NO04G04860.1, NO04G04860.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G04860.1
Unique Name	NO04G04860.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3391
Alignment location	chr4:1327447..1333120 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:1327447..1333120 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G04860.1 vs.
Match: EWM28877.1 (lactase-phlorizin hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 887.1 bits (2291), Expect = 3.500e-254
Identity = 470/700 (67.14%), Postives = 534/700 (76.29%), Query Frame = 0

Query:    1 MADRSLTTGMRTQRGEWFRSVAPPVVVVCALAGLASGLYIFLGTNPFVYRVPPSVEG--TGKPSMQCSLYQDPTDPTSIINMPDKEVFDSKDTKFPAEFAWGTATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKEDVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGIEPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWITLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTKYQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGDYPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHPLFRASSGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYITENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGYFYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKDMMTRFS--PTEAVPVIPTTPAAGAAAAEEANPAGPVAPIAPIGEDVSPAQPARVSVVPAAGAPSTVQDAATV---ADLQEGLIAAADAAAAAAAAAAAAAAAADAAAADASAAAPVTQ-GVPMDSAGVAQTHVLAEELQGFEEGEEGVMEVEVGEE 693
            MAD   T  M +QR  W R+V  PV +V +L  +A  +Y  LG+   +YR P S     +GK SMQC +YQDP DPTS INMP KEVF S  T+FP+ FAWG ATSAYQIEGAWDEDGRG SIWDTF+HTKGKVE N+NGDVACDHYHLYKEDVA+MK LGI +YRFSISW RI+P GTGNVNFKGLE+YS LVDELLANGIEPY TLYHWDLP+ LQ++H GW+S VTSDAFAEYAD+VF+ LGDRVKYWITLNEPWCSALLGYGIGVHAPGIK+IKSGAYLAGH+LLLAHSKAVK+Y+ KYQ  QGGKIGITINSD+KQ  C+ + DK AAERSQIFVMGWFADPVF GDYPEEMRKTCGDRLPSFT EEKA+L+GSLDFLGLNHYTTALV+ PLFR + GNYYTDMGTMDSSDKSWPVGESGWLKDVPWG RKLLVWI+ RY+DP+IYITENGVSGP E  VK D+EGL+DTFRQ+FMQGYI E+YKAI +DKV V GYFYW+LMDNFEWADG+RPRFG++RVNFTSQAR+PKES+ MY++MM R +  P E  PV+PT PA  AA    A   GPV P+A  GED     P  ++    A A S  +DA  V     ++EG  AA D AA  A  + A           AS      + G+P   A VA     +E     +EG     E E G E
Sbjct:    1 MADE--TQLMPSQRRGWLRNVFAPVTLVTSLVAVAVAVYFVLGSKSLIYRRPGSSSSLESGKTSMQCKVYQDPADPTSTINMPSKEVFASNLTQFPSGFAWGAATSAYQIEGAWDEDGRGLSIWDTFSHTKGKVENNENGDVACDHYHLYKEDVAVMKALGITNYRFSISWPRILPSGTGNVNFKGLEFYSDLVDELLANGIEPYATLYHWDLPQALQDKHDGWYSPVTSDAFAEYADVVFDALGDRVKYWITLNEPWCSALLGYGIGVHAPGIKDIKSGAYLAGHHLLLAHSKAVKLYREKYQVLQGGKIGITINSDFKQYYCDNTLDKAAAERSQIFVMGWFADPVFLGDYPEEMRKTCGDRLPSFTEEEKADLKGSLDFLGLNHYTTALVASPLFRTNGGNYYTDMGTMDSSDKSWPVGESGWLKDVPWGLRKLLVWIQNRYDDPLIYITENGVSGPGESSVKKDSEGLDDTFRQSFMQGYIGELYKAIAYDKVQVGGYFYWSLMDNFEWADGFRPRFGLVRVNFTSQARFPKESSFMYQEMMARVTPPPPEPEPVVPTVPAVPAA----AEGTGPV-PVA--GED-----PGGMAGGGEAAADS--EDAVGVDGDVSIEEG--AAGDGAAIGAGESPATEERGSGLDPLASIPPEAPEDGLPSTDAAVA---AASEAKLQVKEGGNPQEEEEAGRE 679

The following BLAST results are available for this feature:

BLAST of NO04G04860.1 vs.

