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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr4 | genome | chr4:1368523..1370252 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO04G04950.1 ID=NO04G04950.1|Name=NO04G04950.1|organism=Nannochloropsis oceanica|type=mRNA|length=1398bp TCCTTGGTTAATTTACAAACAATCCACGGTGCATGAGGCGAGAGAAAAGG GAGAAAAGAGGAAAAAGGGAGGTTTTCTAGCACGGCTTTGCCTTAATTCC GCTTGACTGCCGCAGATAGAGGTGGATCAGGATATTATAGATTACTCTCA AGATCATATTGGTCAAGTGTATTTTGTGTTTCCTGTGCGCACGTGCAGTG TATGTCCATTCATTATACCTCCACGACCAGTTTCACAAGGCTGAGACAGA GGTTGCATCGCCGTCTTTTCTTCAAGGCCGTCTGTAACCACATGCACAAA CATATTTAACAGGACAGAGGCCCACGTATGTCTTTGTCGTCGTCTTCATC TGTTGATGTCATGGCTGCTGCAGCGGCCATTGGTGGTCCGCCGGCAAGTC CAGCTCGAGAGCTTGCTCTCTTCGTCCTCGATCAAACCCTTCTCGGGCTC CGAACTGCAGCCCAGGCGGTGGCCACGGTTGTGAAAGATCCTTACGTAGT CTCCCTGCATAAGCGCATCCTTATCCCTATTCTCGGCCTCTCTCTCCTCT TCTATCTCGGCACCATCGTGCCTTTGCGCCTAATTTTGTGGTTCACGGGC TTGTCCTCACAGACGCCCCGCGTTCAGCAATGGTACTGGGTCATGAACAC CACCATCCCCATCCTCATCAACATCATCCTCCGCTTCGTTTGGTACGCCC CTCTCGACCGATGCTACCTCGCTGTGCTATCCTCGCTCGACGAGTCTCTG ACGGCCGACCTGCGTAAGCGAGCCCCTCGTTCCGGTTGGGACATAGCCAA GACCGAAGCAAAGCGTTGGATGAGCGTCGTCCTTTTCCTCCCAATCTATT GGCTTCTGAGCTGGATTCCTTTGGTGGGCCGCGGGCTCAAGTTTATATTC AAGAACTCAATCTCCCCTACCTTGGGCGGCAGCAACCCCCCCTCTCCCGC CGCGCCGAGCTCGCCTTGTTGGTGCGTGAAAATCCTCAGAAGGTCGCAGC GCTTGCCTTTGTGTTACCATTTACCCTTGTTTTGATGATTCCAATTTTGG GGCCCCTTAGCATCATAATTGCACATGCAGCGGCACCTGTGGCCTTAGTA AAGTTGGTGTTGCCACAGAGGAAGAAGGAGGAGGGGGGAAGAGGTAAAGG GAATGCGAAAGAGGAGGTAGAGGAGAAAAAGAAGGCAAAGTAGGGAGTGT ACATAGCGAACCGTATAGAAAGAGAAGTAAAGCAAGTTACATTGTGAAAC AGAAGCCGAATACTCATTCCATCCATTCACTTGTGATTCTAGTCGTGCAT TTCCTCAAAACCGCTGTTGGATGTAAAGTGGTTGTCCTTCCCCCCTCCCT CCTTCCCTCCTTCCCTCCATCCTTTTTGCTATCAAAACTTACCACTTT back to topprotein sequence of NO04G04950.1 >NO04G04950.1-protein ID=NO04G04950.1-protein|Name=NO04G04950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=236bp MSLSSSSSVDVMAAAAAIGGPPASPARELALFVLDQTLLGLRTAAQAVAT VVKDPYVVSLHKRILIPILGLSLLFYLGTIVPLRLILWFTGLSSQTPRVQ QWYWVMNTTIPILINIILRFVWYAPLDRCYLAVLSSLDESLTADLRKRAP RSGWDIAKTEAKRWMSVVLFLPIYWLLSWIPLVGRGLKFIFKNSISPTLG GSNPPSPAAPSSPCWCVKILRRSQRLPLCYHLPLF* back to topmRNA from alignment at chr4:1368523..1370252+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO04G04950.1 ID=NO04G04950.1|Name=NO04G04950.1|organism=Nannochloropsis oceanica|type=mRNA|length=1730bp|location=Sequence derived from alignment at chr4:1368523..1370252+ (Nannochloropsis oceanica) TCCTTGGTTAATTTACAAACAATCCACGGTGCATGAGGCGAGAGAAAAGG
GAGAAAAGAGGAAAAAGGGAGGTTTTCTAGCACGGCTTTGCCTTAATTCC
GCTTGACTGCCGCAGATAGAGGTGGATCAGGATATTATAGATTACTCTCA
AGATCATATTGGTCAAGTGTATTTTGTGTTTCCTGTGCGCACGTGCAGTG
