NO04G04270.1, NO04G04270.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO04G04270.1
Unique NameNO04G04270.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length495
Alignment locationchr4:1157800..1158662 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1157800..1158662 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G04270.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04270NO04G04270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO04G04270.1NO04G04270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO04G04270.1.cds1NO04G04270.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO04G04270.1.cds2NO04G04270.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO04G04270.1 ID=NO04G04270.1|Name=NO04G04270.1|organism=Nannochloropsis oceanica|type=mRNA|length=495bp
ATGGAAGAAGGAGTGGAAAACAAAGCAAGCGTGGTTGAGCAAACCGCAGC
GGCCTGCACCACGTTTCGTCAATGGCTGCATATCCGTTACCGAATGGATG
AGAGTAAGACAAAAGGGCAGCTCTCGTGCGTCCCATCTTCTTCCTCCTCC
TCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTTCTT
TTCATCCTCTTCTTCCTCCTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCT
CCTTCTCCTTCTCCTTCTCCTCCTCCTCCTCTTCCTCTTCCTCTGCTGCA
TATCCCCTCCTTTTTGGCAGGCAAGGCAGCGCGGTTGGACGAGGAGGAAG
AGGGGAAGAAAGGGAGGGAGGAAGAGGAAATCAGGACTGTCCTGCGGGCG
ATTCGATGGCGAGATTAGATGCATGGGAACAGAAGAAGGAAGCAGGGGAA
CAGCAGGAGGAGGAAGAGGAGGGAGAGAGCAAGAAGAAGATGTAG
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protein sequence of NO04G04270.1

>NO04G04270.1-protein ID=NO04G04270.1-protein|Name=NO04G04270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=165bp
MEEGVENKASVVEQTAAACTTFRQWLHIRYRMDESKTKGQLSCVPSSSSS
SSSSFSSSSSSSSSSFFSSSSSSSSSSSSSSSSSFSFSFSSSSSSSSSAA
YPLLFGRQGSAVGRGGRGEEREGGRGNQDCPAGDSMARLDAWEQKKEAGE
QQEEEEEGESKKKM*
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mRNA from alignment at chr4:1157800..1158662-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO04G04270.1 ID=NO04G04270.1|Name=NO04G04270.1|organism=Nannochloropsis oceanica|type=mRNA|length=863bp|location=Sequence derived from alignment at chr4:1157800..1158662- (Nannochloropsis oceanica)
ATGGAAGAAGGAGTGGAAAACAAAGCAAGCGTGGTTGAGCAAACCGCAGC
GGCCTGCACCACGTTTCGTCAATGGCTGCATATCCGTTACCGAATGGATG
AGAGTAAGGTGCGAAAAATGACAGAGCCGAACTGATTGATTTGGGGAGAG
GATTAGGAGGTTGTGAAGAGGAAGATGTAGAGTGGGGTAAGGAGGGAGGG
GAGGAGGAAGTGGTGTGTGGACAGGAGGGAACGAGGGGAGGTGGAGGTGA
AGGAGCAAGAGGAAGAGGTGGGATGGTAGAGGGATAGATGCCTTTGGCGG
ATGCTGGTGATTGCGGTGGAGGAAGTGAAGGATGAGGAGGGCGGATGGCG
GAAGATGACGGAGGAGAGGAAGATGGCTGGAAGGAAGACAGGGGGAGGAG
AGATAAACGAAGAAAGCAGCAGCATCATCAGGAGAAGGAGGAACAAACAT
TATGATGGGCTTTCGTGTATCGGAAGACAAAAGGGCAGCTCTCGTGCGTC
CCATCTTCTTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTC
CTCCTCTTCTTCTTTCTTTTCATCCTCTTCTTCCTCCTCTTCTTCTTCTT
CTTCTTCCTCCTCCTCCTCCTTCTCCTTCTCCTTCTCCTCCTCCTCCTCT
TCCTCTTCCTCTGCTGCATATCCCCTCCTTTTTGGCAGGCAAGGCAGCGC
GGTTGGACGAGGAGGAAGAGGGGAAGAAAGGGAGGGAGGAAGAGGAAATC
AGGACTGTCCTGCGGGCGATTCGATGGCGAGATTAGATGCATGGGAACAG
AAGAAGGAAGCAGGGGAACAGCAGGAGGAGGAAGAGGAGGGAGAGAGCAA
GAAGAAGATGTAG
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Coding sequence (CDS) from alignment at chr4:1157800..1158662-

>NO04G04270.1 ID=NO04G04270.1|Name=NO04G04270.1|organism=Nannochloropsis oceanica|type=CDS|length=495bp|location=Sequence derived from alignment at chr4:1157800..1158662- (Nannochloropsis oceanica)
ATGGAAGAAGGAGTGGAAAACAAAGCAAGCGTGGTTGAGCAAACCGCAGC
GGCCTGCACCACGTTTCGTCAATGGCTGCATATCCGTTACCGAATGGATG
AGAGTAAGACAAAAGGGCAGCTCTCGTGCGTCCCATCTTCTTCCTCCTCC
TCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTTCTT
TTCATCCTCTTCTTCCTCCTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCT
CCTTCTCCTTCTCCTTCTCCTCCTCCTCCTCTTCCTCTTCCTCTGCTGCA
TATCCCCTCCTTTTTGGCAGGCAAGGCAGCGCGGTTGGACGAGGAGGAAG
AGGGGAAGAAAGGGAGGGAGGAAGAGGAAATCAGGACTGTCCTGCGGGCG
ATTCGATGGCGAGATTAGATGCATGGGAACAGAAGAAGGAAGCAGGGGAA
CAGCAGGAGGAGGAAGAGGAGGGAGAGAGCAAGAAGAAGATGTAG
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Synonyms
Publications