BLAST of NO04G04860.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28877.1	3.500e-254	67.14	lactase-phlorizin hydrolase [Nannochloropsis gadit...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G04860	NO04G04860	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04860.1	NO04G04860.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04860.1.cds1	NO04G04860.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds2	NO04G04860.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds3	NO04G04860.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds4	NO04G04860.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds5	NO04G04860.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds6	NO04G04860.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds7	NO04G04860.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds8	NO04G04860.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds9	NO04G04860.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds10	NO04G04860.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds11	NO04G04860.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds12	NO04G04860.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04860.1.cds13	NO04G04860.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:1327447..1333120-
coding sequence from alignment at chr4:1327447..1333120-

mRNA sequence

>NO04G04860.1 ID=NO04G04860.1|Name=NO04G04860.1|organism=Nannochloropsis oceanica|type=mRNA|length=3391bp
GGGGAGGTTCTTGTTTTCTTCTGTATTCTTTTTTGGACGATTCTTTGATT
TAAGTGATATAAAAGAGGGAAAGACAATGCTCTGAATAATCGTGCTGGAG
TAAGATCGTCACATTGGAAACACATTGACATGAGAGGGGAAAAATCGACA
TGGGCCAGACGCCGGAAGGCAAGAGAGGGCAGGGGGGAGGACAAAGGCGC
TTGCCACAGTAACAAACAGGAGGCACAGGTTCAGAGATTGCGATTCACTT
GAAATTGTGAACACATATTGTGCTTTTAGTTTACTATAGGGCCCTCCAAG
ATATCTCGAAGAGCACAACCGGCAAAGAAGGCGAACACGTCGGAACACGT
TCACGTGGAAAACTCTTCGCCTCCACATTTTTCATAGCTCTTGTTCGTCA
AATTAGGCACAGCAACTTAAACAATAGGATCTGACTGATCGAACGAAGGT
ATGTATTTTACATAGCTGAAACCAGGGACGGATAAACTTTTGCTTGGTCT
TCTTGGCCATGTTGCAAGTGCGTGTCGCCACTGGCGACTTCCCTCGGGTT
TCCCATAGCACGAGACATACACACACGATGCTAGCGTCTCCTCTTGATCA
