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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr5 | genome | chr5:543253..545692 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO05G02010.1 vs.
Match: EWM28217.1 (metal-dependent amidohydrolase 3 [Nannochloropsis gaditana]) HSP 1 Score: 597.8 bits (1540), Expect = 3.000e-167 Identity = 303/489 (61.96%), Postives = 365/489 (74.64%), Query Frame = 0
Query: 1 MLLLHNARLWQWDDDSAASSSSSSLSSSSGRLTQPEAGWCLIDTTKGIFDAVGCVAD--DDEEHAAYKAAQAKATRIIDMNMKCAEGSIILPGLIDAHIHVGYMGEAQEYLQLSGCRTLSELGAAVAAYGKMHPSKSWVVGVGWDQSAWGGDYPSRQDLDKAMGDDKRPVVLYRACWHIVVANTAALEPP-----------AGIDIDAISGFPTGIFRENAVSSITDHIAEADDDVRETYFRNALNQCLRAGLTSVQTNDSNAWHLYRKLESQQKLPLRVFLTVNHDEFESNVNHSQPLHPSFASPSSLLSCERVKLYSDGSLGAETAALRSPYVGTTNTGMLIHTLEELREKIKSAHKAGFQLEVHAIGNRALETVLDALEGAEVPSGARPVITHCQVMGEDLMERMAWQGVVASIQPSFVSTDCKWVQARLPVEVQRVSYCWKSLGERGVMCAGGSDAPVEDCRPLGGIYDAMHRVPHAGKPRGGRK 477
MLLL NA WQWD D+ S GRL + GWCLID +G+FD V C + D++ +AY+ AQA+ATR+IDM KC EG+I+LPGLID+HIHVGYMGEA EYLQL G R+L +L AV YGK +P KSW++GVGWDQS WGG YP+RQ LD+AM +DKRP+VLYR CWHIVVANTAAL+ +G+D+DA SG PTGIFRE AV IT+HIAE ++ +RE Y RNALN CLRAGLT+VQTND AW++Y+ LE++ +LPLRVFLT+N++EFE QP + S L +C R+KLYSDGSLGAETAALRSPY G+TN G+LIH +E+L KI +H+AGFQLEVHAIG+RAL TVL+AL+ A + GARPVITHCQV+GEDL+ RMA QGVVASIQPSFV TDC+W+Q RLP V + SYCWKSL E GV CAGGSD+PVE C PL GIYDAMHR+ HA K +K
Sbjct: 28 MLLLKNACFWQWDPDTLPFS---------GRLAE---GWCLIDDVRGVFDTVFCEDNLCIDDQRSAYEQAQAQATRVIDM--KCNEGNILLPGLIDSHIHVGYMGEACEYLQLRGTRSLDDLSTAVRNYGKENPKKSWIIGVGWDQSGWGGCYPTRQVLDEAMREDKRPLVLYRECWHIVVANTAALQRAGIRLTPTNEHFSGVDLDA-SGVPTGIFRETAVLLITNHIAENNEKLREVYIRNALNNCLRAGLTAVQTNDIKAWNIYQNLEAKGELPLRVFLTINYEEFEEE--GKQPNFHTLNSKPPLFTCRRIKLYSDGSLGAETAALRSPYPGSTNRGLLIHNVEDLAAKICHSHEAGFQLEVHAIGDRALSTVLEALKRARIKPGARPVITHCQVLGEDLINRMAKQGVVASIQPSFVGTDCQWIQERLPSHVLKTSYCWKSLLENGVYCAGGSDSPVEGCEPLSGIYDAMHRLSHASKLTARKK 499
