NO05G00120.1, NO05G00120.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G00120.1
Unique NameNO05G00120.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2443
Alignment locationchr5:51980..55473 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:51980..55473 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO05G00120.1 vs.
Match: EWM27098.1 (lipase family protein [Nannochloropsis gaditana])

HSP 1 Score: 301.2 bits (770), Expect = 5.500e-78
Identity = 178/465 (38.28%), Postives = 245/465 (52.69%), Query Frame = 0 
Query:    1 MQRSMDAEGVLCASGASWVAITKSMPPQLGRGSAAKRPVDPQGLFPEPLQDLR-PLPPTIPQNISDHERGTYYFLYRSLLNFYAVISLWKEGGKEGGVGQYPM---GLPEVWGEQRLYYLDDEEGGSEERKEEGAGEKVTSTAAKAEPGSSHWQAPLVMSFVRNETKGEEEGATLLVLIRGTVYANEWNLDFQYDYAAAEEFARFFPLEGEEGREEGRVHGGFFDAFSRLARPLKEEVGWLVGSNSSGKSLRKRPRGEEEDEKEDKEGGRRKGGALQRVLISGHSLGGSVGAMVALYIAEHFPEVQVDLVTFGAPNVGNAAVGRRFDKAVNNRHVTFTGVGGVGKAYYIGDWISQVPCGHLTACPLLESKVGGGADMSDDSPLPRTGSFNYTALGGAVPFTADDLGPHAAGWRTRSDLSSYRYSPVASHVCSYLCFTAPVVGDKEDRCQFTLDFWDTTAAPENRC 462
            +Q +++ +G++C +G+ W+A+T+++PPQLG GS  + PVDP    P+PL+ L  PLP  +P    + E+ TYYFLYR++ N YA +       +     Q PM    LP  W  QR Y L               G  V   A   +P     QAP  +SF R++         +LV++RGT+Y+ EW  +FQY +A   E A +        R  G VH GFF  F  LA  L ++                                  K  A  +V  +GHSLGGSVGA++A Y     P  QV+LV+FGAPNVG+A     F+  V NRH+ F+GVG  G +Y+IGDWISQVPCG +T CPLL        + S         S++YTALGG+VPFT   +  +   W  RSD++ +RYSPVA+H CSY+CFTAP VGD  D+C FTL+   ++   + RC
Sbjct:  110 IQAALNEDGLICLAGSLWLALTQTLPPQLGWGSKIRPPVDPLRELPQPLEVLSMPLPALVPTEKVEAEKPTYYFLYRAIQNLYAAVGA-NARSRGTDSAQEPMLNLALPPAWTNQREYTL------------RWTGSLV---AGVLQP-----QAPFAVSFTRDKE--------MLVVVRGTIYSAEWQRNFQYQHADPTETAAY--------RMPGGVHAGFFAVFKDLAEALVDD--------------------------------EIKRQAPSKVTFTGHSLGGSVGALLAFYTTHVLPRTQVELVSFGAPNVGDATFSSAFNARVRNRHLAFSGVGSEGDSYFIGDWISQVPCGAVTTCPLLTEMSSVDLNGSPSGQRQANESYSYTALGGSVPFTPAQM-QNGRTWALRSDVAGFRYSPVAAHTCSYMCFTAPSVGDAYDQCVFTLEL-GSSVDMDKRC 503
The following BLAST results are available for this feature:
BLAST of NO05G00120.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27098.15.500e-7838.28lipase family protein [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G00120NO05G00120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G00120.1NO05G00120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G00120.1.cds1NO05G00120.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00120.1.cds2NO05G00120.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00120.1.cds3NO05G00120.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00120.1.cds4NO05G00120.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00120.1.cds5NO05G00120.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00120.1.cds6NO05G00120.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00120.1.cds7NO05G00120.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G00120.1 ID=NO05G00120.1|Name=NO05G00120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2443bp
AGGCTTTGGCACACAATATAACCCAGATGCCACCATCACTGGCTTCGCAC
AAACACAAACGACGGCGAGCACTAGGCGCTTCCCAGAGCAGCAGCATCAT
ATGGGTCTGCCTCCTCGGCGCCGCTGCCGCTTCCCCTGCCCCCGCCACCA
CAATCACGAATATGACAAGAAGAATAAGAAGGCATACTTTCGATGATCCT
TCCATTACCTTCGCGACGGGGCCTACTTCTTCTTCTTCCTGGTCATCATG
GTCTTCTTCGTTGTGGCCCGAACGCTGGAGCTGGCCCACTTCCACCACAA
CCGCTTCCTCCTCTCCTGCGTCTACAGGGAGCGTGACGGCCGTACCCACC
CCTTCTCCGACATACTCTAAACTTGACCAGGATAGGATCGACTATGGGGC
GTATGTGCATGAGCATGGAGTGGACTTATGCTACTTTCTTAAATAGGCAC
CACAAGGGAACGAATATCCATCCTGCCCCATGCAGAGAAGTATGGACGCC
GAGGGAGTGTTGTGTGCCTCAGGCGCTTCCTGGGTCGCGATCACGAAATC
CATGCCCCCCCAGCTTGGACGAGGCAGCGCCGCCAAACGCCCTGTCGACC
CGCAAGGTCTCTTCCCGGAGCCGTTGCAGGACCTTCGCCCCCTCCCTCCC
ACCATCCCCCAAAATATCTCCGACCACGAGCGAGGCACCTACTACTTCCT
CTATCGCTCCCTCCTCAATTTTTACGCCGTCATATCCCTGTGGAAGGAGG
GAGGGAAGGAGGGAGGGGTGGGCCAGTATCCAATGGGCCTGCCGGAGGTT
TGGGGCGAGCAACGCCTGTACTACCTGGATGACGAGGAGGGAGGGAGCGA
GGAAAGGAAGGAGGAAGGTGCAGGGGAGAAGGTGACATCGACCGCGGCAA
AAGCTGAGCCAGGCTCGTCGCATTGGCAGGCGCCATTGGTCATGAGCTTC
GTGAGGAATGAGACGAAGGGGGAGGAGGAGGGAGCCACGCTTCTCGTTCT
CATTCGCGGCACCGTCTACGCGAATGAGTGGAATCTCGACTTTCAATACG
ATTACGCAGCGGCGGAAGAATTCGCGCGTTTTTTCCCTTTGGAGGGTGAG
GAAGGGAGGGAGGAAGGGCGGGTCCACGGCGGGTTTTTCGATGCTTTCTC
TCGGTTGGCGCGTCCCTTAAAGGAGGAGGTAGGGTGGCTGGTAGGGTCAA
ACAGCAGTGGGAAAAGTCTGCGAAAACGACCCAGGGGAGAGGAGGAGGAC
GAGAAGGAGGACAAGGAGGGGGGCAGGCGGAAGGGAGGAGCGCTGCAGAG
AGTCCTTATCTCTGGGCACTCGCTCGGGGGTTCGGTGGGGGCGATGGTGG
CCTTATATATCGCCGAGCATTTCCCTGAGGTGCAGGTGGATCTGGTGACA
TTCGGAGCGCCTAATGTAGGGAATGCGGCCGTTGGGAGGAGGTTTGACAA
GGCGGTGAACAACCGACATGTGACCTTTACGGGCGTTGGCGGGGTGGGTA
AGGCCTACTACATCGGGGACTGGATCAGCCAGGTCCCTTGCGGCCACCTG
ACCGCCTGCCCTCTGCTCGAATCTAAGGTGGGCGGGGGGGCCGACATGAG
CGACGACAGTCCGCTGCCGAGGACGGGTAGTTTCAACTACACCGCATTGG
GTGGCGCAGTGCCCTTCACAGCGGACGATTTGGGTCCACACGCCGCAGGT
TGGCGCACACGAAGCGACCTCTCCAGCTACAGGTACAGCCCCGTGGCCTC