CGCGCCGCAAACCTTTCCACGCCACAATTTGCACATACGCAATTTACAAG
ACGATATGCCAGCAAGGGCAGGGTAAGGGAGAGGCACAAGAGTCCAAGGA
AAAGACGGATTGCAGTAGGATTTGTTGTCGTTCCACTTTGAGGAGACGTA
CTCCAAAATCGAGCCAAGTCCGCCATCCCCGATGTCACATGCCTTTCAAC
TGGCCACCTGGACGGCTGGCTTCCAACATTGTGTTTGCCCAAACAGAGTC
TGATCTTGGCATCATGGAGGCCTCCAGGAGGCAGCGCGGCTGGCATAATT
ACTTTTTTGGCGCCGAGCGGAGGGTGTCACATCCCGTCCACTGCCAACAA
GAGCGCATTAAGGAGCACAATACCAAGCACCTCTGGCAGAGCGCACTCCT
CCACTCACCGCTTCACATACATACACACAGATAAGAGGAAGCGTTCAAGG
TAGCAGGTGATCACCAAGCAAAAAGCGACCGCACCGATCTATTCTTACTC
GGCCCGCCCACCCTCCGGTGCTCGCCCTCAACTACGACATAGACCAAGTG
CTTACCATGGCAGATCGATCCCTCACCACTGGCATGCGCACTCAGAGAGG
CGAATGGTTTCGCAGCGTTGCTCCTCCTGTCGTGGTGGTGTGTGCGTTGG
CAGGACTGGCCTCTGGCCTCTACATATTCCTAGGCACTAATCCATTTGTC
TATCGCGTTCCTCCTTCCGTAGAGGGGACTGGAAAGCCCAGCATGCAATG
CAGCCTTTATCAAGACCCCACCGATCCTACGTCTATCATTAATATGCCCG
ATAAAGAGGTGTTTGACAGCAAGGATACCAAGTTCCCGGCAGAGTTCGCG
TGGGGTACGGCCACGAGTGCTTATCAGATAGAAGGAGCTTGGGACGAGGA
TGGACGGGGAGAATCCATTTGGGACACGTTTGCGCATACAAAGGGCAAGG
TGGAGGGCAATCAGAACGGGGACGTGGCATGCGACCACTACCATCTCTAC
AAAGAGGACGTGGCCCTCATGAAGGAGCTTGGCATTAAACATTATCGATT
CTCCATATCTTGGTCTAGAATCATACCTGATGGCACGGGGAACGTCAATT
TCAAGGGCCTGGAGTGGTACAGCGGCCTCGTGGACGAGTTATTAGCGAAC
GGCATTGAGCCCTACGTGACTCTCTATCACTGGGATCTACCGGAGAAACT
GCAGGAGCGGCACCAGGGCTGGTGGTCGCAGGTGACGAGCGACGCCTTTG
CTGAGTATGCCGACATTGTCTTCAATCATTTGGGCGACCGTGTCAAGTAT
TGGATTACGTTAAACGAGCCCTGGTGCTCTGCCCTTCTAGGGTACGGCAT
CGGAGTCCACGCTCCGGGTATCAAAAACATCAAGTCAGGCGCCTACCTCG
CGGGCCACAACCTCTTGCTCGCGCACTCCAAAGCCGTCAAGGTCTATAAA
ACCAAATACCAAGCAGCGCAAGGGGGAAAGATCGGGATCACCATCAACAG
TGATTACAAACAGTGCGCCTGTGAAACGAGCCAGGACAAGGAGGCAGCGG
AGAGGTCTCAGATCTTCGTCATGGGGTGGTTTGCCGACCCCGTGTTTTTT
GGAGACTACCCGGAAGAGATGCGGAAGACGTGCGGCGATCGCCTCCCCTC
CTTCACGGCGGAAGAGAAAGCTAATCTGCGGGGTTCATTGGATTTCTTAG
GCCTTAATCATTACACCACGGCCTTGGTGTCACACCCACTCTTCCGCGCG
AGTAGTGGGAATTATTACACGGACATGGGCACTATGGATTCGTCGGATAA
GTCCTGGCCTGTGGGTGAGTCCGGCTGGCTTAAGGATGTCCCCTGGGGAT
TCCGCAAGCTCTTAGTCTGGATCAAGGCGCGATACAACGATCCGATCATC
TACATCACCGAAAACGGCGTCTCGGGTCCCAAGGAAGATGAAGTTAAATC
AGATGCAGAAGGCTTGAACGACACCTTCCGTCAGACGTTTATGCAAGGCT