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO05G02010.1 ID=NO05G02010.1|Name=NO05G02010.1|organism=Nannochloropsis oceanica|type=mRNA|length=2166bp
TGAAAAACATAGAGCCGTGTCAGACTATGGTTATGGTGCCATGGTTGGTG
GGCTTTGTGATATAAGAGTGAAAAAATATAAGAGTGGAAGGTGAGAGGCG
ATCGGGGAAATGCTAGATACGAGCACAGAGGAAACGACAACCTCCCCGCT
CGCTCCTTCCCACTCTTACGTACACTGCCACATATCACACAACGCCCTAC
ATCATACCAATCAGTGGAATCTACCCACGACATTGTCAGGGAGCGTATCA
CCGACTTGATCCGTATGCTGCTCCTCCACAATGCTCGTCTGTGGCAATGG
GACGACGACTCAGCCGCATCCTCGTCCTCGTCCTCTCTCTCGTCCTCATC
AGGACGTCTTACCCAGCCCGAGGCAGGGTGGTGCCTCATCGACACGACAA
AAGGCATATTCGATGCAGTGGGTTGTGTAGCAGACGACGACGAAGAGCAT
GCGGCCTACAAGGCTGCGCAAGCCAAGGCGACCCGCATTATTGACATGAA
CATGAAATGCGCCGAAGGCAGCATTATTCTACCGGGTCTAATCGACGCGC
ACATTCACGTCGGTTACATGGGTGAGGCGCAAGAATACCTGCAACTTTCT
GGCTGTCGCACCTTGTCAGAGCTGGGTGCGGCCGTGGCGGCCTACGGCAA
GATGCATCCAAGCAAATCGTGGGTTGTGGGAGTAGGTTGGGACCAATCAG
CCTGGGGTGGAGATTATCCCTCGCGGCAGGACTTGGACAAAGCCATGGGT
GACGATAAGCGGCCTGTCGTATTGTACCGTGCATGTTGGCACATAGTCGT
GGCCAATACGGCTGCTTTGGAACCACCCGCTGGAATAGATATCGACGCCA
TTAGCGGCTTCCCTACGGGAATCTTTCGAGAGAATGCAGTCTCAAGCATC
ACAGACCACATCGCCGAAGCCGACGACGACGTTCGCGAGACCTACTTCCG
GAACGCCCTCAACCAGTGCCTCCGCGCAGGCCTCACGTCGGTTCAAACAA
ATGACAGCAATGCCTGGCACCTTTACCGTAAGCTGGAATCTCAGCAGAAA
CTCCCCCTCCGCGTCTTTCTCACCGTCAACCACGACGAATTTGAGAGCAA
CGTTAACCACAGCCAGCCCCTCCATCCCTCCTTCGCCTCCCCCTCCTCTC
TCCTCTCCTGCGAGCGTGTAAAACTCTACTCCGACGGAAGTCTCGGTGCA
GAAACTGCAGCATTGCGTTCTCCCTACGTTGGTACTACCAACACCGGCAT
GCTTATCCATACACTCGAAGAACTCAGAGAAAAAATCAAGAGTGCGCACA
AAGCAGGATTTCAGCTGGAGGTTCATGCGATAGGAAATCGAGCTTTAGAG
ACAGTGTTGGACGCGCTGGAAGGGGCAGAGGTGCCTTCGGGAGCTCGACC
CGTGATAACTCATTGTCAAGTCATGGGGGAAGATCTGATGGAAAGGATGG
CCTGGCAGGGGGTAGTTGCTTCGATCCAGCCGTCGTTTGTCTCGACGGAT
TGTAAGTGGGTCCAAGCCCGGCTGCCGGTTGAGGTGCAGCGTGTGTCGTA
TTGCTGGAAGAGTCTTGGGGAGCGAGGAGTGATGTGTGCAGGGGGATCGG
ATGCCCCAGTGGAGGACTGTCGGCCTTTGGGAGGGATTTATGACGCGATG
CACCGGGTGCCGCATGCGGGTAAGCCGAGGGGGGGAAGGAAGGATGGAGG
GAGGAAAGGGAAGTGGCATTTTTGCCGGAGGAGTGTTTGAGTTTCTCGGA
