGAGTCGTCGAAAGT
CGGCCTGGTCCTTCTCTGA
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Synonyms
Publications