ATATCGCTGAGATGTACAAGGCCATCAAGTTCGACAAGGTTAATGTCGCA
GGATATTTCTACTGGGCTTTAATGGATAATTTCGAATGGGCCGACGGTTA
CCGCCCTCGTTTCGGGATCATCCGTGTGAATTTCACCAGCCAAGCTCGCT
ATCCTAAGGAAAGCGCACTCATGTATAAGGATATGATGACTCGTTTCTCA
CCTACCGAGGCCGTGCCGGTCATCCCTACTACTCCTGCTGCTGGTGCAGC
TGCTGCTGAAGAAGCAAATCCCGCTGGGCCTGTTGCACCTATAGCTCCGA
TTGGTGAAGATGTTTCTCCTGCCCAGCCGGCCCGGGTGTCAGTAGTACCA
GCAGCAGGCGCTCCTTCTACTGTACAAGACGCTGCCACTGTTGCAGATTT
ACAAGAAGGACTTATCGCTGCTGCTGATGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCCGCTGATGCTGCTGCTGCTGATGCCTCA
GCCGCTGCGCCTGTCACTCAGGGTGTTCCCATGGATAGTGCCGGTGTGGC
CCAAACCCACGTGCTTGCGGAAGAGCTTCAGGGATTCGAGGAGGGAGAGG
AGGGAGTGATGGAGGTGGAGGTGGGTGAGGAGGGAGGACAGCAACGATTG
CGGAAGCTGTAGGAGATGGGTGAAAGAAAGGAATGAGGGAGGGAGGGAGG
CAGGGGGATCGAAATTCGTGTGATATATGATAATTCTTGTAGAGAGCTCA
AAAAGAAGTAAAGACAGTGTGAGAGTTCGCAATGTAATATA

protein sequence of NO04G04860.1

>NO04G04860.1-protein ID=NO04G04860.1-protein|Name=NO04G04860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=702bp
MADRSLTTGMRTQRGEWFRSVAPPVVVVCALAGLASGLYIFLGTNPFVYR
VPPSVEGTGKPSMQCSLYQDPTDPTSIINMPDKEVFDSKDTKFPAEFAWG
TATSAYQIEGAWDEDGRGESIWDTFAHTKGKVEGNQNGDVACDHYHLYKE
DVALMKELGIKHYRFSISWSRIIPDGTGNVNFKGLEWYSGLVDELLANGI
EPYVTLYHWDLPEKLQERHQGWWSQVTSDAFAEYADIVFNHLGDRVKYWI
TLNEPWCSALLGYGIGVHAPGIKNIKSGAYLAGHNLLLAHSKAVKVYKTK
YQAAQGGKIGITINSDYKQCACETSQDKEAAERSQIFVMGWFADPVFFGD
YPEEMRKTCGDRLPSFTAEEKANLRGSLDFLGLNHYTTALVSHPLFRASS
GNYYTDMGTMDSSDKSWPVGESGWLKDVPWGFRKLLVWIKARYNDPIIYI
TENGVSGPKEDEVKSDAEGLNDTFRQTFMQGYIAEMYKAIKFDKVNVAGY
FYWALMDNFEWADGYRPRFGIIRVNFTSQARYPKESALMYKDMMTRFSPT
EAVPVIPTTPAAGAAAAEEANPAGPVAPIAPIGEDVSPAQPARVSVVPAA
GAPSTVQDAATVADLQEGLIAAADAAAAAAAAAAAAAAAADAAAADASAA
APVTQGVPMDSAGVAQTHVLAEELQGFEEGEEGVMEVEVGEEGGQQRLRK
L*

mRNA from alignment at chr4:1327447..1333120-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G04860.1 ID=NO04G04860.1|Name=NO04G04860.1|organism=Nannochloropsis oceanica|type=mRNA|length=5674bp|location=Sequence derived from alignment at chr4:1327447..1333120- (Nannochloropsis oceanica)
GGGGAGGTTCTTGTTTTCTTCTGTATTCTTTTTTGGACGATTCTTTGATT
TAAGTGATATAAAAGAGGGAAAGACAATGCTCTGAATAATCGTGCTGGAG