GCACGTATGCAGCTATCTGTGTTTCACCGCGCCTGTGGTGGGGGATAAAG
AGGACAGATGCCAATTTACACTTGACTTCTGGGACACCACTGCCGCGCCG
GAAAATCGATGTCCACACTGGATGTAGAAGCTGTAAGGTAGCCCCTTTTG
ACTCCAAGGCCGTCCAGACGATTGATTGGGAGGGAGGGAGGGAGGGAAGT
TGTGATTTAATAGAAGACATAGGGGATAGAGATAGAGAGATGTAAATGTG
GGTGTTGTACGTAATAGGGACAAGTCCGACAAACAGTGCAGCATGAAAAG
AGATTATGTGCGTGGCTGTGCATGTGCGTGTTTTTCCTTTTCGGGGGGGA
AAGAGAAAGAAATGGGGAAGAGATGAGTCGAGGCGCTGAAGCTGGCAGGC
GGGGAGTAACAATGTACAGGCAGAGAGAGAGATCTGTATGCAAGTGCTTC
GAAATTACAAATCGTTAATACACTAGAAGAGATGACAAGGCATTCGCCAC
GGCTTCGCACATTCTTTCTACCCATGGCAGAAACCTTAACCAAGTGGGGC
AAAGACGGATCCTGGCAACGACGAGACGAACTTGGGCAGTGCCTCCGGTT
GGTCGTTGGCGAACAGTAGGGCGATGCATGGATCCCTAGGATCATTGTCT
ACGTAACAGAATTAAAGAGAAAAGTGCACCAAGAGGTTAAAGA
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protein sequence of NO05G00120.1

>NO05G00120.1-protein ID=NO05G00120.1-protein|Name=NO05G00120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=466bp
MQRSMDAEGVLCASGASWVAITKSMPPQLGRGSAAKRPVDPQGLFPEPLQ
DLRPLPPTIPQNISDHERGTYYFLYRSLLNFYAVISLWKEGGKEGGVGQY
PMGLPEVWGEQRLYYLDDEEGGSEERKEEGAGEKVTSTAAKAEPGSSHWQ
APLVMSFVRNETKGEEEGATLLVLIRGTVYANEWNLDFQYDYAAAEEFAR
FFPLEGEEGREEGRVHGGFFDAFSRLARPLKEEVGWLVGSNSSGKSLRKR
PRGEEEDEKEDKEGGRRKGGALQRVLISGHSLGGSVGAMVALYIAEHFPE
VQVDLVTFGAPNVGNAAVGRRFDKAVNNRHVTFTGVGGVGKAYYIGDWIS
QVPCGHLTACPLLESKVGGGADMSDDSPLPRTGSFNYTALGGAVPFTADD
LGPHAAGWRTRSDLSSYRYSPVASHVCSYLCFTAPVVGDKEDRCQFTLDF
WDTTAAPENRCPHWM*
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mRNA from alignment at chr5:51980..55473-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G00120.1 ID=NO05G00120.1|Name=NO05G00120.1|organism=Nannochloropsis oceanica|type=mRNA|length=3494bp|location=Sequence derived from alignment at chr5:51980..55473- (Nannochloropsis oceanica)
AGGCTTTGGCACACAATATAACCCAGATGCCACCATCACTGGCTTCGCAC
AAACACAAACGACGGCGAGCACTAGGCGCTTCCCAGAGCAGCAGCATCAT
ATGGGTCTGCCTCCTCGGCGCCGCTGCCGCTTCCCCTGCCCCCGCCACCA
CAATCACGAATATGACAAGAAGAATAAGAAGGCATACTTTCGATGATCCT
TCCATTACCTTCGCGACGGGGCCTACTTCTTCTTCTTCCTGGTCATCATG
GTCTTCTTCGTTGTGGCCCGAACGCTGGAGCTGGCCCACTTCCACCACAA
CCGCTTCCTCCTCTCCTGCGTCTACAGGGAGCGTGACGGCCGTACCCACC
CCTTCTCCGACATACTCTAAACTTGACCAGGATAGGATCGACTATGGGGC
GTATGTGCATGAGCATGGAGTGGTAAGAAACAAGAGATGGGGAAGGGAAG
GCGGGAGGGAGTGATCGAGGGATGGTATAGGTCATTCATGATGTTCACCA
CGCACATAGGACTTATGCTACTTTCTTAAATAGGCACCACAAGGGAACGA
ATATCCATCCTGCCCCATGCAGAGAAGTATGGACGCCGAGGGAGTGTTGT
GTGCCTCAGGCGCTTCCTGGGTCGCGAGTAAGTCCTCGTAACGAGAAGGG