AGCTTTAAGGCTGTACACAATTGGTGGAGCGTATGCTTGTCATGCGGAGA
GAAAGCTGGGTCGGATAGCACCGGGGTATCAGGCTGATTTTGTTGTGATT
GATAGGGATGTGACTGGGCCGAGGAGGGAGGAGGACTGTCGGCACGCGTT
GCTTGAGGCGGCCGTGGAGCAAGTGTGGGTTGGGGGTGTGTGTCGCCTTG
ATACAAAAGGGGAAAACGAAAGAAAGGTGTTCGCATCGGCTGCAATTTTG
GGGGGGCCCTTCATTCCGGGCAAAAATGGGCCGCTCCGAGGACAAGGACG
AAAGCAACCGCAACAGCTGGAGGAGGAGGGCATGTGGGTACTGCAAAACA
AACGGTTGGGTGCGGGCTGTTGTGGCCATTGAACATTTAAAATATAGTGT
AGTATGTATTCAGTTG back to topprotein sequence of NO05G02010.1 >NO05G02010.1-protein ID=NO05G02010.1-protein|Name=NO05G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=492bp
MLLLHNARLWQWDDDSAASSSSSSLSSSSGRLTQPEAGWCLIDTTKGIFD
AVGCVADDDEEHAAYKAAQAKATRIIDMNMKCAEGSIILPGLIDAHIHVG
YMGEAQEYLQLSGCRTLSELGAAVAAYGKMHPSKSWVVGVGWDQSAWGGD
YPSRQDLDKAMGDDKRPVVLYRACWHIVVANTAALEPPAGIDIDAISGFP
TGIFRENAVSSITDHIAEADDDVRETYFRNALNQCLRAGLTSVQTNDSNA
WHLYRKLESQQKLPLRVFLTVNHDEFESNVNHSQPLHPSFASPSSLLSCE
RVKLYSDGSLGAETAALRSPYVGTTNTGMLIHTLEELREKIKSAHKAGFQ
LEVHAIGNRALETVLDALEGAEVPSGARPVITHCQVMGEDLMERMAWQGV
VASIQPSFVSTDCKWVQARLPVEVQRVSYCWKSLGERGVMCAGGSDAPVE
DCRPLGGIYDAMHRVPHAGKPRGGRKDGGRKGKWHFCRRSV* back to topmRNA from alignment at chr5:543253..545692- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO05G02010.1 ID=NO05G02010.1|Name=NO05G02010.1|organism=Nannochloropsis oceanica|type=mRNA|length=2440bp|location=Sequence derived from alignment at chr5:543253..545692- (Nannochloropsis oceanica)
TGAAAAACATAGAGCCGTGTCAGACTATGGTTATGGTGCCATGGTTGGTG
GGCTTTGTGATATAAGAGTGAAAAAATATAAGAGTGGAAGGTGAGAGGCG
ATCGGGGAAATGCTAGATACGAGCACAGAGGAAACGACAACCTCCCCGCT
CGCTCCTTCCCACTCTTACGTACACTGCCACATATCACACAACGCCCTAC
ATCATACCAATCAGTGGAATCTACCCACGACATTGTCAGGGAGCGTATCA
CCGACTTGATCCGTATGCTGCTCCTCCACAATGCTCGTCTGTGGCAATGG
GACGACGACTCAGCCGCATCCTCGTCCTCGTCCTCTCTCTCGTCCTCATC
AGGACGTCTTACCCAGCCCGAGGCAGGGTGGTGCCTCATCGACACGACAA
AAGGCATATTCGATGCAGTGGGTTGTGTAGCAGACGACGACGAAGAGCAT
GCGGCCTACAAGGCTGCGCAAGCCAAGGCGACCCGCATTATTGACATGAA