TAAGATCGTCACATTGGAAACACATTGACATGAGAGGGGAAAAATCGACA
TGGGCCAGACGCCGGAAGGCAAGAGAGGGCAGGGGGGAGGACAAAGGCGC
TTGCCACAGTAACAAACAGGAGGCACAGGTTCAGAGATTGCGATTCACTT
GAAATTGTGAACACATATTGTGCTTTTAGTTTACTATAGGGCCCTCCAAG
ATATCTCGAAGAGCACAACCGGCAAAGAAGGCGAACACGTCGGAACACGT
TCACGTGGAAAACTCTTCGCCTCCACATTTTTCATAGCTCTTGTTCGTCA
AATTAGGCACAGCAACTTAAACAATAGGATCTGACTGATCGAACGAAGGT
ATGTATTTTACATAGCTGAAACCAGGGACGGATAAACTTTTGCTTGGTCT
TCTTGGCCATGTTGCAAGTGCGTGTCGCCACTGGCGACTTCCCTCGGGTT
TCCCATAGCACGAGACATACACACACGATGCTAGCGTCTCCTCTTGATCA
CGCGCCGCAAACCTTTCCACGCCACAATTTGCACATACGCAATTTACAAG
ACGATATGCCAGCAAGGGCAGGGTAAGGGAGAGGCACAAGAGTCCAAGGA
AAAGACGGATTGCAGTAGGATTTGTTGTCGTTCCACTTTGAGGAGACGTA
CTCCAAAATCGAGCCAAGTCCGCCATCCCCGATGTCACATGCCTTTCAAC
TGGCCACCTGGACGGCTGGCTTCCAACATTGTGTTTGCCCAAACAGAGTC
TGATCTTGGCATCATGGAGGCCTCCAGGAGGCAGCGCGGCTGGCATAATT
ACTTTTTTGGCGCCGAGCGGAGGGTGTCACATCCCGTCCACTGCCAACAA
GAGCGCATTAAGGAGCACAATACCAAGCACCTCTGGCAGAGCGCACTCCT
CCACTCACCGCTTCACATACATACACACAGATAAGAGGAAGCGTTCAAGG
TAGCAGGTGATCACCAAGCAAAAAGCGACCGCACCGATCTATTCTTACTC
GGCCCGCCCACCCTCCGGTGCTCGCCCTCAACTACGACATAGACCAAGTG
CTTACCATGGCAGATCGATCCCTCACCACTGGCATGCGCACTCAGAGAGG
CGAATGGTTTCGCAGCGTTGCTCCTCCTGTCGTGGTGGTGTGTGCGTTGG
CAGGACTGGCCTCTGGCCTCTACATATTCCTAGGCACTAATCCATTTGTC
TATCGCGTTCCTCCTTCCGTAGAGGGGACTGGTATGGACGGGGGTCTGGA
GGGAGGGAGGGAGGAAAGGCGGGCGGGAGTGCAGGAGGGGAGAAAGAAGG
GAGAATGAAATAAATAGGGGGAGAGCATTTCTATAGAGGACATCAGCCAG
ACTAGACGGCACATAATGTGTTCCTCGTTCTCTAAACTCTCCTCTTCCCT
TCTCCCTCCTTCTCTCCTTCCCTCCTGCTCCCCCTTCTCCAGGAAAGCCC
AGCATGCAATGCAGCCTTTATCAAGACCCCACCGATCCTACGTCTATCAT
TAATATGCCCGATAAAGAGGTGTTTGACAGCAAGGATACCAAGTTCCCGG
CAGAGTTCGCGTGGGGTACGGCCACGAGTGCTTATCAGATAGAAGGAGCT
TGGGACGAGGATGGACGGGGAGAATCCATTTGGGACACGTTTGCGCATAC
AAAGGTGGGTAAGTGGGAGGGAGGGAGGGAGGGAAGGAGGGCCTTTATTG
GAGGAGGGCCAGGACTCAGGCTTTTGTTCCCTTTGTGCCTTCCCCTCCTC
GTATAGGGCAAGGTGGAGGGCAATCAGAACGGGGACGTGGCATGCGACCA
CTACCATCTCTACAAAGGTACGTATGCTCTCCTCTTTCCCCTCCTTCTTC
CCTCTTTCCCTTCCCTCTCTCCCTTTGTATGTCTGCTCCGATTCAATGGC
AATGGAGCGAAGGGTTGGGCTCTTGATCCTCTTTGACTCGCCCAGGATAC
TTCCCTCCCTCTCTCCTTACCCCCCTCCCCCCCTCCCTTGTAACGTTCCA