TATGTCCATTCATTATACCTCCACGACCAGTTTCACAAGGCTGAGACAGA
GGTTGCATCGCCGTCTTTTCTTCAAGGCCGTCTGTAACCACATGCACAAA
CATATTTAACAGGACAGAGGCCCACGTATGTCTTTGTCGTCGTCTTCATC
TGTTGATGTCATGGCTGCTGCAGCGGCCATTGGTGGTCCGCCGGCAAGTC
CAGCTCGAGAGCTTGCTCTCTTCGTCCTCGATCAAACCCTTCTCGGGCTC
CGAACTGCAGCCCAGGCGGTGGCCACGGTTGTGAAAGATCCTTACGTAGT
CTCCCTGCATAAGCGCATCCTTATCCCTATTCTCGGCCTCTCTCTCCTCT
TCTATCTCGGCACCATCGTGCCTTTGCGCCTAATTTTGTGGTTCACGGGC
TTGTCCTCACAGACGCCCCGCGTTCAGCAATGGTACTGGGTCATGAACAC
CACCATCCCCATCCTCATCAACATCATCCTCCGCTTCGTTTGGTACGCCC
CTCTCGACCGATGCTACCTCGCTGTGCTATCCTCGCTCGACGAGTCTCTG
ACGGCCGACCTGCGTAAGCGAGCCCCTCGTTCCGGTTGGGACATAGCCAA
GACCGAAGCAAAGCGTTGGATGAGCGTCGTCCTTTTCCTCCCAATCTATT
GGCTTCTGAGCTGGATTCCTTTGGTGGGCCGCGGGCTCAAGTTTATATTC
AAGGTTCGTGGGGTGGAGGATGGTGGTCGATACAAGAAGAAGTGGGGAAG
AGCAGGGGAAAGGAAGTACCGAACGTCCTTTTTTCACTGATGCCAGAAGC
GATAGACTTAGAGCTTGAGTGACTGACATGTGTATTCGCTTTGAGACATT
GTGAGAGCACACATTCGACAATTCACTGTCCAAACCCCCACTCAAACCAC
AGCTCTACACTCTCTCCCGCTACCTCTCCCCCTCGCATACTGTCGCCGCT
GCCGTCATCACCACCTTCCCCCTCACTGAATACCCCTCCACTCTCCTCCT
CTCCTTTCTTCTCTCCCTCACCGCCTCCTTGCAAGAACTCAATCTCCCCT
ACCTTGGGCGGCAGCAACCCCCCCTCTCCCGCCGCGCCGAGCTCGCCTTG
TTGGTGCGTGAAAATCCTCAGAAGGTCGCAGCGCTTGCCTTTGTGTTACC
ATTTACCCTTGTTTTGATGATTCCAATTTTGGGGCCCCTTAGCATCATAA
TTGCACATGCAGCGGCACCTGTGGCCTTAGTAAAGTTGGTGTTGCCACAG
AGGAAGAAGGAGGAGGGGGGAAGAGGTAAAGGGAATGCGAAAGAGGAGGT
AGAGGAGAAAAAGAAGGCAAAGTAGGGAGTGTACATAGCGAACCGTATAG
AAAGAGAAGTAAAGCAAGTTACATTGTGAAACAGAAGCCGAATACTCATT
CCATCCATTCACTTGTGATTCTAGTCGTGCATTTCCTCAAAACCGCTGTT
GGATGTAAAGTGGTTGTCCTTCCCCCCTCCCTCCTTCCCTCCTTCCCTCC
ATCCTTTTTGCTATCAAAACTTACCACTTT back to topCoding sequence (CDS) from alignment at chr4:1368523..1370252+ >NO04G04950.1 ID=NO04G04950.1|Name=NO04G04950.1|organism=Nannochloropsis oceanica|type=CDS|length=708bp|location=Sequence derived from alignment at chr4:1368523..1370252+ (Nannochloropsis oceanica) ATGTCTTTGTCGTCGTCTTCATCTGTTGATGTCATGGCTGCTGCAGCGGC CATTGGTGGTCCGCCGGCAAGTCCAGCTCGAGAGCTTGCTCTCTTCGTCC TCGATCAAACCCTTCTCGGGCTCCGAACTGCAGCCCAGGCGGTGGCCACG GTTGTGAAAGATCCTTACGTAGTCTCCCTGCATAAGCGCATCCTTATCCC TATTCTCGGCCTCTCTCTCCTCTTCTATCTCGGCACCATCGTGCCTTTGC GCCTAATTTTGTGGTTCACGGGCTTGTCCTCACAGACGCCCCGCGTTCAG CAATGGTACTGGGTCATGAACACCACCATCCCCATCCTCATCAACATCAT CCTCCGCTTCGTTTGGTACGCCCCTCTCGACCGATGCTACCTCGCTGTGC TATCCTCGCTCGACGAGTCTCTGACGGCCGACCTGCGTAAGCGAGCCCCT CGTTCCGGTTGGGACATAGCCAAGACCGAAGCAAAGCGTTGGATGAGCGT CGTCCTTTTCCTCCCAATCTATTGGCTTCTGAGCTGGATTCCTTTGGTGG GCCGCGGGCTCAAGTTTATATTCAAGAACTCAATCTCCCCTACCTTGGGC GGCAGCAACCCCCCCTCTCCCGCCGCGCCGAGCTCGCCTTGTTGGTGCGT GAAAATCCTCAGAAGGTCGCAGCGCTTGCCTTTGTGTTACCATTTACCCT TGTTTTGA back to top
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