GAGGAGGGAGGGGAGGAATTCAATGCAAGGGATAAAGCTTGACAGGATTA
GGAATGACGAAAGTGTAAGTGTTTGTGGCGAAACTGCAATGACCATATCG
CTCGCTTGATCATAGTCTTCTCGAACACTCGGAGGCATCCAAGTACTCTC
TTTCCTCACTTCCCTCCCTTCCTCCATCCCTCCCTCCCTCCATCCATCCC
TCTCTTCCACTCTCCCTCCCTATCCTCCACCAGTCACGAAATCCATGCCC
CCCCAGCTTGGACGAGGCAGCGCCGCCAAACGCCCTGTCGACCCGCAAGG
TCTCTTCCCGGAGCCGTTGCAGGACCTTCGCCCCCTCCCTCCCACCATCC
CCCAAAATATCTCCGACCACGAGCGAGGCACCTACTACTTCCTCTATCGC
TCCCTCCTCAATTTTTACGCCGTCATATCCCTGTGGAAGGAGGGAGGGAA
GGAGGGAGGGGTGGGCCAGTATCCAATGGGCCTGCCGGAGGTTTGGGGCG
AGCAACGCCTGTACTACCTGGATGACGAGGAGGGAGGGAGCGAGGAAAGG
AAGGAGGAAGGTGCAGGGGAGAAGGTGACATCGACCGCGGCAAAAGCTGA
GCCAGGCTCGTCGCATTGGCAGGCGCCATTGGTCATGAGCTTCGTGAGGA
ATGAGACGAAGGGGGAGGAGGAGGGAGGTAAGACGGAGGAATTGGGAGTG
CAGGATCTTCTCTCGCTTTTTTTCCACCGAGTACTCAGCTTCGGACCTCC
TGTCCCTCCCTCTCTCCCTCCCTCCCCCCCTTTCCAGCCACGCTTCTCGT
TCTCATTCGCGGCACCGTCTACGCGAATGAGTGGAATCTCGACTTTCAAT
ACGATTACGCAGCGGCGGAAGAATTCGCGCGTTTTTTCCCTTTGGAGGGT
GAGGAAGGGAGGGAGGAAGGGCGGGTCCACGGCGGGTTTTTCGATGCTTT
CTCTCGGTTGGCGCGTCCCTTAAAGGAGGAGGTAGGGTGGCTGGTAGGGT
CAAACAGCAGTGGGAAAAGTCTGCGAAAACGACCCAGGGGAGAGGAGGAG
GACGAGAAGGAGGACAAGGAGGGGGGCAGGCGGAAGGGAGGAGCGCTGCA
GAGAGTCCTTATCTCTGGGCACTCGCTCGGGGGTTCGGTGGGGGCGATGG
TGGCCTTATATATCGCCGAGCATTTCCCTGAGGTGCAGGTGGATCTGGTG
ACATTCGGAGCGCCTAATGTAGGGAATGCGGCCGTTGGGAGGAGGTTTGA
CAAGGCGGTGAACAACCGACATGTAAGGAGGGGGGGAGGAAGGGAGGGAG
GAGGAGGGGAGGGAGGAAGAAGAGGAGAATGCTTCCATGTCTGAGTGATT
CTGGCCTCTCATTTCGCGCCTTTTTTCCTCGCAGGTGACCTTTACGGGCG
TTGGCGGGGTGGGTAAGGCCTACTACATCGGGGACTGGATCAGCCAGGTA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGATCATACGCACGAAGAGAGC
ACAGGAAGCTTTCCGGAGGAGGGAAAAAAGGAAGCTATTTTCTCCATTCA
ACAGCCATGGGTGAGAAAGGGGTTTATCACCAACCTACTCTCTTCCCTAC
CTCCCTACCTCCCTTCCTCTCTCCCTTCCTTAGGTCCCTTGCGGCCACCT
GACCGCCTGCCCTCTGCTCGAATCTAAGGTGGGCGGGGGGGCCGACATGA
GCGACGACAGTCCGCTGCCGAGGACGGGTAGTTTCAACTACACCGCATGT
AGGGAGGGAGGGAGGGAGGGAGGGACGGAGGAACTGCACGGATATTTCCA
CCTCTGGACTGGGTCGTGGTGTCAGTATGCTGACGCTTCCTTCCCTCCCT
CACTCCCTCTTTTTGTCATACTTGTCAGTGGGTGGCGCAGTGCCCTTCAC
AGCGGACGATTTGGGTCCACACGCCGCAGGTTGGCGCACACGAAGCGACC
TCTCCAGCTACAGGTAACGCAAGGAGAGAGTCGAGGGAGGGAGGGAAGGA
GGGAGGGAGGGGAGGGAGGGAAGGAGAGAGTGGATGTCGCTATTTGATCT
TCGCCGCGCCTAACGCTGAAGAGATATATGCCCCTCATCCTCCCTCCTTC
CCTTCATTCTTCCCTCCCTCCTTATTCCGCCAGGTACAGCCCCGTGGCCT
CGCACGTATGCAGCTATCTGTGTTTCACCGCGCCTGTGGTGGGGGATAAA
GAGGACAGATGCCAATTTACACTTGACTTCTGGGACACCACTGCCGCGCC
GGAAAATCGATGTCCACACTGGATGTAGAAGCTGTAAGGTAGCCCCTTTT