AACCACCATATTTCTCTCCCGTGTTTCTCTGCATCCACCCGTCCGCCCCT
CTTTCCCTCCCTCCCTCCCTCCCTCCCCCCCTCCCTCCCTTGCAGAGGAC
GTGGCCCTCATGAAGGAGCTTGGCATTAAACATTATCGATTCTCCATATC
TTGGTCTAGAATCATACCTGATGGCACGGGGAACGTCAATTTCAAGGTAA
GCCGTCTGTCCGTCCGTTCCTCCCTCCCTCTCTCCCTACTTCCTCCCTTT
GCTCCCTCTTTCCCTGCATGTATTTTTTCTTGGTCGCACATTTTCAAGAA
ATCGACCCTAACGACACCGCCCGCCCTCCCTCCGTCCCCCCCTCTTTCCC
TCCCTCCCTCCCTAGGGCCTGGAGTGGTACAGCGGCCTCGTGGACGAGTT
ATTAGCGAACGGCATTGAGCCCTACGTGACTCTCTATCACTGGGATCTAC
CGGAGAAACTGCAGGAGCGGCACCAGGGCTGGTGGTCGCAGGTGACGAGC
GACGCCTTTGCTGAGTATGCCGACATTGTCTTCAATCATTTGGGTGAGGG
AGGGCGGGAGGGAGGGAGAGCGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAAACATGTTGTCTGAAGCGTCGGGTCGTCTGAGAGGAGCC
TTTTGCCCTAAATGCAAATCTCCTTCCTTCTTCCCTCCCTTCCTCCCTCC
CTCCCTCCCTCCCCCTTTGGTCCTCAGGCGACCGTGTCAAGTATTGGATT
ACGTTAAACGAGCCCTGGTGCTCTGCCCTTCTAGGGTACGGCATCGGAGT
CCACGCTCCGGGTATCAAAAACATCAAGTCAGGTAAAACGCTCATCCTTT
GTTTCCCCTCGTTCTTCTCTCTCTTTCCCTCCCTCCCTCTCTTCCTCCGC
CCCACTGTCCCCTCGTGCCTTTCGCTCCATCAGGCTGCTTACGCATCTTC
CCCCACCTGCACCCCTCACTCCTTTCCTTCTTTCGCTCCCAAGGCGCCTA
CCTCGCGGGCCACAACCTCTTGCTCGCGCACTCCAAAGCCGTCAAGGTCT
ATAAAACCAAATACCAAGCAGCGCAAGGGGGAAAGATCGGGATCACCATC
AACAGTGATTACAAACAGGTAGGTAGGTAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGTATATCTCGAGCC
TGCGCTACTTTTCGCCTCCCCTCTTTGTTGATTCCTCCTGCCTGTCTCAT
TTCCATACAATCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCTTCAG
TGCGCCTGTGAAACGAGCCAGGACAAGGAGGCAGCGGAGAGGTCTCAGAT
CTTCGTCATGGGGTGGTTTGCCGACCCCGTGTTTTTTGGAGACTACCCGG
AAGAGATGCGGAAGACGGTAAGGAAGGAGGGAGGAAGGGCAGGAGGGCGG
GGGTGGGACGATAATGCTTTTGCGATTGCAGAAGGGTATCAGACACATTT
TGGTCTCTCCTCACCCTCCCTTTCCCCCTTCTTCCCTCCCTCCCCCTCTC
TCTCCCCCTCTCCCTCCTCCTGTAGTGCGGCGATCGCCTCCCCTCCTTCA
CGGCGGAAGAGAAAGCTAATCTGCGGGGTTCATTGGATTTCTTAGGCCTT
AATCATTACACCACGGCCTTGGTGTCACACCCACTCTTCCGCGCGAGTAG
TGGGAATTATTACACGGACATGGGCACTATGGATTCGTCGGATAAGGTGC
ATCTTCCCTCCCTCCCTCCCTCCCTCTCTTCCTTCCTTCTTTTCTCTCTT
TCTTTGTGTTCTATCCCCTCTCCACCCCCTCGCGCCCATTGAGCTCGCCA
AGTCGAATAATGGATGGAGAGGGAGGGAGAAAAGGAGAAAAGGAGGGAGG
GGACAAGGATGAGGGTCATATCCGTTAATTTGGGCATTTATTCACTCCTC
CCTCCCTTCCTCCCTCCCTCCCTCCTCCTCCCCCCTTCCTAGTCCTGGCC