CATGAAATGCGCCGAAGGCAGCATTATTCTACCGGGTCTAATCGACGCGC
ACATTCACGTCGGTTACATGGGTGAGGCGCAAGAATACCTGCAACTTTCT
GGCTGTCGCACCTTGTCAGAGCTGGGTGCGGCCGTGGCGGCCTACGGCAA
GATGCATCCAAGCAAATCGTGGGTTGTGGGAGTAGGTTGGGACCAATCAG
CCTGGGGTGGAGATTATCCCTCGCGGCAGGACTTGGACAAAGCCATGGGT
GACGATAAGCGGCCTGTCGTATTGTACCGTGCATGTTGGCACATAGTCGT
GGCCAATACGGCTGCTTTGGAAGTAAGTGGGATATCGCTGATTCCCGCGA
AGAAGGTGGGTTAGGGGGAAATGCAAGGGAATTCAGGACACGTTTGTATG
CTTTCCGATTTTATTAGTGGGTGGTCCGGTGCATTTACGATGCAATTTTC
CCCCTTTACTAAAGTGGTGTAGAAGTCAACAAGTAAACTTTGATTCATGC
ATCCTCCTAATTTGTATAAGCCTTTCCTGAACCCAATGAGAGGTCGCACA
CCTGTCCCCCCCCGCTTTCTGTCCCCCCTCTCACCACAATCAATAGCCAC
CCGCTGGAATAGATATCGACGCCATTAGCGGCTTCCCTACGGGAATCTTT
CGAGAGAATGCAGTCTCAAGCATCACAGACCACATCGCCGAAGCCGACGA
CGACGTTCGCGAGACCTACTTCCGGAACGCCCTCAACCAGTGCCTCCGCG
CAGGCCTCACGTCGGTTCAAACAAATGACAGCAATGCCTGGCACCTTTAC
CGTAAGCTGGAATCTCAGCAGAAACTCCCCCTCCGCGTCTTTCTCACCGT
CAACCACGACGAATTTGAGAGCAACGTTAACCACAGCCAGCCCCTCCATC
CCTCCTTCGCCTCCCCCTCCTCTCTCCTCTCCTGCGAGCGTGTAAAACTC
TACTCCGACGGAAGTCTCGGTGCAGAAACTGCAGCATTGCGTTCTCCCTA
CGTTGGTACTACCAACACCGGCATGCTTATCCATACACTCGAAGAACTCA
GAGAAAAAATCAAGAGTGCGCACAAAGCAGGATTTCAGCTGGAGGTTCAT
GCGATAGGAAATCGAGCTTTAGAGACAGTGTTGGACGCGCTGGAAGGGGC
AGAGGTGCCTTCGGGAGCTCGACCCGTGATAACTCATTGTCAAGTCATGG
GGGAAGATCTGATGGAAAGGATGGCCTGGCAGGGGGTAGTTGCTTCGATC
CAGCCGTCGTTTGTCTCGACGGATTGTAAGTGGGTCCAAGCCCGGCTGCC
GGTTGAGGTGCAGCGTGTGTCGTATTGCTGGAAGAGTCTTGGGGAGCGAG
GAGTGATGTGTGCAGGGGGATCGGATGCCCCAGTGGAGGACTGTCGGCCT
TTGGGAGGGATTTATGACGCGATGCACCGGGTGCCGCATGCGGGTAAGCC
GAGGGGGGGAAGGAAGGATGGAGGGAGGAAAGGGAAGTGGCATTTTTGCC
GGAGGAGTGTTTGAGTTTCTCGGAAGCTTTAAGGCTGTACACAATTGGTG
GAGCGTATGCTTGTCATGCGGAGAGAAAGCTGGGTCGGATAGCACCGGGG
TATCAGGCTGATTTTGTTGTGATTGATAGGGATGTGACTGGGCCGAGGAG
GGAGGAGGACTGTCGGCACGCGTTGCTTGAGGCGGCCGTGGAGCAAGTGT
GGGTTGGGGGTGTGTGTCGCCTTGATACAAAAGGGGAAAACGAAAGAAAG
GTGTTCGCATCGGCTGCAATTTTGGGGGGGCCCTTCATTCCGGGCAAAAA
TGGGCCGCTCCGAGGACAAGGACGAAAGCAACCGCAACAGCTGGAGGAGG
AGGGCATGTGGGTACTGCAAAACAAACGGTTGGGTGCGGGCTGTTGTGGC