GACTCCAAGGCCGTCCAGACGATTGATTGGGAGGGAGGGAGGGAGGGAAG
TTGTGATTTAATAGAAGACATAGGGGATAGAGATAGAGAGATGTAAATGT
GGGTGTTGTACGTAATAGGGACAAGTCCGACAAACAGTGCAGCATGAAAA
GAGATTATGTGCGTGGCTGTGCATGTGCGTGTTTTTCCTTTTCGGGGGGG
AAAGAGAAAGAAATGGGGAAGAGATGAGTCGAGGCGCTGAAGCTGGCAGG
CGGGGAGTAACAATGTACAGGCAGAGAGAGAGATCTGTATGCAAGTGCTT
CGAAATTACAAATCGTTAATACACTAGAAGAGATGACAAGGCATTCGCCA
CGGCTTCGCACATTCTTTCTACCCATGGCAGAAACCTTAACCAAGTGGGG
CAAAGACGGATCCTGGCAACGACGAGACGAACTTGGGCAGTGCCTCCGGT
TGGTCGTTGGCGAACAGTAGGGCGATGCATGGATCCCTAGGATCATTGTC
TACGTAACAGAATTAAAGAGAAAAGTGCACCAAGAGGTTAAAGA
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Coding sequence (CDS) from alignment at chr5:51980..55473-

>NO05G00120.1 ID=NO05G00120.1|Name=NO05G00120.1|organism=Nannochloropsis oceanica|type=CDS|length=1398bp|location=Sequence derived from alignment at chr5:51980..55473- (Nannochloropsis oceanica)
ATGCAGAGAAGTATGGACGCCGAGGGAGTGTTGTGTGCCTCAGGCGCTTC
CTGGGTCGCGATCACGAAATCCATGCCCCCCCAGCTTGGACGAGGCAGCG
CCGCCAAACGCCCTGTCGACCCGCAAGGTCTCTTCCCGGAGCCGTTGCAG
GACCTTCGCCCCCTCCCTCCCACCATCCCCCAAAATATCTCCGACCACGA
GCGAGGCACCTACTACTTCCTCTATCGCTCCCTCCTCAATTTTTACGCCG
TCATATCCCTGTGGAAGGAGGGAGGGAAGGAGGGAGGGGTGGGCCAGTAT
CCAATGGGCCTGCCGGAGGTTTGGGGCGAGCAACGCCTGTACTACCTGGA
TGACGAGGAGGGAGGGAGCGAGGAAAGGAAGGAGGAAGGTGCAGGGGAGA
AGGTGACATCGACCGCGGCAAAAGCTGAGCCAGGCTCGTCGCATTGGCAG
GCGCCATTGGTCATGAGCTTCGTGAGGAATGAGACGAAGGGGGAGGAGGA
GGGAGCCACGCTTCTCGTTCTCATTCGCGGCACCGTCTACGCGAATGAGT
GGAATCTCGACTTTCAATACGATTACGCAGCGGCGGAAGAATTCGCGCGT
TTTTTCCCTTTGGAGGGTGAGGAAGGGAGGGAGGAAGGGCGGGTCCACGG
CGGGTTTTTCGATGCTTTCTCTCGGTTGGCGCGTCCCTTAAAGGAGGAGG
TAGGGTGGCTGGTAGGGTCAAACAGCAGTGGGAAAAGTCTGCGAAAACGA
CCCAGGGGAGAGGAGGAGGACGAGAAGGAGGACAAGGAGGGGGGCAGGCG
GAAGGGAGGAGCGCTGCAGAGAGTCCTTATCTCTGGGCACTCGCTCGGGG
GTTCGGTGGGGGCGATGGTGGCCTTATATATCGCCGAGCATTTCCCTGAG
GTGCAGGTGGATCTGGTGACATTCGGAGCGCCTAATGTAGGGAATGCGGC
CGTTGGGAGGAGGTTTGACAAGGCGGTGAACAACCGACATGTGACCTTTA
CGGGCGTTGGCGGGGTGGGTAAGGCCTACTACATCGGGGACTGGATCAGC
CAGGTCCCTTGCGGCCACCTGACCGCCTGCCCTCTGCTCGAATCTAAGGT
GGGCGGGGGGGCCGACATGAGCGACGACAGTCCGCTGCCGAGGACGGGTA
GTTTCAACTACACCGCATTGGGTGGCGCAGTGCCCTTCACAGCGGACGAT
TTGGGTCCACACGCCGCAGGTTGGCGCACACGAAGCGACCTCTCCAGCTA
CAGGTACAGCCCCGTGGCCTCGCACGTATGCAGCTATCTGTGTTTCACCG
CGCCTGTGGTGGGGGATAAAGAGGACAGATGCCAATTTACACTTGACTTC
TGGGACACCACTGCCGCGCCGGAAAATCGATGTCCACACTGGATGTAG
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Synonyms
Publications