TGTGGGTGAGTCCGGCTGGCTTAAGGATGTCCCCTGGGGATTCCGCAAGC
TCTTAGTCTGGATCAAGGCGCGGTACGTCCCTCCTTCCCTCCCTCCCTCC
CACCCTCCCTCCTTCCCTCCCTCTCTCCCTCCCTCCCTCCCATCCACCTT
TTCCTCTCACCTCCTTCCCCTTCCCCTCCTTCCCCTTCTCCTCCTTTCTT
CCCTCCCTCCCTCGCTTAGATACAACGATCCGATCATCTACATCACCGAA
AACGGCGTCTCGGGTCCCAAGGAAGATGAAGTTAAATCAGATGCAGAAGG
CTTGAACGACACCTTCCGTCAGGTGGGCCCTCCCTCCAACCCTCACTCGT
TCCTCCTTCCCCTTCCCTCCCGCTCTATCTTCCTCGTTCTTTCCCTCTCG
TCCTCCTGCCTTCTCTCTGTCTGCCGTACTCATCGACAAAAAATGACTTT
TATTCCCTCCCATCCCCACGTCATATCCATTTCCCTATATCATCCTTCAC
CTGCCTAATCTCAATCACGGCGTTTCCCTATATCACCACCACCTACAGAC
GTTTATGCAAGGCTATATCGCTGAGATGTACAAGGCCATCAAGTTCGACA
AGGTACGGCCCTTCCCTTCCTCCCTCCCTCCCTCCCTCACCTCCCTCGCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCTTCAGGTCAAGGGCGCAGGGTAT
TTCTACTGATCCTCTCTGTGTGCTTCGCATAATTTCCTCTAACCACTCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTTCCTTCCTCCCCCCCTCC
CTCTCTCTCTCCTTTCCTCAGGTTAATGTCGCAGGATATTTCTACTGGGC
TTTAATGGATAATTTCGAATGGGCCGACGGTTACCGCCCTCGTTTCGGGA
TCATCCGTGTGAATTTCACCAGCCAAGCTCGCTATCCTAAGGAAAGCGCA
CTCATGTATAAGGATATGATGACTCGTTTCTCACCTACCGAGGCCGTGCC
GGTCATCCCTACTACTCCTGCTGCTGGTGCAGCTGCTGCTGAAGAAGCAA
ATCCCGCTGGGCCTGTTGCACCTATAGCTCCGATTGGTGAAGATGTTTCT
CCTGCCCAGCCGGCCCGGGTGTCAGTAGTACCAGCAGCAGGCGCTCCTTC
TACTGTACAAGACGCTGCCACTGTTGCAGATTTACAAGAAGGACTTATCG
CTGCTGCTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCCGCTGATGCTGCTGCTGCTGATGCCTCAGCCGCTGCGCCTGTCAC
TCAGGGTGTTCCCATGGATAGTGCCGGTGTGGCCCAAACCCACGTGCTTG
CGGAAGAGCTTCAGGGATTCGAGGAGGGAGAGGAGGGAGTGATGGAGGTG
GAGGTGGGTGAGGAGGGAGGACAGCAACGATTGCGGAAGCTGTAGGAGAT
GGGTGAAAGAAAGGAATGAGGGAGGGAGGGAGGCAGGGGGATCGAAATTC
GTGTGATATATGATAATTCTTGTAGAGAGCTCAAAAAGAAGTAAAGACAG
TGTGAGAGTTCGCAATGTAATATA

Coding sequence (CDS) from alignment at chr4:1327447..1333120-

>NO04G04860.1 ID=NO04G04860.1|Name=NO04G04860.1|organism=Nannochloropsis oceanica|type=CDS|length=2106bp|location=Sequence derived from alignment at chr4:1327447..1333120- (Nannochloropsis oceanica)
ATGGCAGATCGATCCCTCACCACTGGCATGCGCACTCAGAGAGGCGAATG
GTTTCGCAGCGTTGCTCCTCCTGTCGTGGTGGTGTGTGCGTTGGCAGGAC
TGGCCTCTGGCCTCTACATATTCCTAGGCACTAATCCATTTGTCTATCGC