CATTGAACATTTAAAATATAGTGTAGTATGTATTCAGTTG back to topCoding sequence (CDS) from alignment at chr5:543253..545692- >NO05G02010.1 ID=NO05G02010.1|Name=NO05G02010.1|organism=Nannochloropsis oceanica|type=CDS|length=1476bp|location=Sequence derived from alignment at chr5:543253..545692- (Nannochloropsis oceanica)
ATGCTGCTCCTCCACAATGCTCGTCTGTGGCAATGGGACGACGACTCAGC
CGCATCCTCGTCCTCGTCCTCTCTCTCGTCCTCATCAGGACGTCTTACCC
AGCCCGAGGCAGGGTGGTGCCTCATCGACACGACAAAAGGCATATTCGAT
GCAGTGGGTTGTGTAGCAGACGACGACGAAGAGCATGCGGCCTACAAGGC
TGCGCAAGCCAAGGCGACCCGCATTATTGACATGAACATGAAATGCGCCG
AAGGCAGCATTATTCTACCGGGTCTAATCGACGCGCACATTCACGTCGGT
TACATGGGTGAGGCGCAAGAATACCTGCAACTTTCTGGCTGTCGCACCTT
GTCAGAGCTGGGTGCGGCCGTGGCGGCCTACGGCAAGATGCATCCAAGCA
AATCGTGGGTTGTGGGAGTAGGTTGGGACCAATCAGCCTGGGGTGGAGAT
TATCCCTCGCGGCAGGACTTGGACAAAGCCATGGGTGACGATAAGCGGCC
TGTCGTATTGTACCGTGCATGTTGGCACATAGTCGTGGCCAATACGGCTG
CTTTGGAACCACCCGCTGGAATAGATATCGACGCCATTAGCGGCTTCCCT
ACGGGAATCTTTCGAGAGAATGCAGTCTCAAGCATCACAGACCACATCGC
CGAAGCCGACGACGACGTTCGCGAGACCTACTTCCGGAACGCCCTCAACC
AGTGCCTCCGCGCAGGCCTCACGTCGGTTCAAACAAATGACAGCAATGCC
TGGCACCTTTACCGTAAGCTGGAATCTCAGCAGAAACTCCCCCTCCGCGT
CTTTCTCACCGTCAACCACGACGAATTTGAGAGCAACGTTAACCACAGCC
AGCCCCTCCATCCCTCCTTCGCCTCCCCCTCCTCTCTCCTCTCCTGCGAG
CGTGTAAAACTCTACTCCGACGGAAGTCTCGGTGCAGAAACTGCAGCATT
GCGTTCTCCCTACGTTGGTACTACCAACACCGGCATGCTTATCCATACAC
TCGAAGAACTCAGAGAAAAAATCAAGAGTGCGCACAAAGCAGGATTTCAG
CTGGAGGTTCATGCGATAGGAAATCGAGCTTTAGAGACAGTGTTGGACGC
GCTGGAAGGGGCAGAGGTGCCTTCGGGAGCTCGACCCGTGATAACTCATT
GTCAAGTCATGGGGGAAGATCTGATGGAAAGGATGGCCTGGCAGGGGGTA
GTTGCTTCGATCCAGCCGTCGTTTGTCTCGACGGATTGTAAGTGGGTCCA
AGCCCGGCTGCCGGTTGAGGTGCAGCGTGTGTCGTATTGCTGGAAGAGTC
TTGGGGAGCGAGGAGTGATGTGTGCAGGGGGATCGGATGCCCCAGTGGAG
GACTGTCGGCCTTTGGGAGGGATTTATGACGCGATGCACCGGGTGCCGCA
TGCGGGTAAGCCGAGGGGGGGAAGGAAGGATGGAGGGAGGAAAGGGAAGT
GGCATTTTTGCCGGAGGAGTGTTTGA back to top
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