GTTCCTCCTTCCGTAGAGGGGACTGGAAAGCCCAGCATGCAATGCAGCCT
TTATCAAGACCCCACCGATCCTACGTCTATCATTAATATGCCCGATAAAG
AGGTGTTTGACAGCAAGGATACCAAGTTCCCGGCAGAGTTCGCGTGGGGT
ACGGCCACGAGTGCTTATCAGATAGAAGGAGCTTGGGACGAGGATGGACG
GGGAGAATCCATTTGGGACACGTTTGCGCATACAAAGGGCAAGGTGGAGG
GCAATCAGAACGGGGACGTGGCATGCGACCACTACCATCTCTACAAAGAG
GACGTGGCCCTCATGAAGGAGCTTGGCATTAAACATTATCGATTCTCCAT
ATCTTGGTCTAGAATCATACCTGATGGCACGGGGAACGTCAATTTCAAGG
GCCTGGAGTGGTACAGCGGCCTCGTGGACGAGTTATTAGCGAACGGCATT
GAGCCCTACGTGACTCTCTATCACTGGGATCTACCGGAGAAACTGCAGGA
GCGGCACCAGGGCTGGTGGTCGCAGGTGACGAGCGACGCCTTTGCTGAGT
ATGCCGACATTGTCTTCAATCATTTGGGCGACCGTGTCAAGTATTGGATT
ACGTTAAACGAGCCCTGGTGCTCTGCCCTTCTAGGGTACGGCATCGGAGT
CCACGCTCCGGGTATCAAAAACATCAAGTCAGGCGCCTACCTCGCGGGCC
ACAACCTCTTGCTCGCGCACTCCAAAGCCGTCAAGGTCTATAAAACCAAA
TACCAAGCAGCGCAAGGGGGAAAGATCGGGATCACCATCAACAGTGATTA
CAAACAGTGCGCCTGTGAAACGAGCCAGGACAAGGAGGCAGCGGAGAGGT
CTCAGATCTTCGTCATGGGGTGGTTTGCCGACCCCGTGTTTTTTGGAGAC
TACCCGGAAGAGATGCGGAAGACGTGCGGCGATCGCCTCCCCTCCTTCAC
GGCGGAAGAGAAAGCTAATCTGCGGGGTTCATTGGATTTCTTAGGCCTTA
ATCATTACACCACGGCCTTGGTGTCACACCCACTCTTCCGCGCGAGTAGT
GGGAATTATTACACGGACATGGGCACTATGGATTCGTCGGATAAGTCCTG
GCCTGTGGGTGAGTCCGGCTGGCTTAAGGATGTCCCCTGGGGATTCCGCA
AGCTCTTAGTCTGGATCAAGGCGCGATACAACGATCCGATCATCTACATC
ACCGAAAACGGCGTCTCGGGTCCCAAGGAAGATGAAGTTAAATCAGATGC
AGAAGGCTTGAACGACACCTTCCGTCAGACGTTTATGCAAGGCTATATCG
CTGAGATGTACAAGGCCATCAAGTTCGACAAGGTTAATGTCGCAGGATAT
TTCTACTGGGCTTTAATGGATAATTTCGAATGGGCCGACGGTTACCGCCC
TCGTTTCGGGATCATCCGTGTGAATTTCACCAGCCAAGCTCGCTATCCTA
AGGAAAGCGCACTCATGTATAAGGATATGATGACTCGTTTCTCACCTACC
GAGGCCGTGCCGGTCATCCCTACTACTCCTGCTGCTGGTGCAGCTGCTGC
TGAAGAAGCAAATCCCGCTGGGCCTGTTGCACCTATAGCTCCGATTGGTG
AAGATGTTTCTCCTGCCCAGCCGGCCCGGGTGTCAGTAGTACCAGCAGCA
GGCGCTCCTTCTACTGTACAAGACGCTGCCACTGTTGCAGATTTACAAGA
AGGACTTATCGCTGCTGCTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCCGCTGATGCTGCTGCTGCTGATGCCTCAGCCGCT
GCGCCTGTCACTCAGGGTGTTCCCATGGATAGTGCCGGTGTGGCCCAAAC
CCACGTGCTTGCGGAAGAGCTTCAGGGATTCGAGGAGGGAGAGGAGGGAG
TGATGGAGGTGGAGGTGGGTGAGGAGGGAGGACAGCAACGATTGCGGAAG
CTGTAG

Synonyms

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